BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035645
(217 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224144668|ref|XP_002325369.1| predicted protein [Populus trichocarpa]
gi|222862244|gb|EEE99750.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 173/215 (80%), Positives = 198/215 (92%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KGFNPPVRGRDLL++GLLNAGYLESAK MV +M+K+G PD+ TFNS++E IC +GE
Sbjct: 207 MSKKGFNPPVRGRDLLIEGLLNAGYLESAKDMVRRMMKEGLVPDVNTFNSMVEAICNAGE 266
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+FCV+MY+SVCKLG C D+++YKILIPAVSK G IDEAFRLLHNL+EDGH PFPSLYAP
Sbjct: 267 VDFCVDMYHSVCKLGFCPDINSYKILIPAVSKVGRIDEAFRLLHNLIEDGHKPFPSLYAP 326
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG FRRGQFDDAFCFFSE+K+KGHPPNRPVYT +ITMCGRGG+ VEAANYL+EMTE+G
Sbjct: 327 IIKGMFRRGQFDDAFCFFSEMKVKGHPPNRPVYTMMITMCGRGGKHVEAANYLVEMTEIG 386
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
L PISRCFD+VTDGLKNCGKHDLA++IEQLEVSLR
Sbjct: 387 LVPISRCFDMVTDGLKNCGKHDLAKRIEQLEVSLR 421
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 1/159 (0%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLH 104
+T S+IE K G ++ VE++ + +C +V Y L+ A+ + M A+ L+
Sbjct: 111 DTVCSIIEEYGKHGLIDQAVEVFNKCSRSLNCQHNVCVYNSLLFALCEVKMFHGAYALVR 170
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
++ G P Y ++ G G+ +A F E+ KG P LI G
Sbjct: 171 RMIRKGIVPDKRTYGVLVNGWCSSGKLREAKGFLEEMSKKGFNPPVRGRDLLIEGLLNAG 230
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
A + + M + GL P F+ + + + N G+ D
Sbjct: 231 YLESAKDMVRRMMKEGLVPDVNTFNSMVEAICNAGEVDF 269
>gi|255562047|ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 451
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 194/217 (89%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KGFNPPVRGRDLL++GLLNAGY ESAK+MV KM K+G PD+ TFN LIE IC SGE
Sbjct: 235 MSKKGFNPPVRGRDLLIEGLLNAGYFESAKEMVFKMSKEGFVPDVNTFNCLIEAICNSGE 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+FCV+MYYS+ KLG C D+++YKILIPAVSK G IDEAF+LL+N +EDGH PFP LYAP
Sbjct: 295 VDFCVDMYYSLRKLGFCPDINSYKILIPAVSKVGKIDEAFKLLNNSIEDGHKPFPGLYAP 354
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG RRGQFDDAFCFF E+K+KGHPPNRPVYT LITMCGRGG++VEAANYL+EMTEMG
Sbjct: 355 IIKGMCRRGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRGGKYVEAANYLVEMTEMG 414
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
LTPISRCFD+VTDGLKNCGKHDLA++IEQLEVS+ SV
Sbjct: 415 LTPISRCFDMVTDGLKNCGKHDLAKRIEQLEVSVCSV 451
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDL--ETFNSLIETICKSGEVEFCVEMYYSVCK 73
L++ L + S +++ +M Q + ET S+IE +SG ++ VE++
Sbjct: 108 LIKILAKSKRYSSMWKLITQMKDQNPQFSISSETVRSIIEEYGRSGLIDQAVEVFNQCNS 167
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
L +V Y L+ A+ + + A+ L+ L+ G P + Y+ ++ G G+F +
Sbjct: 168 LNCEQNVDIYNSLLFALCEVKLFHGAYALVRRLIRKGLAPNKTTYSVLVNGWCSNGKFKE 227
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ KG P LI G F A + +M++ G P F+ + +
Sbjct: 228 AQLFLEEMSKKGFNPPVRGRDLLIEGLLNAGYFESAKEMVFKMSKEGFVPDVNTFNCLIE 287
Query: 194 GLKNCGKHDL 203
+ N G+ D
Sbjct: 288 AICNSGEVDF 297
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 75/185 (40%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G ++ A ++ N+ + +++ +NSL+ +C+ + + + G + +T
Sbjct: 152 SGLIDQAVEVFNQCNSLNCEQNVDIYNSLLFALCEVKLFHGAYALVRRLIRKGLAPNKTT 211
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y +L+ G EA L + + G NP +I+G G F+ A ++
Sbjct: 212 YSVLVNGWCSNGKFKEAQLFLEEMSKKGFNPPVRGRDLLIEGLLNAGYFESAKEMVFKMS 271
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ + LI G + + ++G P + ++ + GK D
Sbjct: 272 KEGFVPDVNTFNCLIEAICNSGEVDFCVDMYYSLRKLGFCPDINSYKILIPAVSKVGKID 331
Query: 203 LAEKI 207
A K+
Sbjct: 332 EAFKL 336
>gi|449449535|ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
gi|449518358|ref|XP_004166209.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 167/217 (76%), Positives = 190/217 (87%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KGFNPP+RGRDLLV+GLLNAGYLESAK MV KM K+GS PD+ TFNSLI+ IC SGE
Sbjct: 239 MSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSGE 298
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+FC+ +++ VCKLG C D++TYKILIPA SK G IDEAFRLLH +EDGH PFPSLY P
Sbjct: 299 VDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYGP 358
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+KG +RGQFDDAFCFF ++K KGHPPNRPVYT LITMCGRGGRFV+AANYLMEM E+G
Sbjct: 359 ILKGMCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELG 418
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
L PISRCFD+VTDGLKNCGKHDLA+KIEQLEVS+R +
Sbjct: 419 LPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 455
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 1/206 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ + P + LV+ L + +++ +M Q ET + +I+ K G V+
Sbjct: 100 NPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVD 159
Query: 63 FCVEMYYSVCKLGSCAD-VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
V ++ K C V Y L+ A+ + M A+ L+ ++ G P Y +
Sbjct: 160 NAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTL 219
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G G+ +A F E+ KG P L+ G A + + +MT+ G
Sbjct: 220 VTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGS 279
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
P F+ + D + N G+ D I
Sbjct: 280 VPDIGTFNSLIDVICNSGEVDFCINI 305
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 79/194 (40%), Gaps = 1/194 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPD-LETFNSLIETICKSGEVEFCVEMYYSVCK 73
++Q G +++A + N+ K P +E +N+L+ +C+ + + +
Sbjct: 147 FIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIR 206
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY L+ AG + EA L + + G NP +++G G +
Sbjct: 207 KGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLES 266
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ +G P+ + +LI + G N E+ ++GL P + ++
Sbjct: 267 AKDMVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIP 326
Query: 194 GLKNCGKHDLAEKI 207
G+ D A ++
Sbjct: 327 ATSKVGRIDEAFRL 340
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 361 bits (927), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 187/217 (86%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KGFNPPVRGRDLLV GLLNAGYLE+AK+MV KM K+G PD+ET NS++E ICK+GE
Sbjct: 238 MSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGE 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
EFC+++Y VC+LG +V TYKI+IPA K G IDEAFR+LH +EDGH PFPSLYAP
Sbjct: 298 AEFCIDIYNDVCRLGVSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAP 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK R GQFDDAFCFFS++K+KGHPPNRPVYT LITMCGRGGRFV+AANYL+EMTE+
Sbjct: 358 IIKALCRNGQFDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTELN 417
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
LTPISRCFD+VTDGLKNCGKHDLA KIEQLEVSLR V
Sbjct: 418 LTPISRCFDMVTDGLKNCGKHDLARKIEQLEVSLRGV 454
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
P + L++T+ ++ + + ++ + + L S +I K G++D+A
Sbjct: 107 QPTTLEYEELLKTLARTKQFQPMWKIAHQMQTLSPTVVSS----IIEEFGKHGLVDQAVE 162
Query: 102 LLHNLVEDGHNPFP-SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+ + + P +Y ++ F A+ + KG PN+ Y+ L+
Sbjct: 163 VFNKAKSALNCPQTIEVYNSLLFALCEVKYFHGAYALIRRMIRKGVTPNKQTYSVLVNGW 222
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ EA ++L EM+ G P R DL+ DGL N G + A+++
Sbjct: 223 CAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEM 269
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 74/185 (40%), Gaps = 1/185 (0%)
Query: 24 GYLESAKQMVNKMIKQGSDPD-LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
G ++ A ++ NK + P +E +NSL+ +C+ + + + G + T
Sbjct: 155 GLVDQAVEVFNKAKSALNCPQTIEVYNSLLFALCEVKYFHGAYALIRRMIRKGVTPNKQT 214
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y +L+ AG + EA L + G NP ++ G G + A ++
Sbjct: 215 YSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEMVRKMT 274
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ +++ + G + ++ +G++P + ++ G+ D
Sbjct: 275 KEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLGVSPNVGTYKIMIPAACKEGRID 334
Query: 203 LAEKI 207
A +I
Sbjct: 335 EAFRI 339
>gi|297807861|ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317651|gb|EFH48073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/217 (77%), Positives = 187/217 (86%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KGFNPP RGRDLL++GLLNAGYLESAK++V+KM K G PD+ TFN+LIE I KSGE
Sbjct: 243 MSRKGFNPPARGRDLLIEGLLNAGYLESAKEIVDKMTKGGFVPDILTFNTLIEAISKSGE 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VEFC+EMYY+ CKLG C D+ TYK LIPAVSK G IDEAFRLL+N VEDGH PFPSLYAP
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG R G FDDAF FFS++K+K HPPNRPVYT LITMCGRGG+FV+AANYL+EMTEMG
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
L PISRCFD+VTDGLKN GKHDLA +IEQLEV LR V
Sbjct: 423 LVPISRCFDMVTDGLKNSGKHDLAMRIEQLEVQLRGV 459
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 1/200 (0%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S+ + P + L + L + ES +++ +M D ET +IE K+G V
Sbjct: 103 SNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHV 162
Query: 62 EFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE++ V K LG V Y L+ A+ M A+ L+ ++ G P YA
Sbjct: 163 DQAVELFNGVPKTLGCQQTVDVYNALLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAI 222
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +A F E+ KG P LI G A + +MT+ G
Sbjct: 223 LVNGWCSAGKMKEAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEIVDKMTKGG 282
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P F+ + + + G+
Sbjct: 283 FVPDILTFNTLIEAISKSGE 302
>gi|15238810|ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g18390, mitochondrial; Flags: Precursor
gi|332005166|gb|AED92549.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 168/217 (77%), Positives = 187/217 (86%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +GFNPP RGRDLL++GLLNAGYLESAK+MV+KM K G PD++TFN LIE I KSGE
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VEFC+EMYY+ CKLG C D+ TYK LIPAVSK G IDEAFRLL+N VEDGH PFPSLYAP
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG R G FDDAF FFS++K+K HPPNRPVYT LITMCGRGG+FV+AANYL+EMTEMG
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
L PISRCFD+VTDGLKN GKHDLA +IEQLEV LR V
Sbjct: 423 LVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQLRGV 459
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S+ + P + L + L + ES +++ +M D ET +IE K+G V
Sbjct: 103 SNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHV 162
Query: 62 EFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE++ V K LG V Y L+ A+ M A+ L+ ++ G P YA
Sbjct: 163 DQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAI 222
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +A F E+ +G P LI G A + +MT+ G
Sbjct: 223 LVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGG 282
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + F+++ + + G+
Sbjct: 283 FVPDIQTFNILIEAISKSGE 302
>gi|356510681|ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Glycine max]
Length = 450
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 159/217 (73%), Positives = 189/217 (87%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KGFNPPVRGRDLLV+GLLNAGY+ESAK MV MIKQGS PD+ TFN+++ET+ K +
Sbjct: 235 MSEKGFNPPVRGRDLLVEGLLNAGYVESAKGMVRNMIKQGSVPDVGTFNAVVETVSKE-D 293
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+FCV +Y+ VC LG DV+TYKIL+PAVSK+GM+DEAFRLL+N +EDGH PFPSLYAP
Sbjct: 294 VQFCVGLYHEVCALGMAPDVNTYKILVPAVSKSGMVDEAFRLLNNFIEDGHKPFPSLYAP 353
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK RRGQFDDAFCFF ++K K HPPNRP+YT LITMCGR G+FVEAANY+ EMTEMG
Sbjct: 354 VIKALCRRGQFDDAFCFFGDMKAKAHPPNRPLYTMLITMCGRAGKFVEAANYIFEMTEMG 413
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
L PISRCFD+VTDGLKNCGKHDLA ++++LEVS+R V
Sbjct: 414 LVPISRCFDMVTDGLKNCGKHDLARRVQELEVSIRGV 450
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%)
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
LY +++ F A+ + KG P++ Y L+ G+ EA +L EM
Sbjct: 176 LYNALLRSLCHNKLFHGAYALVRRMLRKGLRPDKTTYAVLVNAWCSNGKLREAKLFLEEM 235
Query: 177 TEMGLTPISRCFDLVTDGLKNCG 199
+E G P R DL+ +GL N G
Sbjct: 236 SEKGFNPPVRGRDLLVEGLLNAG 258
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 66/194 (34%), Gaps = 34/194 (17%)
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
L +N+L+ ++C + + + + G D +TY +L+ A G + EA L
Sbjct: 174 LPLYNALLRSLCHNKLFHGAYALVRRMLRKGLRPDKTTYAVLVNAWCSNGKLREAKLFLE 233
Query: 105 NLVEDGHNP------------FPSLYAPIIKGAFRR----------GQF----------D 132
+ E G NP + Y KG R G F D
Sbjct: 234 EMSEKGFNPPVRGRDLLVEGLLNAGYVESAKGMVRNMIKQGSVPDVGTFNAVVETVSKED 293
Query: 133 DAFC--FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
FC + E+ G P+ Y L+ + G EA L E G P +
Sbjct: 294 VQFCVGLYHEVCALGMAPDVNTYKILVPAVSKSGMVDEAFRLLNNFIEDGHKPFPSLYAP 353
Query: 191 VTDGLKNCGKHDLA 204
V L G+ D A
Sbjct: 354 VIKALCRRGQFDDA 367
>gi|13899129|gb|AAK48986.1|AF370559_1 Unknown protein [Arabidopsis thaliana]
gi|27311979|gb|AAO00955.1| Unknown protein [Arabidopsis thaliana]
Length = 186
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 143/186 (76%), Positives = 158/186 (84%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
MV+KM K G PD++TFN LIE I KSGEVEFC+EMYY+ CKLG C D+ TYK LIPAVS
Sbjct: 1 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K G IDEAFRLL+N VEDGH PFPSLYAPIIKG R G FDDAF FFS++K+K HPPNRP
Sbjct: 61 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
VYT LITMCGRGG+FV+AANYL+EMTEMGL PISRCFD+VTDGLKN GKHDLA +IEQLE
Sbjct: 121 VYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLE 180
Query: 212 VSLRSV 217
V LR V
Sbjct: 181 VQLRGV 186
>gi|356528050|ref|XP_003532618.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18390, mitochondrial-like [Glycine max]
Length = 304
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 139/223 (62%), Positives = 166/223 (74%), Gaps = 10/223 (4%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAK---------QMVNKMIKQGSDPDLETFNSLIET 54
KG P LL+ + G L AK +MV MIKQGS PD+ TFN+++ET
Sbjct: 83 KGLCPDKTTYALLINAWCSNGKLREAKLFLREMSEKEMVRSMIKQGSVPDVGTFNAVVET 142
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+ K V+FCV++Y+ VC LG DV+TYKIL+P VSK GMIDEAFRLL+N V+DGH PF
Sbjct: 143 VSKEN-VQFCVDLYHEVCALGMAPDVNTYKILVPTVSKDGMIDEAFRLLNNFVDDGHKPF 201
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
PSLYAP+IK RGQFDDAFCFF ++K K HPPNRP+YT LITMCGR G+FVE ANY+
Sbjct: 202 PSLYAPVIKALCSRGQFDDAFCFFGDMKAKAHPPNRPLYTMLITMCGRAGKFVEVANYIF 261
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
EMTEMGL PISRCFD+VTDGLKNCGKHDLA K+++ EVS+R V
Sbjct: 262 EMTEMGLVPISRCFDMVTDGLKNCGKHDLAGKVQEWEVSIRGV 304
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 162/214 (75%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++GF+PPVRGRDLLV GL+ AG LE AK +M K+G PD+ TFNSL E +C SG+
Sbjct: 249 MAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGD 308
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VEF V + G C D+STYK++IPAV+KAG IDEAFRL + +EDGH PFPSLYA
Sbjct: 309 VEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAA 368
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK + G+F DAF FF ++K KGHPPNRPVY L+ MC RGGRFVEAANYL+EM+E G
Sbjct: 369 IIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAG 428
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P + F+ V DGL++CGKHDLA+++EQLE+S+
Sbjct: 429 FAPRAPTFNSVVDGLRHCGKHDLAQRMEQLEMSM 462
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 80/181 (44%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ A ++ N++ + G + +N+L++ +C +G ++ + + G D +T+ L
Sbjct: 170 DQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTL 229
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ A AG + EA L ++ E G +P ++ G R G+ ++A F + +G
Sbjct: 230 VDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGV 289
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P+ + +L G A L + + GL P + ++ + G+ D A +
Sbjct: 290 LPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFR 349
Query: 207 I 207
+
Sbjct: 350 L 350
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
TF+++I + +S + VE++ + + G Y L+ A+ G A++LL
Sbjct: 154 STFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRR 213
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGG 164
+ G P + ++ ++ G+ +A F ++ +G HPP R L+ R G
Sbjct: 214 MARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRG-RDLLVDGLVRAG 272
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
R EA + + MT+ G+ P F+ + + L + G + A
Sbjct: 273 RLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFA 312
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%)
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG ST+ +I + ++ + D+A + + L G +Y ++ G F
Sbjct: 147 LGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAG 206
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ + KG P+R ++TL+ G+ EA +L +M E G P R DL+ D
Sbjct: 207 AYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVD 266
Query: 194 GLKNCGK 200
GL G+
Sbjct: 267 GLVRAGR 273
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 162/214 (75%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++GF+PPVRGRDLLV GL+ AG LE AK +M K+G PD+ TFNSL E +C SG+
Sbjct: 245 MAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGD 304
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VEF V + G C D+STYK++IPAV+KAG IDEAFRL + +EDGH PFPSLYA
Sbjct: 305 VEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAA 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK + G+F DAF FF ++K KGHPPNRPVY L+ MC RGGRFVEAANYL+EM+E G
Sbjct: 365 IIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAG 424
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P + F+ V DGL++CGKHDLA+++EQLE+S+
Sbjct: 425 FAPRAPTFNSVVDGLRHCGKHDLAQRMEQLEMSM 458
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 80/181 (44%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ A ++ N++ + G + +N+L++ +C +G ++ + + G D +T+ L
Sbjct: 166 DQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTL 225
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ A AG + EA L ++ E G +P ++ G R G+ ++A F + +G
Sbjct: 226 VDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGV 285
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P+ + +L G A L + + GL P + ++ + G+ D A +
Sbjct: 286 LPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFR 345
Query: 207 I 207
+
Sbjct: 346 L 346
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
TF+++I + +S + VE++ + + G Y L+ A+ G A++LL
Sbjct: 150 STFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRR 209
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGG 164
+ G P + ++ ++ G+ +A F ++ +G HPP R L+ R G
Sbjct: 210 MARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRG-RDLLVDGLVRAG 268
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
R EA + + MT+ G+ P F+ + + L + G + A
Sbjct: 269 RLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFA 308
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%)
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG ST+ +I + ++ + D+A + + L G +Y ++ G F
Sbjct: 143 LGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAG 202
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ + KG P+R ++TL+ G+ EA +L +M E G P R DL+ D
Sbjct: 203 AYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVD 262
Query: 194 GLKNCGK 200
GL G+
Sbjct: 263 GLVRAGR 269
>gi|413921612|gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
Length = 456
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 159/215 (73%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G PPVRGRDLLV GL+ AG+LE AK +M K+G PD+ TFNSL E +C +G+
Sbjct: 240 MAGRGLRPPVRGRDLLVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGD 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+F V + G C D+STYK+++PAV+K G I+EAFRL + VEDGH PFPSLYA
Sbjct: 300 VDFAVSLLADASSRGLCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAA 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK + G+F DAF FF ++K KGHPPNRPVY L+ MC RGGRFVEAANYL+EM+E G
Sbjct: 360 IIKALCKAGRFADAFAFFGDMKTKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAG 419
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
TP + F V DGL++CGKHDLA ++EQLEVSL+
Sbjct: 420 FTPRAPTFSAVVDGLRHCGKHDLARRLEQLEVSLK 454
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 73/174 (41%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ A ++ N++ + G E +N+L++ +C +G ++ + + G D +T+ L
Sbjct: 161 DQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRMARKGVAPDRATFSTL 220
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ + AG + EA L ++ G P ++ G R G + A F + +G
Sbjct: 221 VDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLEQAKAFALRMTKEGI 280
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
P+ + +L G A + L + + GL P + ++ + GK
Sbjct: 281 LPDVATFNSLAEALCNAGDVDFAVSLLADASSRGLCPDISTYKVMLPAVAKVGK 334
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 68/158 (43%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TF+++I + S + VE++ + + G Y L+ A+ G A++LL +
Sbjct: 146 TFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRM 205
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G P + ++ ++ G+ +A F ++ +G P L+ R G
Sbjct: 206 ARKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHL 265
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+A + + MT+ G+ P F+ + + L N G D A
Sbjct: 266 EQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFA 303
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%)
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG +T+ +I + + + D+A + + L G +Y ++ G F
Sbjct: 138 LGLPLSPTTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTG 197
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ + KG P+R ++TL+ G+ EA +L +M GL P R DL+ D
Sbjct: 198 AYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVD 257
Query: 194 GLKNCGKHDLAE 205
GL G + A+
Sbjct: 258 GLVRAGHLEQAK 269
>gi|259489858|ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea mays]
gi|223943533|gb|ACN25850.1| unknown [Zea mays]
Length = 322
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 159/215 (73%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G PPVRGRDLLV GL+ AG+LE AK +M K+G PD+ TFNSL E +C +G+
Sbjct: 106 MAGRGLRPPVRGRDLLVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGD 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+F V + G C D+STYK+++PAV+K G I+EAFRL + VEDGH PFPSLYA
Sbjct: 166 VDFAVSLLADASSRGLCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAA 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK + G+F DAF FF ++K KGHPPNRPVY L+ MC RGGRFVEAANYL+EM+E G
Sbjct: 226 IIKALCKAGRFADAFAFFGDMKTKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAG 285
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
TP + F V DGL++CGKHDLA ++EQLEVSL+
Sbjct: 286 FTPRAPTFSAVVDGLRHCGKHDLARRLEQLEVSLK 320
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ A ++ N++ + G E +N+L++ +C +G ++ + + G D +T+ L
Sbjct: 27 DQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRMARKGVAPDRATFSTL 86
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ + AG + EA L ++ G P ++ G R G + A F + +G
Sbjct: 87 VDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLEQAKAFALRMTKEGI 146
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P+ + +L G A + L + + GL P + ++ + GK + A +
Sbjct: 147 LPDVATFNSLAEALCNAGDVDFAVSLLADASSRGLCPDISTYKVMLPAVAKVGKIEEAFR 206
Query: 207 I 207
+
Sbjct: 207 L 207
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 68/158 (43%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TF+++I + S + VE++ + + G Y L+ A+ G A++LL +
Sbjct: 12 TFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRM 71
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G P + ++ ++ G+ +A F ++ +G P L+ R G
Sbjct: 72 ARKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHL 131
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+A + + MT+ G+ P F+ + + L N G D A
Sbjct: 132 EQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFA 169
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%)
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
+T+ +I + + + D+A + + L G +Y ++ G F A+
Sbjct: 11 TTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRR 70
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ KG P+R ++TL+ G+ EA +L +M GL P R DL+ DGL G
Sbjct: 71 MARKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGH 130
Query: 201 HDLAE 205
+ A+
Sbjct: 131 LEQAK 135
>gi|326513918|dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 160/215 (74%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +GF PPVRGRDLLV GL+ AG LE AK ++ K+G PD+ TFNSL + +C +G+
Sbjct: 243 MATRGFRPPVRGRDLLVDGLVRAGRLEEAKAFALRITKEGVLPDVATFNSLAQALCDAGD 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VEF V + G C D+STYK+++PAV+KAG I+EAFRL + +EDGH PFPSLYA
Sbjct: 303 VEFAVGLLADASSRGMCPDISTYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAA 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+K + G+F DAF FF ++K KGHPPNRPVY L+ MC RGGRF++AANYL+EM+E G
Sbjct: 363 IVKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLLEMSEAG 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P + F++V DGL++ GKHDLA ++EQLE+SL+
Sbjct: 423 FAPRAPTFNVVVDGLRHLGKHDLARRMEQLEMSLK 457
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG +T+ +I + + + ++A + + L G +Y ++ G F
Sbjct: 141 LGLPLSPATFSAVISSYGHSRLAEQAVEVFNRLPHFGCPQTTEVYNALLDALCANGNFAG 200
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ + KG P+R ++TL+ G+ EA +L +M G P R DL+ D
Sbjct: 201 AYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMATRGFRPPVRGRDLLVD 260
Query: 194 GLKNCGK 200
GL G+
Sbjct: 261 GLVRAGR 267
>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 158/215 (73%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +GF PPVRGRDLLV GL+ AG LE AK + K+G PD+ TFNSL + +C +G+
Sbjct: 248 MASRGFRPPVRGRDLLVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALCDAGD 307
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+F V + G C D+STYK+++PAV+KAG I+EAFRL + VEDGH PFPSLYA
Sbjct: 308 VKFAVGLLADASSRGLCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAA 367
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+K + G+F DAF FF ++K KGHPPNRPVY L+ MC RGGRF++AANYL+EM+E G
Sbjct: 368 IVKALCKAGRFGDAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLVEMSEAG 427
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P F+ V DGL++ GKHDLA+++EQLE+SL+
Sbjct: 428 FAPRVPTFNAVVDGLRHLGKHDLAQRMEQLEMSLK 462
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ A L +A+ + K P E F++L+ + ++ + LG
Sbjct: 88 VIKAAAPAEPLHAARFLAWLRAKPNFSPSAEHFDALLLPLARARLFTHLWTQASDMRALG 147
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+T+ +I + + + ++A + + L G +Y ++ G F A+
Sbjct: 148 LPLSPATFSAVISSYGHSRLPEQAVEVFNRLPHFGCPQTTEVYNALLDALCSNGNFAGAY 207
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ KG P+R ++TL+ G+ EA +L +M G P R DL+ DGL
Sbjct: 208 KLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMASRGFRPPVRGRDLLVDGL 267
Query: 196 KNCGK 200
G+
Sbjct: 268 VRAGR 272
>gi|147857907|emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
Length = 356
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 146/212 (68%), Gaps = 13/212 (6%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L Y A ++ +MI++G P+ +T++ L+ C +G+++ + + + G
Sbjct: 140 LLFALCEVKYFHGAYALIRRMIRKGVTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKG 199
Query: 76 SCADVSTYKILIPAVSKAGMIDEA-------------FRLLHNLVEDGHNPFPSLYAPII 122
V +L+ + AG ++ A FR+LH +EDGH PFPSLYAPII
Sbjct: 200 FNPPVRGRDLLVDGLLNAGYLEAAKEMLAKRVELMRPFRILHRSIEDGHRPFPSLYAPII 259
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
K R GQFDDAFCFFS++K+KGHPPNRPVYT LITMCGRGGRFV+AANYL+EMTE+ LT
Sbjct: 260 KALCRNGQFDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTELNLT 319
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
PISRCFD+VTDGLKNCGKHDLA KIEQLEVSL
Sbjct: 320 PISRCFDMVTDGLKNCGKHDLARKIEQLEVSL 351
>gi|115477391|ref|NP_001062291.1| Os08g0525500 [Oryza sativa Japonica Group]
gi|42761404|dbj|BAD11569.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624260|dbj|BAF24205.1| Os08g0525500 [Oryza sativa Japonica Group]
Length = 182
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 135/179 (75%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M K+G PD+ TFNSL E +C SG+VEF V + G C D+STYK++IPAV+KAG
Sbjct: 1 MTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGR 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
IDEAFRL + +EDGH PFPSLYA IIK + G+F DAF FF ++K KGHPPNRPVY
Sbjct: 61 IDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVM 120
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
L+ MC RGGRFVEAANYL+EM+E G P + F+ V DGL++CGKHDLA+++EQLE+S+
Sbjct: 121 LVKMCVRGGRFVEAANYLVEMSEAGFAPRAPTFNSVVDGLRHCGKHDLAQRMEQLEMSM 179
>gi|242082131|ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
gi|241942184|gb|EES15329.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
Length = 426
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 135/215 (62%), Gaps = 32/215 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +GF PPVRGRDLLV GL+ AG+LE AK +M K+G PD+ TFNSL E +C +G+
Sbjct: 242 MASRGFRPPVRGRDLLVDGLVRAGHLEEAKAFALRMTKEGILPDVATFNSLAEALCNAGD 301
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+F V + G C D+S H SLYA
Sbjct: 302 VDFAVALLADASSRGLCPDIS-----------------------------HT---SLYAA 329
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK + G+F DAF FF ++K+KGHPPNRPVY L+ MC RGGRFVEAANYL+EM+E G
Sbjct: 330 IIKALCKAGRFADAFAFFGDMKMKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAG 389
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
TP + F+ V DGL++CGKHDLA ++EQLEVSL+
Sbjct: 390 FTPRAPTFNAVVDGLRHCGKHDLARRLEQLEVSLK 424
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TF+++I + S + VE++ + + G Y L+ A+ G A++LL +
Sbjct: 148 TFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRM 207
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G P + ++ ++ G+ ++A F ++ +G P L+ R G
Sbjct: 208 ARKGVAPDRATFSTLVDSWCAAGKLNEAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGHL 267
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EA + + MT+ G+ P F+ + + L N G D A
Sbjct: 268 EEAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFA 305
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 68/157 (43%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ A ++ N++ + G E +N+L++ +C +G ++ + + G D +T+ L
Sbjct: 163 DQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRMARKGVAPDRATFSTL 222
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ + AG ++EA L ++ G P ++ G R G ++A F + +G
Sbjct: 223 VDSWCAAGKLNEAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGHLEEAKAFALRMTKEGI 282
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
P+ + +L G A L + + GL P
Sbjct: 283 LPDVATFNSLAEALCNAGDVDFAVALLADASSRGLCP 319
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%)
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG +T+ +I + + + D+A + + L G +Y ++ G F
Sbjct: 140 LGLPLSPTTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTG 199
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ + KG P+R ++TL+ G+ EA +L +M G P R DL+ D
Sbjct: 200 AYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLNEAQAFLDDMASRGFRPPVRGRDLLVD 259
Query: 194 GLKNCG 199
GL G
Sbjct: 260 GLVRAG 265
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + + L+ GL A ++ A +++ +M+K+G P+ T+NS++ CK G
Sbjct: 503 MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGN 562
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G DV TY LI + KAG A +LL + G P P Y P
Sbjct: 563 IKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 622
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEM 179
+I+ FRR DA F E+ G PP+ Y + ++C GG EA ++L+EM
Sbjct: 623 VIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNK 682
Query: 180 GLTPISRCFDLVTDGLKNCGKHD 202
G P F ++ +GL N G D
Sbjct: 683 GFMPEFSSFRMLAEGLLNLGMDD 705
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V + ++ L G L+ AK +VN+M+ +G PD TFN+LI +
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G DV T+ ILI A+ K G RL + G P Y
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +A +E++ G P + Y T+I + R EA +M G
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
++ + F+ + DGL + D E IEQ+
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQM 538
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + V GL G++ A ++++ M+++G DPD+ T+N++I + K+GE++
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D +T+ LI A+S ++EA L L G +P + +I
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G F E+K G P+ Y LI G+ A + L EM G
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ + D L C K + E E
Sbjct: 477 TVTYNTIIDAL--CKKMRIEEAEE 498
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P ++L+ G G +E A + + I G +PD T+N+ + +C++G
Sbjct: 258 MMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGH 317
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + G DV TY +I +SK G +DEA +++ +V+ G P + +
Sbjct: 318 VSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNT 377
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + ++A E+ +KG P+ + LI + G EM G
Sbjct: 378 LIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 437
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP ++++ D L + GK
Sbjct: 438 CTPDEVTYNILIDHLCSMGK 457
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V + L++ L A + +A M+ +M G PD TF +L++ + G
Sbjct: 188 MTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G T +LI K G +++A + + DG P Y
Sbjct: 248 IEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNT 307
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + G A + +GH P+ Y T+I + G EA + +M + G
Sbjct: 308 FVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 367
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + F+ + L + +
Sbjct: 368 CLPDTTTFNTLIVALSSQNR 387
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ L+ + + N+M +G PD+ T N+LI+ +C++ +V V M + G
Sbjct: 168 LLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHG 227
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ L+ + G I+ A R+ ++E G +P +I G + G+ +DA
Sbjct: 228 VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDAL 287
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P++ Y T + + G A + M + G P ++ V + L
Sbjct: 288 GYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 347
Query: 196 KNCGKHDLAEKI 207
G+ D A+ I
Sbjct: 348 SKNGELDEAKGI 359
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ L + LE A + ++ +G PD+ TFN LI +CK G+
Sbjct: 363 MVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D TY ILI + G + A LL+ + +G Y
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNT 482
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II ++ + ++A F ++ +G + + TLI + R +A + +M + G
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 542
Query: 181 LTP 183
L P
Sbjct: 543 LQP 545
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ L + G L +A ++N+M G T+N++I+ +CK
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G T+ LI + KA ID+A L+ +V++G P Y
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G A + G + Y TLI + GR A L M G
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 612
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ V L
Sbjct: 613 IRPTPKAYNPVIQSL 627
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG +P V ++L+ L G ++ +M G PD T+N LI+ +C G+
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G TY +I A+ K I+EA + + G + +
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNT 517
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DDA ++ +G PN Y +++T + G +AA+ L MT G
Sbjct: 518 LIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANG 577
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL G+ +A K+
Sbjct: 578 FEIDVVTYGTLINGLCKAGRTQVALKL 604
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M KG P + + ++Q L L A + +M + G PD T+ + ++C+ G
Sbjct: 608 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGG 667
Query: 60 ----EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+F VEM G + S++++L + GM D + ++E F
Sbjct: 668 PIKEAFDFLVEM----VNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAK--FR 721
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEI 141
A I+G + ++ DA F +
Sbjct: 722 ESDASAIRGYLKIRKYYDALATFGRL 747
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 82/216 (37%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ + F P + +VQ L AG + + +V +M ++G S +E+ +
Sbjct: 80 LAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRR 139
Query: 61 VEFCVEMYYSVC---KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ V++ + G AD + L+ + + + + + + G P
Sbjct: 140 FDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVT 199
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+IK R Q A E+ G P+ +TTL+ G A +M
Sbjct: 200 LNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM 259
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
E G +P +++ +G G+ + A Q E++
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIA 295
>gi|361067085|gb|AEW07854.1| Pinus taeda anonymous locus 0_13202_01 genomic sequence
gi|383151573|gb|AFG57829.1| Pinus taeda anonymous locus 0_13202_01 genomic sequence
gi|383151575|gb|AFG57830.1| Pinus taeda anonymous locus 0_13202_01 genomic sequence
gi|383151577|gb|AFG57831.1| Pinus taeda anonymous locus 0_13202_01 genomic sequence
gi|383151579|gb|AFG57832.1| Pinus taeda anonymous locus 0_13202_01 genomic sequence
gi|383151581|gb|AFG57833.1| Pinus taeda anonymous locus 0_13202_01 genomic sequence
Length = 91
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 67/87 (77%)
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+RGQF +A+ F+++K KGH PNRPVYT LI + RGGRF+EAA +L EMTE+ L P +
Sbjct: 1 KRGQFGEAYSLFNDMKDKGHSPNRPVYTMLIRLSCRGGRFLEAATFLAEMTELNLVPRVQ 60
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLEVS 213
FD+V GLKN GK+ LAEKIE+L++S
Sbjct: 61 NFDMVIGGLKNVGKYSLAEKIERLQLS 87
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 1/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + + L+ GL A ++ A +++ +M+K+G P T+NS++ CK G+
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G DV TY LI + KAG A +LL + G P P Y P
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I+ FRR DA F E+ G PP+ Y + +C GG EA ++L+EM
Sbjct: 621 VIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNK 680
Query: 180 GLTPISRCFDLVTDGLKNCGKHD 202
G P F ++ +GL N G D
Sbjct: 681 GFMPEFSSFRMLAEGLLNLGMDD 703
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V + ++ L G L+ AK +VN+M+ +G PD TFN+LI +C
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR 385
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G DV T+ ILI A+ K G RL + G P Y
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNI 445
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +A E++ G P + Y T+I + R EA +M G
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
++ + F+ + DGL + D E IEQ+
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQM 536
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P ++L+ G G +E A + K I G +PD T+N+ + +C++G
Sbjct: 256 MMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGH 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + G DV TY +I +SK G +DEA +++ +V+ G P + +
Sbjct: 316 VSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNT 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + ++A E+ +KG P+ + LI + G EM G
Sbjct: 376 LIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++++ D L + GK
Sbjct: 436 CAPDEVTYNILIDHLCSMGK 455
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+G P V + L++ L A + +A M+ +M PD TF +L++ + G
Sbjct: 186 MTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G T +LI K G +++A + + DG P Y
Sbjct: 246 IEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNT 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G A + +GH P+ Y T+I + G EA + +M + G
Sbjct: 306 FVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + F+ + L C ++ L E ++
Sbjct: 366 CLPDTTTFNTLIVAL--CSQNRLEEALD 391
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + V L G++ A ++++ M+++G DPD+ T+N++I + K+GE++
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D +T+ LI A+ ++EA L L G +P + +I
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G F E+K G P+ Y LI G+ V A + L EM G
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + D L + + AE++
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEV 497
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ L + LE A + ++ +G PD+ TFN LI +CK G+
Sbjct: 361 MVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D TY ILI + G + A LL + +G Y
Sbjct: 421 PHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNT 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II ++ + ++A F ++ G + + TLI + R +A + +M + G
Sbjct: 481 IIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 540
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
L P + ++ + C + DL + + LE
Sbjct: 541 LQPSNITYNSILT--HYCKQGDLKKAADILET 570
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L ++ + + N+M +G PD+ T N+LI+ +C++ +V V M +
Sbjct: 166 LLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA 225
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ L+ + G I+ A R+ ++E G +P +I G + G+ +DA
Sbjct: 226 VAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDAL 285
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P++ Y T + + G A + M + G P ++ V + L
Sbjct: 286 GYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 345
Query: 196 KNCGKHDLAEKI 207
G+ D A+ I
Sbjct: 346 SKNGELDEAKGI 357
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ L + G L +A ++ +M G T+N++I+ +CK
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G T+ LI + KA ID+A L+ +V++G P Y
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G A + G + Y TLI + GR A L M G
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ V L
Sbjct: 611 IRPTPKAYNPVIQSL 625
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG +P V ++L+ L G ++ +M G PD T+N LI+ +C G+
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK 455
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G TY +I A+ K I+EA + + G + +
Sbjct: 456 LVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNT 515
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DDA ++ +G P+ Y +++T + G +AA+ L MT G
Sbjct: 516 LIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANG 575
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL G+ +A K+
Sbjct: 576 FEIDVVTYGTLINGLCKAGRTQVALKL 602
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 86/214 (40%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ + F P + ++Q L AG + + +V +M ++G + S +E+ +
Sbjct: 80 LAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRR 139
Query: 61 VEFCVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ V++ + + G AD + Y L+ +++ + + + + + G P
Sbjct: 140 FDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLN 199
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+IK R Q A E+ P+ +TTL+ G A +M E
Sbjct: 200 TLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMET 259
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
G +P +++ +G G+ + A Q E++
Sbjct: 260 GCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIA 293
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 11/152 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M KG P + + ++Q L L A + +M + G PD T+ + +C+ G
Sbjct: 606 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGG 665
Query: 60 ----EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+F VEM G + S++++L + GM D + ++E F
Sbjct: 666 PIKEAFDFLVEMVNK----GFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKA--KFR 719
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
I+G + ++ DA F + +P
Sbjct: 720 ESDVSAIRGYLKIRKYYDALATFGRLLEINNP 751
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 1/188 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL ++ A +++N+MI +G P+ T+NS++ CK G+++ ++ ++ G
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + KAG A ++L + G P P Y P+++ FRR DA
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ G PP+ Y + +C GG EA ++++EM + G P F ++ +G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Query: 195 LKNCGKHD 202
L N G D
Sbjct: 682 LLNLGMDD 689
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +++V L G LE AK ++N+M+ +G PD+ TFN+LI +C
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ V G DV T+ ILI A+ K G A RL + G P Y
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ A +++ G P + Y T+I + R EA +M G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++ + F+ + DGL K+ D E I Q+
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQM 522
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + V GL ++ A ++++ M+++G DPD+ T+N ++ +CK+G++E
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D++T+ LI A+ ++EA L + G +P + +I
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A F E+K G P+ Y TLI G+ +A + L +M G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ + DGL C K + E E
Sbjct: 461 TITYNTIIDGL--CKKMRIEEAEE 482
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +P V ++L+ L G A ++ +M G PD T+N+LI+ +C G++
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + G TY +I + K I+EA + + G + + +I
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + DDAF +++ +G PN Y +++T + G +AA+ L MT G
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL G+ +A K+
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKV 588
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + L+ L LE A + ++ +G PD+ TFN LI +CK G+
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D TY LI + G + +A LL ++ G Y
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G ++ + ++A F ++ ++G N + TLI + + +A + +M G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + ++ + C + D+ + + LE
Sbjct: 527 LQPNNITYNSILT--HYCKQGDIKKAADILE 555
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L++ L A + +A M+ +M +G PD TF +L++ + G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + ++G A T +LI K G +++A + + DG P Y
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + A + +GH P+ Y ++ + G+ EA L +M + G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P F+ + L C + L E ++
Sbjct: 352 CLPDITTFNTLIAAL--CTGNRLEEALD 377
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G G +E A + + I G +PD T+N+ + +C++ V +++ + +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY I++ + K G ++EA +L+ +V+ G P + + +I + ++
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ +KG P+ + LI + G A EM G TP ++ + D
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 194 GLKNCGK 200
L + GK
Sbjct: 435 NLCSLGK 441
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ L + G L A ++ M G T+N++I+ +CK
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + T+ LI + K ID+AF L++ ++ +G P Y
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G A + G + Y TLI + GR A L M G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ V L
Sbjct: 597 MRPTPKAYNPVLQSL 611
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ ++ + + ++M +G PD+ TFN+L++ +C++ +V V M + G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 211
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ L+ + G I+ A R+ ++E G + +I G + G+ +DA
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P++ Y T + + A + M + G P +++V + L
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 196 KNCGKHDLAEKI 207
G+ + A+ I
Sbjct: 332 CKNGQLEEAKGI 343
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK-SG 59
M KG P + + ++Q L + A + +M + G PD T+ + +C+ G
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + + G + S++++L + GM D R + ++E + A
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSA 711
Query: 120 PIIKGAFRRGQFDDAFCFF 138
I+G + +F DA F
Sbjct: 712 --IRGYLKIRKFYDALATF 728
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 1/188 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL ++ A +++N+MI +G P+ T+NS++ CK G+++ ++ ++ G
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + KAG A ++L + G P P Y P+++ FRR DA
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ G PP+ Y + +C GG EA ++++EM + G P F ++ +G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Query: 195 LKNCGKHD 202
L N G D
Sbjct: 682 LLNLGMDD 689
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +++V L G LE AK ++N+M+ +G PD+ TFN+LI +C
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ V G DV T+ ILI A+ K G A RL + G P Y
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ A +++ G P + Y T+I + R EA +M G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++ + F+ + DGL K+ D E I Q+
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQM 522
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + V GL ++ A ++++ M+++G DPD+ T+N ++ +CK+G++E
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D++T+ LI A+ ++EA L + G +P + +I
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A F E+K G P+ Y TLI G+ +A + L +M G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ + DGL C K + E E
Sbjct: 461 TITYNTIIDGL--CKKMRIEEAEE 482
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +P V ++L+ L G A ++ +M G PD T+N+LI+ +C G++
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + G TY +I + K I+EA + + G + + +I
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + DDAF +++ +G PN Y +++T + G +AA+ L MT G
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL G+ +A K+
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKV 588
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + L+ L LE A + ++ +G PD+ TFN LI +CK G+
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D TY LI + G + +A LL ++ G Y
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G ++ + ++A F ++ ++G N + TLI + + +A + +M G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + ++ + C + D+ + + LE
Sbjct: 527 LQPNNITYNSILT--HYCKQGDIKKAADILE 555
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L++ L A + +A M+ +M +G PD TF +L++ + G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + ++G A T +LI K G +++A + + DG P Y
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + A + +GH P+ Y ++ + G+ EA L +M + G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P F+ + L C + L E ++
Sbjct: 352 CLPDITTFNTLIAAL--CTGNRLEEALD 377
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G G +E A + + I G +PD T+N+ + +C++ V +++ + +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY I++ + K G ++EA +L+ +V+ G P + + +I + ++
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ +KG P+ + LI + G A EM G TP ++ + D
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 194 GLKNCGK 200
L + GK
Sbjct: 435 NLCSLGK 441
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ L + G L A ++ M G T+N++I+ +CK
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + T+ LI + K ID+AF L++ ++ +G P Y
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G A + G + Y TLI + GR A L M G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ V L
Sbjct: 597 MRPTPKAYNPVLQSL 611
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ ++ + + ++M +G PD+ TFN+L++ +C++ +V V M + G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRG 211
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ L+ + G I+ A R+ ++E G + +I G + G+ +DA
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P++ Y T + + A + M + G P +++V + L
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 196 KNCGKHDLAEKI 207
G+ + A+ I
Sbjct: 332 CKNGQLEEAKGI 343
Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK-SG 59
M KG P + + ++Q L + A + +M + G PD T+ + +C+ G
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + + G + S++++L + GM D R + ++E + A
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSA 711
Query: 120 PIIKGAFRRGQFDDAFCFF 138
I+G + +F DA F
Sbjct: 712 --IRGYLKIRKFYDALATF 728
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ G G L+ A + NKMI + PD+ TFN L++ CKSG+
Sbjct: 253 MVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGK 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G ++ TY ++ A+ K +D+A LL L + G P Y
Sbjct: 313 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTI 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +DA F ++ +KG+ Y + + G F EA+ L +M E G
Sbjct: 373 LIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENG 432
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P ++ ++L+ L G++D+AEK+ +
Sbjct: 433 CIPDAKTYELIKLSLFKKGENDMAEKLHR 461
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++L+ G + A + K++K G +P+ TF +LI+ +C G+
Sbjct: 113 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQ 172
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + LG + +Y LI + K G A LL + P +Y+
Sbjct: 173 IHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYST 232
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + +DAF +SE+ KG PN Y+ LI+ G+ +A + +M
Sbjct: 233 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISEN 292
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F+++ D GK A K+
Sbjct: 293 IKPDVYTFNILVDVFCKSGKISYALKL 319
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+NP L++GL G + A +K++ G + ++ +LI+ +CK GE
Sbjct: 152 GYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAA 211
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ V +V Y +I + K +++AF L +V G +P Y+ +I G
Sbjct: 212 LDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 271
Query: 125 AFRRGQFDDA-------------------------FC----------FFSEIKIKGHPPN 149
F G+ DA FC E+ +G PPN
Sbjct: 272 FFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPN 331
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y++++ + R +A L ++ + G+ P + ++ DGL GK + A I
Sbjct: 332 IVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNI 389
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 78/193 (40%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP + ++ L+ + + + + KM +G P+L N LI C+ G + F +
Sbjct: 85 PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K+G + T+ LI + G I +A LV G Y +I G +
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A + K PN +Y+T+I + +A + EM G++P
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264
Query: 188 FDLVTDGLKNCGK 200
+ + G GK
Sbjct: 265 YSALISGFFTVGK 277
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL ++ A Q++++MI +G P+ T+NS++ CK G+++ ++ ++
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTA 563
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY LI + KAG A +LL + G P Y P+I+ FRR D
Sbjct: 564 NGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRD 623
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F E+ G PP+ Y + +C GG EA ++L+EM + G P F ++
Sbjct: 624 AMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLA 683
Query: 193 DGLKNCGKHD 202
+GL N G D
Sbjct: 684 EGLLNLGMDD 693
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +++V L G LE AK ++N+M+++G PD+ TFN+LI +C
Sbjct: 316 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNR 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ V G DV T+ ILI A+ K G A RL + G P Y
Sbjct: 376 LEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNT 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ A E++ G P + Y T+I + R EA +M G
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + F+ + DGL + D A ++
Sbjct: 496 ISRNAITFNTLIDGLCKDKRIDDANQL 522
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + V GL G++ A ++++ M+++G DPD+ T+N ++ +CK+G++E
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G D++T+ LI A+ ++EA L + G +P + +I
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A F E+K G P+ Y TLI G+ +A + L EM G
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ + DGL C K + E E
Sbjct: 465 TVTYNTIIDGL--CKKMRIEEAEE 486
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P L+QG + G +++A ++ +M++ G P T N LI CK G
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGR 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + G D TY + + + G + A +++ +V++GH+P Y
Sbjct: 271 VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNI 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + GQ ++A +++ +G P+ + TLI G R EA + ++T G
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P F+++ + L G LA ++
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRL 417
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P ++L+ G G +E A + + I G +PD T+N+ + +C++G
Sbjct: 246 MLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGH 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + G DV TY I++ + K G ++EA +L+ +VE G P + +
Sbjct: 306 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNT 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + ++A ++ +KG P+ + LI + G A EM G
Sbjct: 366 LIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP ++ + D L + GK
Sbjct: 426 CTPDEVTYNTLIDNLCSLGK 445
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +P V ++L+ L G + A ++ +M G PD T+N+LI+ +C G++
Sbjct: 389 KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGK 448
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + G TY +I + K I+EA + + G + + +I
Sbjct: 449 ALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 508
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + DDA S++ +G PN Y +++T + G +AA+ L MT G
Sbjct: 509 GLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEV 568
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL G+ +A K+
Sbjct: 569 DVVTYGTLINGLCKAGRTQVALKL 592
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + L+ L + LE A + ++ +G PD+ TFN LI +CK G+
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G D TY LI + G + +A LL + G Y
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G ++ + ++A F ++ ++G N + TLI + R +A + +M G
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530
Query: 181 LTP 183
L P
Sbjct: 531 LQP 533
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ ++ + + ++M ++G PD+ TFN+L++ +C++ +V V M + G
Sbjct: 156 LLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ L+ + G I A R+ ++E G +P +I G + G+ +DA
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P++ Y T + + G A + M + G P +++V + L
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 335
Query: 196 KNCGKHDLAEKI 207
G+ + A+ I
Sbjct: 336 CKNGQLEEAKGI 347
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 79/195 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ L + G L A ++ +M G T+N++I+ +CK
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + T+ LI + K ID+A +L+ ++ +G P Y
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNS 540
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G A + G + Y TLI + GR A L M G
Sbjct: 541 ILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
Query: 181 LTPISRCFDLVTDGL 195
+ + ++ V L
Sbjct: 601 MRATPKAYNPVIQSL 615
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 2/186 (1%)
Query: 30 KQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK--LGSCADVSTYKILI 87
K +V +M ++G + +S +E+ + V++ + G AD Y L+
Sbjct: 98 KVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLL 157
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+ + + + + E G P + ++K R Q A E+ G
Sbjct: 158 NVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVA 217
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P+ +TTL+ G A M EMG +P +++ +G G+ + A
Sbjct: 218 PDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGY 277
Query: 208 EQLEVS 213
Q E++
Sbjct: 278 IQQEIA 283
Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 3/148 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK-SG 59
M KG + + ++Q L A + +M + G PD T+ + +C+ G
Sbjct: 596 MRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGG 655
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ + + G + S++++L + GM D R + ++E + A
Sbjct: 656 SIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDVSA 715
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
I+G + +F DA F + +P
Sbjct: 716 --IRGYLKIRKFYDALATFGRLLKINNP 741
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 1/188 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL ++ A +++N+MI +G P+ T+NS++ CK G+++ ++ ++ G
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + KAG A ++L + G P P Y P+++ FRR DA
Sbjct: 470 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 529
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ G PP+ Y + +C GG EA ++++EM + G P F ++ +G
Sbjct: 530 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 589
Query: 195 LKNCGKHD 202
L N G D
Sbjct: 590 LLNLGMDD 597
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +++V L G LE AK ++N+M+ +G PD+ TFN+LI +C
Sbjct: 220 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 279
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ V G DV T+ ILI A+ K G A RL + G P Y
Sbjct: 280 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 339
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ A +++ G P + Y T+I + R EA +M G
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++ + F+ + DGL K+ D E I Q+
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQM 430
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + V GL ++ A ++++ M+++G DPD+ T+N ++ +CK+G++E
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D++T+ LI A+ ++EA L + G +P + +I
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A F E+K G P+ Y TLI G+ +A + L +M G
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ + DGL C K + E E
Sbjct: 369 TITYNTIIDGL--CKKMRIEEAEE 390
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +P V ++L+ L G A ++ +M G PD T+N+LI+ +C G++
Sbjct: 293 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 352
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + G TY +I + K I+EA + + G + + +I
Sbjct: 353 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + DDAF +++ +G PN Y +++T + G +AA+ L MT G
Sbjct: 413 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 472
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL G+ +A K+
Sbjct: 473 DVVTYGTLINGLCKAGRTQVALKV 496
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + L+ L LE A + ++ +G PD+ TFN LI +CK G+
Sbjct: 255 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D TY LI + G + +A LL ++ G Y
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G ++ + ++A F ++ ++G N + TLI + + +A + +M G
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + ++ + C + D+ + + LE
Sbjct: 435 LQPNNITYNSILT--HYCKQGDIKKAADILE 463
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L++ L A + +A M+ +M +G PD TF +L++ + G
Sbjct: 80 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 139
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + ++G A T +LI K G +++A + + DG P Y
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + A + +GH P+ Y ++ + G+ EA L +M + G
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P F+ + L C + L E ++
Sbjct: 260 CLPDITTFNTLIAAL--CTGNRLEEALD 285
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G G +E A + + I G +PD T+N+ + +C++ V +++ + +
Sbjct: 163 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 222
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY I++ + K G ++EA +L+ +V+ G P + + +I + ++
Sbjct: 223 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ +KG P+ + LI + G A EM G TP ++ + D
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342
Query: 194 GLKNCGK 200
L + GK
Sbjct: 343 NLCSLGK 349
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ L + G L A ++ M G T+N++I+ +CK
Sbjct: 325 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 384
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + T+ LI + K ID+AF L++ ++ +G P Y
Sbjct: 385 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 444
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G A + G + Y TLI + GR A L M G
Sbjct: 445 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ V L
Sbjct: 505 MRPTPKAYNPVLQSL 519
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ ++ + + ++M +G PD+ TFN+L++ +C++ +V V M + G
Sbjct: 60 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 119
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ L+ + G I+ A R+ ++E G + +I G + G+ +DA
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 179
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P++ Y T + + A + M + G P +++V + L
Sbjct: 180 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 239
Query: 196 KNCGKHDLAEKI 207
G+ + A+ I
Sbjct: 240 CKNGQLEEAKGI 251
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL NA ++ A ++V++MI +G P+ T+NS++ CK G + ++ ++
Sbjct: 515 NTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTA 574
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY LI + KA A +LL + G P P Y P+I+ FR D
Sbjct: 575 NGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRD 634
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F E+ G PP+ Y + +C GG EA ++L+EM + G P F ++
Sbjct: 635 ALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLA 694
Query: 193 DGLKNCGKHD 202
+GL N G D
Sbjct: 695 EGLLNLGMDD 704
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ L N G LE AK +VN+M+ G PD TFN+LI +C +
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQ 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G +V T+ ILI A+ K G A RL + G P Y
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ A E+++ G P + Y T+I + R EA +M G
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG 506
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
+ + F+ + DGL N + D AE ++Q+
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQM 537
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V GL G+++ A +++ M+++G +PD+ T++++I +C +GE+E
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D +T+ LI A+ ++EA L L G +P + +I
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A F E+K G P+ Y LI G+ +A + L EM G
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
+ ++ + DGL + + AE++ +Q++V+
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G +P ++L+ G G + A + + I G +PD TF++ + +C++G
Sbjct: 257 MSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGH 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + G DV TY +I + G ++EA +++ +V+ G P + +
Sbjct: 317 VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNT 376
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I Q ++A E+ +KG PN + LI + G A EM G
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLEVS 213
TP ++++ D L + GK A + ++++EVS
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS 470
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L+ L LE A + ++ +G P++ TFN LI +CK G+
Sbjct: 362 MVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGD 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G D TY ILI + +G + +A LL + G Y
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNT 481
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G +R + ++A F ++ + G N + TLI R +AA + +M G
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG 541
Query: 181 LTP 183
L P
Sbjct: 542 LQP 544
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P V + ++ L A +A M+ +M PD TF +L+E + G
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + ++G T +LI K G + +A + + DG P ++
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + G D A + +G P+ Y+T+I G EA + +M + G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + F+ + L C ++ L E ++
Sbjct: 367 CLPDTTTFNTLIVAL--CTENQLEEALD 392
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
LESA +M QG +PD+ TFN++I+ +C++ + V M + D +T+
Sbjct: 180 LESA---YTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G I+ A RL + E G +P +I G + G+ DA + + G
Sbjct: 237 LMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADG 296
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+R ++T + + G A L M + G P + V + L N G+ + A+
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAK 356
Query: 206 KI 207
I
Sbjct: 357 GI 358
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG +P V ++L+ L G A ++ +M G PD T+N LI+ +C SG+
Sbjct: 397 LTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK 456
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G TY +I + K I+EA + + G +
Sbjct: 457 LAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNT 516
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + DDA ++ +G PN Y +++T + G +AA+ L MT G
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANG 576
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL + A K+
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKL 603
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 2/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ L ++G L A ++ +M G T+N++I+ +CK
Sbjct: 432 MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRR 491
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + T+ LI + A ID+A L+ ++ +G P Y
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G A + G + Y TLI + R A L M G
Sbjct: 552 ILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG 611
Query: 181 LTPISRCFDLVTDGL--KNCGKHDLAEKIEQLEV 212
+ P + ++ V L N G+ L+ E EV
Sbjct: 612 MKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEV 645
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 11/152 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M KG P + + ++Q L A + +M + G PD T+ + +C+ G
Sbjct: 607 MRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGG 666
Query: 60 ----EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+F VEM + G + S++++L + GM D R + +VE + F
Sbjct: 667 PIKEAFDFLVEMADN----GFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKAN--FR 720
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
I+G R ++ DA F + +P
Sbjct: 721 ESDISAIRGYLRIRKYYDAIATFGRLLEVNNP 752
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 1/199 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P + +++ L AG + K +V +M ++G + L S I + + +
Sbjct: 83 DDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFD 142
Query: 63 FCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++ + + G A+ Y L+ +++ I + G P + +
Sbjct: 143 DAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTV 202
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I R Q A E+ P+ +TTL+ G A M+EMG
Sbjct: 203 IDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGC 262
Query: 182 TPISRCFDLVTDGLKNCGK 200
+P S +++ +G G+
Sbjct: 263 SPTSVTVNVLINGYCKLGR 281
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + V + L+ GL +E A Q++++M+ +G PD T+NSL+ C++G+
Sbjct: 517 MELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGD 576
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G D TY LI +SKAG ++ A RLL + G P Y P
Sbjct: 577 IKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNP 636
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+IK FR + +A F E+ KG PP+ Y + +C GG EA ++L+EMT+
Sbjct: 637 VIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDK 696
Query: 180 GLTPISRCFDLVTDGL 195
G P F ++ +GL
Sbjct: 697 GFLPDFSSFLMLAEGL 712
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++GF P + LV GL G+++ A ++++ M+++G DPD+ T+NSLI +CK GE
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE VE+ + + TY LI + K ++EA L L G P +
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEM 179
+I+G A F E+K KG P+ Y LI ++C R GR EA + L EM
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR-GRLEEALSLLKEMESS 485
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G + ++ + DG + + AE+I
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEI 513
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+P + + L+ GL G +E A +++N+MI + P+ T+N+LI T+CK +
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + G DV T+ LI + A L + G +P Y
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RG+ ++A E++ G N Y TLI + R EA EM G
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++ ++ + DGL KN + A+ ++Q+
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P V + L+QGL A ++ +M +G PD T+N LI+++C G
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR 471
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G +V TY LI K I+EA + + G + Y
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A ++ ++G P++ Y +L+T R G +AA+ + MT G
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S + + GL G+ +LA ++
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRL 618
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ F+P + L+ L +E A ++ + +G PD+ TFNSLI+ +C +
Sbjct: 380 RDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRL 439
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E++ + G D TY +LI ++ G ++EA LL + G + Y +I
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLID 499
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++A F E++++G N Y TLI + R EAA + +M GL P
Sbjct: 500 GFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKP 559
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + L+QG + G + A ++ +M+ G T N L+ CK G
Sbjct: 237 MGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGR 296
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D T+ L+ + + G + A +L ++++G +P Y
Sbjct: 297 IEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNS 356
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++A +++ ++ PN Y TLI+ + + EA +T G
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P F+ + GL H LA
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLA 440
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P ++L+ L + G LE A ++ +M G ++ T+N+LI+ CK+
Sbjct: 447 MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR 506
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G +V TY LI + K ++EA +L+ ++ +G P Y
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ R G A + G P+ Y TLI + GR VE A+ L+ ++
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGR-VELASRLLRTVQL 624
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ L++ L+ + + ++M+ +G PD+ TFN LI+ +C++ ++ + M +
Sbjct: 180 NFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGS 239
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D T+ L+ + G ++ A R+ +V G ++ G + G+ ++
Sbjct: 240 YGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEE 299
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F E+ +G P+R + +L+ R G A L M + G P ++ +
Sbjct: 300 VLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIF 359
Query: 194 GLKNCGKHDLAEKIEQL 210
GL C ++ E +E L
Sbjct: 360 GL--CKLGEVEEAVEIL 374
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L++ + A +V+ M ++ G D T+N L+ + +++ + +
Sbjct: 145 ILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVS 204
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV+T+ ILI A+ +A I A ++ + G +P + +++G G +
Sbjct: 205 RGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNG 264
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ G P + L+ + GR E +++ EM+ G P F+ + +
Sbjct: 265 ALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVN 324
Query: 194 GLKNCGKHDLAEKIEQLEVSLR 215
GL C + +E L+V L+
Sbjct: 325 GL--CRIGHVKHALEILDVMLQ 344
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL ++ A ++N+MI +G P+ T+NS++ CK G+++ ++ ++ G
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + KAG A ++L + G P P Y P+++ FRR DA
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ G PP+ Y + +C GG EA ++++EM + G P F ++ +G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Query: 195 LKNCGKHD 202
L N G D
Sbjct: 682 LLNLGMDD 689
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +++V L G LE AK ++N+M+ +G PD+ TFN+LI +C
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ V G DV T+ ILI A+ K G A RL + G P Y
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ A +++ G P + Y T+I + R EA +M G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 181 LTPISRCFDLVTDGL 195
++ + F+ + DGL
Sbjct: 492 ISRNAITFNTLIDGL 506
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + V GL ++ A ++++ M+++G DPD+ T+N ++ +CK+G++E
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D++T+ LI A+ ++EA L + G +P + +I
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A F E+K G P+ Y TLI G+ +A + L +M G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ + DGL C K + E E
Sbjct: 461 TITYNTIIDGL--CKKMRIEEAEE 482
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +P V ++L+ L G A ++ +M G PD T+N+LI+ +C G++
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + G TY +I + K I+EA + + G + + +I
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + DDAF +++ +G PN Y +++T + G +AA+ L MT G
Sbjct: 505 GLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL G+ +A K+
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKV 588
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L++ L A + +A M+ +M +G PD TF +L++ + G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + ++G A T +LI K G +++A + + DG P Y
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + A + +GH P+ Y ++ + G+ EA L +M + G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P F+ + L C + L E ++
Sbjct: 352 CLPDITTFNTLIAAL--CTGNRLEEALD 377
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G G +E A + + I G +PD T+N+ + +C++ V +++ + +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY I++ + K G ++EA +L+ +V+ G P + + +I + ++
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ +KG P+ + LI + G A EM G TP ++ + D
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 194 GLKNCGK 200
L + GK
Sbjct: 435 NLCSLGK 441
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ L + G L A ++ M G T+N++I+ +CK
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + T+ LI + K ID+AF L++ ++ +G P Y
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNS 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G A + G + Y TLI + GR A L M G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ V L
Sbjct: 597 MRPTPKAYNPVLQSL 611
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ ++ + + ++M +G PD+ TFN+L++ +C++ +V V M + G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 211
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ L+ + G I+ A R+ ++E G + +I G + G+ +DA
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P++ Y T + + A + M + G P +++V + L
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 196 KNCGKHDLAEKI 207
G+ + A+ I
Sbjct: 332 CKNGQLEEAKGI 343
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK-SG 59
M KG P + + ++Q L + A + +M + G PD T+ + +C+ G
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + + G + S++++L + GM D R + ++E + A
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSA 711
Query: 120 PIIKGAFRRGQFDDAFCFF 138
I+G + +F DA F
Sbjct: 712 --IRGYLKIRKFYDALATF 728
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ GL+ A L+ A Q++ KM K+G PD T+N+LI + K+G
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G DV TY LI A+ KA ++ A L + G P Y
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + GQ DDA FSE++ KG P+ Y + GRGGRF EA +M E G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 181 LTPISRCFDLVTDGLKNCGKHD-----LAEKIEQ 209
L P +D + GL + D L E IEQ
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+ P V L+ L AG E+A ++V +M +G P+L T+N+L++ + K+G+ + +
Sbjct: 40 WTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEAL 99
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + G DV TY LI + KAG + EAF L + E G P Y +I G
Sbjct: 100 RLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGL 159
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G+ A E++ G PP+ Y++LIT G+ G V+A EM G P S
Sbjct: 160 GKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDS 219
Query: 186 RCFDLVTDGLKNCGKHDLA 204
F + D L G+ D A
Sbjct: 220 ITFTALMDALGKAGRVDDA 238
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + LV L AG + A +++ +M G PD+ T+N LI T+ K+G
Sbjct: 70 MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G D TY LI + K G +A LL + G P Y+
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ AF F E+K +G P+ +T L+ G+ GR +A L EM E G
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P ++ + G G DL E L+
Sbjct: 250 VKPGVVTYNALIAGFGKVG--DLVEAYNLLD 278
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P VR + L+ L AG L A + +M ++G PD T+NSLI + K G
Sbjct: 105 MRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGR 164
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + + G DV TY LI + K G +AF+L + G P +
Sbjct: 165 SQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTA 224
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ DDA E+K +G P Y LI G+ G VEA N L EM G
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + GL + D A
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEA 308
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + L+ GL G + A +++ +M + G PD+ T++SLI + K GE
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + + G D T+ L+ A+ KAG +D+A LL + E G P Y
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G +A+ E+K G P+ Y+ LIT + + EA L +M + G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 181 LTPISRCFDLVTDGLKNCG 199
P + ++ + +GL G
Sbjct: 320 CPPDTITYNTLINGLGKAG 338
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 4 KGF-NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
KGF +P V + L+ L AG E A+ + ++ PD+ +++ LI ++ ++G+ E
Sbjct: 2 KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+E+ + G ++ TY L+ + KAG DEA RLL + ++G P Y +I
Sbjct: 62 AALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLI 121
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ G+ +AF F+E++ +G P+ Y +LI G+ GR +A L EM G
Sbjct: 122 STLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCP 181
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + GL G+ A K+ Q
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQ 208
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ L AG ++ A +++++M ++G P + T+N+LI K G+
Sbjct: 210 MKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G DV TY LI + KA +DEA ++L + ++G P Y
Sbjct: 270 LVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNT 329
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G +DA F +K KG P+ Y+TLIT G+ R A EM +G
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + L G+ D A+++
Sbjct: 390 IQPDLFTYCSIITVLGKAGQVDDADRL 416
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ GL AG L A ++ ++M +G +PD+ T+++LI + K+
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ + +G D+ TY +I + KAG +D+A RL + G +P Y
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ R G+F +A F ++K G P+ Y L+ + +A L E+ E G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
S FD + L + G D A ++ Q S
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANS 527
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ GL G A ++ +M ++G PD TF +L++ + K+G
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G V TY LI K G + EA+ LL + +G P Y+
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + Q D+A +++ +G PP+ Y TLI G+ G +A M G
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354
Query: 181 LTP 183
P
Sbjct: 355 CNP 357
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V + + L G + A+++ M + G PD+ T+++L+ + K+ E
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D + + ++ G +DEA LL G P S Y
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +AF ++K +G P+ Y++LI+ G+ G+ A L EM++ G
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
Query: 181 LTPISRCFDLVTDGLKNCGKH 201
L R + + L++ G
Sbjct: 600 LKLSPRSYSNLVRKLQDWGAR 620
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 99/246 (40%), Gaps = 36/246 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG NP V L+ L A +ESA + +M G PDL T+ S+I + K+G+
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G DV TY + ++ + G EA ++ ++ E G P + Y
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469
Query: 121 IIKGAFRRGQFDDAF----------CFFSEIKI-------------------------KG 145
++ G + + DDA C F +K KG
Sbjct: 470 LLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKG 529
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA- 204
P Y LI + GR EA N L ++ E G P + + L G+ D A
Sbjct: 530 LWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAF 589
Query: 205 EKIEQL 210
E +E++
Sbjct: 590 ELLEEM 595
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++KG P V+ L+ L+ A LE + + M +QG PD+ F++ I CK G+
Sbjct: 270 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGK 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++++ + KLG +V TY LI + K G +DEAFR +V+DG N Y+
Sbjct: 329 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F++A E KG PN VY TLI + G +A +M G
Sbjct: 389 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 448
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P S + + G G+ + AE I
Sbjct: 449 INPNSVTLNSIIQGFCKIGQMEQAECI 475
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF + + L+ GL G ++ A +++ KM+++G D T+N+LI CK G+VE
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 610
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + K G D TY +LI + + G +DEA L + P Y +I
Sbjct: 611 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + ++ F+E+ + N VY TLI R G VEA +M G+
Sbjct: 671 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730
Query: 183 PISRCFDLVTDGLKNCGKHDLAE 205
P + + + G+ N G+ + A+
Sbjct: 731 PTTATYSSLIHGMCNIGRMEDAK 753
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF + L+ G G +E ++ +M+KQG +PD T+N LI +C+ G+
Sbjct: 584 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 643
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V ++ +V TY ++I KA I+E +L L+ +Y
Sbjct: 644 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 703
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R G +AF +++ KG PP Y++LI GR +A + EM + G
Sbjct: 704 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 763
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P C+ + G G+ D + Q
Sbjct: 764 LLPNVVCYTALIGGYCKLGQMDKVVNVLQ 792
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +LL+ G+ G L+ A + N+ + P++ T+ +I+ CK+ +
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + + Y LI A + G EAF+L ++ G P + Y+
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 738
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +DA C E++ +G PN YT LI + G+ + N L EM+
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ DG G A K+
Sbjct: 799 IHPNKITYTVMIDGYSKSGDMKTAAKL 825
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ GL G L+ A + KM+K G + L T++ LI + K +
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + G + Y LI K G + +A R+ ++V G NP
Sbjct: 399 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G + GQ + A C E+ +G N +TT+I RF A +L EM
Sbjct: 459 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 518
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + GL GKH A ++
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVEL 545
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+ ++ L ESA + + +M+ + P+ +L+ +CK G+
Sbjct: 479 MLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGK 538
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE+++ + + G A++ T LI + K G + EA RLL ++E G Y
Sbjct: 539 HSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNT 598
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++ F E+ +G P+ Y LI R G+ EA N E
Sbjct: 599 LISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD 658
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ DG K + EK+
Sbjct: 659 LVPNVYTYGVMIDGYCKADKIEEGEKL 685
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++ G A +E +++ +++ Q + + +N+LI C++G ++
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G +TY LI + G +++A L+ + ++G P Y +I G +
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 780
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
GQ D E+ PN+ YT +I + G AA L EM G+ P +
Sbjct: 781 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 840
Query: 188 FDLVTDGLKNCGK 200
++++T+G GK
Sbjct: 841 YNVLTNGFCKEGK 853
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G+ N G +E AK ++++M K+G P++ + +LI CK G+
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V + + + TY ++I SK+G + A +LLH +V G P Y
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 843
Query: 121 IIKGAFRRGQFDDA 134
+ G + G+ ++
Sbjct: 844 LTNGFCKEGKIEEG 857
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 90/237 (37%), Gaps = 35/237 (14%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF P + L+ G G L A ++ M+ +G +P+ T NS+I+ CK G++E
Sbjct: 411 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 470
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + G + + +I + + A R L ++ P L ++
Sbjct: 471 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 530
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPN--------------------------------- 149
G + G+ DA + + KG N
Sbjct: 531 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 590
Query: 150 --RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ Y TLI+ C + G+ E EM + G+ P + ++L+ G+ GK D A
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 647
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G N + +L+ GL+ A ++ + +++G P+ +N+LI+ CK G
Sbjct: 374 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + T +I K G +++A +L ++ G + P +
Sbjct: 434 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II +F+ A F E+ ++ PN + TTL+ + G+ +A + E G
Sbjct: 494 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 553
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ + GL C ++ E + L+
Sbjct: 554 FGANLVTTNALIHGL--CKTGNMQEAVRLLK 582
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++KG P V+ L+ L+ A LE + + M +QG PD+ F++ I CK G+
Sbjct: 203 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGK 261
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++++ + KLG +V TY LI + K G +DEAFR +V+DG N Y+
Sbjct: 262 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 321
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F++A E KG PN VY TLI + G +A +M G
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P S + + G G+ + AE I
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECI 408
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF + + L+ GL G ++ A +++ KM+++G D T+N+LI CK G+VE
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 543
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + K G D TY +LI + + G +DEA L + P Y +I
Sbjct: 544 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 603
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + ++ F+E+ + N VY TLI R G VEA +M G+
Sbjct: 604 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663
Query: 183 PISRCFDLVTDGLKNCGKHDLAE 205
P + + + G+ N G+ + A+
Sbjct: 664 PTTATYSSLIHGMCNIGRMEDAK 686
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF + L+ G G +E ++ +M+KQG +PD T+N LI +C+ G+
Sbjct: 517 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 576
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V ++ +V TY ++I KA I+E +L L+ +Y
Sbjct: 577 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 636
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R G +AF +++ KG PP Y++LI GR +A + EM + G
Sbjct: 637 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 696
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P C+ + G G+ D + Q
Sbjct: 697 LLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ GL G L+ A + KM+K G + L T++ LI + K +
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 331
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + G + Y LI K G + +A R+ ++V G NP
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G + GQ + A C E+ +G N +TT+I RF A +L EM
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + GL GKH A
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDA 475
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G+ N G +E AK ++++M K+G P++ + +LI CK G+
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V + + + TY ++I SK+G + A +LLH +V G P Y
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 776
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+ G + G+ ++ F + +G P + YTTL+
Sbjct: 777 LTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+ ++ L ESA + + +M+ + P+ +L+ +CK G+
Sbjct: 412 MLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGK 471
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE+++ + + G A++ T LI + K G + EA RLL ++E G Y
Sbjct: 472 HSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNT 531
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++ F E+ +G P+ Y LI R G+ EA N E
Sbjct: 532 LISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD 591
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ DG K + EK+
Sbjct: 592 LVPNVYTYGVMIDGYCKADKIEEGEKL 618
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++ G A +E +++ +++ Q + + +N+LI C++G ++
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G +TY LI + G +++A L+ + ++G P Y +I G +
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 713
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
GQ D E+ PN+ YT +I + G AA L EM G+ P +
Sbjct: 714 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 773
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++++T+G GK + KI
Sbjct: 774 YNVLTNGFCKEGKIEEGFKI 793
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 90/237 (37%), Gaps = 35/237 (14%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF P + L+ G G L A ++ M+ +G +P+ T NS+I+ CK G++E
Sbjct: 344 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 403
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + G + + +I + + A R L ++ P L ++
Sbjct: 404 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 463
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPN--------------------------------- 149
G + G+ DA + + KG N
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523
Query: 150 --RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ Y TLI+ C + G+ E EM + G+ P + ++L+ G+ GK D A
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 580
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G N + +L+ GL+ A ++ + +++G P+ +N+LI+ CK G
Sbjct: 307 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 366
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + T +I K G +++A +L ++ G + P +
Sbjct: 367 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II +F+ A F E+ ++ PN + TTL+ + G+ +A + E G
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ + GL C ++ E + L+
Sbjct: 487 FGANLVTTNALIHGL--CKTGNMQEAVRLLK 515
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL + +E A Q++++MI +G PD T+NSL+ CK+G+++ ++ ++
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY LI + KAG ++ A +LL + G N P Y P+I+ FRR + +
Sbjct: 575 DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKE 634
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F E+ K P+ Y + +C GG EA +++MEM E G P F ++
Sbjct: 635 AVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLA 694
Query: 193 DGL 195
+GL
Sbjct: 695 EGL 697
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 3/211 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P ++LV GL G+++ A ++++ M+++G DPD+ T+NSLI +CK GEV+
Sbjct: 295 EGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDE 354
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
V++ + + + TY +I + K ++EA +L L G P Y +I+
Sbjct: 355 AVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQ 414
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLT 182
G A + E+K KG P+ Y LI ++C R G+ EA N L EM G
Sbjct: 415 GLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR-GKLQEALNLLKEMEVSGCA 473
Query: 183 PISRCFDLVTDGL-KNCGKHDLAEKIEQLEV 212
++ + DG KN + E +Q+E+
Sbjct: 474 RNVITYNTLIDGFCKNKRIAEAEEIFDQMEL 504
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+P + + L+ GL G ++ A +++N+MI++ P+ T+N++I T+CK +
Sbjct: 327 MLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQ 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ + G DV TY LI + + A L + G +P Y
Sbjct: 387 VEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNM 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RG+ +A E+++ G N Y TLI + R EA +M G
Sbjct: 447 LIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQG 506
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
++ S ++ + DGL C K + E+ QL
Sbjct: 507 VSRNSVTYNTLIDGL--C-KSERVEEASQL 533
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 19 GLLNAGYLESAKQMVNKM-IKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC 77
G G +E A + + +M +++G PD TFN L+ + K+G V+ +E+ + + G
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
D+ TY LI + K G +DEA ++L+ ++E +P Y II + Q ++A
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
+ KG P+ Y +LI A EM G P ++++ D L
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL-- 451
Query: 198 CGKHDLAEK---IEQLEVS 213
C + L E ++++EVS
Sbjct: 452 CFRGKLQEALNLLKEMEVS 470
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P V + L+QGL + A ++ +M +G PD T+N LI+++C G+
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G +V TY LI K I EA + + G + Y
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A ++ ++G P++ Y +L+T + G +AA+ + M G
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + GL G+ + A K+
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKL 603
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 7/208 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + ++QG + G L+ A ++ +M++ G T N L+ CK G
Sbjct: 221 MEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGR 280
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+E F EM + G D T+ +L+ +SK G + A ++ ++ +G +P
Sbjct: 281 IEEALRFIEEM---SLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIY 337
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +I G + G+ D+A +++ + PN Y T+I+ + + EA + +
Sbjct: 338 TYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVL 397
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLA 204
T G+ P ++ + GL H +A
Sbjct: 398 TGKGILPDVCTYNSLIQGLCLSRNHTVA 425
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P ++L+ L G L+ A ++ +M G ++ T+N+LI+ CK+
Sbjct: 432 MKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKR 491
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G + TY LI + K+ ++EA +L+ ++ +G P Y
Sbjct: 492 IAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNS 551
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
++ + G A + G P+ Y TLI + GR VEAA L+ +M
Sbjct: 552 LLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGR-VEAATKLLRTIQMK 610
Query: 180 --GLTP 183
LTP
Sbjct: 611 GINLTP 616
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ L++ L+ + + M+ +G PD+ TFN LI+ +C++ ++ + + +
Sbjct: 164 NFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMED 223
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D T+ ++ + G +D A R+ +VE G ++ G + G+ ++
Sbjct: 224 FGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEE 283
Query: 134 AFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F E+ ++ G P++ + L+ + G A + M G P ++ +
Sbjct: 284 ALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLI 343
Query: 193 DGLKNCGKHDLAEKI 207
GL G+ D A K+
Sbjct: 344 SGLCKLGEVDEAVKV 358
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 4/193 (2%)
Query: 15 LLVQGLLNAGYLESAKQMVNKM-IKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ ++ + G Q V+ M ++ G + +N L+ + +++ + ++
Sbjct: 129 VFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVS 188
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DVST+ ILI A+ +A I A L+ + + G P + I++G G D
Sbjct: 189 RGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDG 248
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EMGLTPISRCFDLVT 192
A ++ G L+ + GR EA ++ EM+ G P F+++
Sbjct: 249 AMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLV 308
Query: 193 DGLKNCG--KHDL 203
+GL G KH L
Sbjct: 309 NGLSKTGHVKHAL 321
>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ P V ++L+ G A ++ AKQ+ N+MI QG PD T+N+LI +C+ G
Sbjct: 20 MITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGR 79
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ ++ K G+ D+ Y IL+ + K G + +AFRL + P +Y
Sbjct: 80 LREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNI 139
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G DA FSE+ +KG PN +YTT+I + G EA M E G
Sbjct: 140 LVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 199
Query: 181 LTPISRCFDLVTDGL 195
P ++++ G
Sbjct: 200 CPPDEFSYNVIIRGF 214
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A+++ + MI +G PD+ +N LI CK+ ++ ++Y + G D TY LI
Sbjct: 13 ARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIH 72
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ + G + EA L N+ ++G+ P Y+ ++ G ++G AF F ++ P
Sbjct: 73 GLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKP 132
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ +Y L+ + G +A E+ GL P + + + +GL C + L E +E
Sbjct: 133 DLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGL--CKEGLLDEALE 190
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ GL GYL A ++ M PDL +N L++ +CKSG
Sbjct: 90 MHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGN 149
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G +V Y +I + K G++DEA N+ EDG P Y
Sbjct: 150 LKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNV 209
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + A E++ +G
Sbjct: 210 IIRGFLQHKDESRAVHLIGEMRDRG 234
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
EA +L ++ G+ P Y +I G + + D A ++E+ ++G P++ Y TLI
Sbjct: 12 EARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLI 71
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ GR EA + M + G P + ++ DGL
Sbjct: 72 HGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGL 109
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+G P + ++++ G A ++ A+Q++ +M + G PD+ T+NS++ +CK+ +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+Y + G DV T LI + K+ +D+A +LL + +G P Y
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + Q D + FFSE+ KG P Y+ +I + R + L M E G
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+TP + + V DGL +D A ++ +L
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKL 611
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL + L+ A++++ +M + GS PD+ + LI CK+ +++ + + + G
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY I+I + K+ + + LL ++E G P +Y +I G + +D+A+
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAY 606
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +K G P Y L+ + R EA + L M G P + ++ V DG
Sbjct: 607 ELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF 666
Query: 196 KNCGKHDLAEKIEQ 209
+HD A ++ Q
Sbjct: 667 WKSAEHDKAFRLFQ 680
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V +++ L + + ++ M+++G PD + S+I+ +CKS
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y + + G V TY +L+ + K +DEA LL + DG P Y
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G ++ + D AF F +K +G P +Y+ L+T + +A E E G
Sbjct: 662 VFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ L+ +G A + M+++ P TFN +I+ CK G+
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G D+ TY I+I +A ID+A +LL + E G P Y
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q D+A+ + ++ G+ + +TLI + R +A L EM G
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511
Query: 181 LTPISRCFDLVTDGL 195
P + ++ G
Sbjct: 512 SAPDVVAYTILIHGF 526
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + +++GL + G ++SA M ++ P + T+ L++ +CKS
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSAR 251
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G +V TY LI K G +DEA L + ++E+ +P Y
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ + D E+ G PN Y TL+ + G++++A N M
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P F+L+ D G+ DLA ++ QL
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + L+ G G ++ A + N+M++ PD+ T+N LI+ CK
Sbjct: 262 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 321
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G + TY L+ ++ K+G +AF L ++ P +
Sbjct: 322 PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNL 381
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + GQ D A+ F + +G P+ Y +I+ R R +A L MTE G
Sbjct: 382 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P ++ + GL C + E E EV
Sbjct: 442 CPPDVVTYNSIVSGL--CKASQVDEAYEVYEV 471
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +LV L + + A ++ MI+ G P++ T+N+LI CK G ++ V +
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + DV TY ILI K + +LL +V+ G P Y ++ +
Sbjct: 294 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 353
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G++ DAF + + P+ + +I M + G+ A MT+ G P
Sbjct: 354 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 413
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++++ G + D A ++
Sbjct: 414 YNIMISGACRANRIDDARQL 433
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 73 KLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
+ G C+ D TY LI KA +A+RLL + + G P ++Y IIKG G+
Sbjct: 159 RCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRV 218
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
D A + +++ + P+ YT L+ + R +A+ L +M E G P ++ +
Sbjct: 219 DSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTL 277
Query: 192 TDGLKNCGKHDLA 204
+G G D A
Sbjct: 278 INGFCKLGNMDEA 290
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 66/156 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P ++ GL + + A ++ M + G P + T+N L++ +CK
Sbjct: 577 MLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D TY + K+ D+AFRL + G +P P +Y+
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
++ + D A + E G + + TL
Sbjct: 697 LLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 34/202 (16%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLG--------------------------- 75
PD T+++LI CK+ + + + + K G
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224
Query: 76 ------SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+CA V TY IL+ A+ K+ I +A +L +++E G P Y +I G +
Sbjct: 225 YRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 284
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
G D+A F+++ P+ Y LI + R + A L EM + G P +
Sbjct: 285 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 344
Query: 189 DLVTDGLKNCGKHDLAEKIEQL 210
+ + D L GK+ A + Q+
Sbjct: 345 NTLMDSLVKSGKYIDAFNLAQM 366
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P VR L+ GLL G L+ A +++++ +++G PD+ T+NS+I CK G
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ +C+ G ++ TY LI + KAG I+ A L + G YA
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G AF F E+ +KG PP+ VY+ LI C + G +A + +E + G
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791
Query: 181 LTPISRCFDLVTDGLKNCGK 200
S + + DG GK
Sbjct: 792 FASTSS-LNALMDGFCKSGK 810
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV+G+ G +E A ++N+MI G PD +T+N++IE K ++ + K
Sbjct: 382 LVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSN 441
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
T ++I + + G I++A R+ +V G P +Y +IKG + G+F +A
Sbjct: 442 LVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAV 501
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ KG P+ Y ++I + + EA +YL+EM E GL P + + G
Sbjct: 502 RILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGY 561
Query: 196 KNCGKHDLAEK 206
G+ +A++
Sbjct: 562 CKSGEMQVADR 572
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ AG + K+++ +M ++G P L T+N +I +C++GEV+ E+ + K G
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
ADV TY ILI K EA +L + G P Y +I G R+G +AF
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAF 361
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ +G N Y L+ + G +A L EM +G+ P ++ ++ + +G
Sbjct: 362 RVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEG 420
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G + G A ++ +M+ +G +L T+N+L++ +CK G+
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + +G D TY +I K LL + + P
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G R G +DA F + G PN +YTTLI + GRF EA L M + G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK--IEQLEVSLR 215
+ P C++ V GL K + A+ +E +E L+
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK 548
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G A + M+ + PD+ T+++LI + ++G+++ +E+ + G
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +I K G I +AF+L + + G +P Y +I G + G+ + A
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAR 711
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F I KG N Y T+I + G +A EMT G+ P S + + DG
Sbjct: 712 ELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGC 771
Query: 196 KNCGKHDLA 204
+ G + A
Sbjct: 772 RKEGNTEKA 780
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL + +E AK + +MI++G P++ T+ +LI CKSGE
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + LI K G EA + ++ +P Y+
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSA 626
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME-MTE 178
+I G R G+ A SE KG P+ Y ++I+ C +GG + A L E M +
Sbjct: 627 LIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG--IGKAFQLHEYMCQ 684
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G++P ++ + +GL G+ + A ++
Sbjct: 685 KGISPNIITYNALINGLCKAGEIERAREL 713
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 82/196 (41%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+LL+ G G + A + G L N L+ + K+ ++E Y + +
Sbjct: 170 ELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLE 229
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
DV TY LI A +AG E RLL + E G +P Y +I G R G+ D+
Sbjct: 230 ANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDE 289
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF + KG + Y+ LI G+ R EA L EM GL P + + D
Sbjct: 290 AFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALID 349
Query: 194 GLKNCGKHDLAEKIEQ 209
G G A ++++
Sbjct: 350 GFMRQGDSGEAFRVKE 365
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L++G + G + A +++ M K+G PD+ +NS+I +CKS +
Sbjct: 472 MVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRK 531
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G +V TY LI K+G + A R ++ G P +
Sbjct: 532 MEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTA 591
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G +A F + + P+ Y+ LI R G+ A L E E G
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 181 LTPISRCFDLVTDGL 195
L P ++ + G
Sbjct: 652 LVPDVFTYNSIISGF 666
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 4/196 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V L+ G +G ++ A + +M+ G P+ +LI+ CK G
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601
Query: 61 VEFCVEMYYSVCKLGSCA--DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
++ C LG DV TY LI + + G + A LL +E G P Y
Sbjct: 602 TTEATSIFR--CMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTY 659
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
II G ++G AF + KG PN Y LI + G A +
Sbjct: 660 NSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPG 719
Query: 179 MGLTPISRCFDLVTDG 194
GL + + + DG
Sbjct: 720 KGLAHNAVTYATIIDG 735
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P +++ GL G +E A ++ M+ G P+ + +LI+ + G
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + K G DV Y +I + K+ ++EA L ++E G P Y
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A +F E+ G PN V T LI + G EA + M
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P R + + GL GK
Sbjct: 617 VHPDVRTYSALIHGLLRNGK 636
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 8/218 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-- 58
M +KG +P + ++++ GL AG ++ A ++ M K+G D+ T++ LI+ K
Sbjct: 262 MEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKR 321
Query: 59 -GEVEFCV-EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
E + + EM+ K G A Y LI + G EAFR+ ++ G
Sbjct: 322 CTEAKLMLEEMFSKGLKPGHVA----YTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLF 377
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y ++KG + G + A +E+ + G P+ Y +I + + L EM
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ L P + ++ +GL G + A ++ ++ VSL
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSL 475
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G +G L A ++ ++M +G PD +++LI+ K G E + ++ + G
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A S+ L+ K+G + EA +LL ++V+ P Y +I + G +A
Sbjct: 792 -FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAE 850
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FF +++ + PN YT L++ GR E EM + P + ++ D
Sbjct: 851 QFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAH 910
Query: 196 KNCGKH 201
G H
Sbjct: 911 LKEGDH 916
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 3/215 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF + L+ G +G + A Q++ M+ + PD T+ LI+ CK+G ++
Sbjct: 790 KGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKE 848
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + K + TY L+ + AG E F L ++ P ++ +I
Sbjct: 849 AEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMID 908
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT- 182
+ G ++ KG ++ V LI R E L ++ E GL
Sbjct: 909 AHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNL 968
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ C LV GK D A ++ + V + V
Sbjct: 969 SLATCSTLVR-CFHKAGKMDGAARVLKSMVRFKWV 1002
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 5/206 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+ ++ +L L N+ A +VN+MI S E +SLI++ CK EF
Sbjct: 96 GFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKS-CK----EFD 150
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + +++LI K G+ DEA +G ++
Sbjct: 151 LNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSD 210
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + + + F++ + + YT LI R G E L EM E G +P
Sbjct: 211 LLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPS 270
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
+++V GL G+ D A ++++L
Sbjct: 271 LVTYNVVIGGLCRAGEVDEAFELKKL 296
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 97/196 (49%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + +QGL G L++A +MV ++I QG PD+ T+N LI +CK+ + +
Sbjct: 245 RGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQE 304
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ G D TY LI K GM+ A R+L N V +G P Y +I
Sbjct: 305 AEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLID 364
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ + A F+E KG PN +Y TLI G +EAA EM+E GL P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIP 424
Query: 184 ISRCFDLVTDGLKNCG 199
+ F+++ +GL G
Sbjct: 425 EVQTFNILVNGLCKMG 440
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ P + ++L+ G +E+A ++++ M+ G DPD+ T+NSL+ +CK+ +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E Y ++ + G ++ T+ IL+ ++ + +D+A LL + NP +
Sbjct: 512 YEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGT 571
Query: 121 IIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G D A+ F ++ ++ + P Y +I A EM +
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK--IEQLE 211
L P + L+ DG G DL K +E +E
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMME 665
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V +V G + + ++ KM+ G L TFN L+ +CK G+
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGD 231
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ C ++ V K G ++ TY I + + G +D A R++ L++ G P Y
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNY 291
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F +A + ++ +G P+ Y TLI +GG A L+ G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNG 351
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL + G+ + A
Sbjct: 352 FVPDEFTYRSLIDGLCHEGETNRA 375
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + L++GL N G + A Q+ ++M ++G P+++TFN L+ +CK G V
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D+ T+ ILI S ++ A +L ++++G +P Y ++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLN 504
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + +++D + + KG PN + L+ R + +A L EM + P
Sbjct: 505 GLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNP 564
Query: 184 ISRCFDLVTDGL-KNC---GKHDLAEKIEQL 210
+ F + DG KN G + L K+E++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEV 595
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE------- 60
P V + ++ L+++GY + A ++ +M +G PD+ +F +++ C++
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168
Query: 61 -------------VEFCV---------------EMYYSVCKLGSCADVSTYKILIPAVSK 92
V +C E++ + G +ST+ L+ + K
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK 228
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G + E +LL +++ G P Y I+G ++G+ D A + +G P+
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVT 288
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y LI + +F EA YL ++ GL P S ++ + G G LAE+I
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + ++L++ L L+ A ++ +M + +PD TF +LI+ CK+G+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 61 VEFCVEMYYSV--CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
++ ++ + + SC+ TY I+I A ++ + A +L +V+ P Y
Sbjct: 582 LDGAYTLFRKMEEVYMVSCS-TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G + G D + F E+ G P+ +I R EAA + M +
Sbjct: 641 RLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 179 MGLTP--ISRCFD 189
GL P ++ FD
Sbjct: 701 KGLVPEAVNTIFD 713
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ ++G P + L+ G G ++ A++++ + G PD T+ SLI+ +C GE
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ G +V Y LI +S G+I EA +L + E G P +
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G DA + KG+ P+ + LI + A L M + G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+ P ++ + +GL K++
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYE 513
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 91/207 (43%), Gaps = 2/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P L+ GL + G A + N+ + +G P++ +N+LI+ + G +
Sbjct: 351 GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G +V T+ IL+ + K G + +A L+ ++ G+ P + +I G
Sbjct: 411 AQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + ++A + G P+ Y +L+ + ++ + M E G P
Sbjct: 471 YSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPN 530
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLE 211
F+++ + L C H L + + LE
Sbjct: 531 LFTFNILLESL--CRYHKLDKALGLLE 555
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ P V +V GL AG LE A+++ ++M K+G P + T+N+LI+ ICK G VE
Sbjct: 267 DESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVE 326
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V ++ + G +V TY +LI + AG ID +LL + G P Y +I
Sbjct: 327 DAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLI 386
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHP--PNRPVYTTLIT---MCGRGGRFVEAANYLMEMT 177
+ F G+ + F ++ KG PN+ Y +I+ M R V AA + EM
Sbjct: 387 RYLFEEGEMEKGLDLFEKMS-KGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMV 445
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ G P F+ V +GL G +L+ K+ +++ R
Sbjct: 446 DRGYLPRRFMFNRVLNGLMLTGNQELSRKLLRMQEKYR 483
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
DL FNSL++ + KS + ++ + + DV TY L + A +L
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRALEQRFT-PDVVTYNTLADGWCRVKDTSRALDVL 222
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-----PPNRPVYTTLIT 158
+VE G P + Y I+KG FR GQ A+ FF ++K +G P+ YTT++
Sbjct: 223 RLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVH 282
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A EM + G P
Sbjct: 283 GLGVAGQLEKARKVFDEMAKEGCAP 307
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 45/240 (18%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC------------------- 56
L+ L + + A +V + ++Q PD+ T+N+L + C
Sbjct: 171 LLDALSKSRHAGKAASLV-RALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESG 229
Query: 57 ----------------KSGEVEFCVEMYYSVCKLG----SCA-DVSTYKILIPAVSKAGM 95
++G++ + + + K G SC DV +Y ++ + AG
Sbjct: 230 IAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQ 289
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+++A ++ + ++G P + Y +I+ ++G +DA F + +KG+ PN YT
Sbjct: 290 LEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTV 349
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH----DLAEKIEQLE 211
LI G+ L M G PI + ++++ L G+ DL EK+ + E
Sbjct: 350 LIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGE 409
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL + +E A Q++++MI +G PD T+NSL+ CK+G+++ ++ ++
Sbjct: 522 NTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTS 581
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY LI + KAG + A RLL ++ G P Y P+I+ F+R + +
Sbjct: 582 SGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHE 641
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F E+ K PP+ Y + +C GG EA ++ +EM E G P F ++
Sbjct: 642 AMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLA 701
Query: 193 DGL 195
+GL
Sbjct: 702 EGL 704
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P + LV GL G+ + A ++V+ M+ G DPD+ T+NSLI +CK GE+E
Sbjct: 302 EGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEE 361
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
V++ + + TY +I ++ K +DEA + L G P + +I+
Sbjct: 362 AVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQ 421
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G A F E+K KG P+ Y LI + EA N L EM G
Sbjct: 422 GLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCAR 481
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++ + DG + + AE+I
Sbjct: 482 NVVIYNTLIDGFCKNKRIEEAEEI 505
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + + L+ GL G +E A +++++M+ + P+ T+N++I ++CK V+
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + G DV T+ LI + + A L + G P Y +I
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ ++A E+++ G N +Y TLI + R EA EM G++
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517
Query: 185 SRCFDLVTDGL-KNCGKHDLAEKIEQL 210
S ++ + DGL K+ D A+ ++Q+
Sbjct: 518 SVTYNTLIDGLCKSKRVEDAAQLMDQM 544
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P V + L+QGL + +SA + +M +G PD T+N LI+++C S +
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E + + + +L CA +V Y LI K I+EA + + G + Y
Sbjct: 464 LEEALNLLKEM-ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + +DA ++ ++G P++ Y +L+T + G +AA+ + MT
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + + GL G+ +A ++
Sbjct: 583 GCNPDIVTYATLISGLCKAGRVQVASRL 610
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G G ++ A + + + +G PD T+N+L+ +CK G + +E+ ++
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLL 336
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY LI + K G I+EA ++L +V +P Y II + + D+
Sbjct: 337 GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDE 396
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + KG P+ + +LI A + EM G P ++++ D
Sbjct: 397 ATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLID 456
Query: 194 GLKNCGKHDLAEKIEQLE 211
L C L E + L+
Sbjct: 457 SL--CSSRKLEEALNLLK 472
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R ++L+ L++A L+ + + M+++ D+ TFN LI+ +CK+ +V + M
Sbjct: 166 PDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILM 225
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D +T+ ++ + G +D A R+ +VE G +I G +
Sbjct: 226 MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCK 285
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G+ D A F E +G P++ Y TL+ + G A + M GL P
Sbjct: 286 QGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYT 345
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + GL G+ + A KI VS
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVS 371
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + ++ L ++ A ++ + +G PD+ TFNSLI+ +C S
Sbjct: 369 MVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + G D TY +LI ++ + ++EA LL + +G +Y
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A F E++++G + Y TLI + R +AA + +M G
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548
Query: 181 LTP 183
L P
Sbjct: 549 LRP 551
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ L ++ LE A ++ +M G ++ +N+LI+ CK+
Sbjct: 439 MKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKR 498
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G D TY LI + K+ +++A +L+ ++ +G P Y
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL--MEMTE 178
++ + G A + G P+ Y TLI+ + GR A+ L ++M
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Query: 179 MGLTP 183
M LTP
Sbjct: 619 MVLTP 623
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++ L A + A M+ +M G PD TF ++++ + G ++ + + + +
Sbjct: 207 NILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266
Query: 74 LG-SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G C DV T +LI K G ID+A + V +G P Y ++ G + G
Sbjct: 267 YGCPCTDV-TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAK 325
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A + + G P+ Y +LI+ + G EA L +M +P + ++ +
Sbjct: 326 HAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAII 385
Query: 193 DGLKNCGKHDLAEKIEQLEVS 213
L + D A +I +L S
Sbjct: 386 SSLCKENRVDEATEIARLLTS 406
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++QG + G L+ A ++ +M++ G T N LI CK G
Sbjct: 229 MPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGR 288
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G D TY L+ + K G A ++ ++ G +P Y
Sbjct: 289 IDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNS 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++A ++ + PN Y +I+ + R EA +T G
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P F+ + GL H A
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSA 432
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + L+ GL +G LE A M KM ++G +PD+ + SL++ + K G+
Sbjct: 729 MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ ++ K DV TY LI ++ K G ++EA+ N + G P +Y+
Sbjct: 789 LSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G D A F E++ + PPN Y L++ + GR A L EM ++G
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P ++++ DG+ G D AE
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAE 933
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
P + + V +G L+ A + + +MIK G DP + TF LI+ + KSG ++
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + L +V TY L+ ++KAG ++EA + + E+ +P Y +I G
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G+ D A F E+K +G PN Y +I++ G+ GR EA ++ E G P
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDV 462
Query: 186 RCFDLVTDGLKNCGKHD 202
++ + D L G+ D
Sbjct: 463 FTYNTLIDVLGKGGQMD 479
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV GL AG L+ A ++ +M KQG +P + T++SL+ + K + E + +
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G ADVSTY ++I + K+ +D+A + + E+G P Y ++ +
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ D A F+E++ P+ VY ++ + R EA + M + P
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740
Query: 188 FDLVTDGLKNCGKHDLA 204
+ + DGL G+ + A
Sbjct: 741 YTSLLDGLGKSGRLEEA 757
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K P V L+ L G +E A I +G P++ ++SLI++ K G
Sbjct: 799 MAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ + + ++ TY L+ ++KAG ++ A +LL + + G P Y
Sbjct: 859 VDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNI 918
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D+A +F +K KG P+ +T+LI G+ + +EA M E G
Sbjct: 919 LIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG 978
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQLEV 212
P ++++ D L GK H+ A +++V
Sbjct: 979 YNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKV 1011
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + +++ L+ G+ SA + K+ + PD +TF + + +SG
Sbjct: 243 MKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + K G V T+ +LI A+ K+G IDEA + + + +P Y
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ ++A F E+K P+ Y TLI G+ G A EM + G
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRG 422
Query: 181 LTPISRCFDLVTDGLKNCGK--------HDLAEK 206
L P R ++++ L G+ HDL E+
Sbjct: 423 LVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ 456
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 87/179 (48%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ A ++ N+M G +P +N ++E + K G V ++ + + D T++I
Sbjct: 233 VSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRI 292
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+ + +++G +D A + +++ G +P + +I + G D+A FF+ +K
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN YTTL+ + GR EA +EM E +P + ++ + DGL G+ D+A
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMA 411
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V L+ G ++ A ++ +M ++ P++ T+N+L+ + K+G +
Sbjct: 837 KGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNV 896
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + K+G D+ TY ILI V K GM+DEA + E G P + +I+
Sbjct: 897 AEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIE 956
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + +A F ++ +G+ P+ Y LI + GR G+ EAA EM G P
Sbjct: 957 SLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V L++ L + ++ A + +M ++G +P L + +L+ ++ K +
Sbjct: 624 MVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
++F ++++ + + D Y I++ + K+ +DEA +L+ ++ N P L Y
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM--KNQNILPDLFTY 741
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G + G+ ++AF F+++ +GH P+ YT+L+ + G+GG+ A M +
Sbjct: 742 TSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
P + + D L G+
Sbjct: 802 KRCVPDVVTYSSLIDSLGKEGR 823
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P V L+ L G L A + M K+ PD+ T++SLI+++ K G
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + G +V Y LI + K GM+D A L + P Y
Sbjct: 824 VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + A E++ G P+ Y LI G+ G EA +Y M E G
Sbjct: 884 LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F + + L K
Sbjct: 944 IVPDVITFTSLIESLGKVDK 963
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V +L+ L+ +G ++ A + N M P++ T+ +L+ + K+G
Sbjct: 313 MIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGR 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + + D Y LI + KAG D A L + + G P Y
Sbjct: 373 LEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNI 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A+ F ++K +G P+ Y TLI + G+GG+ + + EM E G
Sbjct: 433 MISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 36/247 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + L+ L+ ++ A Q+ N++ + PD +N ++ + KS
Sbjct: 659 MKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPS 116
V+ ++ S+ D+ TY L+ + K+G ++EAF + + E+GH P + S
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778
Query: 117 L-------------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L Y+ +I + G+ ++A+ FF KG
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN VY++LI G+ G A EM P ++ + GL G+ ++AE
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898
Query: 206 K-IEQLE 211
K +E++E
Sbjct: 899 KLLEEME 905
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ E + + ++M+++G D+ T++ +I +CKS +
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + + G + YK L+ ++ K ID A ++ + L E P +Y
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D+A +K + P+ YT+L+ G+ GR EA N +MTE G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + D L GK
Sbjct: 769 HEPDVVAYTSLMDVLGKGGK 788
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + L+ GL AG L A++++ +M K G PDL T+N LI+ + K G V+
Sbjct: 876 PNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESY 935
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G DV T+ LI ++ K + EA L ++ E+G+NP Y +I R
Sbjct: 936 FKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGR 995
Query: 128 RGQFDDAFCFFSEIKIKGHPPN 149
G+ +A F E+K+KG P+
Sbjct: 996 AGKVHEAAMIFHEMKVKGCMPD 1017
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T+N+L+ +G V+ V++ + K V TY L+ + KAG +DEA LL +
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+ G P Y+ ++ ++R Q +++ F E+ KG + Y+ +I +
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+A + M E G+ P+ + + L K D A +I
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQI 690
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ ++ G+++ A +++ M K P + T+ +L++ + K+G ++ V + + K
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY L+ + K +E+ L +V G S Y+ +I + D
Sbjct: 592 QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ 651
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F +K +G P Y TL++ + + A E+ E L P + ++++ +
Sbjct: 652 ALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVN 711
Query: 194 GLKNCGKHDLAEKI 207
GL + D A K+
Sbjct: 712 GLVKSNRVDEACKL 725
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ G+ G ++ A+ +M ++G PD+ TF SLIE++ K +
Sbjct: 904 MEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDK 963
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
+ E++ S+ + G V TY +LI + +AG + EA + H + G P
Sbjct: 964 LLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V TY ++I ++ A D ++L + ++GH L +++ A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F+++K G P+ +Y ++ + +GG + A ++ + + P ++ F +
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296
Query: 195 LKNCGKHD-LAEKIEQL 210
G+ D AE I+++
Sbjct: 297 FNRSGRLDPAAEPIQEM 313
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ P V +V GL AG LE A+++ ++M K+G P + T+N+LI+ ICK G VE
Sbjct: 267 DESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVE 326
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V ++ + G +V TY +LI + AG ID +LL + G P Y +I
Sbjct: 327 DAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLI 386
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHP--PNRPVYTTLIT---MCGRGGRFVEAANYLMEMT 177
+ F G+ + F ++ KG PN+ Y +I+ M R V AA + EM
Sbjct: 387 RYLFEEGEMEKGLDLFEKMS-KGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMV 445
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+ G P F+ V +GL G +L+ K+ +++ R +
Sbjct: 446 DRGYLPRRFMFNRVLNGLMLTGNQELSRKLLRMQEKYRRL 485
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
DL FNSL++ + KS + ++ + + DV TY L + A +L
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRALEQRFT-PDVVTYNTLADGWCRVKDTSRALDVL 222
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-----PPNRPVYTTLIT 158
+VE G P + Y I+KG FR GQ A+ FF ++K +G P+ YTT++
Sbjct: 223 RLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVH 282
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A EM + G P
Sbjct: 283 GLGVAGQLEKARKVFDEMAKEGCAP 307
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 45/240 (18%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC------------------- 56
L+ L + + A +V + ++Q PD+ T+N+L + C
Sbjct: 171 LLDALSKSRHAGKAASLV-RALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESG 229
Query: 57 ----------------KSGEVEFCVEMYYSVCKLG----SCA-DVSTYKILIPAVSKAGM 95
++G++ + + + K G SC DV +Y ++ + AG
Sbjct: 230 IAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQ 289
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+++A ++ + ++G P + Y +I+ ++G +DA F +++KG+ PN YT
Sbjct: 290 LEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTV 349
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH----DLAEKIEQLE 211
LI G+ L M G PI + ++++ L G+ DL EK+ + E
Sbjct: 350 LIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGE 409
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ P V +L++GL +AG ++ +++ +M G +P ++T+N LI + + GE
Sbjct: 335 MRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGE 394
Query: 61 VEFCVEMYYSVCKLGSC-ADVSTYKILIPAV---SKAGMIDEAFRLLHNLVEDGHNPFPS 116
+E ++++ + K C + TY I+I A+ +A + A R++ +V+ G+ P
Sbjct: 395 MEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRF 454
Query: 117 LYAPIIKG 124
++ ++ G
Sbjct: 455 MFNRVLNG 462
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K NP V +L+ L G ++ AK ++ M K+G P++ ++N+L++ C GEV+
Sbjct: 214 KNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQN 273
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+M++++ + G +V +Y I+I + K+ +DEA LL ++ P Y+ +I
Sbjct: 274 AKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLID 333
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ A E+ +G P + YT+L+ + +A M+M E G+ P
Sbjct: 334 GFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DGL G+H A+K+ Q
Sbjct: 394 NKYTYTALIDGLCKGGRHKNAQKLFQ 419
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG NP V ++++ L + ++ A ++ +++ + P+ T++SLI+ CK G
Sbjct: 281 MVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGR 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G ADV TY L+ A+ K +D+A L + E G P Y
Sbjct: 341 ITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTA 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + +KG N Y +I+ + G EA +M E G
Sbjct: 401 LIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENG 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+++ L ++D AEK+
Sbjct: 461 CIPDAVTFEIIIRSLFEKDQNDKAEKL 487
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V + L+ G G +++AKQM + M+++G +P++ ++N +I+ +CKS
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + V + TY LI K G I A LL + G Y
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + D A F ++K +G PN+ YT LI +GGR A + G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++++ GL G D A
Sbjct: 426 CRINVWTYNVMISGLCKEGMLDEA 449
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ + G + + ++ K++K G P+ T N+L++ +C GE
Sbjct: 36 MQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGE 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + V G D +Y L+ + K G A +LL + + P +Y
Sbjct: 96 VKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + ++A+ +SE+ +G PN Y+TLI G+ +EA L EM
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++ D L GK
Sbjct: 216 INPNVYTYTILMDALCKEGK 235
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G ++ + +K++ QG D ++ +L+ +CK GE
Sbjct: 75 GYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSA 134
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPII 122
+++ + + +V Y +I + K +++EA+ L + D FP++ Y+ +I
Sbjct: 135 LKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM--DARGIFPNVITYSTLI 192
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G GQ +AF +E+ +K PN YT L+ + G+ EA N L MT+ G+
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252
Query: 183 PISRCFDLVTDG 194
P ++ + DG
Sbjct: 253 PNVVSYNTLMDG 264
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF L+ GL G SA +++ + + + P++ +N++I+ +CK V
Sbjct: 109 QGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++Y + G +V TY LI AG + EAF LL+ ++ NP Y ++
Sbjct: 169 AYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD 228
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ +A + + +G PN Y TL+ G A M + G+ P
Sbjct: 229 ALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288
Query: 184 ISRCFDLVTDGL 195
++++ D L
Sbjct: 289 NVYSYNIMIDRL 300
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G + SA ++ +M +G D+ T+ SL++ +CK+ ++ ++ + + G
Sbjct: 331 LIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY LI + K G A +L +L+ G Y +I G + G D+A
Sbjct: 391 IQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEAL 450
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
S+++ G P+ + +I + +A L EM
Sbjct: 451 AMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ GL G ++A+++ ++ +G ++ T+N +I +CK G
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGM 445
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
++ + M + + G D T++I+I ++ + D+A +LLH ++
Sbjct: 446 LDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 64/153 (41%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + FN ++ ++ K + ++ + G D+ T ILI G + +F +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L +++ G+ P ++KG +G+ + F ++ +G ++ Y TL+ +
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
G A L + + P ++ + DGL
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGL 160
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KGF P V ++ GL G + A +MV +M ++G +PD+ T+ +++ +C++G+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+++ + + G A+ Y LI + K I+ A++LL + G+ P Y
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL--MEMTE 178
I+ G R G+ +A FF + +G+ P+ Y L+ + G+ EA M+M +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + DG K D A K+
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKL 209
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + +++ GL + A+ + ++MI++ PD+ TFN L++ +CK+G+
Sbjct: 353 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + D T L+ + + DEA RL +VE G +
Sbjct: 413 LDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNI 472
Query: 121 IIKGAFRRGQFDDAFCFF-SEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G R G+ A FF S +K G P+ YTTL+ GR +A +Y +MT
Sbjct: 473 VLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTG 532
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G P ++ + +GL+ G+H A+++ Q
Sbjct: 533 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQ 563
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 5/212 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM--IKQGSDPDLETFNSLIETICKS 58
M +G++P V + L+ L G + A + M + PDL T+N+LI+ C+
Sbjct: 141 MPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRV 200
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
+ + ++++ V G D TY ++ +++ +DEA + +V+ G P + Y
Sbjct: 201 EKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATY 260
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ ++ G R G + E+ K P+ + +I M + + +A L EM++
Sbjct: 261 SIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSK 320
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+G P ++++ DGL C K +L +K +L
Sbjct: 321 IGAVPDVVTYNILLDGL--C-KTNLVDKAHEL 349
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 88/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P +++ G G + ++ +M ++ PD+ N++I+ +CK+ +
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + K+G+ DV TY IL+ + K ++D+A L +V++G P Y+
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + DA F + + P+ + L+ + G+ EA + L M+E
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427
Query: 181 LTP 183
+ P
Sbjct: 428 VLP 430
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG+ P + ++ GL ++ A++M KM+ G P+ T++ ++ C+ G +
Sbjct: 216 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMAR 275
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
C+E+Y + + DV +I + KA +D+A ++L + + G P Y ++
Sbjct: 276 CLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 335
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + D A FS + G P+ Y+ ++ + + +A M E L P
Sbjct: 336 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 395
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
F+++ DGL GK D A+ +
Sbjct: 396 DVVTFNILMDGLCKAGKLDEAKDL 419
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 37/182 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P V ++L+ GL AG L+ AK +++ M + PD T +L+ +C+
Sbjct: 388 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKR 447
Query: 61 VEFCVEMYYSVCKLGSCADV-------------------------------------STY 83
+ V ++ + + G+ ADV TY
Sbjct: 448 TDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTY 507
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ A+ +AG +D+A + G P Y ++ G ++G+ A +K
Sbjct: 508 TTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 567
Query: 144 KG 145
KG
Sbjct: 568 KG 569
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ P + ++ GL AG L+ A+++ ++M K+G P + T+N+LI+ ICK G VE
Sbjct: 265 DESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVE 324
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V ++ + + +V TY +LI + G ID A +L+ + +G P Y +I
Sbjct: 325 DAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLI 384
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHP--PNRPVYTTLIT---MCGRGGRFVEAANYLMEMT 177
+ +F G+ + A C F + KG PN+ Y +I+ + R AA +MEM
Sbjct: 385 RYSFEEGEIEKALCLFERMS-KGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMV 443
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
E G P + V +GL G ++ + +++ R +
Sbjct: 444 ERGYLPRRFMLNRVLNGLMLTGNQQISRDLLRMQEKYRRL 483
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++ F P V + L G A A ++ +M + G P T+N +++ ++G+++
Sbjct: 190 ERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQ 249
Query: 63 FCVEMYYSVCKLG----SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ + K G SC D+ +Y +I + AG +D+A +L + ++G P +
Sbjct: 250 HAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVAT 309
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I+ ++G +DA F ++ K + PN YT LI G+ A + M
Sbjct: 310 YNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMK 369
Query: 178 EMGLTPISRCFDLV 191
G P+ + ++++
Sbjct: 370 GEGCEPVVQTYNVL 383
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
DL FNSL++ + KS + ++ + DV TY L +A A LL
Sbjct: 162 DLPLFNSLLDALGKSRHASKAASLVRALERRFP-PDVVTYNTLADGWCRAKDTSRALDLL 220
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-----PPNRPVYTTLIT 158
+ E G P + Y I+KG FR GQ A+ FF ++K +G P+ YTT+I
Sbjct: 221 RQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIH 280
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A EM++ G TP
Sbjct: 281 GLGVAGQLDKARKLFDEMSKEGCTP 305
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L + + A +V + +++ PD+ T+N+L + C++ + +++ + + G
Sbjct: 169 LLDALGKSRHASKAASLV-RALERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESG 227
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-----NPFPSLYAPIIKGAFRRGQ 130
+TY I++ +AG I A+ + + G P Y II G GQ
Sbjct: 228 VTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQ 287
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
D A F E+ +G P+ Y LI + + G +A +M P + +
Sbjct: 288 LDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTV 347
Query: 191 VTDGLKNCGKHDLAEKI 207
+ GL + GK D A K+
Sbjct: 348 LIRGLCHVGKIDRAMKL 364
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ +P +L+ GL AG L A+ + K++ G P + SLI +C +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + G TY ++I A K GM++EA L+ ++EDGH P Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ ++A F+E++ G PNR + T+I + + +A EM
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P S + ++ DGL GK + A K+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKL 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 2/206 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ L+ GL AG ++ A+++++ M+ G PD+ T+N+L+ C++G+
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + G +V TY L+ + KA + EA + + G P Y
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G GQ D F E+ G P+ VY TL + GR A L E E
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 495
Query: 181 LTPI--SRCFDLVTDGLKNCGKHDLA 204
+ + DGL + GK ++A
Sbjct: 496 RSEAWGDEVYRFAVDGLLDAGKMEMA 521
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L+ GL A + A+++ M ++G P T+N +I+ CK G +E
Sbjct: 40 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEA 99
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G DV TY ++ + K+G ++EA L + + G P + II G
Sbjct: 100 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILG 159
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++ + D A F E++ + PP+ Y LI + G+ EA M + G+TP
Sbjct: 160 LCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS 219
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ +++V G+ C + L E +E + S+RS
Sbjct: 220 AVTYNVVIHGM--CLAYTLDEALELFK-SMRS 248
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P +L+ GL AG L A ++ +M+ G P T+N +I +C +
Sbjct: 176 MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ S+ G T+ ILI A K G +DEAFRLL + +DGH P Y+
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + DDA ++ + P TLI + GR EA L M G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P ++ + G G+ + A ++
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERAREL 382
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D G P V L+ GL + ++ A+ ++ M+K+ P + T N+LI +CK+G
Sbjct: 281 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ ++ G DV TY L+ +AG + A LL ++V G P Y
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + +A F+++K G PN YT LI G+ EM G
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLEVSLRS 216
++P + + L G+ A E + + SLRS
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + ++ GL +G +E A + N+M + G P+ + N++I +C+ +
Sbjct: 106 MIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + D +Y ILI ++KAG ++EA++L +++ G P Y
Sbjct: 166 IDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNV 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D+A F ++ KG P+R + LI + G+ EA L MT+ G
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + GL + + D A +
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHL 312
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G ++ A +++ +M G PD+ T+++LI +C
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + K V T LI + KAG I EA +L +V G +P Y
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R GQ + A S++ +G PN YT L++ + R EA +M G
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 181 LTP 183
P
Sbjct: 426 CAP 428
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++++ G+ A L+ A ++ M +G P TFN LI+ CK G+
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G DV TY LI + +D+A LL ++V+ P
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A + G P+ Y TL+ R G+ A L +M G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 181 LTPISRCFDLVTDGL 195
L P + + GL
Sbjct: 391 LAPNVVTYTALVSGL 405
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
V GLL+AG +E A V M++ G P E SL+ +CKSG+
Sbjct: 509 VDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 552
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V+ +L+ GL G L+ A + ++++ +G PD+ T+ SLI +CK G+
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ +CK G ++ TY LI + K G I +A L + E G Y+
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + +AF F +K+ G PP+ VY LI C + G +A + + M E G
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ + F+ + DG GK
Sbjct: 788 IAS-TPAFNALIDGFFKLGK 806
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G LE A+ + ++M G PD++T+N LIE K +E E+ + K
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKEN 437
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+ ++ + G + A L ++ G P +Y I+KG + G+F++A
Sbjct: 438 LTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAI 497
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+K +G P+ Y T+I + G+ E +YL+EM GL P + G
Sbjct: 498 KILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGY 557
Query: 196 KNCGKHDLAEK--IEQLE 211
G+ AE+ IE L+
Sbjct: 558 CRAGEMQAAERSFIEMLD 575
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G + + A Q+ +M + + T+ +LI +CK G+
Sbjct: 328 MYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGD 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + +G D+ TY LI K +++A+ LL + ++ +
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G G A F E+ G PN +YTT++ + GRF EA L M + G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L+P C++ V G GK
Sbjct: 508 LSPDVFCYNTVIIGFCKAGK 527
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P V + ++ G AG +E K + +MI +G P++ T+ + I C++GE
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + LI K G +AF +++ G P ++
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A FSE+ KG P+ YT+LI+ + G A +M + G
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++ + +GL G+
Sbjct: 683 INPNIVTYNALINGLCKLGE 702
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + G AG +++A++ +M+ G P+ LI+ CK G
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGN 597
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + G DV T+ +LI +SK G + EA + L++ G P Y
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G AF ++ KG PN Y LI + G +A + E G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L S + + G C +L E +
Sbjct: 718 LARNSVTYSTIIAGY--CKSANLTEAFQ 743
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +V+GL+ G E A +++ M QG PD+ +N++I CK+G+
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+E + VEM G +V TY I +AG + A R +++ G P
Sbjct: 528 MEEGKSYLVEMIAK----GLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ +I G + G AF F + +G P+ ++ LI + G+ EA E+
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643
Query: 177 TEMGLTP 183
+ GL P
Sbjct: 644 LDKGLVP 650
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL + G L A ++ +MI G P++ + ++++ + K G E +++ + G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV Y +I KAG ++E L ++ G P Y I G R G+ A
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ G PN + T LI + G +A M + G+ P + ++ GL
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627
Query: 196 KNCGK 200
GK
Sbjct: 628 SKNGK 632
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 9 PVRG--RDLLVQGLLNAGYLESAK-----QMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
P +G R+ + + AGY +SA Q+ + M G PD + +LI+ CK+G
Sbjct: 714 PEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNT 773
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E + ++ + + G A + LI K G + EA++L+ ++V++ P Y +
Sbjct: 774 EKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTIL 832
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I+ G +A F E++ + PN YT+L+ R GR E + EM G+
Sbjct: 833 IEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGI 892
Query: 182 TPISRCFDLVTDG 194
P + ++ D
Sbjct: 893 KPDDLAWSVMVDA 905
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 3/148 (2%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
NSL + + K VE ++Y + LG+ DV TY LI A + G ++E +L ++
Sbjct: 202 NSLSKDLLKGNRVELFWKVYKGM--LGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDME 259
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
E G P Y+ +I G R G D+A + KG P+ +Y TLI R R
Sbjct: 260 EKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRST 319
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGL 195
E + L EM MGL P + + +G
Sbjct: 320 EGKSMLDEMYTMGLKPDHVAYTALINGF 347
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G +E K ++ M ++G P+L T++ +I +C++G+V+ +E+
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G D Y LI + E +L + G P Y +I G +
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ AF E+ + N Y LI + G +A + EMT MG+ P +
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409
Query: 188 FDLVTDG 194
++ + +G
Sbjct: 410 YNCLIEG 416
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + +++ GL AG ++ A ++ M +G PD + +LI+ C+
Sbjct: 258 MEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKR 317
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
M + +G D Y LI K I AF++ + Y
Sbjct: 318 STEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYA 377
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A FSE+ + G P+ Y LI + +A L+E+ +
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKEN 437
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
LT + + +GL +CG A ++ Q +S
Sbjct: 438 LTANAYMCGAIVNGLCHCGDLTRANELFQEMIS 470
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 4/202 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G L A Q+V M+ P+ T+ LIE C G ++ +++ + K
Sbjct: 797 LIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRN 856
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY L+ ++ G E F L +V G P ++ ++ + G + A
Sbjct: 857 VMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKAL 916
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT-PISRCFDLVTDG 194
++ +G + +YT LI + E L E+ + G ++ C LV
Sbjct: 917 KLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVC-C 975
Query: 195 LKNCGKHDLAEKIEQLEVSLRS 216
G+ D E + LE +RS
Sbjct: 976 FHRAGRTD--EALRVLESMVRS 995
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 8/211 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P L+ G K M+++M G PD + +LI K +
Sbjct: 293 MANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSD 352
Query: 61 V--EFCV--EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ F V EM+ KL + TY LI + K G +++A L + G P
Sbjct: 353 IGGAFQVKEEMFARKIKL----NTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +I+G ++ + A+ EIK + N + ++ G A EM
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEM 468
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GL P + + GL G+ + A KI
Sbjct: 469 ISWGLKPNIVIYTTIVKGLVKEGRFEEAIKI 499
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 74/177 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P +L++ G ++ A+Q+ +M K+ P++ T+ SL+ + G
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGR 876
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G D + +++ A K G +A +L+ +++ +G N +LY
Sbjct: 877 RSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTI 936
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+I + + E++ +G + TL+ R GR EA L M
Sbjct: 937 LIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 6/220 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ P V ++ GL AG L+ A+++ ++M K+G P + T+N+LI+ ICK G VE
Sbjct: 272 DENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVE 331
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V ++ + + +V TY +LI + G ID A +L+ + +G P Y +I
Sbjct: 332 DAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLI 391
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHP--PNRPVYTTLIT---MCGRGGRFVEAANYLMEMT 177
+ +F G+ D A F + KG PN+ Y +I+ + R AA +MEM
Sbjct: 392 RYSFEEGEMDKALHLFERMS-KGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMV 450
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
E G P + V +GL G L+ + +++ R +
Sbjct: 451 ERGYLPRRFMLNRVLNGLMLTGNQQLSRDLLRMQEKYRRL 490
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 6/197 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L + + A +V + +++ PD+ T+N+L + C+ + +++ + + G
Sbjct: 176 LLDALGKSRHASKAASLV-RALERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESG 234
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-----NPFPSLYAPIIKGAFRRGQ 130
+TY +++ +AG + A+ + + G P Y II G GQ
Sbjct: 235 IAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQ 294
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
D A F E+ +G PP Y LI + + G +A +M P + +
Sbjct: 295 LDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTV 354
Query: 191 VTDGLKNCGKHDLAEKI 207
+ GL + GK D A K+
Sbjct: 355 LIRGLCHVGKIDRAMKL 371
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
DL FNSL++ + KS + ++ + DV TY L + A LL
Sbjct: 169 DLPLFNSLLDALGKSRHASKAASLVRALERRFP-PDVVTYNTLADGWCRVKDTSRALDLL 227
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-----PPNRPVYTTLIT 158
+ E G P + Y I+KG FR GQ A+ FF ++K +G P+ YTT+I
Sbjct: 228 RQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIH 287
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A EM++ G P
Sbjct: 288 GLGVAGQLDKARKLFDEMSKEGCPP 312
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ +P +L+ GL AG L A+ + K++ G P + SLI +C +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + G TY ++I A K GM++EA L+ ++EDGH P Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + ++A F+E++ G PNR + T+I + + +A EM
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P S + ++ DGL GK + A K+ Q
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQ 209
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ L+ GL AG ++ A+++++ M+ G PD+ T+N+L+ C++G+
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + G +V TY L+ + KA + EA + + G P Y
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G GQ D F E+ G P+ VY TL + GR A L E E
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 495
Query: 181 LTPI--SRCFDLVTDGLKNCGKHDLA 204
+ + DGL GK ++A
Sbjct: 496 RSEAWGDEVYRFAVDGLLEAGKMEMA 521
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P +L+ GL AG L A ++ +M+ G P T+N +I +C +
Sbjct: 176 MEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ S+ G T+ ILI A K G +DEAFRLL + +DGH P Y+
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + DDA ++ + P TLI + GR EA L M G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P ++ + G G+ + A ++
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERAREL 382
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L+ GL A + A+++ M ++G P T+N +I+ CK G +E
Sbjct: 40 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 99
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G DV TY ++ + K+ ++EA L + + G P + II G
Sbjct: 100 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 159
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++ + D A F E++ K PP+ Y LI + G+ EA M + G+TP
Sbjct: 160 LCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPS 219
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ +++V G+ C + L E +E + S+RS
Sbjct: 220 AVTYNVVIHGM--CLAYTLDEALELFK-SMRS 248
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D G P V L+ GL + ++ A+ ++ M+K+ P + T N+LI +CK+G
Sbjct: 281 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ ++ G DV TY L+ +AG + A LL ++V G P Y
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + +A F+++K G PN YT LI G+ EM G
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLEVSLRS 216
++P + + L G+ A E + + SLRS
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P ++++ G LE A ++ KMI+ G PD+ T+N++++ +CKS
Sbjct: 71 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 130
Query: 61 VEFCVEMYYSVCKLG-----------------------SCA------------DVSTYKI 85
VE + ++ + +LG +C D +Y I
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGI 190
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI ++KAG ++EA++L +++ G P Y +I G D+A F ++ KG
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+R + LI + G+ EA L MT+ G P + + GL + + D A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 206 KI 207
+
Sbjct: 311 HL 312
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G L+ A +++ +M G PD+ T+++LI +C
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + K V T LI + KAG I EA +L +V G +P Y
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R GQ + A S++ +G PN YT L++ + R EA +M G
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 181 LTP 183
P
Sbjct: 426 CAP 428
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++++ G+ A L+ A ++ M +G P TFN LI+ CK G+
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G DV TY LI + +D+A LL ++V+ P
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A + G P+ Y TL+ R G+ A L +M G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 181 LTPISRCFDLVTDGL 195
L P + + GL
Sbjct: 391 LAPNVVTYTALVSGL 405
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + ++ GL ++ A Q+ ++M + PD ++ LI+ + K+G+
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGK 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G TY ++I + A +DEA L ++ G P +
Sbjct: 201 LNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG+ D+AF + GH P+ Y+TLI+ R +A + L +M +
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P + + GL G+ A ++ VS
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G +AG ++ ++ +M+ G PD + +L +CKSG
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480
Query: 61 VEFCVEMYYS---VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+E+ + + D Y+ + + +AG ++ A + ++V G P P
Sbjct: 481 SARALEILREGRESLRSEAWGD-EVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPER 539
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEI 141
A ++ G + GQ +A EI
Sbjct: 540 CASLVAGLCKSGQGGEARAVLEEI 563
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P ++ +LL+ G L +E A + +M G PD T+NSLI+ KSG++
Sbjct: 785 GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINEL 844
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + G + TY ++I + K+ +D+A L +NLV +P P + P+I G
Sbjct: 845 FDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDG 904
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ DDA F + G PN +Y L+ G+ G A + M + G+ P
Sbjct: 905 LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964
Query: 185 SRCFDLVTDGLKNCGKHDLA----EKIEQ 209
+ + ++ D L G+ D A EK++Q
Sbjct: 965 LKSYTILVDILCIAGRVDDALHYFEKLKQ 993
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF + L+ LL +G+ + A ++ +M+ +G P L+TF++L+ K
Sbjct: 185 MREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRN 244
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + +G ++ TY I I + + G IDEA+R++ + +DG P Y
Sbjct: 245 IKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTV 304
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + DDA C F+++K H P++ Y TL+ G + EM G
Sbjct: 305 LIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADG 364
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P F ++ + L G+
Sbjct: 365 YAPDVVTFTILVNALCKAGR 384
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL +G L+ A +M + M+ G P+ +N L+ K G V+ E + + K G
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ +Y IL+ + AG +D+A L + G +P Y +I G R + ++A
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E++ +G P+ Y +LI G G EA E+ +GL P ++ + G
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080
Query: 196 KNCGKHDLAEKI 207
G +LA I
Sbjct: 1081 TLSGNSELAYGI 1092
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +L+ L A L+ A + KM PD T+ +L++ G
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGH 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G DV T+ IL+ A+ KAG I+EAF LL + + G P Y
Sbjct: 350 LDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNT 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + DDA FS ++ G P Y LI G+ G +A +M G
Sbjct: 410 LISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG 469
Query: 181 LTP 183
+ P
Sbjct: 470 IAP 472
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ +G + + ++M+ +G P+ T+N +I + KS
Sbjct: 816 MKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNR 875
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++YY++ T+ LI + K+G +D+A + +V G P ++Y
Sbjct: 876 LDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNI 935
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G D A FF + +G P+ YT L+ + GR +A +Y ++ + G
Sbjct: 936 LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995
Query: 181 LTPISRCFDLVTDGL 195
L P ++L+ +GL
Sbjct: 996 LDPDLVAYNLMINGL 1010
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++++ L+ + L+ A + ++ P TF LI+ + KSG
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ EM+ + G + + Y IL+ K G +D A +V++G P Y
Sbjct: 911 LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ DDA +F ++K G P+ Y +I GR R EA + EM G
Sbjct: 971 LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLE 211
+ P ++ + L G + A KI E+L+
Sbjct: 1031 IVPDLYTYNSLILNLGIVGMIEEAGKIYEELQ 1062
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ + G+L+ +++ +M G PD+ TF L+ +CK+G + ++ ++ K G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY LI + +A +D+A L N+ G P Y +I + G A
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K +G PN + GR EA E+ GL P S ++++
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519
Query: 196 KNCGKHDLAEKI 207
G+ D A K+
Sbjct: 520 SKVGQVDEAIKL 531
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 89/193 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + ++ L G ++ A +++ +M G PD+ T+ LI+ +C + +
Sbjct: 255 MESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARK 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + D TY L+ S G +D+ ++ + DG+ P +
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ ++AF ++ +G PN Y TLI+ R R +A + M +G
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434
Query: 181 LTPISRCFDLVTD 193
+ P + + L+ D
Sbjct: 435 VEPTAYTYILLID 447
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 36/231 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++L+ GL G ++ A Q+ M G P+ TFN+L++ +CK+ E
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDE 629
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILI--------------------------------- 87
V+ ++M+Y + + DV T+ +I
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTL 689
Query: 88 -PAVSKAGMIDEAFRLLHNLV-EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
P V K+G I++AFR+ + + G N S + ++ G + A F + +
Sbjct: 690 LPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRA 749
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EMGLTPISRCFDLVTDGL 195
+ V +I + + + A N ++ T E+G+ P + ++L+ DG
Sbjct: 750 ICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGF 800
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + + L G L AK M N++ G PD T+N +++ K G+
Sbjct: 465 MKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQ 524
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + K+ DV LI + KAG ++EA+++ + E P Y
Sbjct: 525 VDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNI 584
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + GQ A F + G PN + TL+ + A +MT M
Sbjct: 585 LLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMN 644
Query: 181 LTPISRCFDLVTDGL 195
P F+ + G
Sbjct: 645 CRPDVLTFNTIIHGF 659
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GLL A L+ A + + M G +P T+ LI+ KSG
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGH 454
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G ++ + ++++ G + EA + + L G P Y
Sbjct: 455 PGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNM 514
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K + GQ D+A SE+ P+ V +LI + GR EA M EM
Sbjct: 515 MMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMN 574
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L P ++++ GL GK +K QL
Sbjct: 575 LAPTVVTYNILLAGL---GKEGQIQKAVQL 601
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ +LV L AG ++ A K+ + G DPDL +N +I + +S
Sbjct: 956 MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQR 1015
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +++ + G D+ TY LI + GMI+EA ++ L G P Y
Sbjct: 1016 TEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNA 1075
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G G + A+ + ++ + G PN + L
Sbjct: 1076 LIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++LV G G++++A + +M+K+G PDL+++ L++ +C +G
Sbjct: 921 MVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGR 980
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + + G D+ Y ++I + ++ +EA L H + G P Y
Sbjct: 981 VDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNS 1040
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G ++A + E++ G PN Y LI
Sbjct: 1041 LILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 4/159 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS P V + L+ L AG +E A QM +M + P + T+N L+ + K G+
Sbjct: 535 MSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQ 594
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V+++ S+ G + T+ L+ + K +D A ++ + + P +
Sbjct: 595 IQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNT 654
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
II G ++ Q +A F ++K RP + TL T+
Sbjct: 655 IIHGFIKQNQIKNAIWLFHQMK----KLLRPDHVTLCTL 689
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + +Y LI + ++G EA + +V +G P ++ ++ + +R
Sbjct: 189 GFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTV 248
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E++ G PN YT I + GR G+ EA + M + G P + ++ D
Sbjct: 249 MGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDA 308
Query: 195 LKNCGKHDLA 204
L K D A
Sbjct: 309 LCTARKLDDA 318
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 2/184 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL + +E A Q++++MI +G PD T+NSL+ C+ G+++ ++ ++
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY LI + KAG ++ A +LL ++ G N P Y P+I+G FR+ + +
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 134 AFCFFSEIKIKGH-PPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A F E+ + PP+ Y + +C GG EA ++L+E+ E G P ++
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Query: 192 TDGL 195
+GL
Sbjct: 689 AEGL 692
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 1 MSDK-GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
MS++ GF P + LV GL AG+++ A ++++ M+++G DPD+ T+NS+I +CK G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
EV+ VE+ + + TY LI + K ++EA L L G P +
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+G A F E++ KG P+ Y LI G+ EA N L +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEV 212
G ++ + DG K AE+I +++EV
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P V + L+QGL A ++ +M +G +PD T+N LI+++C G+
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + M + G V TY LI KA EA + + G + Y
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA ++ ++G P++ Y +L+T RGG +AA+ + MT G
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + GL G+ ++A K+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G++P V + ++ GL G ++ A +++++MI + P+ T+N+LI T+CK +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + G DV T+ LI + A L + G P Y
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +G+ D+A ++++ G + Y TLI + + EA EM G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++ S ++ + DGL K+ D A+ ++Q+
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+++V G G +E A + +M Q G PD TFN+L+ +CK+G V+ +E+ +
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G DV TY +I + K G + EA +L ++ +P Y +I + Q +
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLIT-MC-GRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
+A + KG P+ + +LI +C R R A EM G P +++
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNM 440
Query: 191 VTDGLKNCGKHDLA-EKIEQLEVS 213
+ D L + GK D A ++Q+E+S
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELS 464
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 2/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ L + G L+ A M+ +M G + T+N+LI+ CK+ +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++ + G + TY LI + K+ +++A +L+ ++ +G P Y
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
++ R G A + G P+ Y TLI+ + GR VE A+ L+ +M
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR-VEVASKLLRSIQMK 604
Query: 180 GLTPISRCFDLVTDGL 195
G+ ++ V GL
Sbjct: 605 GINLTPHAYNPVIQGL 620
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++QG + G L+ A ++ +M++ G + N ++ CK G
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE + + G D T+ L+ + KAG + A ++ ++++G++P Y
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ +A ++ + PN Y TLI+ + + EA +T
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
G+ P F+ + GL H +A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVA 419
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 3/208 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + ++ L++ L+ + KM G PD+ TFN LI+ +C++ ++
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ M + G D T+ ++ + G +D A R+ +VE G + I+ G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 125 AFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ +DA F E+ + G P++ + TL+ + G A + M + G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++ V GL C ++ E +E L+
Sbjct: 329 DVYTYNSVISGL--CKLGEVKEAVEVLD 354
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P VR ++L+ G + L AK ++++M + PD T+++L++ C++G
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ +C G D TY IL+ + K G +DEAFRLL + E P +Y
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+ + A FS + +KG P+ YT +I+ + G EA +M G
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521
Query: 181 LTPISRCFDLVTDG-LKNCGKHDLAEKIEQL 210
P S +++ G L+N + IE++
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEM 552
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + ++ L A ++M+ QG P++ T++S++ C G+
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + T+ IL+ + K GMI EA R+ + E+G P Y+
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + Q D+A F + KG P+ VY LI + R EA L EM +
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + + G G+ +A+K+
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKL 408
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++ G N G L A + +MI + P+ TF L++ +CK G
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G D TY L+ +DEA +L +V G P +Y
Sbjct: 297 ILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNI 356
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A SE+ + P+ Y+TL+ + GR A EM G
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG 416
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P S + ++ DGL G D A ++
Sbjct: 417 LLPDSITYSILLDGLCKHGHLDEAFRL 443
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLL--NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M P V +L+ L N ++ A + KM K G P TF +L+ +C
Sbjct: 95 MDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSK 154
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
++ V+++ + K+G + TY +I + K G A +LL + E G P Y
Sbjct: 155 AKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAY 214
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + + ++A FFSE+ +G PPN Y++++ G+ EA + +M
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274
Query: 179 MGLTPISRCFDLVTDGL 195
+ P + F ++ DGL
Sbjct: 275 RNVMPNTVTFTILVDGL 291
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L+ GL + + A ++ +++ K G P L T+ ++I+ +CK G
Sbjct: 136 GLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNA 195
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G DV Y +I ++ K +EA +V+ G P Y+ I+ G
Sbjct: 196 LQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHG 255
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ ++A F ++ + PN +T L+ + G +EA MTE G+ P
Sbjct: 256 FCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPD 315
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ + + DG + D A+K+ + V
Sbjct: 316 AYTYSALMDGYCLQSQMDEAQKLFDIMV 343
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ GL G+L+ A +++ M + +P + +N LI+ +C G+
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ ++ G V TY ++I + K G+ +EA + +V +G P Y
Sbjct: 472 LEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNV 531
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
I+G R G +A E+ +G + + L+ +
Sbjct: 532 AIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 2/202 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG--EVEFCV 65
PPV + L+ L+ + + + +M P++ T LI +C S V F
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ KLG T+ L+ + I +A +L + + G P Y IIKG
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G +A +++ KG P+ Y T+I + R EA + EM + G+ P
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
+ + G N G+ + A +
Sbjct: 247 VTYSSILHGFCNLGQLNEATSL 268
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V +++ GLL G A +M KM+ G P+ T+N I+ ++G+
Sbjct: 485 KGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSN 544
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
V + + G AD ST+++L+ S +I R
Sbjct: 545 AVRLIEEMVGRGFSADSSTFQMLLDLESNDEIISRFMR 582
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+P V ++++ L + G LE A +++++++K G P + T+ LIE G
Sbjct: 157 MRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGR 216
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + G D+ TY +I + K GM D A + +L G NP Y
Sbjct: 217 INEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNI 276
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ + +++D ++ + G PN ++ LI+ R GR EA N L M E G
Sbjct: 277 LLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKG 336
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
LTP S +D + G+ DLA IE LE
Sbjct: 337 LTPDSYSYDPLISAFCKEGRLDLA--IEYLE 365
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G NP V ++L++ LN E ++++ M+ G +P++ T + LI + C+ G
Sbjct: 262 LSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGR 321
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V V + + + G D +Y LI A K G +D A L +V DG P Y
Sbjct: 322 VREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNT 381
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + G D A F ++ G PP Y T+ + G ++A + EM G
Sbjct: 382 ILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKG 441
Query: 181 LTP 183
+ P
Sbjct: 442 IDP 444
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P V L++G N+ L+ A + V ++++ DPD+ ++N++I K+ +++
Sbjct: 91 KGFKPDVVLCTKLIKGFFNSRNLKKAMR-VMEILETYGDPDVYSYNAMISGFSKANQIDS 149
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + G DV TY I+I ++ G ++ AF ++ L++DG P Y +I+
Sbjct: 150 ANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIE 209
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ ++A F E+ +G P+ Y +I + G A +++ ++ G P
Sbjct: 210 ATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNP 269
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++++ N + + E++
Sbjct: 270 DVVSYNILLRSFLNKSRWEDGERL 293
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +L++ + G + A ++ ++++ +G PDL T+N++I ICK G +
Sbjct: 196 GCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRA 255
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G DV +Y IL+ + ++ RL+ ++V G P ++ +I
Sbjct: 256 LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISS 315
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ +A +K KG P+ Y LI+ + GR A YL +M G P
Sbjct: 316 FCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375
Query: 185 SRCFDLVTDGLKNCGKHDLA----EKIEQL 210
++ + L G DLA EK++++
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEV 405
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 2/206 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +L+ G + A ++ M ++G PD +++ LI CK G ++
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA 360
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E + G D+ Y ++ + K G D A + L E G P Y +
Sbjct: 361 IEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSA 420
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A SE+ KG P+ Y +LI+ R G EA L++M P
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPT 480
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
F++V G+ C H + E IE L
Sbjct: 481 VISFNIVLLGM--CKAHRVFEGIELL 504
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P D L+ G L+ A + + KM+ G PD+ +N+++ T+CK G
Sbjct: 332 MKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGC 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + ++G V Y + A+ G +A ++ ++ G +P Y
Sbjct: 392 ADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNS 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT-TLITMCGRGGRFVEAANYLMEMTEM 179
+I R G D+A +++ P + L+ MC + R E L+ M E
Sbjct: 452 LISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMC-KAHRVFEGIELLITMVEK 510
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
G P + L+ +G+ G AE +E
Sbjct: 511 GCLPNETSYVLLIEGIAYAGWR--AEAME 537
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + +++G+ G + A V + +G +PD+ ++N L+ + E
Sbjct: 230 RGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWED 289
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G +V T+ ILI + + G + EA +L + E G P Y P+I
Sbjct: 290 GERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLIS 349
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ D A + ++ G P+ Y T++ + G A + ++ E+G P
Sbjct: 350 AFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPP 409
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
R ++ + L +CG KI+ LE+
Sbjct: 410 TVRAYNTMFSALWSCGN-----KIKALEM 433
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 35/145 (24%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
+ + G P VR + + L + G A +M+++MI++G DPD T+NSLI
Sbjct: 402 LDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGL 461
Query: 53 ---------------------------ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+CK+ V +E+ ++ + G + ++Y +
Sbjct: 462 VDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVL 521
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDG 110
LI ++ AG EA L ++L G
Sbjct: 522 LIEGIAYAGWRAEAMELANSLYRLG 546
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + + L+ GL + ++ A Q++++MI +G PD T+NS++ C+ G+
Sbjct: 375 MEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGD 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G D+ TY LI + KAG ++ A RLL ++ G P Y P
Sbjct: 435 IQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNP 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I+ F+R + +A F E++ KG+ P+ Y + + GG EA ++++EM E
Sbjct: 495 VIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEK 554
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
G P F ++ +GL + D K+ L
Sbjct: 555 GFLPEFSSFYMLAEGLCSLSMEDTLIKLVDL 585
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
N G A ++ N+M +G PD T+N LI+++C G+++ + + + G +V
Sbjct: 291 NEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVI 350
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY LI K I+EA + + G + Y +I G + + +A ++
Sbjct: 351 TYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQM 410
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
++G P++ Y +++T R G +AA+ + MT G P + + GL G+
Sbjct: 411 IMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRV 470
Query: 202 DLAEKI 207
++A ++
Sbjct: 471 EVASRL 476
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ L++ L+ + + + M+ +G PD+ TFN LI+ +CK+ ++ + + +
Sbjct: 162 NFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSS 221
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D T+ L+ + G +D AFR+ +++ G ++ G + G+ ++
Sbjct: 222 YGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEE 281
Query: 134 AFCF----------------FSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEM 176
A F ++E+K KG P+ Y LI ++C R G+ EA L EM
Sbjct: 282 ALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYR-GKLQEALGLLREM 340
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
G ++ + DG K + AE+I +Q+E+
Sbjct: 341 EISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQ 378
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P ++L+ L G L+ A ++ +M G ++ T+N+LI+ CK+ +
Sbjct: 305 MKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKK 364
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + TY LI + K+ + EA +L+ ++ +G P Y
Sbjct: 365 IEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNS 424
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM---EMT 177
++ R G A + G P+ Y TLI + GR VE A+ L+ ++
Sbjct: 425 MLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGR-VEVASRLLRSIQLK 483
Query: 178 EMGLTP 183
M LTP
Sbjct: 484 GMVLTP 489
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 16/199 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P + L+QG + G ++ A ++ +M+ G T N L+ CK G
Sbjct: 219 MSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGR 278
Query: 61 VE----------------FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+E +E+Y + G D TY +LI ++ G + EA LL
Sbjct: 279 IEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLR 338
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ G Y +I G + + ++A F +++I+G N Y TLI +
Sbjct: 339 EMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSR 398
Query: 165 RFVEAANYLMEMTEMGLTP 183
R EAA + +M GL P
Sbjct: 399 RVQEAAQLMDQMIMEGLKP 417
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
D +N L+ + +++ ++ ++ G DVST+ ILI A+ KA I A ++
Sbjct: 157 DTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVM 216
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ G P + +++G G D AF ++ G P L+ +
Sbjct: 217 EEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKE 276
Query: 164 GRFVEAANYLMEMTEMG 180
GR EA +++ EM+ G
Sbjct: 277 GRIEEALSFIDEMSNEG 293
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 99/192 (51%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL +G + A ++ N+MIK+G +PD T+ +LI+ CK GE++ ++ + ++G
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY L + K+G +D A LLH + G S Y I+ G + G A
Sbjct: 316 LTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAV 375
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+K G P+ YTTL+ + G V+A L EM + GL P F+++ +GL
Sbjct: 376 KLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGL 435
Query: 196 KNCGKHDLAEKI 207
GK + E++
Sbjct: 436 CMSGKLEDGERL 447
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++L+ GL +G LE ++++ M+++G P+ T+NS+++ C
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y +C G D +TY ILI KA + EA+ L +VE N S Y
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+IKG F+R + +A F E++ +G + +Y + M
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDM 574
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 92/189 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P L+ G G ++ A + N+M++ G P++ T+ +L + +CKSGE
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + +C+ G ++STY ++ + KAG I +A +L+ + E G +P Y
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ G+ A E+ +G P + L+ G+ + L M E G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455
Query: 181 LTPISRCFD 189
+ P + ++
Sbjct: 456 IMPNAATYN 464
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++ G + G L+ Q+V +M +G P+L T++S+I +CKSG+
Sbjct: 136 MEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK 195
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + K G D Y LI K G A++L + P ++
Sbjct: 196 VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSA 255
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +A F+E+ KG P+ YT LI + G +A +M ++G
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + DGL G+ D A ++
Sbjct: 316 LTPNVVTYTALADGLCKSGELDTANEL 342
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC-KSGEV 61
D G +P V D+ Q L+ AG L A++ +K++ G + N + + K +
Sbjct: 34 DWGSDPHVF--DVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDML 91
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++++ +LG C + +Y IL+ ++ + G I EA LL + G P Y I
Sbjct: 92 GMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTI 151
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G G+ E+++KG PN Y+++I + + G+ VE L EM + G+
Sbjct: 152 IDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGV 211
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + DG G A K+
Sbjct: 212 FPDHVIYTTLIDGFCKLGNTQAAYKL 237
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L GL +G L++A +++++M ++G ++ T+N+++ +CK+G
Sbjct: 311 MVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGN 370
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V++ + + G D TY L+ A K G + +A LL +++ G P +
Sbjct: 371 ILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNV 430
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G+ +D + KG PN Y +++ C R + Y M
Sbjct: 431 LMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY-RGMCAQ 489
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P S ++++ G +C ++ E
Sbjct: 490 GVVPDSNTYNILIKG--HCKARNMKE 513
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ L G + A ++ +M +G PD+ ++ ++I+ C GE++ V++ +
Sbjct: 114 NILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQL 173
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ TY +I + K+G + E ++L +++ G P +Y +I G + G
Sbjct: 174 KGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQA 233
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ FSE++ + P+ ++ LI G+ VEA EM + G P + + D
Sbjct: 234 AYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALID 293
Query: 194 G 194
G
Sbjct: 294 G 294
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ L +G + ++++ +M+K+G PD + +LI+ CK G
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + D + LI +S +G + EA +L + +++ G P Y
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ AF +++ G PN YT L + G A L EM G
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L ++ + +GL C ++ + ++ +E
Sbjct: 351 LQLNISTYNTIVNGL--CKAGNILQAVKLME 379
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G ++A ++ ++M + PD F++LI + SG+
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGK 265
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + K G D TY LI K G + +AF L + +V+ G P Y
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + G+ D A E+ KG N Y T++ + G ++A + EM E G
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + + D G+
Sbjct: 386 LHPDTITYTTLMDAYYKTGE 405
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + + +V GL AG + A +++ +M + G PD T+ +L++ K+GE
Sbjct: 346 MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGE 405
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G V T+ +L+ + +G +++ RLL ++E G P + Y
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNS 465
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+K R + + + +G P+ Y LI + EA EM E
Sbjct: 466 IMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKR 525
Query: 181 LTPISRCFDLVTDGL 195
+ ++ + G
Sbjct: 526 FNLTASSYNALIKGF 540
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF + + + GL E AK+ + MI++G P++ ++ +LI+ CK G
Sbjct: 132 MEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGN 191
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + K G + TY +LI SK G + EA+ L + G P Y
Sbjct: 192 FVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTS 251
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ DDA F+E++ KG P N YT +I+ + GR EA EMTE G
Sbjct: 252 LLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAG 311
Query: 181 LTPISRCFDLVTDGL 195
LTP R + + L
Sbjct: 312 LTPDDRVYTSLVSSL 326
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++KG V L+ G+ AG +E+A+ +VN+M +G D + +N+LI+ CK G
Sbjct: 62 LTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGL 121
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G D+ T + + K +EA R L ++E G P Y
Sbjct: 122 IDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTT 181
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G F +A F E+K G PN Y LI + GR EA EM G
Sbjct: 182 LIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKG 241
Query: 181 LTP 183
+ P
Sbjct: 242 IFP 244
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG + +++ G + A + +++ ++G ++ T+ +LI+ +CK+GE
Sbjct: 27 MCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGE 86
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G + Y LI K G+IDEAF++ + + G
Sbjct: 87 MEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNT 146
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + Q ++A + + KG PN YTTLI + + G FVEA EM + G
Sbjct: 147 IADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAG 206
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + ++++ DG G+
Sbjct: 207 GEPNAVTYNVLIDGHSKKGR 226
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T+ LI+ SG+++ M+ +C+ G AD+ Y ++I K G AF L L
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
E G Y +I G + G+ + A +E++ +G N+ +Y TLI + G
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
EA + M + G + + DGL+ + + A++
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKR 162
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 53/129 (41%)
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V+TY +LI +G IDE R+ + E G +Y +I + G AF F
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
E+ KG N Y LI + G A + EM GL ++ + DG G
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 200 KHDLAEKIE 208
D A K++
Sbjct: 121 LIDEAFKVQ 129
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF+P + ++L+ L + G L+SA + N+++K+ P + T+ LIE G
Sbjct: 152 MKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGG 211
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + ++ D+ TY +I + + G +D AF+++ ++ G+ P Y
Sbjct: 212 IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNI 271
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G +G+++ + S++ +G N Y+ LI+ R G+ E L +M + G
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
L P C+D + L G+ DLA IE L+V
Sbjct: 332 LKPDGYCYDPLIAALCKEGRVDLA--IEVLDV 361
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG+ P V ++L++GLLN G E+ ++++ M+ +G + ++ T++ LI ++C+ G+
Sbjct: 257 ISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGK 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE V + + K G D Y LI A+ K G +D A +L ++ DG P Y
Sbjct: 317 VEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNT 376
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + D+A F ++ G PN Y ++ + G V A ++EM + G
Sbjct: 377 ILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKG 436
Query: 181 LTP 183
+ P
Sbjct: 437 VDP 439
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 96/199 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + +++G+ GY++ A Q+++ + +G PD+ T+N L+ + G+
Sbjct: 222 MLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGK 281
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + G A+V TY +LI +V + G ++E LL ++ + G P Y P
Sbjct: 282 WEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDP 341
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D A + G P+ Y T++ + R EA + ++ E+G
Sbjct: 342 LIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401
Query: 181 LTPISRCFDLVTDGLKNCG 199
+P + ++ + L + G
Sbjct: 402 CSPNASSYNSMFSALWSTG 420
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ L G ++ A +++++M++ PD+ T+NS+I +C+ G V+ ++
Sbjct: 194 PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQI 253
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G DV TY IL+ + G + + L+ ++V G Y+ +I R
Sbjct: 254 ISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCR 313
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ ++ ++K KG P+ Y LI + GR A L M G P
Sbjct: 314 DGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 37/216 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P D L+ L G ++ A ++++ MI G PD+ +N+++ +CK
Sbjct: 327 MKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKR 386
Query: 61 VEFCVEMYYSVCKLGSCADVS-----------------------------------TYKI 85
+ + ++ + ++G + S TY
Sbjct: 387 ADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNS 446
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI + + GM+DEA LL ++ + PS+ Y ++ G + + DA + +
Sbjct: 447 LISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVD 506
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
KG PN YT LI G GG +A + + M
Sbjct: 507 KGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM 542
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 1/185 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG + + ++ +G PD+ LI + S ++ +++ + + G D+
Sbjct: 70 AGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDLIA 128
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y +I +A ID A+++L + G +P Y +I RG D A F +++
Sbjct: 129 YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+ P YT LI G EA L EM E+ L P ++ + G+ G D
Sbjct: 189 KENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVD 248
Query: 203 LAEKI 207
A +I
Sbjct: 249 RAFQI 253
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 12/193 (6%)
Query: 33 VNKMIKQGSDPDLETFN----SLIETI---CKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+N+ + S P T + L++++ CK+G + + G DV
Sbjct: 38 INRTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTK 97
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + + ID+A +++H L GH P Y II G R + D A+ +K KG
Sbjct: 98 LIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG 156
Query: 146 HPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P+ Y LI ++C R G A + ++ + P + ++ + G D A
Sbjct: 157 FSPDIVTYNILIGSLCSR-GMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEA 215
Query: 205 EKI--EQLEVSLR 215
K+ E LE++L+
Sbjct: 216 MKLLDEMLEINLQ 228
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + L+ GL N G + A+ + +MIK G PD+ T+N+L+ CK GE
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ K G DV TY LI KA +DEA R+L +V + P Y
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV-EAANYLMEMTEM 179
++ G + G+ D+A + KG PN Y+TLI+ R R V EA + +
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 180 GLTPISRCFDLVTDGL 195
G P ++++ DGL
Sbjct: 178 GYEPEVPTYNILIDGL 193
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNA--GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
DKGF+P V L+ GL G E+ K + ++KQG +P++ T+N LI+ + K
Sbjct: 140 DKGFSPNVITYSTLISGLCRELRGVSEALK-LFGSVLKQGYEPEVPTYNILIDGLLKEDR 198
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + K G D TY + I + KAG +++A +L ++ E G P +
Sbjct: 199 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 258
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A S ++ KG PN + TLI R G++ +A EM + G
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318
Query: 181 LTPISRCFDLVTDGL 195
+ P ++++ DGL
Sbjct: 319 VKPTVVTYNILVDGL 333
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 4/203 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P V + L+ G A L+ A++++ +M+ + PD+ T+NSL+ +CK+G V+
Sbjct: 74 RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD- 132
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGM-IDEAFRLLHNLVEDGHNPFPSLYAPII 122
E + G +V TY LI + + + EA +L ++++ G+ P Y +I
Sbjct: 133 --EARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILI 190
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + ++AF FS + G P+ YT I + GR +A L +M E G
Sbjct: 191 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 250
Query: 183 PISRCFDLVTDGLKNCGKHDLAE 205
P + V +GL + D AE
Sbjct: 251 PDVVSHNAVINGLCKEKRVDEAE 273
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + ++ GL ++ A+ +++ M +G P+ +FN+LI C++G+
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA---GMIDEAFRLLHNLVEDGHNPFPSL 117
+ + + + K G V TY IL+ + KA G I EA L ++E G P
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEM 176
Y+ +I G + G+ DDA ++ KG PN Y +LI+ +CG + EA + M
Sbjct: 364 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGL-EKVDEALELFVAM 422
Query: 177 TEMGLTP 183
E G P
Sbjct: 423 VEKGCVP 429
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-- 58
M KG +P + L+ G AG + A +M+K+G P + T+N L++ +CK+
Sbjct: 279 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 338
Query: 59 -GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G ++ + ++ ++ + G DV TY LI + KAG +D+A RLL + G P
Sbjct: 339 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 398
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
Y +I G + D+A F + KG P+ Y T+I+
Sbjct: 399 YNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 5/207 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + GL AG +E A M+ M ++G PD+ + N++I +CK V+
Sbjct: 213 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 272
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G + ++ LI +AG +A +++ G P Y ++ G
Sbjct: 273 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 332
Query: 125 ---AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
A + G+ +A F + KG P+ Y+ LI G+ G+ +A L M G
Sbjct: 333 LCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGC 392
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKIE 208
P ++ + GL CG + E +E
Sbjct: 393 IPNVYTYNSLISGL--CGLEKVDEALE 417
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V L+ GL AG L+ A++++ M +G P++ T+NSLI +C +
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEK 411
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPA 89
V+ +E++ ++ + G D TY +I A
Sbjct: 412 VDEALELFVAMVEKGCVPDTITYGTIISA 440
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY L+ + G + +A L +++ G++P Y ++ G + G+ D+A F
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y LI + + EA L M L P ++ + +GL G+
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131
Query: 202 DLA 204
D A
Sbjct: 132 DEA 134
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + L+ GL N G + A+ + +MIK G PD+ T+N+L+ CK G+
Sbjct: 76 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGK 135
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ K G DV TY LI KA +DEA R+L +V + P Y
Sbjct: 136 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEM 179
++ G + G+ D+A + KG PN Y+TLI+ R R +E+A L+E M
Sbjct: 196 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252
Query: 180 GLTPISRCFDLVTDGL 195
G P ++ + GL
Sbjct: 253 GCKPDIVSYNALIHGL 268
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 3 DKGFNPPVRGRDLLVQGLLNA-GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
DKGF+P V L+ GL LESA+Q++ KM+ G PD+ ++N+LI + + V
Sbjct: 215 DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGV 274
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++++ SV + G +V TY ILI + K ++EAF L LV+ G P Y
Sbjct: 275 SEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVF 334
Query: 122 IKGAFRRGQFDDAF-----------------------------------CFFSEIKIKGH 146
I G + G+ +DA S ++ KG
Sbjct: 335 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 394
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
PN + TLI R G++ +A EM + G+ P ++++ DGL
Sbjct: 395 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 443
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 3/207 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P V ++L+ GLL + A ++ + ++K G +PD T+ I+ +CK+G VE
Sbjct: 287 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 346
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ M + + G DV ++ +I + K +DEA LL + G +P + +I
Sbjct: 347 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 406
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCG--RGGRFVEAANYLMEMTEMG 180
G R G++ A F E+ +G P Y L+ +C + GR EA M E G
Sbjct: 407 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 466
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + DGL GK D A ++
Sbjct: 467 RVPDVVTYSALIDGLGKAGKLDDARRL 493
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + ++ GL ++ A+ +++ M +G P+ +FN+LI C++G+
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA---GMIDEAFRLLHNLVEDGHNPFPSL 117
+ + + + K G V TY IL+ + KA G I EA L ++E G P
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEM 176
Y+ +I G + G+ DDA ++ KG PN Y +LI+ +CG + EA + M
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGL-DKVDEALELFVAM 532
Query: 177 TEMGLTPISRCFDLVTDGL 195
E G P + + + L
Sbjct: 533 VEKGCVPDTITYGTIISAL 551
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 7/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-- 58
M KG +P + L+ G AG + A +M+K+G P + T+N L++ +CK+
Sbjct: 389 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 448
Query: 59 -GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G ++ + ++ ++ + G DV TY LI + KAG +D+A RLL + G P
Sbjct: 449 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 508
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEM 176
Y +I G + D+A F + KG P+ Y T+I+ +C + V+ A L +
Sbjct: 509 YNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQ--EMVDKALALFDG 566
Query: 177 T-EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ E G+ P S + + DGL + D A K+ Q
Sbjct: 567 SLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 33/235 (14%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE- 62
+GF P V + L+ G A L+ A++++ +M+ + PD+ T+NSL+ +CK+G V+
Sbjct: 149 RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDE 208
Query: 63 ---FCVE-------MYYSVCKLGSCA----------------------DVSTYKILIPAV 90
V+ + YS G C D+ +Y LI +
Sbjct: 209 ARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGL 268
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
++ + EA +L +++ G+ P Y +I G + + ++AF FS + G P+
Sbjct: 269 AREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA 328
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
YT I + GR +A L +M E G P + V +GL + D AE
Sbjct: 329 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 383
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
++P +L++ LL +G +E A + V +++ +G D+ TFN I +C++ +
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQ 70
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + K G + TY L+ + G + +A L +++ G++P Y ++ G
Sbjct: 71 TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G+ D+A F +G P+ Y LI + + EA L M L P
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + +GL G+ D A
Sbjct: 191 VTYNSLVNGLCKNGRVDEAR 210
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 3/182 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ + GL A + A+ + + M K G P+ T+N+L+ +C G + +Y + K
Sbjct: 54 NIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIK 113
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY L+ K G +DEA ++ V+ G P Y +I G + + D+
Sbjct: 114 AGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDE 173
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + + P+ Y +L+ + GR EA M + + G +P + +
Sbjct: 174 AQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLIS 230
Query: 194 GL 195
GL
Sbjct: 231 GL 232
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 37/245 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+GF+P +L+ GL G + A+Q++ M +G +PD+ T+N+L+ +C G+
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP----- 115
+E +++ S+ G +V +Y ILI K IDEAFRL + G P
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 116 ------------------------------SLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
S Y ++ G + G ++A F IK
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
H PN V++ L+ R G+ EA E+++ GL P + ++++ +GL C K L+E
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL--CNKGMLSE 479
Query: 206 KIEQL 210
++ L
Sbjct: 480 AVKLL 484
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D+G V ++L+ G ++ A ++ +M +G P T+N+LI +C+SG
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + G +STY +L+ + K G ++EA L ++ + H P +++
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ ++A+ F EI G P+ Y LI G EA L +M E G
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P S F+++ L ++++ E I+ LE
Sbjct: 492 CLPDSITFNVIIQNL--LKENEIHEAIQLLE 520
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P LV+G+ + A Q+ ++M ++G D +T+ LI +CK+ +
Sbjct: 71 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130
Query: 64 CVEMYYSVCKLGSC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++++ + G+C DV TY ++I ++ K GM EA + ++ G P +Y+ ++
Sbjct: 131 AIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R G+ +A FF E++ +G + Y +LI R G + E +L M + G +
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + F ++ DGL GK A++I +L
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILEL 276
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + V + L+ GL AG + +N M+ +G PD TF LI+ +CK G+
Sbjct: 207 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 266
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G D+ TY L+ + G +++A +L +L + G Y
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+AF F E++ KG P+ Y TLI + GR A +EM G
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ DGL C L E I+
Sbjct: 387 QFLKLSTYCVLLDGL--CKNGHLEEAID 412
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ L +G + +A+++ +M G L T+ L++ +CK+G
Sbjct: 347 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ S+ K ++ + IL+ + +AG ++EA++ + ++G P Y
Sbjct: 407 LEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G +A +++ KG P+ + +I + EA L EM
Sbjct: 467 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 526
Query: 181 LTP 183
+P
Sbjct: 527 FSP 529
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL G+LE A + + K P++E F+ L++ +C++G++E + + + K
Sbjct: 396 VLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D Y ILI + GM+ EA +LL + E G P + II+ + + +A
Sbjct: 456 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITM 159
E++ + P+ V + L+ +
Sbjct: 516 IQLLEEMRNRNFSPDEAVTSMLLCL 540
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ L G A M ++MI G PD+ ++SL++ +C+ G ++ +E + +
Sbjct: 151 MIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 210
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G ADV TY LI +S+AG+ E L+ +V+ G +P + +I G + G+ +A
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 270
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ KG P+ Y TL+ G+ +A + + G+ ++++ +G
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 330
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG + +L+ GL A A ++ KM K D+ T+ +I+++CK G
Sbjct: 103 MTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGM 161
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++M+ + G DV Y L+ + + G + EA + G + Y
Sbjct: 162 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 221
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G + + F + + +G P+ +T LI + G+ EA L M G
Sbjct: 222 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + +GL G+ + A K+
Sbjct: 282 KEPDILTYNTLMNGLCLVGQLEDATKL 308
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G P ++L+ GL N G L A +++ +M ++G PD TFN +I+ + K E
Sbjct: 452 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 511
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+ +++ + D + +L+ S A L N ++ G P
Sbjct: 512 IHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGVGSVP 566
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ GL G ++ A M+ MI +G PDL +N LI +CK+ +
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 268
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + G DV TY +I + ++ +DEA RLL + G P LY+
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+AF + + G + Y+TLI + GR EA L M MG
Sbjct: 329 LIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + ++ + GL C + L E IE +E RS
Sbjct: 389 TPPSTMTYNSLIKGL--CDLNHLDEAIELVEEMERS 422
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + + L+ GL A + A ++ M +G P++ T+ +LI+ +CK G
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ M + G D+ Y +LI + KA +DE+ LL V G P Y+
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 293
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + D+A +K +G PP+ +Y+TLI + G+ EA + MT G
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ + DGL G+ D A
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAH 378
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ GL + L+ A +++ + +G PD+ +++LI+ +CK+G+V+
Sbjct: 283 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 342
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + G ADV TY LI + KAG +DEA LL +V G P Y +IKG
Sbjct: 343 FDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 402
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA-NYLMEMTEMGLTP 183
D+A E++ P+ Y LI R R AA +Y EM + G+ P
Sbjct: 403 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIP 462
Query: 184 ISRCFDLVTDGLK 196
+ ++ +GLK
Sbjct: 463 DHITYSILLEGLK 475
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV GL AG +E+A + KM + S P++ T++ LI+ +CK+ V VE+ S+
Sbjct: 83 NILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVLIDGLCKANRVSQAVELLESMKA 141
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY IL+ + K + A+ +L +++ G P Y ++ G R + D
Sbjct: 142 RGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSD 201
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ +G PN Y TLI + GR +A L +M + G TP ++++ +
Sbjct: 202 ALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLIN 261
Query: 194 GLKNCGKHDLAEKIEQLE 211
GL C + E I L
Sbjct: 262 GL--CKADQVDESIALLR 277
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +LV GL + +A +++ +M+ G P+L T+NSL+ +C++
Sbjct: 139 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 198
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G +V TY LI + K G + +A +L ++++ G P +Y
Sbjct: 199 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 258
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + Q D++ G P+ Y+++I R R EA L+ + G
Sbjct: 259 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 318
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL GK D A
Sbjct: 319 CPPDVILYSTLIDGLCKAGKVDEA 342
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D +P V +L+ GL A + A +++ M +G PD+ T+ L++ +CK +V
Sbjct: 106 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 165
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E+ + G ++ TY L+ + +A + +A L+ ++ G P Y +I
Sbjct: 166 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 225
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ DA +++ KG P+ +Y LI + + E+ L G+
Sbjct: 226 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 285
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P + V GL + D A ++
Sbjct: 286 PDVVTYSSVIYGLCRSNRLDEACRL 310
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V L+ GL AG ++ A + M G D D+ T+++LI+ +CK+G V+
Sbjct: 317 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDE 376
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + ++G+ TY LI + +DEA L+ + P Y +I
Sbjct: 377 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 436
Query: 124 GAFRRGQFDD-AFCFFSEIKIKGHPPNRPVYTTLI 157
G R + D A +F E+ G P+ Y+ L+
Sbjct: 437 GMCRMERVDSAALDYFQEMIDNGVIPDHITYSILL 471
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M G +P++ T+NSLI+ +CK+ E + E++ + + + TY L+ + + G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++ A L +++ + S + ++ G R G+ + A FF ++ + PN Y+
Sbjct: 61 LERAMALFQEMLDRRSHDVIS-FNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSV 118
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
LI + R +A L M G +P + ++ DGL C + +A E L
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL--CKESKVAAAWEVLR 172
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ GL G ++ A M+ MI +G PDL +N LI +CK+ +
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + G DV TY +I + ++ +DEA RLL + G P LY+
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 406
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+AF + + G + Y+TLI + GR EA L M MG
Sbjct: 407 LIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 466
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + ++ + GL C + L E IE +E RS
Sbjct: 467 TPPSTMTYNSLIKGL--CDLNHLDEAIELVEEMERS 500
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + + L+ GL A + A ++ M +G P++ T+ +LI+ +CK G
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ M + G D+ Y +LI + KA +DE+ LL V G P Y+
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + D+A +K +G PP+ +Y+TLI + G+ EA + M G
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ + DGL G+ D A
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAH 456
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +LV GL + +A +++ +M+ G P+L T+NSL+ +C++
Sbjct: 217 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 276
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G +V TY LI + K G + +A +L ++++ G P +Y
Sbjct: 277 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 336
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + Q D++ G P+ Y+++I R R EA L+ + G
Sbjct: 337 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 396
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL GK D A
Sbjct: 397 CPPDVILYSTLIDGLCKAGKVDEA 420
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 9/212 (4%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-------DPDLETFNSLIETICKSG 59
+P + + L+ GL G LE A + +M+ + S P++ T++ LI+ +CK+
Sbjct: 146 SPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKAN 205
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V VE+ S+ G DV TY IL+ + K + A+ +L +++ G P Y
Sbjct: 206 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 265
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G R + DA ++ +G PN Y TLI + GR +A L +M +
Sbjct: 266 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 325
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G TP ++++ +GL C + E I L
Sbjct: 326 GGTPDLMIYNMLINGL--CKADQVDESIALLR 355
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V L+ GL AG ++ A + M G D D+ T+++LI+ +CK+G V+
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDE 454
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + ++G+ TY LI + +DEA L+ + P Y +I
Sbjct: 455 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 514
Query: 124 GAFRRGQFDDAFCFFSEIKIK-----GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G R + D A + K + G + Y++LI + GR EA +Y EM +
Sbjct: 515 GMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMID 574
Query: 179 MGLTPISRCFDLVTDGLK 196
G+ P + ++ +GLK
Sbjct: 575 NGVIPDHITYSILLEGLK 592
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D +P V +L+ GL A + A +++ M +G PD+ T+ L++ +CK +V
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E+ + G ++ TY L+ + +A + +A L+ ++ G P Y +I
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ DA +++ KG P+ +Y LI + + E+ L G+
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P + V GL + D A ++
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRL 388
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V L++G G ++ A++ ++M + P++ + LI+ +CK+ +
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ ++ G AD Y L+ + K +D+A +LH + + G P Y +I G
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI-S 185
+ + D A F +K P+ Y TL+ R G+ A EM + +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 186 RC------FDLVTDGLKNCGKHDLAEKIEQLE 211
RC + ++ DGL C + +++ +E LE
Sbjct: 186 RCSPNVITYSVLIDGL--CKANRVSQAVELLE 215
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 70/174 (40%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
PD+ T+ +L+ C+ GE++ + + +V ILI + KA +A R
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ G +Y ++ G ++ + D A E++ G PN Y +LI +
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
A M + +P ++ + DGL GK + A + Q + RS
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS 180
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V ++ G+ + G E AK + N+M+ +G P++ TFN LI+ +CK+G+
Sbjct: 264 MKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGK 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G D TY LI G ID+A L ++ G Y
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A + E+ K P Y TL+T R G+ +A N EM
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
LTP S ++++ DGL C + L+E +E
Sbjct: 444 LTPESCTYNILLDGL--CKNNHLSEAME 469
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P V ++L+ L AG +E A ++ MI++G PD T+N+LI+ C G
Sbjct: 299 MVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ S+ G D +Y +LI K+G + EA +L ++ P Y
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G FR G+ DA+ F E+K+ P Y L+ + EA +
Sbjct: 419 LLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD 478
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + DGL K ++A ++
Sbjct: 479 FQPSIQIFNCLIDGLCKARKIEIAREL 505
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L G ++ K++ +M +G PD+ ++S+I +C +G E ++ + G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T+ +LI A+ KAG ++EA LL +++ G +P Y +I G G+ DDA
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ KG + Y LI + GR VEA EM + P ++ + GL
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423
Query: 196 KNCGK 200
GK
Sbjct: 424 FREGK 428
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 8/220 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++L+ N ++ ++ +M+++G P+ TF SL++ +C
Sbjct: 118 MSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSR 177
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF-----P 115
+ + + ++G +V TY L+ + G A +L H + +G+ F P
Sbjct: 178 ISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKL-HEEMLNGNGGFGVTIKP 236
Query: 116 SL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+L Y II + G D F E+K +G P+ Y+++I GR+ A
Sbjct: 237 NLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLF 296
Query: 174 MEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
EM + G+ P F+++ D L GK + A + +L +
Sbjct: 297 NEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ 336
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ GL G + A + +M P+ T+N L++ +CK+ + +E+
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ + + + LI + KA I+ A L + L +G P Y +I G +
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCK 530
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
GQ ++A F ++ KG PN + TL+ + + L EM E +P +
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST 590
Query: 188 FDLVTDGL 195
+V D L
Sbjct: 591 ISIVVDLL 598
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 76/169 (44%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ GL +L A ++ + + P ++ FN LI+ +CK+ ++E E++ +
Sbjct: 452 NILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSH 511
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +V TY ++I + K+G ++ A L + E G P + +++G + +
Sbjct: 512 EGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQK 571
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
E+ K P+ + ++ + + ++ E + L G T
Sbjct: 572 VVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQT 620
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G P V +++ GL +G LE+AK + M ++G P+L TFN+L+ C++ E
Sbjct: 509 LSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDE 568
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
++ VE+ + + D ST I++ +SK DE +R
Sbjct: 569 MQKVVELLQEMAEKDFSPDASTISIVVDLLSK----DEKYR 605
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Query: 3 DKGFNPPVRGR-DLLVQGLLNAGYLESAK--QMVNKMIKQGSDPDLETFNSLIETICKSG 59
D N P RG+ + ++ +G+++ ++ + N +I P + +FN+L+ + K
Sbjct: 47 DTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIK 106
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ +Y + +G D T ILI +D +L ++ GH+P +
Sbjct: 107 RYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFT 166
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
++KG + +A ++ G+ PN Y TL+ +C G
Sbjct: 167 SLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTG 211
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 2/169 (1%)
Query: 43 PDLETFNSLIETICKSGEVEF--CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
PD + +++ CKSG ++ ++ + + +S++ L+ AV+K +
Sbjct: 53 PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112
Query: 101 RLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
L + G P +I + D E+ +GH PN +T+L+
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G R EA L +M MG P + + +GL G LA K+ +
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHE 221
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 7/219 (3%)
Query: 1 MSDKGFNPPVRGRD-----LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETI 55
M+ +G P V D +L+ G AG E A + +M+ + PD+ TF +LI+ +
Sbjct: 277 MASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 336
Query: 56 CKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
CK+G+VE ++ + LG +V TY L+ + K+G I+EA + L +V G P
Sbjct: 337 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y ++ R + DDA SE+K G P+ Y L+ + G+ +A L E
Sbjct: 397 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 456
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
M G P S F GL G +LA +E L V L
Sbjct: 457 MVGKGHQPDSFTFAACFSGLHRSG--NLAGTMELLRVVL 493
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V + LV GL A +E A M+ M+ +G PD+ T++ L++ CK+ V+
Sbjct: 211 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 270
Query: 65 VEMYYSVCKLGSCADV-----STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E+ + + G +V T+ ILI KAG ++A L +V P +
Sbjct: 271 LELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 330
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + GQ + A + G PPN Y L+ + GR EA +L EM
Sbjct: 331 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS 390
Query: 180 GLTPIS 185
G P S
Sbjct: 391 GCVPDS 396
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+ GL AG +E+A+ +++ M G P++ T+N+L+ +CKSG
Sbjct: 317 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D TY L+ A+ +A D+A +L+ L G +P Y
Sbjct: 377 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++ G+ + A E+ KGH P+ + + R G L + G
Sbjct: 437 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKG 496
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+ P + + D + GK D
Sbjct: 497 MLPDATTCSSILDWVCRSGKLD 518
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G ++ A + + MI G P++ T+N+L+ +CK+ ++E M S+ G
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP---FPS--LYAPIIKGAFRRGQ 130
DV TY +L+ A KA +DEA LLH + G P P + +I GA + G
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
F+ A F E+ K P+ + LI + G+ A + L M +G+ P ++
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 191 VTDGLKNCGK 200
+ GL G+
Sbjct: 367 LVHGLCKSGR 376
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 41/249 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + + ++ GL + L + ++ +++++G PD+ T+N+LI+++CK+G+
Sbjct: 28 MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 87
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--- 117
+E ++ + G +V TY +LI + K G IDEA L+ + + P++
Sbjct: 88 LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147
Query: 118 ------------------------------------YAPIIKGAFRRGQFDDAFCFFSEI 141
++ +I G + GQ D+A F ++
Sbjct: 148 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 207
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
G+ PN Y L+ + + A + M + G+TP + ++ D C
Sbjct: 208 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF--CKAS 265
Query: 202 DLAEKIEQL 210
+ E +E L
Sbjct: 266 RVDEALELL 274
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 103/254 (40%), Gaps = 44/254 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD------------------ 42
MS +G P V +L+ GL G ++ A++++ +M ++ D
Sbjct: 98 MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 157
Query: 43 ---------------------PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
PD TF++LI+ +CK G+++ ++ + G +V
Sbjct: 158 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 217
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY L+ + KA ++ A ++ ++V+ G P Y+ ++ + + D+A +
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 277
Query: 142 KIKGHPPN-----RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+G PN + + LI + G F +A+ EM L P F + DGL
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 337
Query: 197 NCGKHDLAEKIEQL 210
G+ + A I L
Sbjct: 338 KAGQVEAARDILDL 351
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVN-KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
++++Q L AG A ++ +M + G P + T+N++I +CKS ++ +E++ +
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G DV TY LI ++ KAG ++EA RL ++ G P Y+ +I G + G+ D
Sbjct: 65 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124
Query: 133 DAFCFFSEIKIKGHP--PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL--TPISRCF 188
+A E+ K PN Y + + + EA + + + L +P + F
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184
Query: 189 DLVTDGLKNCGKHDLA 204
+ DGL CG+ D A
Sbjct: 185 STLIDGLCKCGQIDEA 200
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLH-NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
V+ Y I++ ++ +AG A + + DG P Y II G + F
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
E+ +GH P+ Y TLI + G EA +M+ G P + ++ +GL
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 199 GKHDLAEKIEQ 209
G+ D A ++ Q
Sbjct: 121 GRIDEARELIQ 131
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V+ L+ GL G LE A + +KM+K+G P+ T+N+LI +C G
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++++ + GS A+ TY +I + G I++A L +++ G P Y
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G ++A +K G P+ Y L++ + G+ A+ Y EM E G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA----EKIEQL 210
L P + + DG GK D+A E++E++
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ L G +A ++ + M GS + +T+N +I+ +C G+
Sbjct: 406 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 465
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + K+G V TY LI G ++ A RLL + E+G P Y
Sbjct: 466 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 525
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + A +F E+ G PN YTTLI + G+ A + L M EMG
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ V +GL + AEKI
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEAEKI 612
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 85/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL G +E A + KM+K G P + T+N+LI G V + + + G
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY L+ SK G ++ A +VE G NP P Y +I G + G+ D A
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PN Y +I + RF EA +M E GL P + + DGL
Sbjct: 576 SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635
Query: 196 KNCGKHDLAEKI 207
G+ A KI
Sbjct: 636 CRNGRTQFAFKI 647
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P + LV GL G A+Q+V M ++G PD E + SL+ CK+ E
Sbjct: 780 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 839
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++++S+ G +S Y+ LI A+ KAG ++EA L N++E N ++
Sbjct: 840 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTV 899
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
++ G + G+ D ++ K PN Y L R G+ +E+
Sbjct: 900 LVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + LV G G LESA +M++ G +P+ ++ +LI+ K G+
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + ++G +V +Y +I +SK EA ++ + E G P Y
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ AF F +++ + PN Y++LI + G+ EA L EM G
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 690
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P F + DG G+ D A
Sbjct: 691 LAPDEVTFTSLIDGFVVLGRIDHA 714
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ G L G + +A ++++ M + G +PD T+N L+ K G++E
Sbjct: 483 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 542
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G + +Y LI SK G +D A LL + E G NP Y +I G +
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+F +A ++ +G PN YTTLI R GR A +M + P
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662
Query: 188 FDLVTDGLKNCGKHDLAE 205
+ + GL GK D AE
Sbjct: 663 YSSLIYGLCQEGKADEAE 680
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G NP V + ++ GL A+++ +KM +QG P++ T+ +LI+ +C++G
Sbjct: 581 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+F ++++ + K ++ TY LI + + G DEA LL + G P +
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE------------ 168
+I G G+ D AF + G PN Y+ L+ + +E
Sbjct: 701 LIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYS 760
Query: 169 ------------AANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+N L M+E+G P + + GL G+ AE++
Sbjct: 761 FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 811
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P L+ GL N G ++ A M+ +MI++G +P + T+ I +C
Sbjct: 301 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + K G +V TY LI +S+ G ++ A L H ++++G P Y
Sbjct: 361 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+F A F ++ G N Y +I GG +A +M +MG
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++ + +G G + A ++ L
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDL 510
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF + + L+ L +E A+ + +M+ G P L TFN+LI + K G+
Sbjct: 196 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 255
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + DV TY LI + +D AF + +V++G +P Y+
Sbjct: 256 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 315
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A E+ KG P YT IT EA + M + G
Sbjct: 316 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 375
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + + GL GK ++A
Sbjct: 376 CRPNVQTYTALISGLSRLGKLEVA 399
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ L G + A+ +++++ + PD+ T+ SLI C++
Sbjct: 231 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G + TY LI + G +DEA +L ++E G P Y
Sbjct: 291 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I ++A + +K +G PN YT LI+ R G+ A +M + G
Sbjct: 351 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 410
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ + + L G+ A KI
Sbjct: 411 LVPNTVTYNALINELCVGGRFSTALKI 437
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ F P R L+++ N + +N++ G L + N+L+ + K VE
Sbjct: 163 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 222
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+Y + G + T+ LI +SK G + EA +L + + +P Y +I
Sbjct: 223 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 282
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R D AF F + +G PN Y+TLI GR EA + L EM E G+
Sbjct: 283 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 342
Query: 183 PISRCFDLVTDGL 195
P + L L
Sbjct: 343 PTVYTYTLPITAL 355
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+P V L+ G L+ A + ++M+K+G DP+ T+++LI +C G V+ +
Sbjct: 271 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 330
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+M + + G V TY + I A+ +EA L+ + + G P Y +I G
Sbjct: 331 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 390
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
R G+ + A + ++ +G PN Y LI GGRF A M G +
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450
Query: 186 RCFDLVTDGL 195
+ ++ + GL
Sbjct: 451 QTYNEIIKGL 460
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
E ++ +M + G +P L+T+++L+ +C+ G ++ + + G C D Y
Sbjct: 770 FEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 829
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ A K +D A ++ H++ G S+Y +I + GQ ++A F + K
Sbjct: 830 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 889
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK----H 201
+ V+T L+ + G L M TP + + ++ L GK
Sbjct: 890 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 949
Query: 202 DLAEKIEQLEVS 213
LA+K++ L+ S
Sbjct: 950 PLADKLKVLKDS 961
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+K P V + ++ G A +ESAK ++++M ++G PD+ T N +I T C G+++
Sbjct: 37 EKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKID 96
Query: 63 FCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++++ + K +C + TY ILI A G IDEA +LL ++ G P Y I
Sbjct: 97 LALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVI 156
Query: 122 IKGAFRRGQFDDAFCF-----------------------------------FSEIKIKGH 146
+G + G+ D AF F SEI +G
Sbjct: 157 TRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGC 216
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN Y+ LI+ R G+ E+ N + M E GLTP + C+D + GK D+A
Sbjct: 217 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ +G P V ++L++ LLN G + ++ ++++ +G +P++ T++ LI ++C+ G+
Sbjct: 176 LNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGK 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + + G D Y LI A + G +D A L ++ DG P Y
Sbjct: 236 IEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNT 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + G D A F ++ G PPN Y T+++ G A + +M G
Sbjct: 296 IMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKG 355
Query: 181 LTP 183
+ P
Sbjct: 356 IDP 358
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P D L+ G L+ A + ++ MI G PD+ +N+++ +CK+G
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE++ + ++G +VS+Y ++ A+ +G A ++ ++ G +P Y
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNS 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G D+A +++ PN Y T++ + R +A L M E G
Sbjct: 366 LISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENG 425
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + L+ +G+ G A ++
Sbjct: 426 CQPNETTYTLLIEGIGFSGSRTQAMEL 452
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D P + +L++ + G ++ A +++++M+ +G +PD T+N + +CK G+
Sbjct: 106 LKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGK 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E ++ G DV TY IL+ A+ G DE + + + G P Y+
Sbjct: 166 VDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ +++ +K KG P+ Y LI R G+ A +L M G
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + L G D A +I
Sbjct: 286 FLPDIVNYNTIMAALCKNGNGDHAVEI 312
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V +L+ L G +E + +V M ++G PD ++ LI C+ G+++
Sbjct: 214 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 273
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E + G D+ Y ++ A+ K G D A + L E G P S Y ++
Sbjct: 274 AIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLS 333
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G A S++ KG P+ Y +LI+ R G EA L +M P
Sbjct: 334 ALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQP 393
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ V GL C H + + IE L
Sbjct: 394 NIVSYKTVLLGL--CKAHRIDDAIEVL 418
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +++ +GL G ++ A + V + +G PD+ T+N L+ + G+
Sbjct: 141 MLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGK 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G +V TY ILI ++ + G I+E+ L+ + E G P Y P
Sbjct: 201 WDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDP 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ D A F + G P+ Y T++ + G A ++ E+G
Sbjct: 261 LIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVG 320
Query: 181 LTPISRCFDLVTDGLKNCG 199
P ++ + L + G
Sbjct: 321 CPPNVSSYNTMLSALWSSG 339
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 35/141 (24%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G P V + ++ L ++G A M+++M+ +G DPD+ T+NSLI +C+ G
Sbjct: 316 LDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGM 375
Query: 61 VEFCVEMY--------------YSVCKLGSCA---------------------DVSTYKI 85
V+ + + Y LG C + +TY +
Sbjct: 376 VDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTL 435
Query: 86 LIPAVSKAGMIDEAFRLLHNL 106
LI + +G +A L ++L
Sbjct: 436 LIEGIGFSGSRTQAMELANSL 456
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + + GL AG L+ +M+ +M + G PD+ TF S+I +CK+
Sbjct: 142 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANR 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G D TY I++ +S+A +D +L ++V+ GH + YAP
Sbjct: 202 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAP 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G + A + + G + I R G+F A N L+ M E G
Sbjct: 262 LIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P ++ V DGL G D A K+ +
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSR 350
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ + F + L+ GL A A ++++ M G D + T+ +LI+ +CKSG+
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G +V TY LI + KA +A + + ++ G P Y
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + DDA E+ I+ G P+ Y T I+ + G+ + L EM
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G++P F + GL + D A ++
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQV 208
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ AG +ESA + ++ G ++ T N+ I +C+SG+ + + + G
Sbjct: 262 LIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG-HNPFPSLYAPIIKGAFRRGQFDDA 134
S ++ +Y +I + K+G +D+A++L +++ G P + +I G + G+ A
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381
Query: 135 FCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
E+K K P+ Y T+I + G +A L EM +G
Sbjct: 382 QQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG N V ++L GL + AK ++N M+++G P++ TF IE CK G
Sbjct: 418 MEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGN 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G ++ TY LI A K + +A ++ ++ G P Y+
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSS 537
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A F+E+++KG N YT++I+ + GR EA EM ++G
Sbjct: 538 LIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIG 597
Query: 181 LTPISRCF 188
L P R F
Sbjct: 598 LIPDDRVF 605
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS + P L+ G+ AG +E+A+ ++ +M +G D +L FN+ ++ C+ G+
Sbjct: 348 MSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGK 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + K G ADV TY IL + K DEA +L+++VE G P +
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTM 467
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + G +A F +++ KG PN Y TLI + + +A EM G
Sbjct: 468 FIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKG 527
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + G G+ D A K+
Sbjct: 528 LLPDLYTYSSLIHGECIVGRVDEALKL 554
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + ++ G L A+++ M K+G P++ T+N+LI+ CK +
Sbjct: 453 MVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEK 512
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G D+ TY LI G +DEA +L + + G + Y
Sbjct: 513 VKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTS 572
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G + G+ D+AF + E+ G P+ V+T+L+
Sbjct: 573 MISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 1/206 (0%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSGEVEFC 64
F V+ L++ L G +E AK+++++M+ +G P++ T+N+L+ + +
Sbjct: 212 FEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGV 271
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + K V+TY ILI S +G I+EA ++ + E +Y+ +I
Sbjct: 272 DEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISW 331
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ R G AF F E+ + PN Y LI + G+ A L+EM G+
Sbjct: 332 SRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLN 391
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
F+ DG GK D A +++ +
Sbjct: 392 LVIFNTTMDGYCRRGKMDEALRLQAI 417
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K V ++ G ++ A + ++M ++ P+ T+ +LI +CK+G+
Sbjct: 313 MREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQ 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G ++ + + + G +DEA RL + + G N Y
Sbjct: 373 MEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNI 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + ++D+A C + + KG PN +T I + + G EA +M + G
Sbjct: 433 LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P ++ + D K A KI+
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIK 520
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+Q ++G +E A+++ +M ++ + D+ ++S+I + G ++ ++ + +
Sbjct: 292 ILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQR 351
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+ TY LI V KAG ++ A LL + G + ++ + G RRG+ D+A
Sbjct: 352 DIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEA 411
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ ++ KG + Y L + R+ EA L M E G+ P F + +
Sbjct: 412 LRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEI 471
Query: 195 LKNCGKHDLAE 205
C + +LAE
Sbjct: 472 Y--CKEGNLAE 480
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ G G ++ A ++ N+M +G ++ T+ S+I + K G
Sbjct: 523 MINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGR 582
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSK 92
+ ++Y + K+G D + L+ + K
Sbjct: 583 ADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K NP V ++L+ L G ++ AK ++ M K+G P + T+++L++ C GEV+
Sbjct: 214 KNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQN 273
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++++ ++G +V +Y I+I + K +DEA LL ++ P Y +I
Sbjct: 274 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 333
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ A +E+ +G P + YT+L+ + +A M+M E G+ P
Sbjct: 334 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DGL G+ A+++ Q
Sbjct: 394 TMYTYTALIDGLCKGGRLKNAQELFQ 419
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V ++++ GL ++ A ++ +M+ + PD T+NSLI+ +CKSG
Sbjct: 281 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G ADV TY L+ A+ K +D+A L + E G P Y
Sbjct: 341 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + +KG + YT +I+ + G F EA +M + G
Sbjct: 401 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+++ L ++D AEK+
Sbjct: 461 CIPNAVTFEIIIRSLFEKDENDKAEKL 487
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ G G +++AKQ+ + M++ G +P++ ++N +I +CK
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + D TY LI + K+G I A L++ + G Y
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + D A F ++K +G P YT LI +GGR A + G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ GL G D A I+
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIK 453
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G ++ + +K++ QG D ++ +L+ +CK GE
Sbjct: 75 GYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCA 134
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V++ + + +V Y +I + K +++EA+ L + G P Y +I G
Sbjct: 135 VKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYG 194
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ AF E+ +K P +Y LI + G EA N L MT+ G+ P
Sbjct: 195 FCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPG 254
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + DG G+ A++I
Sbjct: 255 VVTYSTLMDGYCLVGEVQNAKQI 277
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG ++L+ + G + + ++ K++K G PD T N+L++ +C GE
Sbjct: 36 MEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + V G D +Y L+ + K G A +LL + + P +Y
Sbjct: 96 VKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNT 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + ++A+ +SE+ +G P+ YTTLI G+ + A + L EM
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P ++++ + L C + ++ E L V
Sbjct: 216 INPGVYIYNILINAL--CKEGNVKEAKNLLAV 245
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V L+ L L+ A + KM ++G P + T+ +LI+ +CK G
Sbjct: 351 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 410
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G C DV TY ++I + K GM DEA + + ++G P +
Sbjct: 411 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEI 470
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+ F + + D A E+ KG
Sbjct: 471 IIRSLFEKDENDKAEKLLHEMIAKG 495
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF L+ GL G A +++ + + + P++ +N++I+ +CK V
Sbjct: 109 QGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++Y + G D TY LI G + AF LL ++ NP +Y +I
Sbjct: 169 AYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILIN 228
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G +A + + +G P Y+TL+ G A M +MG+ P
Sbjct: 229 ALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNP 288
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++++ +GL C + D A
Sbjct: 289 NVYSYNIMINGLCKCKRVDEA 309
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ + ++ L +A + +M +G + T N LI C G++ F +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ KLG D T L+ + G + ++ +V G Y ++ G +
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ A I+ + PN +Y T+I + EA + EM G+ P
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 63/153 (41%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + FN ++ ++ K + + + + G A+ T ILI G + +F +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L +++ G+ P ++KG +G+ + F ++ +G + Y TL+ +
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
G A L + + P ++ + DGL
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGL 160
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G A + AKQ+ N+MI QG PD+ ++N+LI+ +C+ G
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 452
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ ++ G+ D+ TY IL+ K G + +AFRL + P +Y
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + +A FSE+ ++G PN +YTT+I + G EA M E G
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Query: 181 LTPISRCFDLVTDGL 195
P ++++ G
Sbjct: 573 CPPNEFSYNVIIRGF 587
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V L+ G + A+++ + MI +G PD+ ++N LI CK+
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ +Y LI + + G + EA L N++ +G+ P Y+
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G AF F ++ PN +Y LI + EA E+ G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + + + +GL C + L E +E
Sbjct: 538 LQPNVQIYTTIINGL--CKEGLLDEALE 563
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G + + L+ GL G A ++ + M+ +G PD+ T+ ++I +CK GE
Sbjct: 187 GLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAA 246
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G DV TY +I ++ K ++EA + + G +P Y +I+G
Sbjct: 247 AGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQG 306
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +A +E+ PN ++ LI + + G EA L MTEMG+ P
Sbjct: 307 LCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEP 365
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +L+ ++ ++ K+IK G + TFN+LI +CK G+
Sbjct: 148 MELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGK 207
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE++ + G DV TY +I + K G A L + E G P Y+
Sbjct: 208 FGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYST 267
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + + ++A FS +K KG PN Y +LI R+ EA+ L EM +
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327
Query: 181 LTPISRCFDLVTD 193
+ P F L+ +
Sbjct: 328 IMPNIVTFSLLIN 340
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + + L+QGL N A M+N+M+ P++ TF+ LI CK G
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ ++G +V TY L+ S + EA +L ++ G P Y
Sbjct: 348 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A F+E+ +G P+ Y TLI + GR EA + M G
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 181 LTPISRCFDLVTDGL 195
P + ++ DG
Sbjct: 468 NLPDLCTYSILLDGF 482
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ L + A + + M +G P++ T+NSLI+ +C
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
M + L ++ T+ +LI K G + EA +L + E G P Y+
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + +A F + KG P+ Y LI + R EA EM G
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 181 LTPISRCFDLVTDGLKNCGK----HDL 203
LTP ++ + DGL G+ HDL
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDL 459
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ G GYL A ++ M P++ +N LI+ +CKS
Sbjct: 463 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G +V Y +I + K G++DEA N+ EDG P Y
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + A E++ KG
Sbjct: 583 IIRGFLQHKDESRAVQLIGEMREKG 607
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 25 YLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYK 84
Y ++ + +M G PD T + LI + V+ + + KLG + T+
Sbjct: 137 YHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFN 196
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
LI + K G +A L ++V G+ P Y II G + G+ A F ++
Sbjct: 197 TLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA 256
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
G P+ Y+T+I + R EA + M G++P ++ + GL N
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 309
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V+ L+ GL G LE A + +KM+K+G P+ T+N+LI +C G
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++++ + GS A+ TY +I + G I++A L +++ G P Y
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G ++A +K G P+ Y L++ + G+ A+ Y EM E G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P + + DG GK D+A
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIA 532
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ L G +A ++ + M GS + +T+N +I+ +C G+
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + K+G V TY LI G ++ A RLL + E+G P Y
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + A +F E+ G PN YT LI + G+ A + L M EMG
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ V +GL + AEKI
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKI 570
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 85/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL G +E A + KM+K G P + T+N+LI G V + + + G
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY L+ SK G ++ A +VE G NP P Y +I G + G+ D A
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PN Y +I + RF EA +M E GL P + + DGL
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Query: 196 KNCGKHDLAEKI 207
G+ A KI
Sbjct: 594 CRNGRTQFAFKI 605
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P + LV GL G A+Q+V M ++G PD E + SL+ CK+ E
Sbjct: 640 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 699
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++++S+ G +S Y+ LI A+ KAG ++EA L N++E N ++
Sbjct: 700 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTV 759
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
++ G + G+ D ++ K PN Y L R G+ +E+
Sbjct: 760 LVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 808
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ G L G + +A ++++ M + G +PD T+N L+ K G++E
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G + +Y LI SK G +D A LL + E G NP Y +I G +
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+F +A ++ +G PN YTTLI R GR A +M + P
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
+ + GL GK D AE++ ++
Sbjct: 621 YSSLIYGLCQEGKADEAERMSEI 643
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 4/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + LV G G LESA +M++ G +P+ ++ +LI+ K G+
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + ++G +V +Y +I +SK EA ++ +VE G P Y
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ AF F +++ + PN Y++LI + G+ EA M+E+G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIG 644
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + GL G+ AE++
Sbjct: 645 CEPTLDTYSTLVSGLCRKGRFYEAEQL 671
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P L+ GL N G ++ A M+ +MI++G +P + T+ I +C
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + K G +V TY LI +S+ G ++ A L H ++++G P Y
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+F A F ++ G N Y +I GG +A +M +MG
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++ + +G G + A ++ L
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF + + L+ L +E A+ + +M+ G P L TFN+LI + K G+
Sbjct: 154 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + DV TY LI + +D AF + +V++G +P Y+
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A E+ KG P YT IT EA + M + G
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + + GL GK ++A
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVA 357
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ L G + A+ +++++ + PD+ T+ SLI C++
Sbjct: 189 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 248
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G + TY LI + G +DEA +L ++E G P Y
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I ++A + +K +G PN YT LI+ R G+ A +M + G
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ + + L G+ A KI
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKI 395
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ F P R L+++ N + +N++ G L + N+L+ + K VE
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+Y + G + T+ LI +SK G + EA +L + + +P Y +I
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R D AF F + +G PN Y+TLI GR EA + L EM E G+
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300
Query: 183 PISRCFDLVTDGL 195
P + L L
Sbjct: 301 PTVYTYTLPITAL 313
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+P V L+ G L+ A + ++M+K+G DP+ T+++LI +C G V+ +
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+M + + G V TY + I A+ +EA L+ + + G P Y +I G
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
R G+ + A + ++ +G PN Y LI GGRF A M G +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 186 RCFDLVTDGL 195
+ ++ + GL
Sbjct: 409 QTYNEIIKGL 418
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 8/210 (3%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + L+ GL G + A+ +M + G +P L+T+++L+ +C+ G ++
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 671
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G C D Y L+ A K +D A ++ H++ G S+Y +I +
Sbjct: 672 VKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCK 731
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
GQ ++A F + K + V+T L+ + G L M TP +
Sbjct: 732 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 791
Query: 188 FDLVTDGLKNCGK----HDLAEKIEQLEVS 213
+ ++ L GK LA+K++ L+ S
Sbjct: 792 YVILGRELSRIGKSIESEPLADKLKVLKDS 821
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V+ L+ GL G LE A + +KM+K+G P+ T+N+LI +C G
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++++ + GS A+ TY +I + G I++A L +++ G P Y
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G ++A +K G P+ Y L++ + G+ A+ Y EM E G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P + + DG GK D+A
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIA 532
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ L G +A ++ + M GS + +T+N +I+ +C G+
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + K+G V TY LI G ++ A RLL + E+G P Y
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + A +F E+ G PN YT LI + G+ A + L M EMG
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ V +GL + AEKI
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKI 570
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 85/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL G +E A + KM+K G P + T+N+LI G V + + + G
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY L+ SK G ++ A +VE G NP P Y +I G + G+ D A
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PN Y +I + RF EA +M E GL P + + DGL
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Query: 196 KNCGKHDLAEKI 207
G+ A KI
Sbjct: 594 CRNGRTQFAFKI 605
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + LV G G LESA +M++ G +P+ ++ +LI+ K G+
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + ++G +V +Y +I +SK EA ++ +VE G P Y
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ AF F +++ + PN Y++LI + G+ EA L EM G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 648
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P F + DG G+ D A
Sbjct: 649 LAPDEVTFTSLIDGFVVLGRIDHA 672
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ G L G + +A ++++ M + G +PD T+N L+ K G++E
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G + +Y LI SK G +D A LL + E G NP Y +I G +
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+F +A ++ +G PN YTTLI R GR A +M + P
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 188 FDLVTDGLKNCGKHDLAE 205
+ + GL GK D AE
Sbjct: 621 YSSLIYGLCQEGKADEAE 638
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G NP V + ++ GL A+++ +KM++QG P++ T+ +LI+ +C++G
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+F ++++ + K ++ TY LI + + G DEA LL + G P +
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 658
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G G+ D AF + G PN Y+ L+
Sbjct: 659 LIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLL 695
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G NP L+ G G ++ A ++ +M + G +P++E++N++I + K
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G +V TY LI + + G AF++ H++ + P Y+
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A E++ KG P+ +T+LI GR A L M +MG
Sbjct: 624 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMG 683
Query: 181 LTPISRCFDLVTDGLK 196
P R + ++ GL+
Sbjct: 684 CKPNYRTYSVLLKGLQ 699
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P L+ GL N G ++ A M+ +MI++G +P + T+ I +C
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + K G +V TY LI +S+ G ++ A L H ++++G P Y
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+F A F ++ G N Y +I GG +A +M +MG
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++ + +G G + A ++ L
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF + + L+ L +E A+ + +M+ G P L TFN+LI + K G+
Sbjct: 154 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + DV TY LI + +D AF + +V++G +P Y+
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A E+ KG P YT IT EA + M + G
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + + GL GK ++A
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVA 357
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ L G + A+ +++++ + PD+ T+ SLI C++
Sbjct: 189 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 248
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G + TY LI + G +DEA +L ++E G P Y
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I ++A + +K +G PN YT LI+ R G+ A +M + G
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ + + L G+ A KI
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKI 395
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ F P R L+++ N + +N++ G L + N+L+ + K VE
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+Y + G + T+ LI +SK G + EA +L + + +P Y +I
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R D AF F + +G PN Y+TLI GR EA + L EM E G+
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300
Query: 183 PISRCFDLVTDGL 195
P + L L
Sbjct: 301 PTVYTYTLPITAL 313
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+P V L+ G L+ A + ++M+K+G DP+ T+++LI +C G V+ +
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+M + + G V TY + I A+ +EA L+ + + G P Y +I G
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
R G+ + A + ++ +G PN Y LI GGRF A M G +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 186 RCFDLVTDGL 195
+ ++ + GL
Sbjct: 409 QTYNEIIKGL 418
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G + A+ ++ +M ++G PD TF SLI+ G ++ + + +G
Sbjct: 624 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMG 683
Query: 76 SCADVSTYKILIPAVSKAGMI--DEAFRLLHNLVEDGHNPFPSLYAPI 121
+ TY +L+ + K ++ ++ F L+ N G NP L+ PI
Sbjct: 684 CKPNYRTYSVLLKGLQKECLLLEEKIFPLVDNYFL-GCNPL-QLHRPI 729
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G +P ++L+ G G ++ A ++ +M+ G +P + T+NSL+ CK +
Sbjct: 34 MLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETK 93
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL-HNLVEDGHNPFPSLYA 119
++ +E++ ++ + G DV TY +I + K G + EA +L H ++E G + Y
Sbjct: 94 MKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYN 153
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + A+ E+ KG+ P+ Y T+++ R G+ EA + M
Sbjct: 154 ALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR 213
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P ++ + D L GK D A K+
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G + + L+ GL +E A +++ +M +G PD T+N+++ +C+ G+
Sbjct: 140 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGK 199
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + S+ G DV Y L+ A+ K G DEA +L +++ G+ P Y
Sbjct: 200 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNS 259
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G R+ D+A F ++ G PN Y+ +++ R + +A L EM+++G
Sbjct: 260 ILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIG 319
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++++ DGL C K +L +K +L
Sbjct: 320 AVPDVVTYNILLDGL--C-KTNLVDKAHEL 346
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 104/206 (50%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG+ P + ++ GL ++ A++M KM+ G P+ T++ ++ C++ +V+
Sbjct: 248 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDD 307
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + K+G+ DV TY IL+ + K ++D+A L +V++G P Y+ ++
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + DA F + + P+ + L+ + G+ EA + L +MT G P
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQ 209
++ + +GL+ G+H A+++ Q
Sbjct: 428 DYVAYNTLMNGLRKQGRHIQADRLTQ 453
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMV-NKMIKQGSDPDLETFNSLIETICKSG 59
M++KGF P V ++ GL G + A +M+ +KMI++G + +N+LI +CK
Sbjct: 104 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDE 163
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E ++ + G D TY ++ + + G + EA + ++ G++P Y
Sbjct: 164 NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 223
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ ++ G+ D+A F ++ KG+ P+ Y +++ R EA +M
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + +V G K D A K+
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKV 311
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 1/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG+ P + ++ GL G + AKQ + M +G PD+ +N L++ + K G+
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ V G D TY ++ +++ +DEA + +V G P + Y+
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + DDA E+ G P+ Y L+ + +A M + G
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354
Query: 181 LTPISRCFDLVTDGLKNCGK-HD 202
P + +V +GL K HD
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHD 377
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +++ G A ++ A +++ +M K G+ PD+ T+N L++ +CK+
Sbjct: 280 MVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E++ ++ G D+ +Y +++ + K + +A L ++E P +
Sbjct: 340 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+A ++ G P+ Y TL+ + GR ++A M E G
Sbjct: 400 LMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459
Query: 181 LTPISRCF 188
+S CF
Sbjct: 460 F--LSDCF 465
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P+ TF ++++ CK G++ +++ + G D Y ILI +K G +DEA RL
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+V G P Y ++ + + +A F + KG P+ Y+T+I+ +
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 163 GGRFVEAANYLM-EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G+ EA L +M E G + + ++ + +GL C ++ + LE
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGL--CKDENIERAYKLLE 173
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P VR ++L+ G +G ++ AK ++ +M + PD+ T+++L+ C+ G
Sbjct: 211 MDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGR 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ +C G ++ TY I++ + K G +DEAF LL + E P +Y
Sbjct: 271 PQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTI 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+ + A FS + +KG P YT +I+ +GG EA EM G
Sbjct: 331 LIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNG 390
Query: 181 LTPISRCFDLVTDG-LKNCGKHDLAEKIEQL 210
P S ++++ G L+N + IE++
Sbjct: 391 CLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + ++ L + A ++M+K+G PD+ T++S++ C G
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + + + T+ ILI + K MI EA+ + + E G P Y
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R Q D+A F+ + KG PN Y LI + GR EA L EM+
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + G G+ A+++
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQEL 277
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ GL + + A ++ ++M+K G +PD+ T++++I +CK G
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G +V Y +I ++ K ++ EA +V++G P Y+ I+ G
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ ++A F ++ + PN+ +T LI + EA MTE GL P
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
++ + DG + + D A+K+
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKL 207
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M K G P L TFN+L+ +C ++ V+++ + K+G DV TY +I + K G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
A +LL + E G P Y II + +A FFSE+ +G PP+ Y++
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
++ GR EA + +M E + P F ++ DGL C K ++E
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGL--CKKRMISE 168
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ G N G + A + +M+++ P+ TF LI+ +CK
Sbjct: 106 MVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRM 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ + G DV TY L+ +DEA +L + + G P Y
Sbjct: 166 ISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNI 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A +E+ K P+ Y+TL+ + GR EA L EM G
Sbjct: 226 LINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG 285
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + +V DGL C L E E L+
Sbjct: 286 LLPNLITYSIVLDGL--CKHGHLDEAFELLK 314
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS K P + L++G G + A++++ +M G P+L T++ +++ +CK G
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ ++ + ++ Y ILI + G ++ A L NL G P Y
Sbjct: 306 LDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTV 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G ++A F E+ + G PN Y +I R G A + EM G
Sbjct: 366 MISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKG 425
Query: 181 LTPISRCFDLVTD 193
+ S F +++D
Sbjct: 426 FSADSSTFRMLSD 438
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P +L+ GL + A + M ++G +PD+ T+N+L++ C +
Sbjct: 141 MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQ 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G +V +Y ILI K+G IDEA LL + P Y+
Sbjct: 201 MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYST 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + G+ +A E+ G PN Y+ ++ + G EA L M E
Sbjct: 261 LMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESK 320
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ +G+ GK + A ++
Sbjct: 321 IEPNIFIYTILIEGMCTFGKLEAAREL 347
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V +++ GLL G A ++ +M G P+ T+N +I+ ++G+
Sbjct: 354 KGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPN 413
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
V + + G AD ST+++L S +I + R
Sbjct: 414 AVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQFMR 451
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 108/207 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V+ ++++ G ++ A ++ +M + PD+ T++SLI+ +CKSG
Sbjct: 464 MSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGR 523
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +E+ + G D+ TY ++ A+ K +D+A LL L G P + Y
Sbjct: 524 ISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTI 583
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG + G+ +DA F ++ +KG+ + YT +I G F EA L +M E G
Sbjct: 584 LVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ ++++ L ++D+AEK+
Sbjct: 644 CIPDAKTYEIIILSLFEKDENDMAEKL 670
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K P V +LV G G ++ AK ++ M+KQ PD+ T++SL++ C E
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ G A+V +Y I+I K M+DEA +L + P Y+
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A E+ +G P+ Y +++ + +A L ++ G
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ GL GK + A K+
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKV 600
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 14/224 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + ++ L +++ A ++ K+ QG PD+ T+ L++ +C+SG+
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G DV Y ++I G+ DEA LL + E+G P Y
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG---HPPNRPVYTTLI--TMCGRGGRFVEAANYLME 175
II F + + D A E+ ++G + V + L+ T C R +V + L+
Sbjct: 654 IILSLFEKDENDMAEKLLREMIMRGLLVALTDDLVASILVRRTWCARLALWVTFISLLLR 713
Query: 176 MTEMGLTPISRCFDLVTDG--LKNCGKHDLAEKIE--QLEVSLR 215
+ E L P FD+ +G + G+ L K+ L+V+LR
Sbjct: 714 VIE--LKP---GFDISDEGKAVVAAGQERLDSKVRCSGLDVALR 752
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
K++K G +PD T + I+ C G++ + + V +G D +Y LI + K G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 95 MIDEAFRLLHNLVEDGH--NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
A LL DG P +Y II G + +DAF +SE K P+
Sbjct: 313 ETKAALELLRR--NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFT 370
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
Y LI+ G+ +A + +MT + P F ++ DG
Sbjct: 371 YNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGF 413
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P ++G G + A +K+I G D ++ +LI +CK GE +
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ DV Y +I + K +++AF L V P Y +I G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ DA F+++ K P+ ++ L+ + G EA N L M + + P
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + DG + + AE I
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESI 460
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P V + ++ G+ ++ A + ++ + + PD+ T+N+LI C G+++
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++ + DV T+ IL+ K G I EA +L +++ P Y+ ++
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + A F+ + +G N Y +I + EA EM + P
Sbjct: 447 GYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP 506
Query: 184 ISRCFDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 507 DVITYSSLIDGLCKSGR 523
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 84/203 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+ L+ GL G ++A +++ + + PD+ +N++I+ +CK V
Sbjct: 293 GFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDA 352
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y DV TY LI G + +A L + + P ++ ++ G
Sbjct: 353 FDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDG 412
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G +A + + + P+ Y++L+ +A + M+ G+T
Sbjct: 413 FCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTAN 472
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++++ +G D A K+
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKL 495
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM--IKQGSDPDLETFNSLIETICKS 58
M+ G P + L+++GL G +E+A ++V++M I+ G PD+ TFNS+++ +CK
Sbjct: 162 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKE 221
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
+ ++ + G +V TY LI +SK +DEA +LL +VE G Y
Sbjct: 222 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ ++ G + G+ +DA +++ G P+ Y TLI + R EA L EM E
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + + GL G+ D A +I
Sbjct: 342 AGFHPSVVTYTTLCHGLCRSGRFDEAVEI 370
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF+P V L GL +G + A ++++ M +G P+ T++S+++ +CK+G
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V + + + + A V Y LI + KAG IDEA+ L ++ G P ++
Sbjct: 399 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFS 458
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G G+ D F + +G P+ Y TL+ R R EA + +M
Sbjct: 459 ILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSD 518
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
GL+P + GL + + A++I+ E S
Sbjct: 519 GLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEENS 552
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++G P V L+ GL ++ A Q++ KM++ G + T++++++ + K G +E
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V + + G D TY LI K + EA LL ++E G +P Y +
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EMGL 181
G R G+FD+A + +G PN Y++++ + GR EA Y +M + +
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 415
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + + DGL GK D E E LE +R+
Sbjct: 416 APHVIAYSALIDGLCKAGKID--EAYEFLERMIRA 448
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V + ++ GL + A + + +++G P++ T+++LI+ + K +
Sbjct: 199 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + +LG A+ TY ++ + K G +++A +L + + G P Y
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+R + +A E+ G P+ YTTL R GRF EA L M G
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + DGL G+
Sbjct: 379 CAPNAITYSSIVDGLCKAGR 398
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM-IKQGSDPDLETFNSLIETICKSGEVE 62
KG +P V + ++ GL G +E+A + + M I G P + T+++LI+ +C+ EV+
Sbjct: 59 KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVD 118
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + G + TY L+ A+ G EAF LL + +G P + II
Sbjct: 119 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178
Query: 123 KGAFRRGQFDDAFCFFSEIKI--KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
KG + G+ + AF E+ + G P+ + +++ + R ++A N E G
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + DGL K D A ++
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQL 265
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 7/200 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DK P V L+ GL ++ A + + +G P + T+N++I+ +CK G
Sbjct: 21 MVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGR 80
Query: 61 VEFCVEMYYSVC-KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E + +Y + G V TY LI + + +D+ +LL + G P Y
Sbjct: 81 IENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYN 140
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME--- 175
++ +G+ +AF ++ G PP + +I +C G +EAA +++
Sbjct: 141 TLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE--IEAAFRVVDEMF 198
Query: 176 MTEMGLTPISRCFDLVTDGL 195
M E GL+P F+ V DGL
Sbjct: 199 MIESGLSPDVITFNSVLDGL 218
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL + ++ A + +M+ + PD+ T+ +LI+ + K V+ +++ G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
V TY +I + K G I+ A L ++ + G P Y+ +I G R + D
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ +G PN Y TL+ GR EA + L +M G P F L+ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 195 LKNCGKHDLAEKI 207
L G+ + A ++
Sbjct: 181 LCKEGEIEAAFRV 193
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL + +E A Q++++MI +G PD T+ ++++ C+ G+++ ++ ++ G
Sbjct: 518 LINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNG 577
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY LI + KAG +D A +LL ++ G P Y P+I+ +R + +A
Sbjct: 578 CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAM 637
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ KG PP+ Y + +C GG EA ++ +EM E G+ P F + +G
Sbjct: 638 RLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEG 697
Query: 195 LKNCGKHD 202
L + D
Sbjct: 698 LCSLSMED 705
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++GF P + LV GL G+++ +M++ M+++G + D+ T+NSLI +CK GE++
Sbjct: 295 EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEID 354
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
VE+ + + + TY LI + K ++ A L L G P + +I
Sbjct: 355 EAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLI 414
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+G + A F E+K KG P+ Y+ LI R EA L EM G
Sbjct: 415 QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCA 474
Query: 183 PISRCFDLVTDGLKNCGK----HDLAEKIEQLEVSLRSV 217
++ + DGL + D+ +++E L VS SV
Sbjct: 475 RNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV 513
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF V + L+ GL G ++ A ++++ M+ + +P+ T+N+LI T+CK
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENH 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + G DV T+ LI + + A L + E G +P Y+
Sbjct: 388 VEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSI 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + +A E+++ G N VY TLI + R +A + +M +G
Sbjct: 448 LIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLG 507
Query: 181 LTPISRCFDLVTDGL 195
++ S ++ + +GL
Sbjct: 508 VSRSSVTYNTLINGL 522
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + L+ L ++E+A ++ + +G PD+ TFNSLI+ +C +
Sbjct: 363 MVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSN 422
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E++ + + G D TY ILI ++ + EA LL + G +Y
Sbjct: 423 REIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNT 482
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DA F ++++ G + Y TLI + R EAA + +M G
Sbjct: 483 LIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG 542
Query: 181 LTP 183
L P
Sbjct: 543 LKP 545
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P V + L+QGL E A ++ +M ++G DPD T++ LIE++C
Sbjct: 398 LTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERR 457
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + M +L CA +V Y LI + K + +A + + G + Y
Sbjct: 458 LKEAL-MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYN 516
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + ++A ++ ++G P++ YTT++ + G AA+ + MT
Sbjct: 517 TLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLN 576
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
G P + + GL G+ D+A K+ LRSV
Sbjct: 577 GCEPDIVTYGTLIGGLCKAGRVDVASKL------LRSV 608
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+QG + +E A ++ M++ G + + N L+ +CK G
Sbjct: 225 MPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGR 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + Y + G C D T+ L+ + + G I + ++ ++E G Y
Sbjct: 285 IEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNS 342
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLME-MTE 178
+I G + G+ D+A + + PN Y TLI T+C VEAA L +T
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKEN--HVEAATELARVLTS 400
Query: 179 MGLTPISRCFDLVTDGL 195
G+ P F+ + GL
Sbjct: 401 KGVLPDVCTFNSLIQGL 417
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P +L++ L + L+ A ++ +M G ++ +N+LI+ +CK+
Sbjct: 433 MKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNR 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + LG TY LI + K+ ++EA +L+ ++ +G P Y
Sbjct: 493 VGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTT 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL--MEMTE 178
++K ++G A + + G P+ Y TLI + GR A+ L ++M
Sbjct: 553 MLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKG 612
Query: 179 MGLTP 183
M LTP
Sbjct: 613 MVLTP 617
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D P R ++ + L+ A L+ + + +KM+ PD+ TFN LI +CK+ ++
Sbjct: 157 DFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLR 216
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ M + G D T+ L+ + ++ A R+ +VE G ++
Sbjct: 217 PAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLV 276
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ ++A F E +G P++ + L+ R G + + M E G
Sbjct: 277 NGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFE 334
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + GL G+ D A +I VS
Sbjct: 335 LDVYTYNSLISGLCKLGEIDEAVEILHHMVS 365
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + L+ GL AG ++ A +++ + +G + +N +I+ +CK
Sbjct: 573 MTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAV-SKAGMIDEAFRLLHNLVEDGHNP-FPS 116
+ + ++ + + G DV TYKI+ + + G I EA ++E G P FPS
Sbjct: 633 TKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPS 690
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G +P V +L+ GL ++ A +++N+MI G P++ T+ SL+ +CK G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V+++ + G D Y +LI SK G + EA+RL ++E G P Y
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R+G+F F ++ +G PN + L+ + G VEA +EM +G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + G+ + GK A+++
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRL 284
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+N + L++ L +G + N M+ G P+ T+ L+ ++C++ E
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + G +V +Y ILI + + +DEA LL+ +++ GH P Y ++ G
Sbjct: 73 SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G+ +A FS + +G PP+ VY LI + G EA EM E G P
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 186 RCFDLVTDGLKNCGK 200
++ + G G+
Sbjct: 193 FTYNSLLSGFSRKGE 207
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 98/205 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L++G+ + G A++++ +MI+ G PD+ ++N LI+ KSG
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++Y + K G D +Y +I + +AG + AF + +++ +G P ++ P
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + ++ F + P P Y L+ + R + E+TE G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+P ++ + L+ D AE
Sbjct: 433 FSPDVEISKVILETLRRSDDKDAAE 457
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + L+ G G + + M++QG P++ TFN+L++ CK G+
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + LG DV +Y LI + G EA RLL ++ G P Y
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D A F EI G P+ Y+T+I R G+ A +M G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P + + GL C L E E + ++
Sbjct: 363 SAPDAAVVIPLVIGL--CRGERLTESCELFQAMVK 395
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ G G + A ++ +M G PD+ ++N+LI +C G+
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGK 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D+ +Y ILI SK+G +D A +L + + + G P Y+
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II R G+ AF F ++ G P+ V L+ RG R E+ M +
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
P+ ++L+ L + D
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSD 419
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 3/217 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L++ L A E A+ + M QG P++ +++ LI +C+ +
Sbjct: 43 MLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + G +V TY L+ + K G + EA L +V G P +Y
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A+ F E+ KG P Y +L++ R G F + +M G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P F+ + DG C D+ E +L + +RS+
Sbjct: 223 CVPNIFTFNNLLDGF--CKMGDMVEA-HRLFLEMRSL 256
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G G + A ++ +M+++G P + T+NSL+ + GE ++ + +
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ T+ L+ K G + EA RL + G P Y +I+G +G+ +
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+ G P+ Y LI + G A E+ + GL P + + + D
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 194 GLKNCGK 200
L GK
Sbjct: 341 CLCRAGK 347
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+GF+P +L+ GL G + A+Q++ M +G +PD+ T+N+L+ +C G+
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP----- 115
+E +++ S+ G +V +Y ILI K IDEAFR + G P
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300
Query: 116 ------------------------------SLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
S Y ++ G + G ++A F IK
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
H PN V++ L+ R G+ EA E+++ GL P + ++++ +GL C K L+E
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL--CNKGMLSE 1418
Query: 206 KIEQL 210
++ L
Sbjct: 1419 AVKLL 1423
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D+G V ++L+ G ++ A + +M +G P T+N+LI +C+SG
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR 1310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + G +STY +L+ + K G ++EA L ++ + H P +++
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI 1370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ ++A+ F EI G P+ Y LI G EA L +M E G
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P S F+++ L ++++ E I+ LE
Sbjct: 1431 CLPDSITFNVIIQNL--LKENEIHEAIQLLE 1459
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P LV+G+ + A Q+ ++M K+G D +T+ LI +CK+ +
Sbjct: 1010 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGL 1069
Query: 64 CVEMYYSVCKLGSC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++++ + G+C DV TY ++I A+ K GM EA + ++ G P +Y+ ++
Sbjct: 1070 AIKLHEKM--KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R G+ +A FF E++ +G + Y +LI R G + E +L M + G +
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + F ++ DGL GK A++I +L
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILEL 1215
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 4/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + V + L+ GL AG + +N M+ +G PD TF LI+ +CK G+
Sbjct: 1146 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 1205
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G D+ TY L+ + G +++A +L +L + G Y
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+AF FF E++ KG P+ Y TLI + GR A +EM G
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQLE 211
+ ++ DGL G DL + I++ E
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ L +G + +A+++ +M G L T+ L++ +CK+G
Sbjct: 1286 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH 1345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ S+ K ++ + IL+ + +AG ++EA++ + ++G P Y
Sbjct: 1346 LEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 1405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G +A +++ KG P+ + +I + EA L EM
Sbjct: 1406 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 1465
Query: 181 LTP 183
+P
Sbjct: 1466 FSP 1468
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ L G A M ++MI G PD+ ++SL++ +C+ G ++ +E + +
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 1149
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G ADV TY LI +S+AG+ E L+ +V+ G +P + +I G + G+ +A
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
++ KG P+ Y TL+ G+ +A + + G+ ++++ +G
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL G+LE A + + K P++E F+ L++ +C++G++E + + + K
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 1394
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D Y ILI + GM+ EA +LL + E G P + II+ + + +A
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 1454
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL--TPISR 186
E++ + P+ V + L+ + ++ A L + G+ P+ R
Sbjct: 1455 IQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGVGSVPVKR 1508
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG + +L+ GL A A ++ KM K D+ T+ +I+ +CK G
Sbjct: 1042 MTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGM 1100
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++M+ + G DV Y L+ + + G + EA + G + Y
Sbjct: 1101 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 1160
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G + + F + + +G P+ +T LI + G+ EA L M G
Sbjct: 1161 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKG 1220
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + +GL G+ + A K+
Sbjct: 1221 KEPDILTYNTLMNGLCLVGQLEDATKL 1247
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G P ++L+ GL N G L A +++ +M ++G PD TFN +I+ + K E
Sbjct: 1391 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 1450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+ +++ + D + +L+ S A L N ++ G P
Sbjct: 1451 IHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGVGSVP 1505
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 45/116 (38%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P +TFN L+ ++ K G MY + +G D+ T ILI + F +
Sbjct: 944 PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
++ G P ++KG + DA F E+ KG + Y LI
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILIN 1059
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G +P V +L+ GL ++ A +++N+MI G P++ T+ SL+ +CK G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V+++ + G D Y +LI SK G + EA+RL ++E G P Y
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R+G+F F ++ +G PN + L+ + G VEA +EM +G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + G+ + GK A+++
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRL 284
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+N + L++ L +G + N M+ G P+ T+ L+ ++C++ E
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + G +V +Y ILI + + +DEA LL+ +++ GH P Y ++ G
Sbjct: 73 SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G+ +A FS + +G PP+ VY LI + G EA EM E G P
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 186 RCFDLVTDGLKNCGK 200
++ + G G+
Sbjct: 193 FTYNSLLSGFSRKGE 207
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + L+ G G + + M++QG P++ TFN+L++ CK G+
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + LG DV +Y L+ + G EA RLL ++ G P Y
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D A F EI G P+ Y+T+I R G+ A +M G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P + + GL C L E E + ++
Sbjct: 363 SAPDAAVVIPLVIGL--CRGERLTESCELFQAMVK 395
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L++G+ + G A++++ +MI+ G PD+ ++N LI+ KSG
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++Y + K G D +Y +I + +AG + AF + +++ +G P ++ P
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + ++ F + P P Y L+ + R + E+TE G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+P ++ + L+ + AE
Sbjct: 433 FSPDVEISKVILETLRRSDDKEAAE 457
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V L+ GL G L+ A + ++M+ +G PD +N LI+ K G+
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G V TY L+ S+ G L +++ G P +
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
++ G + G +A F E++ G PP+ Y TL+ MC + G+ EA L EM
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSK-GKPHEAQRLLREMIRS 291
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ P ++++ DG G D A K+
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKL 319
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 3/217 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L++ L A E A+ + M QG P++ +++ LI +C+ +
Sbjct: 43 MLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + G +V TY L+ + K G + EA L +V G P +Y
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A+ F E+ KG P Y +L++ R G F + +M G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P F+ + DG C D+ E +L + +RS+
Sbjct: 223 CVPNIFTFNNLLDGF--CKMGDMVEA-HRLFLEMRSL 256
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ G G + A ++ +M G PD+ ++N+L+ +C G+
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGK 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D+ +Y ILI SK+G +D A +L + + + G P Y+
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II R G+ AF F ++ G P+ V L+ RG R E+ M +
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
P+ ++L+ L + D
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSD 419
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G G + A ++ +M+++G P + T+NSL+ + GE ++ + +
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ T+ L+ K G + EA RL + G P Y +++G +G+ +
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+ G P+ Y LI + G A E+ + GL P + + + D
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 194 GLKNCGK 200
L GK
Sbjct: 341 CLCRAGK 347
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 6/215 (2%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+D+ P V ++ GL AG L+ A+++ ++M ++G P + T+N+LI+ CK G V
Sbjct: 277 NDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNV 336
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E V ++ + + G +V TY +LI + AG ID A +LL + +G P Y +
Sbjct: 337 EDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVL 396
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHP--PNRPVYTTLIT---MCGRGGRFVEAANYLMEM 176
I F G + A F E KG PN+ Y +I+ + R AA ++EM
Sbjct: 397 IGYLFEEGDIEKALHLF-ETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEM 455
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ G P F+ V +GL G +L+ ++ +++
Sbjct: 456 VDRGYLPRRFMFNRVLNGLMLTGNQELSRELLRMQ 490
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++ F P + L G A ++ +M++ G P T+N +++ +SG+++
Sbjct: 203 ERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQ 262
Query: 63 FCVEMYYSVCKLGS----CA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ + + K GS C DV +Y ++ + AG +D+A ++ + +G P +
Sbjct: 263 HAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIAT 322
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I+ ++G +DA F ++ KG+ PN YT LI G+ A L +M
Sbjct: 323 YNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMK 382
Query: 178 EMGLTPISRCFDLV 191
G P + ++++
Sbjct: 383 REGCEPNVQTYNVL 396
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G DL FNSL++ + KS + ++ + D TY L +
Sbjct: 170 HGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERRFP-PDAVTYNTLADGWCRVKDTSR 228
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-----PPNRPVY 153
A +L +VE G P + Y I+KG FR GQ A+ FF ++K +G P+ Y
Sbjct: 229 ALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSY 288
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
TT++ G G+ +A EM+ G TP
Sbjct: 289 TTVLHGLGVAGQLDKARKVFDEMSREGCTP 318
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +++++G + GY++ A + ++M+K G P++ T+N +I K G + + +
Sbjct: 410 PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRL 469
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D TY LI S+ G ++ AF L + +VE G +P Y II G
Sbjct: 470 LEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLT 529
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ DDA F ++ G+ P+ Y +I+ + R EA N+ +M + GL P
Sbjct: 530 VAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVIT 589
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ DGL G+ LA KI
Sbjct: 590 YTSFIDGLCKNGRTSLAFKI 609
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M+ G P+L TFN++I+ +C G+V+ + + G+C D TY LI K G
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D AF + +V+DG +P Y+ +I G G+ ++A E+ KG P YT
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
I GR EA L +M + G P + + + GL GK ++A
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVA 361
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + +++ L N G ++ A+ ++ + G+ PD T+ SLI CK+G
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ EM+ + K G + TY LI + G ++EA +L +++ G P Y
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G+ +A ++K +G PN YT LI+ R G+F A +M G
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
L P + + + + L G+ + A I + +S S+
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSL 409
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G L+ A +M ++M+K G DP+ T+++LI +C G +E ++M + G
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG 302
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V Y I I ++ AG EA +LL + + G P Y +I G R G+F+ A
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAI 362
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P Y+ LI GRF A M P + ++++ G
Sbjct: 363 GVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGF 422
Query: 196 KNCG 199
+ G
Sbjct: 423 CSIG 426
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V + + L +AG A +++ KM K+G P+++T+ +LI + + G+
Sbjct: 298 MIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGK 357
Query: 61 VEFCVEMYYSVCKLG-----------------------------------SCADVSTYKI 85
E + +Y+ + G S + TY +
Sbjct: 358 FEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNV 417
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I G I +A + +++ G +P Y II F++G ++A +K G
Sbjct: 418 IIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNG 477
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ Y LI+ RGG+ A + EM E G++P ++ + +G K D A
Sbjct: 478 LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDA 536
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P L+ GL + G LE A M+ +MI +G +P + + I ++C +G
Sbjct: 263 MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGR 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V++ + K G +V TY LI +S+ G + A + H ++ DG P Y+
Sbjct: 323 SCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSA 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+F+ A F + PN Y +I G +A +M + G
Sbjct: 383 LINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG 442
Query: 181 LTPISRCFDLV 191
+P ++++
Sbjct: 443 PSPNVITYNII 453
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V + ++ G L ++ A + KM++ G+ P T+N +I K+
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ FC +M K G +V TY I + K G AF++ H + + + P
Sbjct: 568 ISEAENFCGKM----VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLC 623
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME 175
Y+ +I G + GQ +DA + G PN YTTL+ +CG+ GR EA +
Sbjct: 624 TYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGK-GRCYEADQLVES 678
Query: 176 MTEMGLTP 183
M + GL P
Sbjct: 679 MKKKGLQP 686
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G LE A + N+M++ G P++ T+N++I +V+ + +++ + + G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ++I SK I EA +V+ G P Y I G + G+ AF
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+K + + PN Y++LI + G+ +A L + G P + + GL
Sbjct: 608 KIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGL 663
Query: 196 KNCGK 200
CGK
Sbjct: 664 --CGK 666
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V ++++ GY+ +A +++ M G D T+ +LI + G+
Sbjct: 438 MLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGK 497
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G +V TY +I +D+A L +VE G+ P Y
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNM 557
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A F ++ +G PN YT+ I + GR A EM +
Sbjct: 558 MISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + DGL G+ + AE++
Sbjct: 618 YFPNLCTYSSLIDGLCQEGQAEDAERL 644
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++++ G + A+ KM+KQG P++ T+ S I+ +CK+G
Sbjct: 543 MVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGR 602
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++++ + K ++ TY LI + + G ++A RLL +DG P Y
Sbjct: 603 TSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTT 658
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G +G+ +A +K KG P+ +Y L+ + A M G
Sbjct: 659 LVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTG 718
Query: 181 LTP 183
P
Sbjct: 719 FQP 721
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P V LV+GL G A Q+V M K+G P E + +L+ CK+ EVE
Sbjct: 646 DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVE 705
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++++ S+ G +S YK LI A+ KA +A + +++ N ++ ++
Sbjct: 706 SALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLL 765
Query: 123 KGAFRRGQFD 132
G + G+ D
Sbjct: 766 DGLLKEGETD 775
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGE 60
D+ F P R L+++ N G ++ Q++++ I D L +F++L+ + K
Sbjct: 124 DRLFVPADNVRILMIKSCRNEGEVKRVIQVLSE-INTTYDFGYTLYSFSTLLIQLGKFDM 182
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++Y + G ++ T+ +I + G + EA ++ ++ G P Y
Sbjct: 183 DGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTS 242
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF F + G PN Y+ LI GR EA + L EM + G
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG 302
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + L + G+ A K+
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKL 329
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + + P + L+ GL G E A+++++ G +P+++T+ +L+ +C G
Sbjct: 613 MKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGR 668
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ S+ K G Y+ L+ K ++ A ++ ++V G P S Y
Sbjct: 669 CYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKA 728
Query: 121 II----KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I K FR+ A C F + K + V+T L+
Sbjct: 729 LICALCKANFRQ----KAQCMFQTMLKKHWNSDEVVWTVLL 765
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G +ESA ++ + M+ G P L + +LI +CK+
Sbjct: 679 MKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANF 738
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+ M+ ++ K +D + +L+ + K G D + LLH
Sbjct: 739 RQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLH 782
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 11/216 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+ GL AG +E+A+ +++ M G P++ T+N+L+ +CKSG
Sbjct: 593 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR 652
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D TY L+ A+ +A D+A +L+ L G +P Y
Sbjct: 653 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI 712
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++ GQ + A E+ KGH P+ Y TLI + G EA +M+
Sbjct: 713 LVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS--- 769
Query: 181 LTPISRC-------FDLVTDGLKNCGKHDLAEKIEQ 209
+ +SRC + ++ +GL G+ D A ++ Q
Sbjct: 770 -SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ 804
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G AG E A + +M+ + PD+ TF +LI+ +CK+G+VE ++ +
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG +V TY L+ + K+G I+EA + L +V G P Y ++ R + DD
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A SE+K G P+ Y L+ + G+ +A L EM G P ++ + D
Sbjct: 691 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750
Query: 194 GLKNCGKHDLAE 205
L C DL E
Sbjct: 751 SL--CKAGDLEE 760
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G ++ A + + MI G P++ T+N+L+ +CK+ ++E M S+ G
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +L+ A KA +DEA LLH + G P + II G + + +AF
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485
Query: 136 CFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F ++ +K G P++ Y TLI R GR +A L M + P + F+ +G
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCING 541
Query: 195 LKNCG 199
L G
Sbjct: 542 LSKLG 546
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G + A + + MI G P++ T+N L+ +CK+ ++E M S+ G
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKG 919
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +L+ A KA +DEA LLH + G P + II G + Q +AF
Sbjct: 920 VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAF 979
Query: 136 CFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F ++ +K G P++ Y TLI R G +A L M + P + F+ +G
Sbjct: 980 QMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCING 1035
Query: 195 LKNCG 199
L G
Sbjct: 1036 LSKLG 1040
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G++P ++LV GL +G E A ++ +M+ +G PD+ T+N+LI+++CK+G++E
Sbjct: 702 GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEA 761
Query: 65 VEMYYSVC-KLGSCA--DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YA 119
++ + ++ C +V TY +LI + K G IDEA L+ ++ + P++ Y
Sbjct: 762 RRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYN 821
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+ G ++ +A ++ P+ ++TLI + G+ EA N +M
Sbjct: 822 SFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMI 881
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++++ +GL K + A +
Sbjct: 882 AGGYVPNVVTYNVLMNGLCKTDKMERAHAM 911
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 41/250 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + + ++ GL + L + ++ +++++G PD+ T+N+LI+++CK+G+
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--- 117
+E ++ + +V TY +LI + K G IDEA L+ + + P++
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326
Query: 118 ------------------------------------YAPIIKGAFRRGQFDDAFCFFSEI 141
++ +I G + GQ D+A F ++
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 386
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
G+ PN Y L+ + + A + M + G+TP + ++ D C
Sbjct: 387 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF--CKAS 444
Query: 202 DLAEKIEQLE 211
+ E +E L
Sbjct: 445 RVDEALELLH 454
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + + GL G + A Q+ N+M++ PD TFN LI CK+G E
Sbjct: 529 DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASA 588
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + DV T+ LI + KAG ++ A +L + G P Y ++ G
Sbjct: 589 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 648
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A F E+ G P+ Y +L+ R R +A + E+ G P +
Sbjct: 649 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 708
Query: 187 CFDLVTDGLKNCGKHDLA 204
++++ DGL G+ + A
Sbjct: 709 TYNILVDGLWKSGQTEQA 726
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 32/238 (13%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V + LV GL A +E A M+ M+ +G PD+ T++ L++ CK+ V+
Sbjct: 390 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 449
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIK 123
+E+ + + G +V T+ +I + K+ EAF++ ++ ++ G P Y +I
Sbjct: 450 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLID 509
Query: 124 GAFRRGQFDDAFCFFSEIK----------IKGHP---------------------PNRPV 152
G FR G+ A + I G P++
Sbjct: 510 GLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT 569
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ LI + G F +A+ EM L P F + DGL G+ + A I L
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 627
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVN-KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
++++Q L AG A ++ +M + G P + T+N++I +CKS E+ +E++ +
Sbjct: 184 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 243
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G DV TY LI ++ KAG ++EA RL ++ P Y+ +I G + G+ D
Sbjct: 244 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRID 303
Query: 133 DAFCFFSEIKIKGHP--PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL--TPISRCF 188
+A E+ K PN Y + + + EA + + + L +P + F
Sbjct: 304 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 363
Query: 189 DLVTDGLKNCGKHDLA 204
+ DGL CG+ D A
Sbjct: 364 STLIDGLCKCGQIDEA 379
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V ++L+ GL +E A M+ M+ +G PD+ T++ L++ CK+ V+
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEA 943
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIK 123
+E+ + + G +V T+ +I + K+ EAF++ ++ ++ G P Y +I
Sbjct: 944 LELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLID 1003
Query: 124 GAFRRGQFD------------DAFCF---------FSEIKIKGHP-------PNRPVYTT 155
G FR G D + F ++ H P++ +
Sbjct: 1004 GLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNI 1063
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
LI + G F +A+ EM L P F + DGL G+
Sbjct: 1064 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLH-NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
V+ Y I++ ++ +AG A + + DG P Y II G + + F
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
E+ +GH P+ Y TLI + G EA +M+ P + ++ +GL
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 199 GKHDLAEKIEQ 209
G+ D A ++ Q
Sbjct: 300 GRIDEARELIQ 310
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G+ A+ +++ M DPD FN I + K G+V + + +L
Sbjct: 1001 LIDGLFRTGWAGQAEVLLDAM----PDPDTYAFNCCINGLSKLGDVS---RALHRMLELE 1053
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D T+ ILI KAG ++A L +V P + +I G + GQ + +
Sbjct: 1054 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATW 1113
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++L+ G AG E A + +M+ + PD+ TF +LI+ +CK+G+VE
Sbjct: 1062 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + + GL G + A +++M++ PD TFN LI CK+G E
Sbjct: 1023 DPDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQASA 1079
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
++ + DV T+ LI + KAG ++ + ++
Sbjct: 1080 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ P V ++L+ GL A + A +M+++M+ +G PD TFNS+++ +CK+G+
Sbjct: 252 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 311
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + TY LI + K +D A L+ V G P Y+
Sbjct: 312 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSI 371
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G +RG+ D+AF E+ KG PN Y TLI + + +A L + G
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ DGL G+ D A K+
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKM 458
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V +L GL G ++ A ++V +M +G P+L T+N+LI+ +CK+ + E
Sbjct: 361 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKA 420
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ S+ G DV TY I++ + K G +D+A +++ +++ G P Y +++G
Sbjct: 421 YELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 480
Query: 125 AFRRGQFDDAFCFFSEI---------------------------------KIKGHPPNRP 151
R G+ D+A F E+ I+G P
Sbjct: 481 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG-TPYID 539
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
VY L+ + GR E N +M G P + +++V DGL GK D A
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 592
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + ++ GL AG E A ++ M ++ P T+N+LI +CK
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ G DV TY IL + K G IDEAF L+ + G P Y
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + + A+ + G P+ YT ++ + GR +A + M + G
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
TP + + +GL G+ D A I + VS
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 4/205 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+GF R+ +Q LL G + M +M+ G PD T++ +I+++C+ +++
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
M G +VS Y IL A K G + +A + N+ +P Y II
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI----PSPDAIAYNAII 233
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R+ D A F E+ + P+ Y LI + + +A+ L EM + G+T
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + DGL GK + A +
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSL 318
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ P + L+ GL ++ AK +V++ + G PD+ T++ L + +CK G
Sbjct: 322 MAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGR 381
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G ++ TY LI + KA ++A+ LL +LV G P Y
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTI 441
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G+ D A + +G P+ YT L+ R GR EA + EM
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 501
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
T + + + +G + A+K+
Sbjct: 502 CTADALAYVSLVNGYCKSSRTKEAQKV 528
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++++ GL A + A+Q++++MI+ G PD T+N+L+ CK
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP-SLYA 119
+ V + ++ K G D TY LI +S+ + +A+ L+H ++ +G + Y
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
II + G A + G N Y I + GR EA++ L EM
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + ++ G + A + + +M ++ PD+ T+N LI+ +CK+ + + E
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASE 282
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
M + + G D T+ ++ + KAG + A LL + E P Y +I G
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
++ D A E G P+ Y+ L + GR EA + EM+ G TP
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + DGL K + A ++ + VS
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVS 429
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV G + + A+++V+ + +G+ P ++ +N+L++ CK G ++ ++ + G
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGI--RGT-PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY I++ + K G +DEAF L ++ G P Y II G F+ + +A
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PP+ Y TL+ + RF +A L M + G+ P + ++ + GL
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688
Query: 196 KNCGKHDLAEKIEQLEVSLRS 216
+ L + E + LR+
Sbjct: 689 SQTNR--LGDAYELMHEMLRN 707
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P + + L+ G G L+ + M +G P+++T+N +++ +CK G+V+
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
S+ G DV +Y I+I + KA EA ++L +++ G P Y ++
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 654
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ +FDDA + G P+ Y TLI+ + R +A + EM G +S
Sbjct: 655 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV-VSA 713
Query: 187 C--FDLVTDGL 195
C ++ + D L
Sbjct: 714 CTTYNTIIDRL 724
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G ++ + L G L+ A ++++M + D ++ ++I +CK+ +
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQ 796
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ ++ + + G C T+ +LI A +K +DEA LL +V+ G +P Y
Sbjct: 797 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEM 176
+I + + D A+ F E+ ++G + YT LI +CG+ GR EA L EM
Sbjct: 857 MVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ-GRGKEALQVLEEM 913
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P ++ ++++ GL G ++ A + M G PD+ ++N +I+ + K+ +
Sbjct: 564 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G D TY L+ K D+A +L N+++ G +P Y
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNR-PVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + DA+ E+ G + Y T+I + G +A + MT
Sbjct: 684 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 743
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ + +++ D L G+ D A +
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSL 771
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 107/210 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G NP ++ ++L+ G ++ A + +M + PD+ T+NSLI+ +CK G+
Sbjct: 328 MSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGK 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D+ TY ++ A+ K +D+A LL L + G P Y
Sbjct: 388 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTI 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +DA F ++ +KG+ YT +I G F EA L +M +
Sbjct: 448 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNS 507
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + ++++ L + ++D AEK+ ++
Sbjct: 508 CIPDAVTYEIIIRSLFDKDENDKAEKLREM 537
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ G G L+ A + NKMI + PD+ TFN L++ CK G+
Sbjct: 223 MVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 282
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G +V TY L+ +++A +L+ + + G NP Y
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A F E+ K P+ Y +LI + G+ A + EM + G
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P + + D L C H + + I L
Sbjct: 403 VPPDIITYSSILDAL--CKNHQVDKAIALL 430
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G + AK ++ M ++G +PD++++N LI+ CK +
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKK 352
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + DV TY LI + K G I A +L+ + + G P Y+
Sbjct: 353 VDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 412
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + Q D A +++K +G PN YT LI +GGR +A N ++ G
Sbjct: 413 ILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 472
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ ++ G N G D A
Sbjct: 473 YNITVNTYTVMIHGFCNKGLFDEA 496
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++LV G G ++ K + M+KQG P++ T+ SL++ C EV +
Sbjct: 265 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSI 324
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
Y++ + G D+ +Y ILI K +DEA L + P Y +I G +
Sbjct: 325 LYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCK 384
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A E+ +G PP+ Y++++ + + +A L ++ + G+ P
Sbjct: 385 LGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYT 444
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ ++ DGL G+ + A I
Sbjct: 445 YTILIDGLCKGGRLEDAHNI 464
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G P+ TF +LI+ +C G++ + + +V +G D Y LI + K G A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
LL + + P +Y+ II G + +DAF +SE+ KG PN Y+ LI+
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
G+ +A + +M + P F+++ DG GK
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 282
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G++P L++GL G + A + ++ G D + +LI +CK GE
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ V +V Y +I + K +++AF L +V G +P Y+ +I G
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F GQ DA F+++ ++ P+ + L+ + G+ E M + G+ P
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301
Query: 185 SRCFDLVTDG 194
+ + DG
Sbjct: 302 VVTYCSLMDG 311
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 87/200 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF G L+ GL G +A ++ ++ P++ ++++I+ +CK V
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + G +V TY LI G + +A L + ++ + P + ++ G
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ + F+ + +G PN Y +L+ +A + L M++ G+ P
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ ++++ DG K D A
Sbjct: 337 IQSYNILIDGFCKIKKVDEA 356
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M +G P ++QG G L AK++V++MI +G PD+ FNS+I ++CK G
Sbjct: 501 MVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDG 560
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V +++ V +G DV T+ LI G +D+AF++L + G Y+
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYS 620
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G F+ G+ +D F E++ KG PN Y ++ R GR V A EM E
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Query: 180 GLTPISRCFDLVTDGL--KNCG 199
G T + ++ GL NC
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCA 702
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + ++ G G L+ A +M KM +G P++ NS + ++CK G
Sbjct: 326 MTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGR 385
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ S+ G D+ +Y L+ + G + L +++ +G ++
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNI 445
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG DDA F+E++ +G P+ Y+T+I+ R GR +A +M G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505
Query: 181 LTPISRCFDLVTDGL 195
+ P + + + G
Sbjct: 506 IQPNTAVYHSIIQGF 520
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + + L G + A ++ + M +G PD+ ++ +L+ G
Sbjct: 361 MKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGW 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ S+ G AD + ILI A +K GM+D+A + + + G +P Y+
Sbjct: 421 FADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I R G+ DA F+++ +G PN VY ++I C GG V+A + EM
Sbjct: 481 VISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG-LVKAKELVSEMINK 539
Query: 180 GL 181
G+
Sbjct: 540 GI 541
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKS 58
MS+ G P V ++++GL + + A + M K+G P++ +N++I K
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GE +++ + + G DV TY ++I A+ KA +D+A +L + +G P Y
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G G+ +A F ++K +G PN + + + + GR EAA MT
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398
Query: 179 MGLTP--ISRC 187
G P +S C
Sbjct: 399 KGHKPDIVSYC 409
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V +L++ L A ++ A+ ++ +M G+ PD T+N +I G
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+ + G ++ + ++ K G EA + ++ GH P Y
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G F D F+ +K G + V+ LI + G +A EM + G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
++P + V G+ D EK Q+
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQM 501
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 82/198 (41%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V + ++ G G A + ++M +QG PD+ T+N +I+ +CK+ ++
Sbjct: 262 SPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + G+ D TY +I + G + EA ++ + G P + +
Sbjct: 322 VLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLC 381
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ +A F + KGH P+ Y TL+ G F + M G+ R
Sbjct: 382 KHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCR 441
Query: 187 CFDLVTDGLKNCGKHDLA 204
F+++ G D A
Sbjct: 442 VFNILIHAYAKRGMVDDA 459
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V ++ G L A + N+M+ +G P+ ++S+I+ C G
Sbjct: 466 MQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG 525
Query: 61 VEFCVEMYYSVCKLG-SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ E+ + G D+ + +I ++ K G + +A + + + G P +
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFT 585
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G G+ D AF +++ G + Y+TL+ + GR + EM
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK 206
G+ P + + ++ GL G+ A K
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARK 672
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D G P V L+ G G ++ A ++++ M G + D+ T+++L++ K+G
Sbjct: 572 VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + G + TY I++ + +AG A + H ++E G S+Y
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G R D+A F ++ + + T+I + R EA ++ G
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG 751
Query: 181 LTPISRCFD-LVTDGLKNCGKHDLAEKIEQLEVS 213
L P + ++ + LK+ D +E S
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS 785
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +++ GL AG +A++ ++MI+ G+ + + ++ +C++
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNC 701
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + ++ +I A+ K +EA L + G P S Y
Sbjct: 702 ADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGV 761
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+I + G +DA FS ++ G P + +I M G +A NYL
Sbjct: 762 MIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 8/187 (4%)
Query: 29 AKQMVNKMIKQGSDP-----DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
A + N++ ++ + P + T++ L++ C++ + + ++ + + G T
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA 195
Query: 84 KILIPAVSKAGMIDEAFR-LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
L+ + A +EA LLH + E G P Y+ I+KG A F +
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255
Query: 143 IKGHP--PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+G PN Y T+I + G +A + EMT G+ P ++L+ D L
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 201 HDLAEKI 207
D AE +
Sbjct: 316 MDKAELV 322
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V + LV GL G + AK +V M+K+G PD+ T+N+L++ E
Sbjct: 250 MVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKE 309
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++G DV +Y ++I +SK M+DEA L + + P Y+
Sbjct: 310 AGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSS 369
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A + E+ +G PPN YT+LI + + +A L ++ + G
Sbjct: 370 LIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 429
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ ++++ DGL G+ A+K+ Q
Sbjct: 430 IQANMYTYNILVDGLCKDGRLTDAQKVFQ 458
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P V L+ GL +G + SA + V++M +G P++ T+ SLI+ +CKS +
Sbjct: 355 MRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQ 414
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G A++ TY IL+ + K G + +A ++ +L+ GHN Y+
Sbjct: 415 VDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSI 474
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + FD+A S+++ KG P+ Y T+I +A L EM +
Sbjct: 475 MINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID-- 532
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
C D +G C ++D
Sbjct: 533 ------CVDYKDNG-DTCDQYD 547
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G V +++ GL L+ A + M + PD+ ++SLI+ +CKSG
Sbjct: 320 MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +V TY LI A+ K+ +D+A LL + + G Y
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 439
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA F ++ +KGH + Y+ +I + F EA L +M + G
Sbjct: 440 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 499
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + + +D AEK+
Sbjct: 500 CVPDAIAYETIINAFFEKDMNDKAEKL 526
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + + SA + K++K G PD+ T+ +LI +C +G+V+ + + +
Sbjct: 88 NILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVS 147
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D +Y LI + K G A RLL + + P +Y II G + D
Sbjct: 148 QGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRD 207
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF + E+ K PN YT+LI G+ +A L EM + P F+ + D
Sbjct: 208 AFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVD 267
Query: 194 GLKNCGK 200
GL GK
Sbjct: 268 GLCKEGK 274
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 3/199 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G ++ + ++++ QG D ++ +LI +CK G+
Sbjct: 114 GYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPA 173
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + DV Y +I + K ++ +AF L + E P Y +I G
Sbjct: 174 LRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYG 233
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ D AF +E+ +K PN + TL+ + G+ EA + + M + G+ P
Sbjct: 234 FCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPD 293
Query: 185 SRCFDLVTDG---LKNCGK 200
++ + DG +K GK
Sbjct: 294 VFTYNALMDGYFLVKEAGK 312
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G A +++ K+ + PD+ +N++I+ +CK V ++Y + +
Sbjct: 160 LINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKR 219
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY LI G +D+AF LL+ +V NP + ++ G + G+ +A
Sbjct: 220 VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAK 279
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV-----EAANYLMEMTEMGLTPISRCFDL 190
+ + +G P+ Y L+ G F+ +A N M +MG+T + +
Sbjct: 280 SLVAVMMKEGVGPDVFTYNALM-----DGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSV 334
Query: 191 VTDGL 195
+ GL
Sbjct: 335 MISGL 339
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 71/170 (41%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A N+M++ P + F ++ ++ K+ + ++ + G ++ T I
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + I+ AF + +++ G+ P Y +I+G GQ ++ F + +G
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ Y TLI + G+ A L ++ P ++ + DGL
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGL 199
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V+ ++ GL AG +E A M +KM+K+G P+ T+N+LI +C G
Sbjct: 328 MGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGR 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++++ + G+ A+ TY +I + I++A + + +++DG +P Y
Sbjct: 388 FGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNT 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG ++A F +K P+ Y LI+ +GG+ A ++ EM + G
Sbjct: 448 LIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCG 507
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA----EKIEQ 209
++P + + DG GK D+A E++E+
Sbjct: 508 ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE 540
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ SA+ + ++ G P L TFN++I +CK G+V+ V ++ + + C D TY
Sbjct: 178 VTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTS 237
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + +D+AF + +V+DG NP Y+ +I G G+ +A E+ KG
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG 297
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P YT I+ GR +A N + M + G +P + + + GL GK +LA
Sbjct: 298 IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA 356
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL +E A + NKM+K G P + T+N+LI K G + Y + +
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI K G +D A + +++ G +P Y +I G + G+ D A
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ G + Y +I+ +G RF EA + +MTE GL P + + + +GL
Sbjct: 533 SLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592
Query: 196 KNCGKHDLAEKI 207
+LA KI
Sbjct: 593 CKNTATNLAFKI 604
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P R L+ G G L+SA +M+K G P+ T+ ++I+ CK G+
Sbjct: 468 MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGK 527
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G A + TY +I +SK EA + + E G P Y
Sbjct: 528 IDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTS 587
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I G + + AF F E++ K PN YT+LI +C G V+AA L TE
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK--VDAAERL---TEN 642
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + + GL G+ + A ++
Sbjct: 643 GCEPTIDTYSTLVSGLCREGRSNEASQL 670
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ L GYL +A + + M + +PD T+ LI CK G+
Sbjct: 433 MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGK 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y + K G + TY +I K G ID A L + E+G + Y
Sbjct: 493 LDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNA 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + +F +A F +++ +G PN YT+LI + A EM +
Sbjct: 553 IISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKN 612
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + + GL GK D AE++ +
Sbjct: 613 CLPNAHTYTSLIYGLCQEGKVDAAERLTE 641
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G L+ A ++ ++M+K G +P+ T+++LI +C G + ++M + + G
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG 297
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY + I ++ G +D+A L+ ++ + G +P Y II G FR G+ + A
Sbjct: 298 IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAI 357
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ +G PN Y LI GRF A M G ++ ++ + GL
Sbjct: 358 GMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGL 417
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + ++ L G ++ A + NK+ + PD T+ SLI C++ +++
Sbjct: 192 GVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKA 251
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ + K G + TY LI + G I EA +L + E G P Y I
Sbjct: 252 FEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISS 311
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ DDA + KG P+ YT +I+ R G+ A +M + GL P
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPN 371
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + + L G+ +A KI
Sbjct: 372 TVTYNALINELCTEGRFGIALKI 394
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP L+ GL N G + A M+ +M ++G +P + T+ I ++C G
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR 317
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPS 116
V+ + + S+ K G V TY +I + +AG ++ A + H ++++G P + +
Sbjct: 318 VDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNA 377
Query: 117 L-------------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L Y IIKG F + A F+++ G
Sbjct: 378 LINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDG 437
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P Y TLI + G A +L M E P R + + G GK D A
Sbjct: 438 PSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSA 496
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDP---DLETFNSLIETICK 57
+ DK P R L+++ N L+ ++ + S L +FN+L+ + K
Sbjct: 115 VKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGK 174
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
V +Y + G + T+ +I + K G + EA + + + + P
Sbjct: 175 FDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFT 234
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G R + D AF F + G PN Y+TLI GR EA + L EMT
Sbjct: 235 YTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMT 294
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLA 204
E G+ P + + L + G+ D A
Sbjct: 295 EKGIEPTVYTYTVPISSLCDIGRVDDA 321
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++ G P + LV GL G A Q+V M ++G P +E + SL+ CKS +
Sbjct: 639 LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLK 698
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ + G + YK+LI A+ +EA + +L++ N ++
Sbjct: 699 VDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTV 758
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV---EAANYLMEMT 177
++ G + G D F ++ + P+ Y L + G+ + + N L E++
Sbjct: 759 LVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLREVS 818
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P L+ GL G +++A+ ++ + G +P ++T+++L+ +C+ G
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSGLCREGR 663
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+EA +L+ N+ E G +P +Y
Sbjct: 664 S-----------------------------------NEASQLVENMKEKGLSPSMEIYCS 688
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEM 179
++ + + D A F+ + +KG P+ +Y LI +CG R EA N + +
Sbjct: 689 LLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGV-SRAEEALNIFQSLLKK 747
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK 206
+ ++ DGL G DL K
Sbjct: 748 QWNSDLIVWTVLVDGLLQEGDSDLCMK 774
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 2/207 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P V + L+ G + G LE A + M +G P++ T+ LI CKSG+VE
Sbjct: 208 KGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVER 267
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +Y + + G +V TY LI G ++ AFRLLH++ G P +I
Sbjct: 268 AMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLID 327
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ ++A F + KG N+ +YT++I + G+F A N + ++ G P
Sbjct: 328 ALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVP 387
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ + + DGL C ++ L E I L
Sbjct: 388 DAHMYSSLIDGL--CRENKLLEAISLL 412
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P VR L+ G +G +E A + ++MI+ G P++ T+ +LI+ C G
Sbjct: 240 MQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGH 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +S+ G + T +LI A+ K G I+EA + L +LV+ G +Y
Sbjct: 300 LEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTS 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+FD A +I +G P+ +Y++LI R + +EA + L +M E G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419
Query: 181 LTPISRCFDLVTD 193
+ + F ++ D
Sbjct: 420 VQANAVPFTILID 432
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++V GL AG A ++ + +G P++ +N+LI+ C +G+
Sbjct: 170 MWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGD 229
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ + G +V TY LI K+G ++ A L ++E G P Y
Sbjct: 230 LELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTT 289
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G + AF ++ G PN LI + GR EA +L + + G
Sbjct: 290 LIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKG 349
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + + D L GK D A + Q
Sbjct: 350 IKVNQVIYTSMIDALCKSGKFDGAHNLMQ 378
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ L G +E A+Q + ++++G + + S+I+ +CKSG+ + + +
Sbjct: 324 VLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITE 383
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D Y LI + + + EA LL++++E G + +I R + D
Sbjct: 384 GFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSP 443
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ G P+ YT I + GR +A + +++M + G+ P ++ + G
Sbjct: 444 KMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG 503
Query: 195 LKNCG 199
N G
Sbjct: 504 YANLG 508
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ +AG L +AK+ ++ +++ G PD + S + C++G ++ + + G
Sbjct: 80 LINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRG 139
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
TY L+ + AGM+ EA + + DG P +Y+ ++ G G+ +A
Sbjct: 140 CARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAV 199
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ KG PN VY LI G A + M G P R + + G
Sbjct: 200 ALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGF 259
Query: 196 KNCGKHDLA 204
GK + A
Sbjct: 260 CKSGKVERA 268
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+R + L+ L G L + + +M + +L T+ +LI C +G++
Sbjct: 41 PPIRCLNTLLMALARHGMLSDMESLAARMPVR----NLHTYTTLINAYCHAGDLPAAKRH 96
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ + G D Y + + G+ A RL + + G P YA +++G
Sbjct: 97 LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISR 186
G +A F+ + G P+ VY+ ++ +CG GR EA L + G P
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCG-AGRAGEAVALLTDAMGKGFVPNVA 215
Query: 187 CFDLVTDGLKNCGKHDLAEKI 207
++ + DG + G +LA I
Sbjct: 216 VYNALIDGYCSTGDLELAIDI 236
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 3/199 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+QGL AG + A + M G PD ++ ++ +C +G V + G
Sbjct: 150 LLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKG 209
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V+ Y LI G ++ A + + G P Y +I G + G+ + A
Sbjct: 210 FVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAM 269
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+S + G PN YTTLI G A L M GL P ++ D L
Sbjct: 270 VLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDAL 329
Query: 196 KNCGKHDLAEKIEQLEVSL 214
KH E+ +Q SL
Sbjct: 330 ---CKHGRIEEAQQFLGSL 345
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V G G A ++ M ++G T+ +L++ +C +G V
Sbjct: 104 GLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREA 163
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D Y I++ + AG EA LL + + G P ++Y +I G
Sbjct: 164 MAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDG 223
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + A F ++ KG PN YT LI + G+ A M E GL P
Sbjct: 224 YCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP 282
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 1/189 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L +G + A ++ K+I +G PD ++SLI+ +C+ ++ + + + + G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+ + ILI + D + + G P Y I+ + G+ +DA
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD-LVTDG 194
++ G PN Y TLI G +A + L M + G P + L+
Sbjct: 480 SMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLL 539
Query: 195 LKNCGKHDL 203
LK HDL
Sbjct: 540 LKKNSYHDL 548
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 87/223 (39%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V + ++ G +E A+ M+ +MI G P+L T+N+LI+ G
Sbjct: 450 MAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGL 509
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILI--------------PAVSKAGMIDEAF--RLLH 104
V ++ G + +Y +L+ ++S ++D LL
Sbjct: 510 VSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLE 569
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+++ + +Y I+ + + ++A F ++ P+ VYT +I C R
Sbjct: 570 EVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMK 629
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
EA +L M + P + + L G A+ I
Sbjct: 630 LLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSI 672
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 77/211 (36%), Gaps = 16/211 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M D G P + + L++G N G + A + MI G P+ E++ L+ + K
Sbjct: 485 MIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNS 544
Query: 60 ---------------EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+++ E+ V KL + Y I +SK ++EA L
Sbjct: 545 YHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLV 604
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ P +Y +I+ +R +A F + + + P Y +I G
Sbjct: 605 GMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEG 664
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F A + ++ + ++ DGL
Sbjct: 665 SFHTAKSIFGDILSKEYNRDEIAWKILIDGL 695
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L+ A + ++ M+K+ P LE++ +I +C+ G ++ + D +KI
Sbjct: 631 LKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKI 690
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
LI + + G + RLL + E P ++Y+
Sbjct: 691 LIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS 724
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P ++ G G + A +M +M ++G PD+ TFNSL++++CK
Sbjct: 333 MFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKR 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+++S+ G D+ +Y IL+ + G + L H++ ++G +
Sbjct: 393 SKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNI 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG D+A F+E++ +G PN Y T+I R GR +A L +M +G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + + + G C DL + E
Sbjct: 513 LKPNTVVYHSLIQGF--CTHGDLIKAKE 538
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 3/201 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M G P L+QG G L AK++V++M+ QG P++ F+S+I ++C G
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEG 567
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V +++ V +G D+ T+ LI G +D+AF +L +V G P Y+
Sbjct: 568 RVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYS 627
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G F+ G+ DD F E+ K P Y+ ++ R GR A EM E
Sbjct: 628 TLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIES 687
Query: 180 GLTPISRCFDLVTDGL--KNC 198
G + ++ GL NC
Sbjct: 688 GTAMSISTYTIILQGLCRNNC 708
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 1 MSDKGF-NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M D+G P + ++ L N G + +A+ + N +I G PD+ TFNSLI+ C G
Sbjct: 543 MMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVG 602
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ + ++ G+ DV TY LI K+G ID+ L ++ P Y+
Sbjct: 603 KMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYS 662
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G FR G+ A F E+ G + YT ++ R EA ++ M
Sbjct: 663 LVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAM 722
Query: 180 GL 181
L
Sbjct: 723 NL 724
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 36/240 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
MS+ G P + +++ L + A M+ +M K G PD+ ++ +I + G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
E+ ++ + + G +V TY ++ A+ KA +D+A +L + ++ P Y
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 120 PIIKGAFRRGQFDDAFCFFSE-----------------------------------IKIK 144
+I G G++ +A F E I K
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
GH P+ Y+ L+ GRFV+ N MT+ G+ S CF+++ + G D A
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P L++ GL AG +AK+M ++MI+ G+ + T+ +++ +C++ +
Sbjct: 652 KRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDE 711
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +++ + + +++ +I A+ K +EA L ++ G P S Y +I
Sbjct: 712 AITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMII 771
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+ G ++A FS ++ G P+ + +I M + G V+A Y+
Sbjct: 772 NLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYM 821
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA-DVSTYKI 85
E+ ++++M + G PD ++N++I+++C + ++M + K C+ DV +Y +
Sbjct: 218 EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTM 277
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + G I +A L + +V+ G P Y I+ + D A ++
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
P+ YT +I GR+ EAA EMT GL P F+ + D L
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V ++ L G L A + +++MI G P+ ++SLI+ C G+
Sbjct: 473 MRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGD 532
Query: 61 VEFCVEMYYSVCKLG-SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ E+ + G +++ + +I ++ G + A + + ++ G P +
Sbjct: 533 LIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFN 592
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G G+ D AF + G P+ Y+TLI + GR + EM
Sbjct: 593 SLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCK 652
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + LV DGL G+ A+K+
Sbjct: 653 RVKPTTVTYSLVLDGLFRAGRTSAAKKM 680
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 2/175 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY-YSVCKLGSCADVSTYKILIPAVSKA 93
++++ G D N+ ++ +C + + + M + + +LG D +Y +I ++
Sbjct: 190 RLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGG 249
Query: 94 GMIDEAFRLLHNLVE-DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
EA +L + + DG +P Y +I G F G+ A F+E+ KG PN
Sbjct: 250 SRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVT 309
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y +++ + +A L +M + + P + + G G+ A K+
Sbjct: 310 YNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 97.4 bits (241), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A++ +M++ G PD++ NSLI K+G + ++++ + + G V T+ LI
Sbjct: 148 AERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLID 207
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A +AG ID A ++ L + G +P ++ +I +GQ D+AF + E++ +G P
Sbjct: 208 ACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEP 267
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
NR Y+ LI CGR G+ A L EM G+ P + + D CGK
Sbjct: 268 NRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDA---CGK 316
Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V+ + L+ AG + A ++ ++M + G P + TFN+LI+ ++G+
Sbjct: 155 MLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGD 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G + T+ LI + + G +DEAF L + G P Y+
Sbjct: 215 IDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSA 274
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R GQ AF E+ G PN +TTLI CG+G + EM E G
Sbjct: 275 LINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERG 334
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + D + DLA
Sbjct: 335 TVPNGVTCSALMDACLKADELDLA 358
Score = 66.2 bits (160), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 3/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V + L+ AG ++ A+Q+ +++ + G P+ TF++LI + G+
Sbjct: 190 MSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQ 249
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + G + TY LI A +AG + AF+ L + G P +
Sbjct: 250 VDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTT 309
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + + +F F E++ +G PN + L+ C + A L M ++G
Sbjct: 310 LIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAFAVLEHMLDVG 369
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ P + T L C + A++
Sbjct: 370 IEPTEVTY---TSLLTQCARLGQADR 392
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G +P R L+ G ++ A + +M +G +P+ T+++LI ++G+
Sbjct: 225 LSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQ 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G +V T+ LI A K ++ +F+L + E G P +
Sbjct: 285 LARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSA 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + + D AF + G P YT+L+T C R G+ A L E+ +
Sbjct: 345 LMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLGQADRAGIVLDELNK 402
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 3/151 (1%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
KQG P F + + +G ++ CV Y ++ + T+ LI +
Sbjct: 90 KQGGVPACNVF---LRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVR 146
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
A R ++E G P +I + G D A F ++ G P+ + TLI
Sbjct: 147 LAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLI 206
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
CGR G A +++ GL+P R F
Sbjct: 207 DACGRAGDIDRARQVFSRLSQAGLSPNDRTF 237
Score = 44.7 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+Q A +++A +++ M+++ PD ET+ L+ + +G ++ VE+ G
Sbjct: 548 LLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEG 607
Query: 76 SCADVS--TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
++++ TY L+ A +A + AFR++ ++ E G P Y +++
Sbjct: 608 HGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDSKA 667
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLI 157
A F ++ +G P YT+L+
Sbjct: 668 AVEVFEAMETEGVRPGVRSYTSLL 691
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
+ L++ ++ +V+ ++ + + D T+ +L+ AV AG +D+A L+
Sbjct: 546 SDLLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRA 605
Query: 109 DGHNPFPS--LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+GH + Y+ ++ R + AF ++ G P Y L+ +C R R
Sbjct: 606 EGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVC-RHSRD 664
Query: 167 VEAANYLMEMTEM-GLTPISRCF 188
+AA + E E G+ P R +
Sbjct: 665 SKAAVEVFEAMETEGVRPGVRSY 687
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V ++L+ L G + A ++ KM + G P+ ++N L+ +CK +
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E + G D+ TY L+ A+ K G +D A +L+ L G +P Y
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DDA E+K KG P+ Y+TL+ R G+ EA + ++ EMG
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ + GL
Sbjct: 523 VKPNAITYNSIMLGL 537
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ L +E A + ++ M+ +G PD+ T+N+L+ +CK G+
Sbjct: 378 MPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ VE+ + G + TY +I +SK G D+A +LL + G P Y+
Sbjct: 438 VDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYST 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ D+A FF +++ G PN Y +++ + + V A ++L M G
Sbjct: 498 LVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARG 557
Query: 181 LTPISRCFDLVTDGL 195
P + ++ +GL
Sbjct: 558 CKPTETSYMILIEGL 572
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V ++L+ G+ G L+ A + +N M G P++ T N ++ ++C +G
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G V T+ ILI + + G+I A +L + + G P Y P
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + + + A + + +G P+ Y TL+T + G+ A L ++ G
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P+ ++ V DGL GK D A K+
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKL 479
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V + +++ L ++G L+ A +++++ +++ PD+ T+ LIE CK V ++
Sbjct: 209 SPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMK 268
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + G DV TY +LI + K G +DEA R L+++ G P + I++
Sbjct: 269 LLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMC 328
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G++ DA F +E+ KG P+ + LI R G A + L +M + G TP S
Sbjct: 329 STGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSL 388
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLEV 212
++ + L C + IE L++
Sbjct: 389 SYNPLLHAL--CKDKKMERAIEYLDI 412
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 34/243 (13%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L++GL G A +++ + G+ PD+ T+N LI CK+GE
Sbjct: 136 MVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGE 195
Query: 61 VEFCVEM----------------YYSVCKLGSCA----------------DVSTYKILIP 88
+ +++ ++C G DV TY ILI
Sbjct: 196 IGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIE 255
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A K + +A +LL + + G P Y +I G + G+ D+A F + + G P
Sbjct: 256 ATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQP 315
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
N + ++ GR+++A +L EM G +P F+++ + L C K + I+
Sbjct: 316 NVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL--CRKGLIGRAID 373
Query: 209 QLE 211
LE
Sbjct: 374 VLE 376
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G ++ A +++N++ +G P L T+N++I+ + K G+
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY L+ +S+ G +DEA H+L E G P Y
Sbjct: 473 TDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNS 532
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q A F + + +G P Y LI G EA L E+ G
Sbjct: 533 IMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
Query: 181 LTPISRCFDLVT 192
+ S +V
Sbjct: 593 VVKKSSAEQVVV 604
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
++ L+ G LE + + M+ +G PD+ SLI +CK+G+ + + G+
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
DV TY +LI K G I A +LL + +P Y I++ G+ +A
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAME 233
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ P+ YT LI + +A L EM + G P ++++ +G+
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293
Query: 197 NCGKHDLA 204
G+ D A
Sbjct: 294 KEGRLDEA 301
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++KG P ++L+ L+ A + + + ++ +G PD+ F + I CK G+
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAFH-VVCKGVSPDVYLFTTAINAFCKGGK 267
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E++ + + G +V TY +I + +G DEAF +VE G P Y+
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG + + DA+C E+ KG PPN VY LI G +A M G
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+ S ++ + G G+ D+AE++
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERL 414
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +++ G A E +++ ++M+ P+ +N LI C+SG +
Sbjct: 597 GMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMA 656
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + G + +TY LI +S ++EA LL + +G P Y +I G
Sbjct: 657 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDG 716
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ GQ C E+ K PN+ YT +I R G EA+ L EM E G+ P
Sbjct: 717 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPD 776
Query: 185 S 185
S
Sbjct: 777 S 777
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
+ +G P T N L+ ++ ++ E + C E ++ VCK G DV + I A K G
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAINAFCKGGK 267
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++EA L + E G P Y +I G G++D+AF F ++ +G P Y+
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L+ + R +A L EMTE G P ++ + D L G + A +I+ L VS
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVS 385
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + +LV+GL A + A ++ +M ++G P++ +N+LI+++ ++G
Sbjct: 313 MVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G STY LI K+G D A RLL ++ G N +
Sbjct: 373 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTS 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I FD A F E+ ++ P + TTLI+ + G+ +A ++ G
Sbjct: 433 VICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
++ + + GL GK + +I++
Sbjct: 493 FLVDTKTSNALLHGLCEAGKLEEGFRIQK 521
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF + L+ G L+ A +++M+K+G PD T++ LI + +VE
Sbjct: 526 RGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEE 585
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G DV TY ++I KA +E +L ++ + P +Y +I
Sbjct: 586 AIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIG 645
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
R G+ A ++K KG PN YT+LI R EA L EM GL P
Sbjct: 646 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEP 705
Query: 184 ISRCFDLVTDGLKNCGK 200
+ + DG G+
Sbjct: 706 NVFHYTALIDGYGKLGQ 722
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G A ++ K + +G D +T N+L+ +C++G++E + + G
Sbjct: 468 LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRG 527
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +Y LI +DEAF + +V+ G P Y+ +I+G + ++A
Sbjct: 528 FVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAI 587
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ + K G P+ Y+ +I C + R E EM L P + ++ +
Sbjct: 588 QFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAY 647
Query: 196 KNCGKHDLAEKIEQ 209
G+ +A ++ +
Sbjct: 648 CRSGRLSMALELRE 661
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KGF P V + L+ L+ AG L A ++ + M+ +G T+N+LI+ CKSG+
Sbjct: 348 MTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQ 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G + ++ +I + M D A R + ++ +P L
Sbjct: 408 ADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTT 467
Query: 121 IIKGAFRR-----------------------------------GQFDDAFCFFSEIKIKG 145
+I G + G+ ++ F EI +G
Sbjct: 468 LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRG 527
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+R Y TLI+ C + EA ++ EM + GL P + + ++ GL N K
Sbjct: 528 FVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNK 582
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + ++ GL +G + A KM+++G +P L T++ L++ + K+
Sbjct: 278 MEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKR 337
Query: 61 V--EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
+ +CV + + G +V Y LI ++ +AG +++A + +V G + S Y
Sbjct: 338 IGDAYCV--LKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTY 395
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+IKG + GQ D A E+ G N+ +T++I + F A ++ EM
Sbjct: 396 NTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLL 455
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLA 204
++P + GL GKH A
Sbjct: 456 RNMSPGGGLLTTLISGLCKHGKHSKA 481
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 3/185 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+SA + V +M+ + P +LI +CK G+ VE++ G D T
Sbjct: 443 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNA 502
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + +AG ++E FR+ ++ G Y +I G + D+AF F E+ KG
Sbjct: 503 LLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG 562
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y+ LI + EA + + G+ P + ++ DG C K + E
Sbjct: 563 LKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDG---CCKAERTE 619
Query: 206 KIEQL 210
+ ++L
Sbjct: 620 EGQKL 624
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P L++G+ +E AK ++ +M +G +P++ + +LI+ K G+
Sbjct: 663 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQ 722
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + TY ++I ++ G + EA RLLH + E G P Y
Sbjct: 723 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKE 782
Query: 121 IIKGAFRRGQFDDAF 135
I G ++G AF
Sbjct: 783 FIYGYLKQGGVLQAF 797
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic; AltName: Full=Protein PROTON GRADIENT
REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MSD+ F+P L+ GL +G L AKQ+ M+ G P+ +N LI K+GE
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G D+ TY +L+ + G +DE L E G NP Y
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 121 IIKGAFRRGQFDDAFCFFSEIKI-KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
II G + + ++A F+E+K +G P+ Y +LI G G EA E+
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
GL P F+ + G GK + A + Q V+
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 1/201 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P + +LL+ GLL A +E A+ + ++ G PD+ T+N L++ KSG+++
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPI 121
E+Y + A+ T+ I+I + KAG +D+A L ++L+ D +P Y P+
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + G+ +A F + G PN +Y LI G+ G A M + G+
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 182 TPISRCFDLVTDGLKNCGKHD 202
P + + ++ D L G+ D
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVD 978
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V +L+ L A L+ AK++ KM PD T+ +L++ + +
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + K G DV T+ IL+ A+ KAG EAF L + + G P Y
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + DDA F ++ G P Y I G+ G V A +M G
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 181 LTP 183
+ P
Sbjct: 464 IAP 466
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + +G SA + KM +G P++ N+ + ++ K+G
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++Y + +G D TY +++ SK G IDEA +LL ++E+G P +
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ + D+A+ F +K P Y TL+ G+ G+ EA M + G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + D L + LA K+
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKM 630
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF + L+ LL + + A ++ +MI +G P L+T++SL+ + K +
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + LG +V T+ I I + +AG I+EA+ +L + ++G P Y
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + D A F ++K H P+R Y TL+ + EM + G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P F ++ D L C + E + L+V
Sbjct: 359 HVPDVVTFTILVDAL--CKAGNFGEAFDTLDV 388
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + + L AG AKQ+ + G PD T+N +++ K GE
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G DV LI + KA +DEA+++ + E P Y
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A F + KG PPN + TL + A L +M +MG
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++ + GL G+
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQ 658
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + L+ GLL L+ A ++ M G P T+ I+ KSG+
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G ++ + +++KAG EA ++ + L + G P Y
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K + G+ D+A SE+ G P+ V +LI + R EA M M EM
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P ++ + GL GK + E IE E
Sbjct: 569 LKPTVVTYNTLLAGLGKNGK--IQEAIELFE 597
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P ++ L+ GL ++S ++ +M G P++ TF I + ++G++
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + G DV TY +LI A+ A +D A + + H P Y ++
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
D F+SE++ GH P+ +T L+ + G F EA + L M + G+ P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++ + GL + D A
Sbjct: 397 NLHTYNTLICGLLRVHRLDDA 417
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ L AG + A +++ +M +G PD+ T+ LI+ +C + +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + D TY L+ S +D + + +DGH P +
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G F +AF ++ +G PN Y TLI R R +A M +G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 181 LTPISRCFDLVTD 193
+ P + + + D
Sbjct: 429 VKPTAYTYIVFID 441
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + L+ L A ++ A +M +M + P + T+N+L+ + K+G+
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + + G + T+ L + K + A ++L +++ G P Y
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + GQ +A CFF ++K + VY +T+C V+A
Sbjct: 649 IIFGLVKNGQVKEAMCFFHQMK-------KLVYPDFVTLCTLLPGVVKA----------- 690
Query: 181 LTPISRCFDLVTDGLKNCGKH 201
+ I + ++T+ L NC
Sbjct: 691 -SLIEDAYKIITNFLYNCADQ 710
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 36/192 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++L+ G AG ++A + +M+K+G PDL+T++ L++ +C G
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSK---------------------------- 92
V+ + + + + G DV Y ++I + K
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 93 --------AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
AGM++EA ++ + + G P + +I+G G+ + A+ + +
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 145 GHPPNRPVYTTL 156
G PN Y L
Sbjct: 1097 GFSPNTGTYEQL 1108
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +++ L G LE + + M K+ D T+ ++ +++ G ++ + +
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y LI + K+ EA + ++ +G P Y+ ++ G +R D
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
E++ G PN +T I + GR G+ EA L M + G P + ++ D
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 194 GLKNCGKHDLAEKI 207
L K D A+++
Sbjct: 302 ALCTARKLDCAKEV 315
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 108/207 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G +P ++ +L+ G ++ A +++ +M + P++ T++SLI+ +CKSG+
Sbjct: 238 MAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGK 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G ++ TY ++ A+ K +D A LL + G P Y
Sbjct: 298 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTI 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G+ +DA F ++ +KGH N YT +I G F EA L +M + G
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG 417
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ ++++ L ++++AEK+
Sbjct: 418 CIPNAKTYEIIILSLFKKDENEMAEKL 444
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ NP V +LV G G ++ AK ++ M+ QG P + T+NSL++ +V
Sbjct: 171 ENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNK 230
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ ++ +LG D+ +Y ILI K M+DEA LL + P Y+ +I
Sbjct: 231 AKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLID 290
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ A E+ +G PPN Y++++ + + A L +M G+ P
Sbjct: 291 GLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQP 350
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ GL GK + A K+
Sbjct: 351 NMYTYTILIKGLCQSGKLEDARKV 374
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+ GL +G + A ++V++M +G P++ T++S+++ +CK+ +
Sbjct: 273 MHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQ 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G ++ TY ILI + ++G +++A ++ +L+ GHN Y
Sbjct: 333 VDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I+G +G FD+A S+++ G PN Y +I + A L EM E
Sbjct: 393 MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++L+ G++ SA ++ K++K G P+ T N+LI+ +C +G+
Sbjct: 88 MEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGK 147
Query: 61 V--EFC--------VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
+ + C V+++ + DV T+ IL+ K G + EA +L ++ G
Sbjct: 148 IHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG 207
Query: 111 HNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
P Y ++ G F Q + A F+ + G P+ Y+ LI + EA
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAM 267
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L EM + P + + DGL GK A K+
Sbjct: 268 ELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKL 304
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 90/214 (42%), Gaps = 12/214 (5%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP + ++ L+ + + + + KM +G P+L N LI + C+ G + +
Sbjct: 60 PPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSV 119
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMI----------DEAFRLLHNLVEDGHNPFPSL 117
+ K+G + T LI + G I +A L + ++ + NP
Sbjct: 120 LTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYT 179
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+ ++ G + G+ +A + + I+G P Y +L+ + +A + M
Sbjct: 180 FTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA 239
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++G++P + + ++ +G C + E +E L+
Sbjct: 240 QLGVSPDIQSYSILINGF--CKIKMMDEAMELLK 271
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G ++ A+++VN+M+ QGS D T+NSLI+ +C++GEV+ ++ + + G
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ ILI + ++GM++EA +V G P + +I G R G+ +D
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F +++ +G PP+ Y TL++ +GG +A L E E G P R + ++ L
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P G + L+ + A ++ +M ++G PD+ TFNSLI +C+ E
Sbjct: 444 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 503
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G A+ TY LI A + G I EA +L++ +V G Y
Sbjct: 504 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNS 563
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG R G+ D A F ++ G P+ LI R G EA + EM G
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP F+ + +GL G+
Sbjct: 624 STPDIVTFNSLINGLCRAGR 643
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V +LV G G ++ A ++N+M G P+ FN LI CK
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE++ + + G DV T+ LI + + I A LL +++ +G Y
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG+ +A +E+ +G + Y +LI R G +A + +M G
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE-QLEVSLR 215
L P S +++ +GL C + E +E Q E+ LR
Sbjct: 589 LVPSSISCNILINGL--CRSGMVEEAVEFQKEMVLR 622
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ GL ++ A ++ MI +G + T+N+LI + GE
Sbjct: 479 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 538
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + GS D TY LI + +AG +D+A L ++ DG P
Sbjct: 539 IKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNI 598
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G ++A F E+ ++G P+ + +LI R GR + ++ G
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ + L
Sbjct: 659 IPPDTVTYNTLMSWL 673
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ GL +G +E A + +M+ +GS PD+ TFNSLI +C++G
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 643
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + M+ + G D TY L+ + K G + +A LL +EDG P ++
Sbjct: 644 IEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSI 703
Query: 121 IIKGAFRRGQFD 132
+++ + D
Sbjct: 704 LLQSLVPQETLD 715
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+ G + G L+ AK +++ M+ G PD+ T+NSLI K G V +E+ +
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V +Y IL+ K G IDEA+ LL+ + DG P + +I + + +A
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ KG P+ + +LI+ A L +M G+ + ++ + +
Sbjct: 473 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 532
Query: 195 LKNCGKHDLAEKI 207
G+ A K+
Sbjct: 533 FLRRGEIKEARKL 545
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +++++ L++ + A + M+ + P L TF +++ +C EV+ + +
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G + Y+ LI ++SK ++EA +LL + G P + +I G +
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 293
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ ++A + + I+G P+ Y L+ + GR A + + + P S
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVI 349
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
F+ + G G+ D A+ +
Sbjct: 350 FNTLIHGFVTHGRLDDAKAV 369
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 72/166 (43%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
+P +++N ++E + + ++Y + + T+ +++ A+ +D A
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+L ++ + G P +Y +I + + ++A E+ + G P+ + +I
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ R EAA + M G TP + + +GL G+ D A+ +
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDL 338
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GL AG +E M K+ +G PD T+N+L+ +CK G
Sbjct: 619 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGF 678
Query: 61 VEFCVEMYYSVCKL-------GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
V Y C L G + T+ IL+ ++ +D R +N V
Sbjct: 679 V-------YDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR--RTFYNAV 723
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G NP ++ +++ G + A + +M ++ PD+ T++SLI+ + KSG
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G + TY ++ A+ K +D+A LL L + G P Y+
Sbjct: 416 ISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSI 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G+ +DA F + +KGH N YT +I G F EA L +M + G
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ ++++ L ++D+AEK+
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKL 562
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ G G L A + NKMI + PD+ TFN L+ CK G+
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G + TY L+ +++A + + + + G NP Y+
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +FD+A F E+ K P+ Y++LI + GR A + +M + G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P R ++ + D L C H + + I L
Sbjct: 431 VPPTIRTYNSILDAL--CKIHQVDKAIALL 458
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+ GL +G + A Q+V++M +G P + T+NS+++ +CK +
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQ 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G ++ TY ILI + ++G +++A ++ L+ GHN Y
Sbjct: 451 VDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTI 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G F++A S+++ G P+ Y +I + A L EM G
Sbjct: 511 MIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Query: 181 LTP 183
+ P
Sbjct: 571 VRP 573
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++LV G ++ K + + M+KQG P+ T+NSL++ C EV +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ + G D+ +Y I+I K DEA L + P Y+ +I G +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A ++ +G PP Y +++ + + +A L ++ + G+ P
Sbjct: 413 SGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYT 472
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ ++ GL GK + A K+
Sbjct: 473 YSILIKGLCQSGKLEDARKV 492
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++L+ G + A + K++K G PD TF +LI+ +C G+
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + V LG D +Y LI + K G A LL + + P +Y
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + ++AF FSE+ KG P+ Y+ LI+ G+ +A + +M
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+++ + GK
Sbjct: 291 IKPDVYTFNILVNAFCKDGK 310
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P +R + ++ L ++ A ++ K+ +G P++ T++ LI+ +C+SG+
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G +V TY I+I G+ +EA LL + ++G P Y
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II F++ + D A E+ +G P + I + + + + ++ +TE
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGVRPRQ------IAIWFQKKKEYDVSSEPKTLTEQS 599
Query: 181 LTPISRCFDLVT-DGLKNCG 199
+ F LV DG++ G
Sbjct: 600 VPKFKAMFGLVICDGMEWNG 619
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP + ++ L+ + + + + KM +G P+L N LI C+ G + F +
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K+G D T+ LI + G I +AF +V G + Y +I G +
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A + PN +Y T+I + EA + EM G++P
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262
Query: 188 FDLVTDGLKNCGK 200
+ + G GK
Sbjct: 263 YSALISGFCILGK 275
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 81/189 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +A ++ ++ P++ +N++I+++CK V +++ + G
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG 255
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI G +++A L + ++ + P + ++ + G+ +
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + +G PN Y +L+ +A + M + G+ P + + ++ +G
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375
Query: 196 KNCGKHDLA 204
K D A
Sbjct: 376 CKIKKFDEA 384
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 4/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V ++L+ L G + AK ++ MI++G P+L T+NSLIE C G+
Sbjct: 303 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGD 362
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ S+ G DV Y +LI K ++EA +L + +++ G P Y
Sbjct: 363 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 422
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G F+ G+ DA F +K+ G P + +Y + + G EA ++
Sbjct: 423 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 482
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQLEV 212
+ CF+ + DGL GK +L EK+ Q E+
Sbjct: 483 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P V +++ L + A+ + +M QG P + ++ SLI C G+ E
Sbjct: 238 FKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAK 297
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + G +V T+ +LI + K G + EA LL +++ G P Y +I+G
Sbjct: 298 RLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF 357
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G + A F + KG P+ YT LI + + EA M ++G P
Sbjct: 358 CLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDV 417
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
+ + + GL GK A+K+
Sbjct: 418 KTYGALLTGLFQGGKVGDAKKL 439
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +E A ++ N M++ G PD++T+ +L+ + + G+
Sbjct: 373 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + G D+ Y I + + K G + EA L + L +
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A+ F ++ + P+ Y +I RGG+ V+A +M + G
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552
Query: 181 LTP 183
TP
Sbjct: 553 CTP 555
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 92/249 (36%), Gaps = 43/249 (17%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ L+ GL + + N+M G PD T N L+ +C V + +
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ TY LI + I +A L + + G P Y ++KG R
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 128 RGQFD-------------------------------DAFC----------FFSEIKIKGH 146
G DA C F E+K++G
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P YT+LI GG++ EA EM G+ P F+++ D L C + + E
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVL--CKEGKVIEA 331
Query: 207 IEQLEVSLR 215
+ LEV ++
Sbjct: 332 KDLLEVMIQ 340
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+ + GL G L A ++ NK+ D+E FN LI+ +CK+G++E E++ + +
Sbjct: 457 IFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE 516
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
DV TY I+I + G + +A L + ++G P YA +I+G F + +
Sbjct: 517 ELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLE 574
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 7/203 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V+ L+ GL G + AK++ M G DL + + +CK+G
Sbjct: 408 MLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 467
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + D+ + LI + KAG ++ A+ L L ++ P Y
Sbjct: 468 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 527
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R GQ A F +++ G P++ Y TLI RG F E+ L ++ E+
Sbjct: 528 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI----RG--FFESKK-LEKVVELL 580
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
+ R L + L++ +H L
Sbjct: 581 HMMVQRDVSLDVNILRHNRRHAL 603
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 11/223 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLN--AGYLESAK--QMVNKMIKQGSDPDLETFNSLIETIC 56
+S + FN P+ + L L N G + + + Q + M+ P L +F L+ +
Sbjct: 48 VSPQNFNTPISFQQQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLA 107
Query: 57 KSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
K +Y + G D T IL+ + + E ++ ++ G+ P
Sbjct: 108 KIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIV 167
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +IKG + A F+ ++ G PN Y TL+ R G A EM
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227
Query: 177 TE------MGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEV 212
+ P+ + ++ D L + D A + E+++V
Sbjct: 228 LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKV 270
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + +++GL +A + A++++++M ++ D TFN L++ C++G
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG G++ DA S++ +G PPN + TLI + G +A L +M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK + E +E L V
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTE--EALELLNV 521
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++GL +AG A++++++MI+QG P+ TFN+LI +CK G
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG +EA LL+ +V G +P +Y+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R G+ + F IK + +Y +I+ + A ++ M G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + ++ GL + G LA++ ++L
Sbjct: 597 CMPNESTYTMLIKGLASEG---LAKEAQEL 623
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M+ G PD+ T+ ++I CK G ++ V + S+
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + AG +A L+ +++ G P P + +I ++G +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G++P + + +
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539
Query: 194 GLKNCGK 200
L G+
Sbjct: 540 ALSREGR 546
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+GL G + A +++++M +G P ++ ++E C+SG V + ++ G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +++ A+ + G +DEA LL L G Y ++KG ++ D
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ PN + TLI R G F L +M+E G TP R + + DG+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 196 KNCGKHDLAEKI 207
G ++A +I
Sbjct: 297 CKEGHLEVANEI 308
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G + + +++GL A ++++++M++ P++ TFN+LI +C++G E
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + G D+ Y +I + K G ++ A +L+ + G P Y ++KG
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 125 AFRRGQFDDAFCFFSEIKIKGHP-----------------------------------PN 149
++ +A SE+ K P P+
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
YTT+I + G EA L M+ G P + + +V GL + G+ AE++
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC---K 57
M KG +L++ + G ++ A ++ K+ G + D+ ++N++++ +C +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+VE E+ + ++ ++ T+ LI + + G+ + +L + E G P +
Sbjct: 232 WGDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
YA II G + G + A + + G PN Y T++ R+ EA L EM
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHD-LAEKIEQL 210
+ F+++ D G D + E +EQ+
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P ++++ +G ++ +++ M +G D N ++ IC+ G
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G AD+ +Y ++ + A + L+ +V P +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G F+ +++ G P+ +Y T+I + G A L M G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P C++ V GL + + AE++
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEEL 343
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
P + P+++G RG+ DA E+ KG P P+Y ++ R G F +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 173 LMEMTEMGLT 182
L M G T
Sbjct: 169 LEAMHAKGCT 178
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + +++GL +A + A++++++M ++ D TFN L++ C++G
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG G++ DA S++ +G PPN + TLI + G +A L +M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK + E +E L V
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTE--EALELLNV 521
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++GL +AG A++++++MI+QG P+ TFN+LI +CK G
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG +EA LL+ +V G +P +Y+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R G+ + F IK + +Y +I+ + A ++ M G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + ++ GL + G LA++ ++L
Sbjct: 597 CMPNESTYTMLIKGLASEG---LAKEAQEL 623
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M+ G PD+ T+ ++I CK G ++ V + S+
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + AG +A L+ +++ G P P + +I ++G +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G++P + + +
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539
Query: 194 GLKNCGK 200
L G+
Sbjct: 540 ALSREGR 546
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+GL G + A +++++M +G P ++ ++E C+SG V + ++ G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +++ A+ + G +DEA LL L G Y ++KG ++ D
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ PN + TLI R G F L +M+E G TP R + + DG+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 196 KNCGKHDLAEKI 207
G ++A +I
Sbjct: 297 CKEGHLEVANEI 308
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC---K 57
M KG +L++ + G ++ A ++ K+ G + D+ ++N++++ +C +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+VE E+ + ++ ++ T+ LI + + G+ + +L + E G P +
Sbjct: 232 WGDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
YA II G + G + A + + G PN Y T++ R+ EA L EM
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHD-LAEKIEQL 210
+ F+++ D G D + E +EQ+
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G + + +++GL A ++++++M++ P++ TFN+LI +C++G E
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + G D+ Y +I + K G ++ A +L+ + G P Y ++KG
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 125 AFRRGQFDDAFCFFSEIKIKGHP-----------------------------------PN 149
++ +A SE+ K P P+
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
YTT+I + G EA L M+ G P + + +V GL + G+ AE++
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P ++++ +G ++ +++ M +G D N ++ IC+ G
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G AD+ +Y ++ + A + L+ +V P +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G F+ +++ G P+ +Y T+I + G A L M G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P C++ V GL + + AE++
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEEL 343
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
P + P+++G RG+ DA E+ KG P P+Y ++ R G F +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 173 LMEMTEMGLT 182
L M G T
Sbjct: 169 LEAMHAKGCT 178
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + + + + AG E + + ++ +G PD +++ LI ++ K+G
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+YY++ G D Y +I K+G +++A++LL + GH+P Y
Sbjct: 461 ARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGS 520
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D+A+ F E K G N+ +Y++LI G+ GR EA + EM + G
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
LTP ++ + DGL AE+I + V +S+
Sbjct: 581 LTPNVYTWNCLLDGLVK------AEEINEALVCFQSM 611
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 35/231 (15%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P R +L+ L+ AG+ ++ M QG D +N++I+ CKSG+V
Sbjct: 439 RGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNK 498
Query: 64 CVEMYYSVCKLGSCADVSTY--------KI---------------------------LIP 88
++ + +G V TY KI LI
Sbjct: 499 AYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLID 558
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
K G +DEA+ ++ +++ G P + ++ G + + ++A F +K P
Sbjct: 559 GFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTP 618
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
N+ Y LI + +F +A + EM + GL P + + + GL G
Sbjct: 619 NQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSG 669
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P VR ++++ L A L+ A + M + PD TF SLI+ + K G
Sbjct: 296 MKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGR 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +Y + +V Y LI K ++ ++ ++ G +P L
Sbjct: 356 VDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNT 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F EIK +G P+ Y+ LI + G E M + G
Sbjct: 416 YMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG 475
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+R ++ V DG GK + A ++
Sbjct: 476 CVLDTRAYNTVIDGFCKSGKVNKAYQL 502
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M F+ + ++ + G ++ A + ++M G PD T+ S++ +CK+
Sbjct: 122 MKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANR 181
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ VE++ + + Y +I AG DEA+ LL G P Y
Sbjct: 182 LDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNC 241
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++G+ D A F E+K + PN P Y +I M + G A M E G
Sbjct: 242 ILTCLGKKGKTDKALRIFEEMK-RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG 300
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P R +++ D L K D A
Sbjct: 301 LFPNVRTINIMIDRLCKAQKLDEA 324
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V L++ G +++A ++++M D D+ +N I+ K G+
Sbjct: 87 MQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGK 146
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D TY ++ + KA +DEA + + ++ P Y
Sbjct: 147 VDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNT 206
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G G+FD+A+ + KG P+ Y ++T G+ G+ +A EM
Sbjct: 207 MIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM 262
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L G + A ++ +M K+ + P+L T+N +I +CK+G VE
Sbjct: 230 KGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEA 288
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ ++ + G +V T I+I + KA +DEA + + +P + + +I
Sbjct: 289 AFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLID 348
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G+ DDA+ + + PN VYT+LI + R + EM G +P
Sbjct: 349 GLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSP 408
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P LV + + L A ++ M P + +LI + + GE
Sbjct: 17 MSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGE 76
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + +LG +V LI S+ G +D A LL + + + LY
Sbjct: 77 SDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNV 136
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D A+ FF E+K G P+ YT+++ + + R EA +M +
Sbjct: 137 CIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNR 196
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ + G + GK D A
Sbjct: 197 QVPCAYAYNTMIMGYGSAGKFDEA 220
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+++G P++ T+N L++ + K+ E+ + + S+ L
Sbjct: 556 LIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLK 615
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + K ++AF + + G P Y +I G + G A
Sbjct: 616 CTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQAS 675
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
F + G P+ Y +I R ++A
Sbjct: 676 SLFERFRASGGIPDSASYNAMIEGLSIANRALDA 709
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ GL+ A + A M P+ T+ LI +CK +
Sbjct: 576 MMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRK 635
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G + TY +I ++K+G + +A L G P + Y
Sbjct: 636 FNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNA 695
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G + DA+ F E ++KG
Sbjct: 696 MIEGLSIANRALDAYQLFEETRLKG 720
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G ++ AKQ+ N+MI QG P+ ++N+LI +C+ G
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ G+ ++ TY IL+ K G +AFRL + P +Y
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G DA FSE+ +KG PN +YTT+I + G EA M E G
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Query: 181 LTPISRCFDLVTDGL 195
P ++++ G
Sbjct: 549 CPPDEISYNVIIRGF 563
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + + L+QGL N + A ++N+M PD+ TFN L++TICK G+
Sbjct: 264 MKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGK 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ ++G DV TY L+ S + EA +L ++ G P Y
Sbjct: 324 VSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A F+E+ +G PN Y TLI + G EA N M G
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG 443
Query: 181 LTPISRCFDLVTDGL 195
P + ++ DG
Sbjct: 444 NLPNLFTYSILLDGF 458
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + +L+ + ++ A ++ K+IK G P + TF +LI +CK G+
Sbjct: 124 MELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGK 183
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ + G DV TY +I + K G A LL + E G P Y+
Sbjct: 184 FAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYST 243
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + + ++A FS +K+KG P+ Y +LI ++ EA+ L EM +
Sbjct: 244 IIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN 303
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F+++ D + GK A+ +
Sbjct: 304 IMPDIVTFNVLVDTICKEGKVSEAQGV 330
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V L+ G + A+++ + MI +G PD+ ++N LI CK
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G + +Y LI + + G + EA L N+ +G+ P Y+
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSI 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G F AF F ++ PN +Y LI + G +A E+ G
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P ++ + + +GL C + L E +E
Sbjct: 514 LQPNAQIYTTIINGL--CKEGLLDEALE 539
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ L G A ++ + M+ +G PD+ T+ ++I +CK GE
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAA 222
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G +V TY +I + K ++EA + + G +P Y +I+G
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQG 282
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
Q+ +A +E++ P+ + L+ + G+ EA L MTEMG+ P
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ + A + + M +G PD+ T+NSLI+ +C +
Sbjct: 229 MEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + L D+ T+ +L+ + K G + EA +L + E G P Y+
Sbjct: 289 WKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + +A F + KG P+ Y LI + R EA EM G
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 181 LTPISRCFDLVTDGLKNCG 199
LTP + ++ + GL G
Sbjct: 409 LTPNNVSYNTLIHGLCQLG 427
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++LV + G + A+ ++ M + G +PD+ T++SL+ EV ++
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ G DV +Y ILI K IDEA +L + ++ G P Y +I G +
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQ 425
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F + G+ PN Y+ L+ + G F +A M P
Sbjct: 426 LGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVM 485
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++++ D + G A K+
Sbjct: 486 YNILIDAMCKSGNLRDARKL 505
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ G GY A ++ M S P+L +N LI+ +CKSG
Sbjct: 439 MHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGN 498
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + Y +I + K G++DEA N+ EDG P Y
Sbjct: 499 LRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNV 558
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G A E++ KG
Sbjct: 559 IIRGFLHHKDESRAVQLIGEMRDKG 583
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 1/183 (0%)
Query: 16 LVQGLLNAG-YLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+ ++ G Y ++ + +M G P++ T + LI V+ + + KL
Sbjct: 103 LLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKL 162
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + T+ LI + K G +A L ++V G P Y II G + G+ A
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAA 222
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+++ G PN Y+T+I + R EA + M G++P ++ + G
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQG 282
Query: 195 LKN 197
L N
Sbjct: 283 LCN 285
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 4/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V ++L+ L G + AK ++ MI++G P+L T+NSLIE C G+
Sbjct: 295 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGD 354
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ S+ G DV Y +LI K ++EA +L + +++ G P Y
Sbjct: 355 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 414
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G F+ G+ DA F +K+ G P + +Y + + G EA ++
Sbjct: 415 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 474
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQLEV 212
+ CF+ + DGL GK +L EK+ Q E+
Sbjct: 475 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 510
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +E A ++ N M++ G PD++T+ +L+ + + G+
Sbjct: 365 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + G D+ Y I + + K G + EA L + L +
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A+ F ++ + P+ Y +I RGG+ V+A +M + G
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544
Query: 181 LTP 183
TP
Sbjct: 545 CTP 547
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P + L++GL + A + +M K G P+ T+ +L++ +C++G +
Sbjct: 160 RGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISI 219
Query: 64 CVEMYYSVCKLGSCADVS------TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++++ + S ++ +Y I+I A+ K DEA L + G P
Sbjct: 220 ALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVIS 279
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y ++ +++A F+E+ +G PN + LI + + G+ +EA + L M
Sbjct: 280 YTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI 331
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ G+ P ++ + +G G + A ++
Sbjct: 332 QRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+ + GL G L A ++ NK+ D+E FN LI+ +CK+G++E E++ + +
Sbjct: 449 IFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE 508
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
DV TY I+I + G + +A L + ++G P YA +I+G F + +
Sbjct: 509 ELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLE 566
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 7/203 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V+ L+ GL G + AK++ M G DL + + +CK+G
Sbjct: 400 MLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + D+ + LI + KAG ++ A+ L L ++ P Y
Sbjct: 460 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R GQ A F +++ G P++ Y TLI RG F E+ L ++ E+
Sbjct: 520 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI----RG--FFESKK-LEKVVELL 572
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
+ R L + L++ +H L
Sbjct: 573 HMMVQRDVSLDVNILRHNRRHAL 595
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 89/249 (35%), Gaps = 51/249 (20%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ L+ GL + + N+M G PD T N L+ +C V + +
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ TY LI + I +A L + + G P Y ++KG R
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 128 RGQFD-------------------------------DAFC----------FFSEIKIKGH 146
G DA C F E+K++G
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P YT+L+ + EA EM G+ P F+++ D L C + + E
Sbjct: 274 TPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVL--CKEGKVIEA 323
Query: 207 IEQLEVSLR 215
+ LEV ++
Sbjct: 324 KDLLEVMIQ 332
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 11/223 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLN--AGYLES--AKQMVNKMIKQGSDPDLETFNSLIETIC 56
+S + FN P+ + L L N G + + A Q + M+ P L +F L+ +
Sbjct: 48 VSPQNFNTPISFQQQLSMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLA 107
Query: 57 KSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
K +Y + G D T IL+ + + E ++ ++ G+ P
Sbjct: 108 KIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIV 167
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +IKG + A F+ ++ G PN Y TL+ R G A EM
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227
Query: 177 TE------MGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEV 212
+ P+ + ++ D L + D A + E+++V
Sbjct: 228 LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKV 270
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + +++GL +A + A++++++M ++ D TFN L++ C++G
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG G++ DA S++ +G PPN + TLI + G +A L +M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK + E +E L V
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTE--EALELLNV 521
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++GL +AG A++++++MI+QG P+ TFN+LI +CK G
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG +EA LL+ +V G +P +Y+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R G+ + F IK + +Y +I+ + A ++ M G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + ++ GL + G LA++ ++L
Sbjct: 597 CMPNESTYTMLIKGLASEG---LAKEAQEL 623
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M+ G PD+ T+ ++I CK G ++ V + S+
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + AG +A L+ +++ G P P + +I ++G +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G++P + + +
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539
Query: 194 GLKNCGK 200
L G+
Sbjct: 540 ALSREGR 546
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+GL G + A +++++M +G P ++ ++E C+SG V + ++ G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +++ A+ + G +DEA LL L G Y ++KG ++ D
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ PN + TLI R G F L +M+E G TP R + + DG+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 196 KNCGKHDLAEKI 207
G ++A +I
Sbjct: 297 CKEGHLEVANEI 308
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC---K 57
M KG +L++ + G ++ A ++ K+ G + D+ ++N++++ +C +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+VE E+ + ++ ++ T+ LI + + G+ + +L + E G P +
Sbjct: 232 WGDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
YA II G + G + A + + G PN Y T++ R+ EA L EM
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHD-LAEKIEQL 210
+ F+++ D G D + E +EQ+
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +++GL A ++++++M++ P++ TFN+LI +C++G E E+ + +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ Y +I + K G ++ A +L+ + G P Y ++KG ++ +
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339
Query: 134 AFCFFSEIKIKGHP-----------------------------------PNRPVYTTLIT 158
A SE+ K P P+ YTT+I
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ G EA L M+ G P + + +V GL + G+ AE++
Sbjct: 400 GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P ++++ +G ++ +++ M +G D N ++ IC+ G
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G AD+ +Y ++ + A + L+ +V P +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G F+ +++ G P+ +Y T+I + G A L M G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P C++ V GL + + AE++
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEEL 343
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
P + P+++G RG+ DA E+ KG P P+Y ++ R G F +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 173 LMEMTEMGLT 182
L M G T
Sbjct: 169 LEAMHAKGCT 178
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + +++GL +A + A++++++M ++ D TFN L++ C++G
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG G++ DA S++ +G PPN + TLI + G +A L +M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK + E +E L V
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTE--EALELLNV 521
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++GL +AG A++++++MI+QG P+ TFN+LI +CK G
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG +EA LL+ +V G +P +Y+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R G+ + F IK + +Y +I+ + A ++ M G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + ++ GL + G LA++ ++L
Sbjct: 597 CMPNESTYTMLIKGLASEG---LAKEAQEL 623
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M+ G PD+ T+ ++I CK G ++ V + S+
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + AG +A L+ +++ G P P + +I ++G +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G++P + + +
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539
Query: 194 GLKNCGK 200
L G+
Sbjct: 540 ALSREGR 546
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+GL G + A +++++M +G P ++ ++E C+SG V + ++ G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +++ A+ + G +DEA LL L G Y ++KG ++ D
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ PN + TLI R G F L +M+E G TP R + + DG+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 196 KNCGKHDLAEKI 207
G ++A +I
Sbjct: 297 CKEGHLEVANEI 308
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC---K 57
M KG +L++ + G ++ A ++ K+ G + D+ ++N++++ +C +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+VE E+ + ++ ++ T+ LI + + G+ + +L + E G P +
Sbjct: 232 WGDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
YA II G + G + A + + G PN Y T++ R+ EA L EM
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHD-LAEKIEQL 210
+ F+++ D G D + E +EQ+
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +++GL A ++++++M++ P++ TFN+LI +C++G E E+ + +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ Y +I + K G ++ A +L+ + G P Y ++KG ++ +
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339
Query: 134 AFCFFSEIKIKGHP-----------------------------------PNRPVYTTLIT 158
A SE+ K P P+ YTT+I
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ G EA L M+ G P + + +V GL + G+ AE++
Sbjct: 400 GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P ++++ +G ++ +++ M +G D N ++ IC+ G
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G AD+ +Y ++ + A + L+ +V P +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G F+ +++ G P+ +Y T+I + G A L M G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P C++ V GL + + AE++
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEEL 343
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
P + P+++G RG+ DA E+ KG P P+Y ++ R G F +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 173 LMEMTEMGLT 182
L M G T
Sbjct: 169 LEAMHAKGCT 178
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + L G A Q+ M+ +G PD T+N +I+ +CK+G
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI A + G++ EA +LL+ +V DG P Y
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTI 599
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG A+ +F ++ G PN Y LI R GR + A ++ EM E G
Sbjct: 600 LIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG 659
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + L+ DG NC + + A+ I
Sbjct: 660 LAPNKYTYTLLIDG--NCREGNWADAIR 685
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++++ GL G L+ AK + KM+ G PD T+ LI C+ G
Sbjct: 515 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGL 574
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G V TY ILI + G + A+ +++ G P Y
Sbjct: 575 LSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 634
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ A+ F E+ +G PN+ YT LI R G + +A EM + G
Sbjct: 635 LIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNG 694
Query: 181 LTP 183
+ P
Sbjct: 695 IPP 697
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + ++ GLL + +E+A+ +M G PDL T+NS++ CK+G
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGN 399
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G V TY LI + G ++EA RL +VE G P Y
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ + A FF E+ KG P+ Y T I G +A M G
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKG 519
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ P + ++++ DGL G A+ ++ VS
Sbjct: 520 IYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVS 552
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 1/173 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G L A++++N M+ G P + T+ LI T C+ G
Sbjct: 550 MVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGN 609
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G + TY +LI A+ + G A+ H ++E G P Y
Sbjct: 610 LYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTL 669
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+I G R G + DA + E+ G PP+ + L +G + A YL
Sbjct: 670 LIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGHMY-HAIEYL 721
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LL G+++ + + +M +G P L T+N++I + KS +VE + + +G
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY ++ KAG + EA LL +L G P Y +I G R G ++A
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
E+ +G P+ YT L+ + A + EM GL P CF
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP--DCF 490
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLE--TFNSLIETICKSGEVEFCV 65
P + + L+ L G + A ++ +M QG L T+N +I + + G +E
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA 300
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ S+ +L A TY LI A+ + G + + L + +G P Y II G
Sbjct: 301 KLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL 359
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ Q + A F+E++ G P+ Y +++ + G EA L ++ GL P
Sbjct: 360 LKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTV 419
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQ 209
++ + DG G + A ++++
Sbjct: 420 LTYNTLIDGYCRLGGLEEARRLKE 443
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + ++ G AG L+ A ++ + + G P + T+N+LI+ C+ G
Sbjct: 375 MRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGG 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G DV TY IL+ K + A ++ G P Y
Sbjct: 435 LEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G AF + +KG P+ Y +I + G +A + M+M G
Sbjct: 495 RICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDG 554
Query: 181 LTP 183
L P
Sbjct: 555 LQP 557
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ G A ++ A Q+ N+MI QG P+ ++N+LI C+ G+
Sbjct: 364 MITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ ++C G+ D+ TY IL+ K G + +AFRL + P +Y
Sbjct: 424 LREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTI 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G DA FSE+ ++G P+ +YTT+I + G EA M G
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543
Query: 181 LTPISRCFDLVTDGL 195
P ++++ GL
Sbjct: 544 CPPDEISYNVIIRGL 558
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + L+QGL + A ++N+M PD+ TFN L++T CK G+
Sbjct: 259 MKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGK 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + ++ ++G +V TY L+ S + EA +L H ++ G P Y
Sbjct: 319 VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNI 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A F+E+ +G PN Y TLI + G+ EA + M G
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG 438
Query: 181 LTPISRCFDLVTDGL 195
P + ++ DG
Sbjct: 439 NLPDLFTYSILLDGF 453
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + + + ++ ++ K+IK G P + TF +LI +CK GE
Sbjct: 123 GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQA 182
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE++ + G DV TY +I + K G A LL + E G P Y+ +I
Sbjct: 183 VELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDS 242
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R ++A FS +K KG P+ YT+LI + R+ EA+ L EMT + + P
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
Query: 185 SRCFDLVTDGLKNCGK 200
F+++ D GK
Sbjct: 303 IVTFNVLVDTFCKEGK 318
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ GL G A ++ + M+ +G PD+ T+N++I +CK GE
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAA 217
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G ++ TY LI ++ + +++EA + + G +P Y +I+G
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG 277
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ ++ +A +E+ P+ + L+ + G+ EA L MTEMG+ P
Sbjct: 278 LCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEP 336
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V L+ G + A+++ + MI +G P++ ++N LI CK+
Sbjct: 329 MTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKR 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + G + +Y LI + G + EA L N+ +G+ P Y+
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSI 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G AF F ++ PN +YT L+ + G +A E+ G
Sbjct: 449 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG 508
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + + + +GL C + L E +E
Sbjct: 509 LQPHVQLYTTIINGL--CKEGLLDEALE 534
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ L + A + + M +G PD+ T+ SLI+ +CK
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + L D+ T+ +L+ K G + EA +L + E G P Y+
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +A F + KG PN Y LI + R EA EM G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403
Query: 181 LTPISRCFDLVTDGLKNCGK 200
LTP + ++ + G GK
Sbjct: 404 LTPNNVSYNTLIHGFCQLGK 423
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ G GYL A ++ M P+L + L+ +CKSG
Sbjct: 434 MCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGN 493
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G V Y +I + K G++DEA N+ DG P Y
Sbjct: 494 HKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNV 553
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + A E++ +G
Sbjct: 554 IIRGLLQHKDESRALLLVGEMRDRG 578
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 1/181 (0%)
Query: 16 LVQGLLNAG-YLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+ ++ G Y + + +M G P++ T + + C+ V+ + V KL
Sbjct: 98 LLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKL 157
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + T+ LI + K G +A L ++V G P Y II G + G+ A
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAA 217
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+++ G PN Y+TLI R EA + M G++P + + G
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG 277
Query: 195 L 195
L
Sbjct: 278 L 278
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +++V L A L+ A+++VN+M G PD+ T+++L++ +CK G+++ ++
Sbjct: 337 PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDL 396
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G D T ++ A+SKAG +D A L + G P Y ++ G +
Sbjct: 397 LEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK 456
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A F +++ P+ YT +IT R G+ A EM + G+ P +
Sbjct: 457 AGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ + DGL G DLA +E L+ SL
Sbjct: 517 YHSLLDGLARNGLEDLA--LELLKTSL 541
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 6/212 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G +P V LV GL G L+ A ++ +M K+G PD T S++ + K+G+
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGK 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V++ + ++ GS D+ TY L+ + KAG IDEA L +V P Y
Sbjct: 425 VDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTI 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II R GQ A F E+ +G P+ +Y +L+ R G + +E+ +
Sbjct: 485 IITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG----LEDLALELLKTS 540
Query: 181 L-TPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
L P +V DGL GK D E +E++
Sbjct: 541 LCKPDFVMHKMVLDGLCKAGKAEDACEVVERM 572
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V L+ GL AG L+ A ++ +M+++ PDL + S + +CK+
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSK-----------------AGMIDEAFRLL 103
V + + GS AD + +I + K +GM+DEA +
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH---PPNRPVYTTLITMC 160
++ H P L+ +I + + D F +K PPN Y ++
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ + EA + EM GL+P + + DGL GK D A
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRA 393
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P ++++GL AG L+ AK+++ ++ + G ++ T++ +I+ CK+
Sbjct: 64 MQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR 123
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ +E++ ++ G C DV T+ L+ + + EAF L + + G P Y+
Sbjct: 124 VDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + G+ D+A + E+ K P+ YT+ +T + R EA + +M
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
Query: 180 GLTPISRCFDLV 191
G + F V
Sbjct: 244 GSKADAVAFSTV 255
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG+ V + + L A + A + +M ++G PD T++ ++ +CK+GE++
Sbjct: 32 KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN-PFPSLYAPII 122
E+ + + G +V TY ++I KA +D+A + + G P + ++
Sbjct: 92 AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLL 151
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
KG + +AF F + G PN Y+TL+ + GR EA EM E
Sbjct: 152 KGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 183 PISRCFDLVTDGLKNCGKHDLAE 205
P + GL C + +AE
Sbjct: 212 PDLVAYTSFVTGL--CKANRVAE 232
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSG 59
+ + G V +++ G A ++ A ++ M G PD+ TFNSL++ +C
Sbjct: 99 LRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGE 158
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ ++ + K G +V +Y L+ + KAG +DEA RL +VE P Y
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
+ G + + +A ++ KG + ++T+I + + G EA N ++E
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIE 274
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
++G + T+N ++ + K+ + E + + + G D TY I++ + KAG +D
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTL 156
+A LL L E G Y+ +I G + + DDA F + G P+ + +L
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ G R EA M + G P + + DGL G+ D A ++ +
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +++V L A L+ A+++VN+M G PD+ T+++L++ +CK G+++ ++
Sbjct: 337 PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDL 396
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G D T ++ A+SKAG +D A L + G P Y ++ G +
Sbjct: 397 LEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK 456
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A F +++ P+ YT +IT R G+ A EM + G+ P +
Sbjct: 457 AGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ + DGL G DLA +E L+ SL
Sbjct: 517 YHSLLDGLARNGLEDLA--LELLKTSL 541
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 6/212 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G +P V LV GL G L+ A ++ +M K+G PD T S++ + K+G+
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGK 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V++ + ++ GS D+ TY L+ + KAG IDEA L +V P Y
Sbjct: 425 VDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTI 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II R GQ A F E+ +G P+ +Y +L+ R G + +E+ +
Sbjct: 485 IITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG----LEDLALELLKTS 540
Query: 181 L-TPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
L P +V DGL GK D E +E++
Sbjct: 541 LCKPDFVMHKMVVDGLCKAGKAEDACEVVERM 572
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V L+ GL AG L+ A ++ +M+++ PDL + S + +CK+
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSK-----------------AGMIDEAFRLL 103
V + + GS AD + +I + K +GM+DEA +
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH---PPNRPVYTTLITMC 160
++ H P L+ +I + + D F +K PPN Y ++
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ + EA + EM GL+P + + DGL GK D A
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRA 393
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P ++++GL AG L+ AK+++ ++ + G ++ T++ +I+ CK+
Sbjct: 64 MQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR 123
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ +E++ ++ G C DV T+ L+ + + EAF L + + G P Y+
Sbjct: 124 VDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + G+ D+A + E+ K P+ YT+ +T + R EA + +M
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
Query: 180 GLTPISRCFDLV 191
G + F V
Sbjct: 244 GSKADAVAFSTV 255
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG+ V + + L A + A + +M ++G PD T++ ++ +CK+GE++
Sbjct: 32 KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN-PFPSLYAPII 122
E+ + + G +V TY ++I KA +D+A + + G P + ++
Sbjct: 92 AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLL 151
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
KG + +AF F + G PN Y+TL+ + GR EA EM E
Sbjct: 152 KGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 183 PISRCFDLVTDGLKNCGKHDLAE 205
P + GL C + +AE
Sbjct: 212 PDLVAYTSFVTGL--CKANRVAE 232
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSG 59
+ + G V +++ G A ++ A ++ M G PD+ TFNSL++ +C
Sbjct: 99 LRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGE 158
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ ++ + K G +V +Y L+ + KAG +DEA RL +VE P Y
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
+ G + + +A ++ KG + ++T+I + + G EA N ++E
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIE 274
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
++G + T+N ++ + K+ + E + + + G D TY I++ + KAG +D
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTL 156
+A LL L E G Y+ +I G + + DDA F + G P+ + +L
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ G R EA M + G P + + DGL G+ D A ++ +
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V +++ L +G A + +M+K+G PD ++SL++ + ++G + +E
Sbjct: 476 TPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALE 535
Query: 67 MY-YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ S+CK D +K+++ + KAG ++A ++ + + G Y +++G
Sbjct: 536 LLKTSLCK----PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGL 591
Query: 126 FRRGQFDDA 134
+ G+ D A
Sbjct: 592 RKLGKVDKA 600
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V +++ G ++ A ++ +M + P++ T+NSL++ +CKSG
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + G +++ TY ++ A+ K +D+A LL + E G P Y
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DDA F ++ +KG+ PN YT+LI G F E L +M + G
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++++ L ++D AEK+
Sbjct: 509 CIPNAITYEILIHSLFEKDENDKAEKL 535
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P V L+ G G L+ A + N+MI +P++ TF+ LI+ CK G+
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283
Query: 61 VE---------------------------FCV--------EMYYSVCKLGSCADVSTYKI 85
V +C+ ++ + + G DV +Y I
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I K M+DEA +L + P Y ++ G + G+ A E+ +G
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P N Y +++ + +A L ++ E G+ P + ++ +GL G+ D A+
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463
Query: 206 KI 207
K+
Sbjct: 464 KV 465
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +LL+ G+++ + + K++K+G PD TF LI+ +C GE
Sbjct: 84 MEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGE 143
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + V G D +Y LI + + G A +LL + P +Y+
Sbjct: 144 VHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYST 203
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + +DAF + E+ K P+ Y++LI+ G+ A + M
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN 263
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F ++ DG GK
Sbjct: 264 INPNVYTFSILIDGFCKEGK 283
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP ++ LL A ++A + +M G PD T N L+ + G ++F +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K G D T+ ILI + G + +A +V G Y +I G R
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A + K PN +Y+T+I + +A + EM ++P
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 188 FDLVTDGLKNCGKHDLA 204
+ + G GK A
Sbjct: 236 YSSLISGFCVVGKLKYA 252
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF L+ GL G ++A Q++ ++ + P++ ++++I+++CK V
Sbjct: 157 QGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVND 216
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++Y + DV TY LI G + A L + ++ D NP ++ +I
Sbjct: 217 AFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ +A + + K + Y +L+ + +A + M + G+TP
Sbjct: 277 GFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTP 336
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ +G D A K+
Sbjct: 337 DVWSYSIMINGFCKIKMVDEAMKL 360
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + + ++ + +++ A ++ K+ ++G PD+ T+ LI +CK G
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G ++ TY LI G DE +L + ++G P Y
Sbjct: 459 LDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEI 518
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I F + + D A E+ +G
Sbjct: 519 LIHSLFEKDENDKAEKLLREMIARG 543
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 3/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
+S +G +P ++ +LV+ L G L+ A+++ +M + G PD+ T+ ++I+ +C++
Sbjct: 166 LSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVHTYTAMIKALCRA 224
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GE++ M + + G V TY +L+ A+ K+G ++EAFRL +VE P +
Sbjct: 225 GEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTF 284
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G R QF + E++ G PN +Y +I R G EA EM
Sbjct: 285 GILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVS 344
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ ++L+ L G+ + AEKI
Sbjct: 345 KGIKQTVVTYNLIAKALCKEGEMEHAEKI 373
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + ++ + N G +E ++++M +G PD+ T+ ++I+ CK+ +
Sbjct: 518 MIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + K G + Y LI + G I +A +L + +G P P Y
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637
Query: 121 -----------------------------------IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + G+ D+A +F E+ +G
Sbjct: 638 LMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRG 697
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
PPN+ YTTL+ + G EA+ EM +G+ P S ++ + G
Sbjct: 698 IPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++QG A ++ A Q+ + MIK+G PDL TFN + T C G+VE + + +
Sbjct: 496 NIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKS 555
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY +I KA + +A L L+++G P +Y +I G R G D
Sbjct: 556 EGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISD 615
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLI-TMCGRG 163
A +K G P Y +L+ MC G
Sbjct: 616 AIGILDTMKYNGIQPTPVTYNSLMYWMCHAG 646
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V + L+ GL ++ A +++ M+ G + D T+N +I+ CK+ +++
Sbjct: 451 KGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDE 510
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + K G D+ T+ I + G ++E LL + +G P Y II
Sbjct: 511 AIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIID 570
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + A + +E+ G PN +Y LI GR G +A L M G+ P
Sbjct: 571 GYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQP 630
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 1/205 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P V +++ L AG +++A M+ ++ + G P + T+N L++ +CKSG VE
Sbjct: 205 KTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEE 264
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + T+ ILI +++ E +L + G P +Y +I
Sbjct: 265 AFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIG 324
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
R+G +A F E+ KG Y + + G A L EM G+
Sbjct: 325 WHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384
Query: 184 ISRCFD-LVTDGLKNCGKHDLAEKI 207
F+ +V L+ G+ DL ++
Sbjct: 385 HCSLFNSVVAWHLRGTGRLDLVLRL 409
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
+Q L +G E A ++ +++ +G ++ T N+LI +C+ ++ ++ ++ G
Sbjct: 429 IQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV 488
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
D TY I+I KA +DEA +L ++++ G P + + G+ ++
Sbjct: 489 ELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILH 548
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
++K +G P+ Y T+I + +A YL E+ + GL P + ++ + G
Sbjct: 549 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGG 606
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 2/191 (1%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G L+ +++ +M+ + P+ + I+ +CKSG+ E E+++ V G +
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V+T LI + + + EA ++L +V G Y +I+G + + D+A
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
++ +G P+ + + G+ E + L +M GL P + + DG C
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY--CK 574
Query: 200 KHDLAEKIEQL 210
D+ + E L
Sbjct: 575 AKDMHKANEYL 585
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 3/217 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + +L+ GL ++ +M G P+ +N +I C+ G
Sbjct: 272 MVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGH 331
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++++ + G V TY ++ A+ K G ++ A ++L ++ G SL+
Sbjct: 332 CSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNS 391
Query: 121 IIKGAFR-RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ R G+ D E+ + PN + T I + G+ EAA ++
Sbjct: 392 VVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGK 451
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
GL + + GL C +++ E + L+ + S
Sbjct: 452 GLGVNVATSNALIHGL--CQGNNMKEATKVLKAMVNS 486
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 5/219 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G +E A + + KM +G PD+ T+N+L+ +CK G+
Sbjct: 215 MPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGK 274
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ VE+ + G + TY +I +SK G D+A +LL + G P Y+
Sbjct: 275 VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSS 334
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ D+A FF ++++ G PN Y ++ + + A ++L M + G
Sbjct: 335 LVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRG 394
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL--EVSLRSV 217
P + ++ +GL G LA++ +L E+ LR V
Sbjct: 395 CKPTEASYTILIEGLAYEG---LAKEALELLNELCLRGV 430
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V ++L+ L G L A ++ KM K G P+ ++N L+ CK +
Sbjct: 180 MVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKK 239
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E + G D+ TY L+ A+ K G +D A LL+ L G +P Y
Sbjct: 240 MERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 299
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A E++ KG P+ Y++L+ R G+ EA + ++ +G
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ + GL K D A
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRA 383
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G G A +++ + G+ PD+ T+N LI +C +G ++ + + G
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V T+ ILI + + G++ A +L + + G P Y P++ G + + + A
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ +G P+ Y TL+T + G+ A L +++ G +P+ ++ V DGL
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Query: 196 KNCGKHDLAEKI 207
GK D A K+
Sbjct: 305 SKVGKTDQAAKL 316
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G A ++ AKQ+ N+MI QGS P+ ++N+LI +C+ G
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ ++ G+ ++ TY IL+ K G + +AFRL + P +Y
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNI 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G DA FSE+ + G PN +YTT+I + G EA M + G
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG 425
Query: 181 LTPISRCFDLVTDGL 195
P ++++ G
Sbjct: 426 CPPDEFSYNVIIRGF 440
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P + L+QGL N + A ++N+M P++ TFN L++T CK G+
Sbjct: 141 MKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGK 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ ++G DV TY L+ S + EA +L ++ G P Y+
Sbjct: 201 VLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSI 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A F+E+ +G PN Y TLI + GR EA + M G
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG 320
Query: 181 LTPISRCFDLVTDGL 195
P + ++ DG
Sbjct: 321 NLPNLYTYAILLDGF 335
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V + L+ G + A+++ + MI +G PD+ +++ LI CK+
Sbjct: 211 MTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKR 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + GS + +Y LI + + G + EA L N+ +G+ P YA
Sbjct: 271 IDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAI 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G AF F ++ PN +Y L+ + G +A E+ +G
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + + + +GL C + L E +E
Sbjct: 391 LQPNVQIYTTIINGL--CKEGLLDEALE 416
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ GL G A ++ + M+ +G PD T+ ++I +CK GE
Sbjct: 40 GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA 99
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G +V TY LI ++ K ++EA + + +P Y +I+G
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQG 159
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +A +E+ PN + L+ + G+ + A L MTEMG+ P
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ P V ++LV G + +A+ ++ M + G +PD+ T+NSL+ E
Sbjct: 176 MTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTE 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + G DV +Y ILI KA IDEA +L + ++ G P Y
Sbjct: 236 VVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNT 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + G+ PN Y L+ + G +A M
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++++ + + G
Sbjct: 356 LKPNLVMYNILVNAMCKSGN 375
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++L+ ++ ++ K IK G P + TF +LI + K G+
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE++ + G D TY +I + K G A L + E G Y+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + ++A FS +K K P YT+LI R+ EA+ L EMT +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F+++ D GK AE +
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGV 207
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ G GYL A ++ M P+L +N L+ +CKSG
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + +G +V Y +I + K G++DEA N+ +DG P Y
Sbjct: 376 LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + A E++ +G
Sbjct: 436 IIRGFLQHKDESRAVHLIGEMRDRG 460
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 81/207 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G V L+ L + A + + M + P + T+ SLI+ +C
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + L +V T+ +L+ K G + A +L + E G P Y
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + +A F + KG P+ Y+ LI + R EA EM G
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
TP + ++ + GL G+ A+ +
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDL 312
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G NP ++ ++L+ G ++A + +M + P++ T+NSLI+ +CKSG+
Sbjct: 280 MAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGK 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D+ TY L+ A+ K D+A LL L + G P Y
Sbjct: 340 ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTI 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +DA F ++ +KG+ N YT +I + G F EA L +M E G
Sbjct: 400 LINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENG 459
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++++ L + ++D AEK+
Sbjct: 460 CIPNAVTYEIIIRSLFDKDENDKAEKL 486
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ L + A ++ K+ QG P++ T+ LI +CK G
Sbjct: 350 MHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGR 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + G +V+TY ++I GM EA +L + E+G P Y
Sbjct: 410 PEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEI 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+ F + + D A E+ +G
Sbjct: 470 IIRSLFDKDENDKAEKLLLEMITRG 494
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 52 IETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH 111
+ T CK G+V+ ++ ++ K G +V TY L+ +++A + +N+ + G
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 112 NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN 171
NP Y +I G + D A F E+ + PN Y +LI + G+ A
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ EM + G P + + D L C H
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDAL--CKNH 373
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P V + L+ GL N G + A M +KM+ G P+L T+N+LI CK+
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++M+ SV G+ Y +LI A K G ID+ F L + +G P Y
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G + A F ++ KG P + + C R G +AA L EM++MG
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYC-RKGESRKAAMLLKEMSKMG 500
Query: 181 LTPISRCFDLVTDG 194
L P +++V G
Sbjct: 501 LKPRHLTYNIVMKG 514
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + ++L+ G L + ++ +M+ Q P++ ++NSLI +C G+
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M + G ++ TY LI K M+ EA + ++ G P +Y
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DD F E++ +G P+ Y LI R G A ++T G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 181 LTPISRCFDLVTDG 194
L P F ++ +G
Sbjct: 467 L-PDLVTFHILMEG 479
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ GL G +E+AK++ +++ +G PDL TF+ L+E C+ GE
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP-SLYA 119
+ + K+G TY I++ K G + A + + ++ + Y
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
+++G ++G+ +DA +E+ KG PNR Y
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Query: 5 GFNPPVRGRDLLVQG---LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
G +P V + L+ G L G + A ++ +M++ P+L TFN LI+ K +
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++++ + +V +Y LI + G I EA + +V G P Y +
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + +A F +K +G P +Y LI + G+ + EM G+
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL G + A+K+
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKL 458
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 5/196 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LL + + +MI++ P++ TFN +I +CK+G++ ++ + G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFR---LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+V +Y LI K G + ++ +L +VE+ +P + + +I G ++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+ F E+ + PN Y +LI GG+ EA + +M G+ P ++ +
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 193 DGLKNCGKHDLAEKIE 208
+G C L E ++
Sbjct: 374 NGF--CKNDMLKEALD 387
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M + P V ++++ L G + A+ ++ M G P++ ++N+LI+ CK
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+G++ + + + +++T+ ILI K + + ++ +++ P
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G G+ +A ++ G PN Y LI + EA + +
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHD----LAEKIEQ 209
G P +R ++++ D GK D L E++E+
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 1/208 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P + + L+ GLL A E A + KM G PD+ T+N ++ + KSG+++ +
Sbjct: 785 TPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFD 844
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+Y + G + T+ I+I + K+ +D+A L ++L+ +P P Y P+I G
Sbjct: 845 LYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL 904
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A FF E+ G PN P+Y L+ G+ G A M + G+ P +
Sbjct: 905 KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964
Query: 187 CFDLVTDGLKNCGKHDLA-EKIEQLEVS 213
+ ++ D L GK D A E+L++S
Sbjct: 965 SYSIMVDCLCMVGKVDDALHYFEELKLS 992
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F+P L+ GLL G LE AKQ +M+ G P+ +N L+ K G+VE
Sbjct: 889 FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETAC 948
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E++ + K G D+ +Y I++ + G +D+A L G +P Y +I G
Sbjct: 949 ELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGL 1008
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
R + ++A F E++ +G P+ Y LI G G EA E+ GL P
Sbjct: 1009 GRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNV 1068
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
++ + G G D A +
Sbjct: 1069 FTYNALIRGHSMSGNPDRAYAV 1090
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +L+ L NAG L +AK++ KM PD T+ +L++ G+
Sbjct: 288 MDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGD 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + G DV T+ ILI A+ K G +DEAF L + + G P Y
Sbjct: 348 LDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNT 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + D+A F+ ++ G Y I G+ G +A +M G
Sbjct: 408 LICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNG 467
Query: 181 LTP 183
+ P
Sbjct: 468 IVP 470
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LL +G+ A ++ +M+ +G P L+T+++L+ + K ++E + + + LG
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLG 257
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ T+ I I + +AG IDEA+ +L + + G P Y +I G+ ++A
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAK 317
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K H P+R Y TL+ G + EM G P F ++ D L
Sbjct: 318 ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDAL 377
Query: 196 KNCGKHDLA 204
GK D A
Sbjct: 378 CKVGKVDEA 386
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P ++++ GL+ + L+ A + ++ P T+ LI+ + K G +E
Sbjct: 852 RGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEE 911
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G + Y IL+ K G ++ A L +V++G P Y+ ++
Sbjct: 912 AKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVD 971
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ DDA +F E+K+ G P+ Y +I GR R EA + EM G+TP
Sbjct: 972 CLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITP 1031
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + KM G P++ N+ + ++ + G +E E + + K G D TY IL+
Sbjct: 456 AIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMR 515
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
KAG +D+A +LL + E+G +P + +I ++ + D+A+ F +K P
Sbjct: 516 CYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAP 575
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y TL+ G+ GR EA M P + F+ + D L G+ DLA K+
Sbjct: 576 TVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKM 634
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P V +L+ L G ++ A ++ M KQG P+L T+N+LI + +
Sbjct: 358 MEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNR 417
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ S+ LG TY + I K+G +A + + +G P
Sbjct: 418 LDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNA 477
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ +G+ ++A FF+ +K G P+ Y L+ G+ GR +A L EM E G
Sbjct: 478 SLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG 537
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + D L + D A K+ Q
Sbjct: 538 CDPEVVIINSLIDTLYKADRVDEAWKMFQ 566
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + + L G LE AK+ N + K G PD T+N L+ K+G
Sbjct: 463 MKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGR 522
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + G +V LI + KA +DEA+++ + E P Y
Sbjct: 523 VDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNT 582
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A F + PPN + TL+ + G A L MTEM
Sbjct: 583 LLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMN 642
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 643 CFPDVLTYNTVIYGL 657
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + ++ L AG ++ A ++ +M G PD+ T+ LI+ +C +G+
Sbjct: 253 MESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGK 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + D TY L+ S G +D + DG+ P +
Sbjct: 313 LNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTI 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+AF +K +G PN Y TLI R R EA M +G
Sbjct: 373 LIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLG 432
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
L + + L D G+ A K
Sbjct: 433 LETTAYTYILFIDYYGKSGESGKAIK 458
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L+ L +E+ ++ +M G P++ TF I + ++G+
Sbjct: 218 MVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGK 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G DV TY +LI A+ AG ++ A L + H P Y
Sbjct: 278 IDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYIT 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G D F+SE++ G+ P+ +T LI + G+ EA L M + G
Sbjct: 338 LLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQG 397
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++ + GL + D A
Sbjct: 398 VAPNLHTYNTLICGLLRLNRLDEA 421
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++L+ G G +E+A ++ +M+K+G PDL++++ +++ +C G+
Sbjct: 919 MLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGK 978
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D+ Y ++I + ++ ++EA L + G P Y
Sbjct: 979 VDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNA 1038
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G ++A + E+++KG PN Y LI
Sbjct: 1039 LILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALI 1075
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ ++V L G ++ A ++ G DPDL +N +I + +S
Sbjct: 954 MVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQR 1013
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++ + G D+ TY LI + AGM++EA ++ L G P Y
Sbjct: 1014 VEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNA 1073
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G G D A+ + ++ + G PN + L
Sbjct: 1074 LIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V + L+ GL G ++ A + MI P+ +FN+L++ +CK+GE
Sbjct: 568 MKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGE 627
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++M + + ++ DV TY +I + K ++ AF L H + + + + +L
Sbjct: 628 VDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTL-CT 686
Query: 121 IIKGAFRRGQFDDAF 135
++ G + G+ +DAF
Sbjct: 687 LLPGVIKDGRIEDAF 701
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+E + N M KQ + T+ ++ + + G + + K+G + +Y
Sbjct: 138 VEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIG 197
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + K+G EA ++ +V +G P Y+ ++ +R + E++ G
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLG 257
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN +T I + GR G+ EA L M + G P + ++ D L N GK + A+
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAK 317
Query: 206 KI 207
++
Sbjct: 318 EL 319
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V + L+ L A ++ A +M +M + P + T+N+L+ + K G
Sbjct: 533 MEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGR 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V+ ++ + + ++ L+ + K G +D A ++L + E N FP + Y
Sbjct: 593 VQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTE--MNCFPDVLTY 650
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+I G + + + AF F ++K + +Y +T+C
Sbjct: 651 NTVIYGLIKENRVNYAFWLFHQMK-------KVIYPDYVTLC 685
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+K P V + ++ G A ++ A +++++M K+G +PD+ T+N LI C G ++
Sbjct: 139 EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLD 198
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + K V TY ILI A G IDEA +LL ++ G P Y ++
Sbjct: 199 LALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVV 258
Query: 123 KGAFRRGQFDDAFCFFSEIK-----------------------------------IKGHP 147
G + G D AF F S I +KG
Sbjct: 259 NGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCE 318
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN Y+TLIT R G+ EA N L M E L P +D + L GK DLA
Sbjct: 319 PNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLA 375
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ P V L++G N +E A Q++ + K G PD+ +N++I CK+
Sbjct: 103 MVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK-PDVFAYNAVISGFCKADR 161
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + K G DV TY ILI G +D A R++ L++D P Y
Sbjct: 162 VDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTI 221
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ +G D+A E+ +G P+R Y ++ + G A +L +++ G
Sbjct: 222 LIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNG 281
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++++ L N GK + EK+
Sbjct: 282 CVAGVSTYNILLRDLLNEGKWEYGEKL 308
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G V ++L++ LLN G E +++++ M+ +G +P+ T+++LI +C+ G+
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGK 336
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + D +Y LI A+ + G +D A L +++ GH P Y
Sbjct: 337 IDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNS 396
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + G D+A F ++ G PPN Y TL G + A ++EM G
Sbjct: 397 ILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNG 456
Query: 181 LTP 183
+ P
Sbjct: 457 IDP 459
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ + G ++ A +++++M+ +G PD T+N ++ +CK G ++ E
Sbjct: 214 PTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEF 273
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G A VSTY IL+ + G + +L+ +++ G P P Y+ +I R
Sbjct: 274 LSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCR 333
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A +K K P+ Y LI+ R G+ A +L +M G P
Sbjct: 334 DGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILS 393
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + L G D A I
Sbjct: 394 YNSILASLCKNGNADEALNI 413
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 1 MSD---KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK 57
MSD KG P L+ L G ++ AK ++ M ++ PD +++ LI +C+
Sbjct: 309 MSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCR 368
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+V+ +E + G D+ +Y ++ ++ K G DEA + L E G P
Sbjct: 369 EGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGS 428
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y + + G A E+ G P+ Y +LI+ R G +A L++M
Sbjct: 429 YNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMF 488
Query: 178 E 178
E
Sbjct: 489 E 489
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 41/216 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P D L+ L G ++ A + ++ MI G PD+ ++NS++ ++CK+G
Sbjct: 347 MKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGN 406
Query: 61 VEFCVEMYYSVCKLGSCA------------------------------------DVSTYK 84
+ + ++ + ++G C D TY
Sbjct: 407 ADEALNIFEKLGEVG-CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYN 465
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI + + G++D+A LL ++ E P Y ++ G + + DA + +
Sbjct: 466 SLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVN 525
Query: 144 KGHPPNRPVYTTLITMCG-RGGRF--VEAANYLMEM 176
+G PN YT LI G G R+ +E AN L+ M
Sbjct: 526 EGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNM 561
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+ DE+ L ++V G+ P L +IKG F + + A EI K P+
Sbjct: 89 KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDVF 147
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y +I+ + R A+ L M + G P ++++ G+ DLA ++
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P + +++V GL G LE A +++ KM+ G PD T+ S+I ++G
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++Y + G V TY +LI + G ++ AF + E G P Y
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A+ FF+E+ KG PN+ YT LI G + EA + +M + G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ P S + LK GK + + QLE L S
Sbjct: 685 VQPDSCTHSAL---LKQLGKDCKLQAVRQLESLLDS 717
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
+ G L G A + +M+ +G PDL +N +++ +CK G +E E+ + G
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
D TY +I A + G + + + + ++ G P Y +I G +G+ + AF
Sbjct: 546 IPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFI 605
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+FSE++ KG PN Y +LI + R +A N+ EM E G+ P + ++ + +
Sbjct: 606 YFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN--E 663
Query: 197 NCGKHDLAEKI 207
NC + E +
Sbjct: 664 NCNMGNWQEAL 674
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 94/232 (40%), Gaps = 35/232 (15%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV----EF 63
P + + L+ GL G LE A+Q+ +MI +G PD+ T+ L+ CK G + EF
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 64 CVEMYYSVCKLGSCA-------------------------------DVSTYKILIPAVSK 92
EM + +L S A D+ Y +++ + K
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G ++EA LL +V DG P Y II G+ F E+ KG P+
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
YT LI GR A Y EM E G+ P ++ + +GL + D A
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQA 638
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +P V+ + +++ L + + A ++ M + G P + T+N+L+++ CK G+
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + G + TY +LI +SK G ++A L+ +++ G Y P
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F +G +A E+ +KG P Y + I + GR +A L +M
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369
Query: 181 LTP 183
L P
Sbjct: 370 LLP 372
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G ++ ++++M ++G P+ T+N LI + K GE
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + K G TY LI GM+ EA L +V G +P + Y
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G+ DA S++ P+ Y TLI R G ++A E+ +
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P ++ + DGL G+ ++A++++
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLK 432
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ G G L A + +++ P + T+N+L++ +C+ GE+E ++
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D+ TY IL+ K G + A ++ +G YA I G +
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G AF E+ KG PP+ +Y ++ + G EA+ L +M G+ P
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP 547
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++L+ GL G E AK ++ +M+K G T+N LI G
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G+ V+TY I + K G + +A + L +++ + P Y
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF F E++ P Y TL+ R G A +EM G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ P + ++ +G G +A++
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQE 465
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V + + GL G + A Q ++ M+ PD+ ++N+LI C+ G
Sbjct: 330 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + + TY L+ + + G ++ A +L ++ +G P Y
Sbjct: 390 LMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ + G A FF E+ +G + Y T I + G A + EM G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P +++V DGL G + A ++ Q VS
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVS 542
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V+ DLL+ +E + +KMIK PD++ N ++ + + VE+Y
Sbjct: 164 VKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYR 223
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
++ + G + TY L+ + K G + + LL
Sbjct: 224 TMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLL-------------------------- 257
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
SE++ +G PN Y LI + G F +A + EM + GL + ++
Sbjct: 258 ---------SEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYN 308
Query: 190 LVTDGLKNCGKHDLAEKIEQLE 211
+ G N G LAE + E
Sbjct: 309 PLIYGYFNKGM--LAEALSLQE 328
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 2/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V+ + GLL G ++ A ++ +++ ++G PD+ T++SLI CK GEVE
Sbjct: 320 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 379
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ +C G ++ Y L+ + K+G I A +L + E G P Y+ +I G
Sbjct: 380 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 439
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +AF F E+ KG P+ VY L+ C + G +A N EM + G
Sbjct: 440 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT- 498
Query: 185 SRCFDLVTDGL-KNCGKHDLAEKIEQL 210
+ F+ + DG K+C + ++ +++
Sbjct: 499 TLSFNTLIDGYCKSCKIQEASQLFQEM 525
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG P V L+ G G +E A ++ ++M +G P++ +N+L++ +CKSG+
Sbjct: 351 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 410
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G D TY +I K+ + EAF L H + G P +Y
Sbjct: 411 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 470
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G + A F E+ KG + TLI + + EA+ EM
Sbjct: 471 LVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQ 529
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + V D GK + A
Sbjct: 530 IMPDHVTYTTVIDWHCKAGKMEEA 553
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V L+ G + G +E A+++++ M G PD+ +N++I + K+G+
Sbjct: 176 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + G D T+ I SK G + EA + +++ G P LY
Sbjct: 236 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G +A F + G P+ + I + GR EA E+ E G
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355
Query: 181 LTP 183
L P
Sbjct: 356 LVP 358
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 1/198 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P ++ GL + L A +++ KM G P++ +++LI G
Sbjct: 141 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D+ Y +I +SKAG ++EA L + G P +
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G+ +A +F E+ G PN P+YT LI + G +EA + + +G
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320
Query: 181 LTP-ISRCFDLVTDGLKN 197
+ P + C + LKN
Sbjct: 321 VLPDVQTCSAFIHGLLKN 338
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 2/202 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + G G + A + ++M+ G P+ + LI K+G +
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ + LG DV T I + K G + EA ++ L E G P Y+ +I
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G+ + AF E+ +KG PN +Y L+ + G A M E GL P
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428
Query: 184 ISRCFDLVTDGLKNCGKHDLAE 205
S + + DG C ++AE
Sbjct: 429 DSVTYSTMIDGY--CKSENVAE 448
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P +L+ G AG L A + + G PD++T ++ I + K+G
Sbjct: 281 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + + G DV TY LI K G +++AF L + G P +Y
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G A F + KG P+ Y+T+I + EA + EM G
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 181 LTPISRCFDLVTDG 194
+ P S ++ + G
Sbjct: 461 VQPHSFVYNALVHG 474
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ GL G +E A +++ MI G P+ TF LIE C+ + +E+ + K
Sbjct: 84 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 143
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+Y +I + + A +LL + G P +Y+ +I G G+ ++
Sbjct: 144 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEE 203
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + G P+ Y +I+ + G+ EA+ YL+E+ GL P + F
Sbjct: 204 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 263
Query: 194 GLKNCGKHDLAEK 206
G GK A K
Sbjct: 264 GYSKTGKMTEAAK 276
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P R LL++G + A +++++M K+ P ++ ++I +C ++
Sbjct: 110 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 169
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G +V Y LI + G I+EA RLL + G P Y II
Sbjct: 170 NKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 229
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ ++A + EI+ +G P+ + I + G+ EAA Y EM + GL P
Sbjct: 230 LSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPN 289
Query: 185 SRCFDLVTDG 194
+ + ++ +G
Sbjct: 290 NPLYTVLING 299
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G + G ++ ++ + M+ G +L T+N LI +CK G+
Sbjct: 36 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + LG + T+ +LI + + A LL + + P Y
Sbjct: 96 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G A ++ G PN VY+TLI GR EA L M+ G
Sbjct: 156 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 215
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P C++ + L GK + A
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEA 239
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + LV G G +E A + +M+++G L +FN+LI+ CKS +
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCK 514
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA-----------------FRLL 103
++ +++ + D TY +I KAG ++EA F L
Sbjct: 515 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALF 574
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+V G P Y +I + +AF E+ KG ++ LIT +
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 634
Query: 164 GRFVEAANYLMEMTEMGLTP-ISRCFDLVTDGLKNCGKHDLAEKI 207
EA+ L EM E+GL P ++ C LV GK D A ++
Sbjct: 635 EDLTEASKLLDEMGELGLKPSLAACSTLVRS-FHEAGKMDEATRV 678
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 19/228 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF + + L+ G + ++ A Q+ +MI + PD T+ ++I+ CK+G+
Sbjct: 491 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 549
Query: 61 VE-----------------FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
+E ++ + G D TY ++I A K + EAF+L
Sbjct: 550 MEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 609
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+V G +++ +I +R +A E+ G P+ +TL+
Sbjct: 610 DEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEA 669
Query: 164 GRFVEAANYLMEMTEMGLTP-ISRCFDLVTDGLKNCGKHDLAEKIEQL 210
G+ EA + +GL P + DLV L + D I+QL
Sbjct: 670 GKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 2/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V+ + GLL G ++ A ++ +++ ++G PD+ T++SLI CK GEVE
Sbjct: 519 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 578
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ +C G ++ Y L+ + K+G I A +L + E G P Y+ +I G
Sbjct: 579 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +AF F E+ KG P+ VY L+ C + G +A N EM + G
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT- 697
Query: 185 SRCFDLVTDGL-KNCGKHDLAEKIEQL 210
+ F+ + DG K+C + ++ +++
Sbjct: 698 TLSFNTLIDGYCKSCKIQEASQLFQEM 724
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG P V L+ G G +E A ++ ++M +G P++ +N+L++ +CKSG+
Sbjct: 550 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 609
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G D TY +I K+ + EAF L H + G P +Y
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G + A F E+ KG + TLI + + EA+ EM
Sbjct: 670 LVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQ 728
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + V D GK + A
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEA 752
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V L+ G + G +E A+++++ M G PD+ +N++I + K+G+
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + G D T+ I SK G + EA + +++ G P LY
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G +A F + G P+ + I + GR EA E+ E G
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554
Query: 181 LTP 183
L P
Sbjct: 555 LVP 557
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 1/198 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P ++ GL + L A +++ KM G P++ +++LI G
Sbjct: 340 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D+ Y +I +SKAG ++EA L + G P +
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G+ +A +F E+ G PN P+YT LI + G +EA + + +G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519
Query: 181 LTP-ISRCFDLVTDGLKN 197
+ P + C + LKN
Sbjct: 520 VLPDVQTCSAFIHGLLKN 537
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 2/202 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + G G + A + ++M+ G P+ + LI K+G +
Sbjct: 448 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 507
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ + LG DV T I + K G + EA ++ L E G P Y+ +I
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 567
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G+ + AF E+ +KG PN +Y L+ + G A M E GL P
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 627
Query: 184 ISRCFDLVTDGLKNCGKHDLAE 205
S + + DG C ++AE
Sbjct: 628 DSVTYSTMIDGY--CKSENVAE 647
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 3/208 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF + + L+ G + ++ A Q+ +MI + PD T+ ++I+ CK+G+
Sbjct: 690 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 748
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + D TY L+ +K G E F L +V G P Y
Sbjct: 749 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 808
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + +AF E+ KG ++ LIT + EA+ L EM E+G
Sbjct: 809 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 868
Query: 181 LTP-ISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ C LV GK D A ++
Sbjct: 869 LKPSLAACSTLVR-SFHEAGKMDEATRV 895
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P +L+ G AG L A + + G PD++T ++ I + K+G
Sbjct: 480 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + + G DV TY LI K G +++AF L + G P +Y
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G A F + KG P+ Y+T+I + EA + EM G
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 181 LTPISRCFDLVTDG 194
+ P S ++ + G
Sbjct: 660 VQPHSFVYNALVHG 673
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ GL G +E A +++ MI G P+ TF LIE C+ + +E+ + K
Sbjct: 283 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 342
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+Y +I + + A +LL + G P +Y+ +I G G+ ++
Sbjct: 343 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEE 402
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + G P+ Y +I+ + G+ EA+ YL+E+ GL P + F
Sbjct: 403 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 462
Query: 194 GLKNCGKHDLAEK 206
G GK A K
Sbjct: 463 GYSKTGKMTEAAK 475
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P R LL++G + A +++++M K+ P ++ ++I +C ++
Sbjct: 309 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 368
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G +V Y LI + G I+EA RLL + G P Y II
Sbjct: 369 NKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 428
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ ++A + EI+ +G P+ + I + G+ EAA Y EM + GL P
Sbjct: 429 LSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPN 488
Query: 185 SRCFDLVTDG 194
+ + ++ +G
Sbjct: 489 NPLYTVLING 498
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G + G ++ ++ + M+ G +L T+N LI +CK G+
Sbjct: 235 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + LG + T+ +LI + + A LL + + P Y
Sbjct: 295 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 354
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G A ++ G PN VY+TLI GR EA L M+ G
Sbjct: 355 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P C++ + L GK + A
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEA 438
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ KM+ +G PD T+ +I CK + ++ V G + + +LI A+
Sbjct: 790 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 849
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K + EA +LL + E G P + + +++ G+ D+A F +K G P+
Sbjct: 850 KREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT- 908
Query: 152 VYTTLITM 159
TTLI +
Sbjct: 909 --TTLIDL 914
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 107/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G NP ++ +++ G + A + +M ++ PD+ T++SLI+ + KSG
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G ++ TY ++ A+ K +D+A LL + G P S Y+
Sbjct: 416 ISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G+ +DA F ++ +KG+ + YT +I G F EA L +M + G
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ ++++ L ++D+AEK+
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKL 562
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ G G L+ A + NKMI + PD+ TFN L+ CK G+
Sbjct: 251 MVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G + TY L+ +++A + + + + G NP Y+
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +FD+A F E+ K P+ Y++LI + GR A + +M + G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P ++ + D L C H + + I L
Sbjct: 431 VPPNICTYNSILDAL--CKTHQVDKAIALL 458
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+ GL +G + A Q+V++M +G P++ T+NS+++ +CK+ +
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + G D+STY ILI + ++G +++A ++ +L+ G+N Y
Sbjct: 451 VDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTI 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G F++A S+++ G P+ Y +I + A L EM G
Sbjct: 511 MIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Query: 181 L 181
L
Sbjct: 571 L 571
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++LV G ++ K + + M+KQG P+ T+NSL++ C EV +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ + G D+ +Y I+I K DEA L + P Y+ +I G +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A ++ +G PPN Y +++ + + +A L + + G P
Sbjct: 413 SGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIST 472
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ ++ GL GK + A K+
Sbjct: 473 YSILIKGLCQSGKLEDARKV 492
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++L+ G + A + K++K G PD TF +L + +C G+
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + V LG D +Y LI + K G A LL + + P +Y
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + ++AF FSE+ KG P+ Y+ LI+ G+ +A + +M
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+++ + GK
Sbjct: 291 IKPDVYTFNILVNAFCKDGK 310
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + ++ L ++ A ++ K +G PD+ T++ LI+ +C+SG+
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G DV Y I+I G+ +EA LL + ++G P Y
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN-RPVYTTLITMCGRG 163
II F++ + D A E+ +G P N +Y T + G
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGLPLNFYDLYLTRLAQTWHG 589
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP + ++ L+ + + + + KM +G P+L N LI C+ G + F +
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K+G D T+ L + G I +AF +V G + Y +I G +
Sbjct: 143 FAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A + PN +Y T+I + EA + EM G++P
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVT 262
Query: 188 FDLVTDGLKNCGK 200
+ + G GK
Sbjct: 263 YSALISGFCILGK 275
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 80/189 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +A ++ ++ P++ +N++I+++CK V +++ + G
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKG 255
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI G + +A L + ++ + P + ++ + G+ +
Sbjct: 256 ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + +G PN Y +L+ +A + M + G+ P + + ++ +G
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375
Query: 196 KNCGKHDLA 204
K D A
Sbjct: 376 CKIKKFDEA 384
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 2/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V+ + GLL G ++ A ++ +++ ++G PD+ T++SLI CK GEVE
Sbjct: 608 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 667
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ +C G ++ Y L+ + K+G I A +L + E G P Y+ +I G
Sbjct: 668 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 727
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +AF F E+ KG P+ VY L+ C + G +A N EM + G
Sbjct: 728 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT- 786
Query: 185 SRCFDLVTDGL-KNCGKHDLAEKIEQL 210
+ F+ + DG K+C + ++ +++
Sbjct: 787 TLSFNTLIDGYCKSCKIQEASQLFQEM 813
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG P V L+ G G +E A ++ ++M +G P++ +N+L++ +CKSG+
Sbjct: 639 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 698
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G D TY +I K+ + EAF L H + G P +Y
Sbjct: 699 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 758
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G + A F E+ KG + TLI + + EA+ EM
Sbjct: 759 LVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQ 817
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + V D GK + A
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEA 841
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V +L+ + G +E A+++++ M G PD+ +N++I + K+G+
Sbjct: 464 MTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 523
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + G D T+ I SK G + EA + +++ G P LY
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G +A F + G P+ + I + GR EA E+ E G
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 643
Query: 181 LTP 183
L P
Sbjct: 644 LVP 646
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV L G L AK+++ +M ++G +P+ ++ +IE +C+ G+++ VE+ S+ + G
Sbjct: 234 LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKG 293
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY I+ + +A ++EA + + G P + + +I G R G D+
Sbjct: 294 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 353
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ G P N Y LI + G+ +AA L M +G P SR F L+ +G
Sbjct: 354 RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGY 413
Query: 196 KNCGKHDLAEKIEQLE 211
C +H++ +E L+
Sbjct: 414 --CREHNMGRALELLD 427
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P +L+ G AG L A + ++ G PD++T ++ I + K+G
Sbjct: 569 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGR 628
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + + G DV TY LI K G +++AF L + G P +Y
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G A F + KG P+ Y+T+I + EA + EM G
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 181 LTPISRCFDLVTDG 194
+ P S ++ + G
Sbjct: 749 VQPHSFVYNALVHG 762
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 2/202 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + G G + A + ++M+ G P+ + LI K+G +
Sbjct: 537 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ + LG DV T I + K G + EA ++ L E G P Y+ +I
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G+ + AF E+ +KG PN +Y L+ + G A M E GL P
Sbjct: 657 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 716
Query: 184 ISRCFDLVTDGLKNCGKHDLAE 205
S + + DG C ++AE
Sbjct: 717 DSVTYSTMIDGY--CKSENVAE 736
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 1/198 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P ++ GL + L A +++ KM G P++ ++ LI G
Sbjct: 429 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D+ Y +I +SKAG ++EA L + G P +
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G+ +A +F E+ G PN P+YT LI + G +EA + + +G
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608
Query: 181 LTP-ISRCFDLVTDGLKN 197
+ P + C + LKN
Sbjct: 609 VLPDVQTCSAFIHGLLKN 626
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF + + L+ G + ++ A Q+ +MI + PD T+ ++I+ CK+G+
Sbjct: 779 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 837
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + D TY L+ +K G E F L +V G P Y
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 897
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + +AF E+ KG ++ LIT + EA+ L EM E+G
Sbjct: 898 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 957
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + GK D A ++
Sbjct: 958 LKPSLAACNTLVRSFHEAGKMDEATRV 984
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R LL++G + A +++++M K+ P ++ ++I +C +
Sbjct: 394 MVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +V Y ILI A + G I+EA RLL + G P Y
Sbjct: 454 LSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ ++A + EI+ +G P+ + I + G+ EAA Y EM + G
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573
Query: 181 LTPISRCFDLVTDG 194
L P + + ++ +G
Sbjct: 574 LMPNNPLYTVLING 587
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
NSL++ + K G +E ++Y + DV TY L+ A+ K G + A R+L + E
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256
Query: 109 DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
G NP +Y+ +I+G + G D+A + KG PN YT + R R E
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNE 316
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
A EM + GL P + DG G D +I+ + VS
Sbjct: 317 AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS 361
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ GL G +E A +++ M+ G P+ TF LIE C+ + +E+ + K
Sbjct: 372 NVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 431
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+Y +I + + A +LL + G P +Y+ +I G+ ++
Sbjct: 432 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEE 491
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + G P+ Y +I+ + G+ EA+ YL+E+ GL P + F
Sbjct: 492 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 551
Query: 194 GLKNCGKHDLAEK 206
G GK A K
Sbjct: 552 GYSKTGKMTEAAK 564
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G + G ++ ++ + M+ G +L T+N LI +CK G+
Sbjct: 324 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 383
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + LG + T+ +LI + + A LL + + P Y
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G A ++ G PN VY+ LI GR EA L M+ G
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P C++ + L GK + A
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEA 527
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG NP L+++G+ G ++ A ++ M ++G P+ T+ + +C++
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKR 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K G D + LI + G IDE R+ +V G Y
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A + G PN + LI R A L EM +
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + +GL +C LA K+
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKL 460
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ KM+ +G PD T+ +I CK + ++ V G + + +LI A+
Sbjct: 879 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 938
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K + EA +LL + E G P + +++ G+ D+A F +K G P+
Sbjct: 939 KREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT- 997
Query: 152 VYTTLITM 159
TTLI +
Sbjct: 998 --TTLIDL 1003
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ P V ++L+ GL A + A +M+++M+ +G PD TFNS+++ +CK+G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + TY LI + K +D A L+ V G P Y+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G +RG+ D+AF E+ G PN Y TLI + + +A L + G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ DGL G+ D A K+
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKM 207
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V +L GL G ++ A ++V +M G P+L T+N+LI+ +CK+ + E
Sbjct: 110 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA 169
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ ++ G DV TY I++ + K G +D+A +++ +++ G P Y +++G
Sbjct: 170 YELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 229
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCG--------------RGGRFVEA 169
R G+ D+A F E+ K + Y +L+ C RG +++
Sbjct: 230 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDV 289
Query: 170 ANYLM-----------------EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N LM +M G P + +++V DGL GK D A
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 341
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + ++ GL AG E A ++ M ++ P T+N+LI +CK
Sbjct: 36 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + G DV TY IL + K G IDEAF L+ + +G P Y
Sbjct: 96 VDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNT 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + + A+ + G P+ YT ++ + GR +A + M + G
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
TP + + +GL G+ D A I + VS
Sbjct: 216 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ P + L+ GL ++ AK +V++ + G PD+ T++ L + +CK G
Sbjct: 71 MAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGR 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G ++ TY LI + KA ++A+ LL LV G P Y
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTI 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G+ D A + +G P+ YT L+ R GR EA + EM
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 250
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
T + + + +G + A+K+
Sbjct: 251 CTADALAYVSLVNGYCKSSRTKEAQKV 277
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++++ GL A + A+Q++++MI+ G PD T+N+L+ CK
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP-SLYA 119
+ V + ++ K G D TY LI +S+ + +A+ L+H ++ +G + Y
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
II + G A + G N Y I + GR EA++ L EM
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV G + + A+++V+ + +G+ P ++ +N+L++ CK G ++ ++ + G
Sbjct: 261 LVNGYCKSSRTKEAQKVVDGI--RGT-PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 317
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY I++ + K G +DEAF L ++ G P Y II G F+ + +A
Sbjct: 318 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 377
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PP+ Y TL+ + RF +A L M + G+ P + ++ + GL
Sbjct: 378 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437
Query: 196 KNCGKHDLAEKIEQLEVSLRS 216
+ L + E + LR+
Sbjct: 438 SQTNR--LGDAYELMHEMLRN 456
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
PD+ T+N LI+ +CK+ + + EM + + G D T+ ++ + KAG + A L
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L + E P Y +I G ++ D A E G P+ Y+ L +
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
GR EA + EM+ G TP ++ + DGL K + A ++ + VS
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVS 178
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P + + L+ G G L+ + M +G P+++T+N +++ +CK G+V+
Sbjct: 284 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 343
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
S+ G DV +Y I+I + KA EA ++L +++ G P Y ++
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ +FDDA + G P+ Y TLI+ + R +A + EM G +S
Sbjct: 404 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV-VSA 462
Query: 187 C--FDLVTDGL 195
C ++ + D L
Sbjct: 463 CTTYNTIIDRL 473
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G ++ + L G L+ A ++++M + D ++ ++I +CK+ +
Sbjct: 489 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQ 545
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ ++ + + G C T+ +LI A +K +DEA LL +V+ G +P Y
Sbjct: 546 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYN 605
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEM 176
+I + + D A+ F E+ ++G + YT LI +CG+ GR EA L EM
Sbjct: 606 MVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ-GRGKEALQVLEEM 662
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P ++ ++++ GL G ++ A + M G PD+ ++N +I+ + K+ +
Sbjct: 313 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G D TY L+ K D+A +L N+++ G +P Y
Sbjct: 373 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNR-PVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + DA+ E+ G + Y T+I + G +A + MT
Sbjct: 433 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 492
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ + +++ D L G+ D A +
Sbjct: 493 GVEANTVTYNIFIDRLCKEGRLDEASSL 520
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG+ P V +L++GLLN E +++++ M+ +G +P++ T++ LI ++C+ G+
Sbjct: 86 ISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGK 145
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE V + + + G D +Y LI A K +D A L +++ DG P Y
Sbjct: 146 VEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNT 205
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + G+ D+A F ++ G PPN Y TL + G + A ++EM
Sbjct: 206 ILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKD 265
Query: 181 LTP 183
+ P
Sbjct: 266 IDP 268
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ L G +E A ++ M +QG PD +++ LI CK
Sbjct: 121 MLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESR 180
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E S+ G D+ Y ++ + K G DEA ++ L E G P S Y
Sbjct: 181 VDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNT 240
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G A E+ K P+ Y +LI+ R +A L++M
Sbjct: 241 LFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSV 300
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P +++V GL H +++ IE
Sbjct: 301 YQPSVISYNIVLLGLSKV--HRISDAIE 326
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ + G ++ +++++MI+ G PD+ FN+++ +C+ G V+ E +
Sbjct: 30 ILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAK 89
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G DV +Y IL+ + ++ +L+ +++ G P Y+ +I R G+ ++A
Sbjct: 90 GYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEA 149
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+K +G P+ Y LI + R A +L M G P ++ +
Sbjct: 150 VSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILST 209
Query: 195 LKNCGKHDLAEKI 207
L GK D A KI
Sbjct: 210 LCKNGKADEALKI 222
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 37 IKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMI 96
++Q + L T+ LIE G V+ +++ + + G D+ + ++ + + G++
Sbjct: 17 LQQTNPISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLV 76
Query: 97 DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
D AF + + G+ P Y+ +++G + +++D S++ KG PN Y+ L
Sbjct: 77 DRAFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSIL 136
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
I+ R G+ EA + L M E GLTP + +D + + DLA IE LE
Sbjct: 137 ISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLA--IEFLE 189
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + +V G+ G ++ A + + + +G PD+ +++ L+ + +
Sbjct: 51 MIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSILLRGLLNQRK 110
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + G +V TY ILI ++ + G ++EA LL + E G P Y P
Sbjct: 111 WEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDP 170
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + D A F + G P+ Y T+++ + G+ EA ++ E+G
Sbjct: 171 LIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVG 230
Query: 181 LTPISRCFDLVTDGLKNCG 199
P ++ + L + G
Sbjct: 231 CPPNVSSYNTLFSALWSSG 249
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF V ++L GL E AK+++N M+++G P++ T + IE C+ G
Sbjct: 383 MERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGN 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ K G ++ TY LI A SK + +A L +VE G P Y
Sbjct: 443 LAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTS 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F+E+ +KG N YT +I+ + GR EA EM MG
Sbjct: 503 LIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMG 562
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
L P R F+ + L H ++ E E+ + +
Sbjct: 563 LIPDDRVFEALVGSLHKPSSHAALKQNEYGELKINT 598
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P L+ G+ AG +E+A+ ++ +M +G D ++ FN++++ CK G ++
Sbjct: 316 RGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDE 375
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G ADV TY IL + K +EA R+L+ +VE G P A I+
Sbjct: 376 AFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIE 435
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G + F I+ +G PN Y TLI + + +A EM E GL P
Sbjct: 436 IYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLP 495
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG + A + ++MI +G P+ TF +LI +CK+G++E + + G +V
Sbjct: 300 AGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVI 359
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ ++ K GM+DEAFRL + G Y + G + ++++A + +
Sbjct: 360 FNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMV 419
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
KG PN T I + + G E +L + + G+ P ++ + D
Sbjct: 420 EKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDA 471
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V+ ++V L G + AK+++N+M +G P + T+N+L+ + E E+
Sbjct: 182 VQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILG 241
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ + G A + TY ILI + + I EA ++ + E +Y +I R G
Sbjct: 242 LMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAG 301
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
A F E+ +G PN + LI+ + G+ A L EM G+ F+
Sbjct: 302 NVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFN 361
Query: 190 LVTDGLKNCGKHDLAEKIEQL 210
+ DG G D A +++ +
Sbjct: 362 TMMDGYCKRGMMDEAFRLQDI 382
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + +L++ ++ + A+++ +M ++ + D+ + S+I C++G
Sbjct: 243 MEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGN 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G + T+ LI V KAG ++ A LL + G + ++
Sbjct: 303 VRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNT 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +RG D+AF ++ KG + Y L + + R+ EA L M E G
Sbjct: 363 MMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKG 422
Query: 181 LTP 183
+ P
Sbjct: 423 VAP 425
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V + L+ + E +++ M ++G L T+ LIE S
Sbjct: 208 MAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSER 267
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y +C+ DV Y +I +AG + A L ++ G P +
Sbjct: 268 IGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGA 327
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + GQ + A E++ KG N ++ T++ + G EA M G
Sbjct: 328 LISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKG 387
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++++ GL +++ A+++
Sbjct: 388 FEADVFTYNILASGLCKLHRYEEAKRV 414
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 35 KMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV--- 90
+M++ G D +++ +++ +C+ GEV E+ + G V TY L+ A
Sbjct: 171 RMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVR 230
Query: 91 -SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+ G +DE L+ +G Y +I+ + +A + E+ + +
Sbjct: 231 KDREG-VDEILGLMER---EGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMD 286
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
VYT++I+ R G A+ EM G+ P + F + G+ G+ + AE
Sbjct: 287 VYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAE 342
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G ++L+QGL AG + A+++ +M+ G P++ T+N+L++ +CK+G+
Sbjct: 217 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 276
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + + + TY I+I + KAG +++ + L NL G P Y
Sbjct: 277 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 336
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G ++A F E+K G PN Y TLI R G +A + EM G
Sbjct: 337 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 396
Query: 181 LTPISRCFDLVTDGLKN 197
+ LVT+ L +
Sbjct: 397 FAGDASTIGLVTNMLHD 413
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 36/246 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + L+ G L+ AKQM M+ + PD+ T+N+LI+ CK
Sbjct: 147 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 206
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF------ 114
VE +E++ + + G + TY ILI + +AG D A + +V DG P
Sbjct: 207 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 266
Query: 115 ---------------------------PSLYA--PIIKGAFRRGQFDDAFCFFSEIKIKG 145
P++Y +I+G + G+ +D + F + +KG
Sbjct: 267 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 326
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD-LVTDGLKNCGKHDLA 204
P+ Y T+I+ R G EA EM E G P S C++ L+ L++ + A
Sbjct: 327 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 386
Query: 205 EKIEQL 210
E I+++
Sbjct: 387 ELIKEM 392
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V L+ + G L A+++ ++M+K+ DP + T++SLI C
Sbjct: 112 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 171
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+ + DV TY LI K ++E + + + G Y
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F+ G D A F E+ G PPN Y TL+ + G+ +A +
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++ +G+ GK
Sbjct: 292 MEPTIYTYNIMIEGMCKAGK 311
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V + ++ GL +++ A + +M +G P++ T++SLI +C G
Sbjct: 42 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 101
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV T+ LI A K G + EA +L +V+ +P Y+
Sbjct: 102 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 161
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F + K P+ Y TLI + R E EM++ G
Sbjct: 162 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 221
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L + ++++ GL G D+A++I + VS
Sbjct: 222 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 254
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ L N G A ++++ MI++ +PD+ TF++LI+ K G+
Sbjct: 77 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + K + TY LI +DEA ++ +V P Y
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 196
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + ++ F E+ +G N Y LI + G A EM G
Sbjct: 197 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++ + DGL GK + A
Sbjct: 257 VPPNIMTYNTLLDGLCKNGKLEKA 280
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+ TY +++ + K G D AF LL+ + + P +Y II G + DDA
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E++ KG PN Y++LI+ GR+ +A+ L +M E + P F + D
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 195 LKNCGKHDLAEKIEQLEVSLRSV 217
GK AEK+ E+ RS+
Sbjct: 131 FVKEGKLVEAEKLYD-EMVKRSI 152
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G ++L+QGL AG + A+++ +M+ G P++ T+N+L++ +CK+G+
Sbjct: 1036 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 1095
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + + + TY I+I + KAG +++ + L NL G P Y
Sbjct: 1096 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 1155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G ++A F E+K G PN Y TLI R G +A + EM G
Sbjct: 1156 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215
Query: 181 LTPISRCFDLVTDGLKN 197
+ LVT+ L +
Sbjct: 1216 FAGDASTIGLVTNMLHD 1232
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L+ G ++ + A +V++M G P+ TFN+LI + +
Sbjct: 760 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 819
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G D+ TY +++ + K G D AF LL+ + + P +Y II G
Sbjct: 820 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ DDA F E++ KG PN Y++LI+ GR+ +A+ L +M E + P
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
F + D GK AEK+
Sbjct: 940 VFTFSALIDAFVKEGKLVEAEKL 962
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 36/246 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + L+ G L+ AKQM M+ + PD+ T+N+LI+ CK
Sbjct: 966 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF------ 114
VE +E++ + + G + TY ILI + +AG D A + +V DG P
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 1085
Query: 115 ---------------------------PSLYA--PIIKGAFRRGQFDDAFCFFSEIKIKG 145
P++Y +I+G + G+ +D + F + +KG
Sbjct: 1086 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 1145
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD-LVTDGLKNCGKHDLA 204
P+ Y T+I+ R G EA EM E G P S C++ L+ L++ + A
Sbjct: 1146 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 1205
Query: 205 EKIEQL 210
E I+++
Sbjct: 1206 ELIKEM 1211
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V L+ + G L A+++ ++M+K+ DP + T++SLI C
Sbjct: 931 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 990
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+ + DV TY LI K ++E + + + G Y
Sbjct: 991 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F+ G D A F E+ G PPN Y TL+ + G+ +A +
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++ +G+ GK
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGK 1130
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 4/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+ + G + AK++ +M++ DPD+ T++SLI +C
Sbjct: 354 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 413
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+ + G ADV +Y LI KA +++ +L + + G Y
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL--MEMTE 178
+I+G F+ G D A FFS++ G P+ Y L+ G +A M+ E
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
M L ++ + V G+ GK
Sbjct: 534 MDLDIVT--YTTVIRGMCKTGK 553
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
KM G DL TFN +I C +V + + + KLG D T L+ +
Sbjct: 213 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 272
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+ +A L+ +VE G+ P Y II + + +DAF FF EI+ KG PN YT
Sbjct: 273 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 332
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
L+ R+ +AA L +M + +TP + + D GK
Sbjct: 333 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 378
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ KM+K G +PD T SL+ C+ V V + + ++G D+ Y +I
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
++ K +++AF + G P Y ++ G ++ DA S++ K P
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
N Y+ L+ + G+ +EA EM M + P + + +GL + D A ++
Sbjct: 362 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 421
Query: 209 QLEVS 213
L VS
Sbjct: 422 DLMVS 426
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V + ++ GL +++ A + +M +G P++ T++SLI +C G
Sbjct: 861 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 920
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV T+ LI A K G + EA +L +V+ +P Y+
Sbjct: 921 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F + K P+ Y TLI + R E EM++ G
Sbjct: 981 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L + ++++ GL G D+A++I + VS
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 1073
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ L N G A ++++ MI++ +PD+ TF++LI+ K G+
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + K + TY LI +DEA ++ +V P Y
Sbjct: 956 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + ++ F E+ +G N Y LI + G A EM G
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++ + DGL GK + A
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKA 1099
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+P + L+ GL ++ A QM + M+ +G D+ ++N+LI CK+ VE +
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+++ + + G ++ TY LI +AG +D+A + G +P Y ++ G
Sbjct: 454 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G+ + A F +++ + + YTT+I + G+ EA + ++ GL P
Sbjct: 514 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 573
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ + GL C K L E +E L ++
Sbjct: 574 VTYTTMMSGL--CTKGLLHE-VEALYTKMK 600
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + L+ G A +E ++ +M ++G + T+N+LI+ ++G+
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E + + G D+ TY IL+ + G +++A + ++ + + Y
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ ++A+ F + +KG P+ YTT+++ G E +M + G
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Query: 181 L 181
L
Sbjct: 604 L 604
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P LV G + A +V+KM++ G PD+ +N++I+++CK+ V
Sbjct: 253 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 312
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G +V TY L+ + + +A RLL ++++ P Y+ ++
Sbjct: 313 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 372
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G+ +A F E+ P+ Y++LI R EA M G
Sbjct: 373 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 428
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P + + ++ L + A ++ ++G P++ T+ +L+ +C S
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K +V TY L+ A K G + EA L +V +P Y+
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F + KG + Y TLI + R + EM++ G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
L + ++ + G G D A++
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQE 489
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 4/201 (1%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L + L+ L+ A + +M+K P + F+ L+ I K + + + + +
Sbjct: 663 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 722
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
LG + TY ILI + + A +L +++ G+ P + ++ G +
Sbjct: 723 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 782
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A ++ + G+ PN + TLI + EA + M G P + +V
Sbjct: 783 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 842
Query: 193 DGLKNCGKHDLA----EKIEQ 209
+GL G DLA K+EQ
Sbjct: 843 NGLCKRGDTDLAFNLLNKMEQ 863
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T++ LI C+ ++ + + + KLG ++ T L+ + I EA L+ +
Sbjct: 732 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 791
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGR 165
G+ P + +I G F + +A + KG P+ Y ++ +C RG
Sbjct: 792 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 851
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ A N L +M + L P ++ + DGL
Sbjct: 852 DL-AFNLLNKMEQGKLEPGVLIYNTIIDGL 880
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ L G ++ A+++VN+M+ QGS D T+NSLI+ +C++GEV+ ++ + +
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + ILI + ++GM++EA +V G P + +I G R G+ +D
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F +++ +G PP+ + TL++ +GG +A L E E G P R + ++
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 194 GL 195
+
Sbjct: 713 SI 714
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P G + L+ + A ++ +M ++G PD+ TFNSLI +C+ E
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G A+ TY LI A + G I EA +L++ +V G Y
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG R G+ D A F ++ GH P+ LI R G EA + EM G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP F+ + +GL G+
Sbjct: 630 STPDIVTFNSLINGLCRAGR 649
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V +LV G G ++ A ++N+M G P+ FN LI CK
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE++ + + G DV T+ LI + + I A LL +++ +G Y
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG+ +A +E+ +G P + Y +LI R G +A + +M G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE-QLEVSLR 215
P + +++ +GL C + E +E Q E+ LR
Sbjct: 595 HAPSNISCNILINGL--CRSGMVEEAVEFQKEMVLR 628
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ GL ++ A ++ MI +G + T+N+LI + GE
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + GS D TY LI + +AG +D+A L ++ DGH P
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G ++A F E+ ++G P+ + +LI R GR + ++ G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 181 LTPISRCFDLVTDGL 195
+ P + F+ + L
Sbjct: 665 IPPDTVTFNTLMSWL 679
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVE 66
P + + L+ G + G L+ AK +++ M+ G PD+ T+NSLI K G V +E
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + G +V +Y IL+ K G IDEA+ +L+ + DG P + +I
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ + +A F E+ KG P+ + +LI+ A L +M G+ +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 187 CFDLVTDGLKNCGKHDLAEKI 207
++ + + G+ A K+
Sbjct: 531 TYNTLINAFLRRGEIKEARKL 551
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 93/240 (38%), Gaps = 34/240 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P L+ L + A Q++ +M G PD ETFN +I +CK
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA----FR-----------LLHN 105
+ +M + G D TY L+ + K G +D A +R L+H
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 106 LVEDGH-----------------NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
V G P Y +I G ++ G A +++ KG P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
N YT L+ + G+ EA N L EM+ GL P + F+ + C +H + E +E
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF--CKEHRIPEAVE 480
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 70/166 (42%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
+P +++N ++E + + ++Y + + T+ +++ A ID A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
LL ++ + G P +Y +I + + ++A E+ + G P+ + +I
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ R EAA + M G P + + +GL G+ D A+ +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GL AG +E M K+ +G PD TFN+L+ +CK G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 61 VEFCVEMYYSVCKL-------GSCADVSTYKILIPAVSKAGMIDE 98
V Y C L G + T+ IL+ ++ +D
Sbjct: 685 V-------YDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + LV GL +G + A ++ MI+ G PD+ TFNS+++ +CK + +
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G +V TY LI +SK +DEA +LL +VE G Y+ ++ G +
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +DA +++ G P+ Y TLI + R EA L EM E G P
Sbjct: 591 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + GL G+ D A +I
Sbjct: 651 YTTLCHGLCRSGRFDEAVEI 670
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + LV LL G + A ++ +M G P+L TF +I+ +CK GE
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G DV + +L+ A+ + G +DEA+ ++ G P Y
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++ G+ + A + P +T + + G A + M + G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++P + +D + DGL GK D+A
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIA 265
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ GL AG + A K I+ G P + T++++I+ +C+ EV+ ++ +
Sbjct: 5 NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + TY L+ A+ G EAF LL + +G P + IIKG + G+ +
Sbjct: 65 RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF E+ +G P+ ++T L+ GR EA + ++ +G TP + ++ + D
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184
Query: 194 GLKNCGKHDLAEKIEQL 210
GL G+ + A + QL
Sbjct: 185 GLYKAGRLEAAGMVLQL 201
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++G P V L+ GL ++ A Q++ KM++ G + T++++++ + K G +E
Sbjct: 536 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 595
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V + + G D TY LI K + EA LL ++E G +P Y +
Sbjct: 596 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 655
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EMGL 181
G R G+FD+A + +G PN Y++++ + GR EA Y +M + +
Sbjct: 656 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 715
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + + DGL G+ D E E LE +R+
Sbjct: 716 APHVIAYSALIDGLCKAGRID--EAYEFLERMIRA 748
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V + ++ GL + A + + +++G P++ T+++LI+ + K +
Sbjct: 499 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 558
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + +LG A+ TY ++ + K G +++A +L + + G P Y
Sbjct: 559 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 618
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+R + +A E+ G P+ YTTL R GRF EA L M G
Sbjct: 619 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + DGL G+
Sbjct: 679 CAPNAITYSSIVDGLCKAGR 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSGE-- 60
+G +P V L+QGL NAG + A ++ +M+ +G P+ T+ L+E +CK+G+
Sbjct: 375 EGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSR 434
Query: 61 -VEFCVE----------------------MYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
+E C E + VC+ + TY L+ +SK+GM+
Sbjct: 435 RLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCR----PTLVTYNTLVTGLSKSGMVR 490
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+A LL ++E G +P + ++ G + + DA F +G PN Y+TLI
Sbjct: 491 DALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 550
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ + EA L +M E+G + + V DGL G+ + A
Sbjct: 551 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 597
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V ++ GL ++ +++ +M +G P+ T+N+L+ + G +
Sbjct: 31 GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEA 90
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G ++ T+ ++I + K G I+ AFR++ +V+ G P ++ ++
Sbjct: 91 FSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHA 150
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ D+A+ FF ++ + G P+ Y T++ + GR A L + E +P
Sbjct: 151 LCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPT 210
Query: 185 SRCFDLVTDGLKNCG 199
F + DGL G
Sbjct: 211 VFTFTIAVDGLSKAG 225
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ P V L+ GL AG ++ A + + +MI+ G PD+ TF+ LI +C +G ++
Sbjct: 712 DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 771
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+E++ + + G AD+ Y +I A G A+ LL + G + +I
Sbjct: 772 TGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVI 831
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
K + D+A +F I + Y TLIT R +A L M G +
Sbjct: 832 KALCGNDRIDEAVSYFHSIPEDCR--DEISYNTLITSLVASRRSEQALELLRAMVADGGS 889
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + V DGL G ++A K+ Q
Sbjct: 890 PDACNYMTVMDGLFKAGSPEVAAKLLQ 916
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 7/212 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + L+++GL G +E+A ++V++M+ +G PD+E L+ +C+ G
Sbjct: 97 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGR 156
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + V +G D TY ++ + KAG ++ A +L L E +P +
Sbjct: 157 VDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTI 216
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM-TEM 179
+ G + G A+ FF + G PN Y LI + G+ A L + ++
Sbjct: 217 AVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA 276
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G+ F + GL C H L E I+ L+
Sbjct: 277 GMFA----FSSLLHGL--CQAHRLEEAIQLLK 302
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G + + ++ G +A ++ +M G + T +I+ +C +
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V ++S+ + C D +Y LI ++ + ++A LL +V DG +P Y
Sbjct: 840 IDEAVSYFHSIPE--DCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMT 897
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G F+ G + A E++ +GH P+ YT +I+ + + A +Y EM
Sbjct: 898 VMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN 957
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + D K D A K+
Sbjct: 958 LKPDAIVYSSLIDAFCKADKVDDAWKL 984
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L+ G L A ++ +M++ G P + T+ +L +C+SG
Sbjct: 604 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 663
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG-HNPFPSLYA 119
+ VE+ + G + TY ++ + KAG + EA + D P Y+
Sbjct: 664 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 723
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ D+A+ F + G P+ ++ LI GR M E
Sbjct: 724 ALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783
Query: 180 G 180
G
Sbjct: 784 G 784
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL A LE A Q++ M P++ FNSL+ +C++ V+ E++ + + G
Sbjct: 284 LLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESG 340
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DGHNPFPSLYAPIIKGAFRRGQFDDA 134
ADV TY IL+ + K I EA+R + + +G +P ++ +I+G G+ + A
Sbjct: 341 CSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQA 400
Query: 135 FCFFSE-IKIKGHPPNRPVYTTLIT-MCGRG 163
+ + + ++G PNR Y L+ +C G
Sbjct: 401 WEVYERMVAVEGISPNRFTYAFLLEGLCKAG 431
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY +LI + KAG + +AF ++ G P Y+ +I G R + D E+
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G PN Y TL+ GR EA + L M G P F L+ GL G+
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 202 DLAEKI 207
+ A ++
Sbjct: 123 EAAFRV 128
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL +E A Q++++MI +G PD T+NSL+ C+ G++E ++ ++
Sbjct: 477 NTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS 536
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY LI + +AG +D A +LL ++ G P Y P+I+ F R + +
Sbjct: 537 NGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKE 596
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
F E+ K PP+ + + +C GG EA ++ +EM E G+ P F +
Sbjct: 597 GMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLA 656
Query: 193 DGLKNCGKHD 202
+GL + D
Sbjct: 657 EGLCSLSMED 666
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S++GF+P + LV G G + A +V+ MI++G DPD+ T+NSLI +CK GE
Sbjct: 254 VSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGE 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + + TY LI A+ K I+ A L LV G P +
Sbjct: 314 FEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNT 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G D A F E+K KG P+ Y+ LI R EA L EM G
Sbjct: 374 LIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSG 433
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEV 212
+ ++ + DGL + + AE+I +Q+E+
Sbjct: 434 CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 466
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF+P V + L+ G+ G E A +++ +MI + P+ T+N+LI +CK E
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G DV T+ LI + + D A + + G P Y+
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + +A E++ G N VY TLI + R +A +M +G
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++ S ++ + DGL KN + ++ ++Q+
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQM 499
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + L+ L +E+A + ++ +G PD+ TFN+LI+ +C S + +E
Sbjct: 330 SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAME 389
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
M+ + G D TY ILI ++ + EA LL + G +Y +I G
Sbjct: 390 MFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLC 449
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + +DA F ++++ G + Y TLI + R EA+ + +M GL P
Sbjct: 450 KSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP 506
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G V ++L++ L A L A M+ +M G PD TF +L++ + G+
Sbjct: 149 MVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGD 208
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++M + G + K+L+ K G ++EA R + + E+G +P +
Sbjct: 209 LNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNS 268
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G +DA + KG P+ Y +LI+ + G F +A L +M
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+P + ++ + L + + A + ++ VS
Sbjct: 329 CSPNTVTYNTLISALCKENEIEAATDLARILVS 361
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + L+QGL + + A +M +M +G PD T++ LI+++C ++
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKE 421
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G + Y LI + K+ I++A + + G + Y +I
Sbjct: 422 ALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID 481
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++A ++ ++G P++ Y +L+T R G +A + + M G P
Sbjct: 482 GLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP 541
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+ + GL G+ D+A K+ LRSV
Sbjct: 542 DIFTYGTLIGGLCRAGRVDVASKL------LRSV 569
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 4/186 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P +L+ L L+ A ++ +M G + +N+LI+ +CKS
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + LG TY LI + K ++EA +L+ ++ +G P Y
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G + A + G P+ Y TLI R GR V+ A+ L+ +M
Sbjct: 514 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGR-VDVASKLLRSVQMK 572
Query: 181 ---LTP 183
LTP
Sbjct: 573 GIVLTP 578
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 94/205 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P ++ + L+ L+ + + +KM+ +G D+ TFN LI+ +CK+ ++
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ M + G D T+ L+ + G ++ A ++ ++ G ++ G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ ++A F E+ +G P++ + +L+ R G +A + + M E G P
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
++ + G+ G+ + A +I Q
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQ 322
>gi|341605797|gb|AEK83001.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605799|gb|AEK83002.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605801|gb|AEK83003.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++KG P ++ + L+ L+ A ++ + Q+ + M G PD+ F++++ C G
Sbjct: 153 LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGR 212
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ + K+G +V TY +I + K G +DEAF+ + ++ P Y
Sbjct: 213 VDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGV 272
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +FD+A C E+ +G+ PN VY TLI R G A +M G
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++P S + + G + + AE +
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHL 359
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF + L+ GL AG E A +++ +M+++G D ++N+LI CK G+VE
Sbjct: 435 EKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVE 494
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + + G D+ TY +L+ + G I+EA L H ++G+ P Y +I
Sbjct: 495 EGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMI 554
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + ++ F E+ N VY TLI G EA +M G+
Sbjct: 555 DGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIP 614
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
S + + GL N G D A ++
Sbjct: 615 QTSATYSSLIHGLSNIGLVDSANQL 639
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++L+ GL N G +E A + ++ K G+ PD T+ +I+ CK+
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562
Query: 61 VEFCVEMYYSV-------------------CKLGSCADV----------------STYKI 85
VE +++ + C+ G+ + +TY
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSS 622
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI +S G++D A +LL + ++G +P Y +I G + GQ E+ I
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINN 682
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN+ YT +I + G AA L EM + G+ P + ++ +T+G GK + A
Sbjct: 683 VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEAL 742
Query: 206 KI 207
K+
Sbjct: 743 KV 744
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G + L+ G +E ++ +M+++G PD+ T+N L+ +C G+
Sbjct: 468 MLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGK 527
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ K G+ D TY I+I KA ++E +L +V +Y
Sbjct: 528 IEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGT 587
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEM 179
+I+ G +AF +++ +G P Y++LI G V++AN L+ EM +
Sbjct: 588 LIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG-LVDSANQLLDEMRKE 646
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
GL+P C+ + G G+ + I Q E+S+ +V
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHKVDSILQ-EMSINNV 683
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
++ + + +G P L+T N L+ ++ K+ EV+ +++ +C G DV + ++ A
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
G +D+A L + + G P Y II G + G+ D+AF F +++ + P+
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
Y LI + RF EA L EM++ G P + ++ + DG G A +I
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327
Query: 211 EVS 213
+S
Sbjct: 328 MIS 330
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ F P LLV GL G A ++ +++++G + T N+LI +C++G E
Sbjct: 401 RNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G D +Y LI A K G ++E F+L +V G P Y ++
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
G G+ ++A + E K G+ P+ Y +I + R E EM M +
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKI 578
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MSD+G+ P + L+ G G + +A Q+ + MI G P+ T NSLI+ CKS +
Sbjct: 293 MSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQ 352
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G + T+ +I + D A + ++ P L
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTL 412
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A + + KG N LI G EAA L EM E G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472
Query: 181 L 181
L
Sbjct: 473 L 473
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+SA + +M+ + P+ L+ +C++G+ +E++Y + + G A+ T
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + +AG +EA +LL ++E G Y +I + G+ ++ F E+ +G
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y L+ G+ EA E + G P + + ++ DG + + E
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567
Query: 206 KIEQLEVSLR 215
K+ Q V+++
Sbjct: 568 KLFQEMVTMK 577
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + +L+ GL+ + A ++ +M +G P+ +N+LI+ C+ G
Sbjct: 258 MEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGN 317
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + T LI K+ ++ A LL ++ G +
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + +FD A F E+ ++ PN + T L++ + G+ EA + E G
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
+ + + GL G + A K+ E LE L
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGL 473
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +P +++ G G +++A +++N+M ++G PD T+N+L CK G+
Sbjct: 678 MSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGK 737
Query: 61 VEFCVEMYYSVCKLGSCADVS----TYKILIPAVSK 92
+E ++ VC L S +S TY LI K
Sbjct: 738 MEEALK----VCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 35/162 (21%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G L+ GL N G ++SA Q++++M K+G P++ + +LI CK G+
Sbjct: 608 MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667
Query: 61 V--------EFCV------EMYYSV-----CKLGS----------------CADVSTYKI 85
+ E + ++ Y++ CKLG+ D TY
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNA 727
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
L K G ++EA ++ + G + Y +I G +
Sbjct: 728 LTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V ++ ++GL +E A + + ++GS D T+ LI +CK+G + +++
Sbjct: 359 VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILK 418
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
G D Y ++ +SK G +DEA ++H + + G P + P+I G R
Sbjct: 419 EAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRAS 478
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A CFF E++ KG P Y TLI + RF +A +++ EM E P +
Sbjct: 479 KLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYS 538
Query: 190 LVTDGLKNCGKHDLA 204
L+ DGL K D+A
Sbjct: 539 LLMDGLCQGKKIDMA 553
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ GL G + + +M +M K + DL T++SLI +C G V+ VE+
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAF 126
Y + K DV TY L+ +AG I E+F L + E+ HN Y I+G F
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVS--YNIFIRGLF 370
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ ++A + ++ +G + Y LI + G +A L E + G +
Sbjct: 371 ENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAF 430
Query: 187 CFDLVTDGLKNCGKHDLA 204
+ + DGL G+ D A
Sbjct: 431 AYSSIVDGLSKQGRVDEA 448
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 90/202 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V + L+ GL A A V +M+++ PD+ T++ L++ +C+ +
Sbjct: 490 METKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKK 549
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ V G DV+ + IL+ + AG I++A L N+ + P +
Sbjct: 550 IDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNT 609
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++ + + A ++ + G P+ Y + GR + + + G
Sbjct: 610 LMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNG 669
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+ P S + ++ + G D
Sbjct: 670 ILPTSITWYILVRAVLKLGPLD 691
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +R + L+ + A LE A+ + G P+L+T+N LI+ K +
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + DV +Y +I + K+G + A + + E G P Y +I G
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228
Query: 125 AFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
F+RG + + + +KG PN Y +I + GRF E+ +EM E
Sbjct: 229 FFKRGDYVQGKEIWERL-VKGSCVYPNVVTYNVMINGLCKMGRFDES----LEMWE 279
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P ++ ++L++ + AK +++ M + PD+ ++ ++I + KSG++
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSA 203
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPII 122
+E++ + + G DV Y I+I K G + + LV+ G +P++ Y +I
Sbjct: 204 LEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVK-GSCVYPNVVTYNVMI 262
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+FD++ + +K + Y++LI G A EM + +
Sbjct: 263 NGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVV 322
Query: 183 PISRCFDLVTDGLKNCGK 200
++ + +G GK
Sbjct: 323 VDVVTYNALLNGFCRAGK 340
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
+ +Y L+ A +A ++++A L G P Y +IK + ++ QF +A
Sbjct: 114 IRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLD 173
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+ K P+ Y T+I + G V A EM E GL P C++++ DG G
Sbjct: 174 WMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRG 233
Query: 200 KHDLAEKIEQ 209
+ ++I +
Sbjct: 234 DYVQGKEIWE 243
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P + ++LV GL G ++ A+ ++ MIKQ DPD+ T+NSL++ +
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ ++ + G DV +Y ++I + K M+DEA LL + P Y+ +I
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA+ +E+ +G P + Y +L+ + + +A L ++ + G+ P
Sbjct: 303 GLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQP 362
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ ++ DGL G+ A+++ Q+
Sbjct: 363 DIYTYTILVDGLCKNGRLKDAQEVYQI 389
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V +++ GL ++ A ++ +M + P+ T++SLI+ + KSG
Sbjct: 250 MARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGR 309
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G ADV TY L+ A+ K +D+A LL + + G P Y
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI 369
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA + + IKG+ + F +A + L +M + G
Sbjct: 370 LVDGLCKNGRLKDAQEVYQILLIKGYHLD--------------SLFDKALSLLSKMEDNG 415
Query: 181 LTPISRCFDLVTDGL 195
TP F+++ L
Sbjct: 416 CTPNPVTFEILIRAL 430
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P L+ GL +G + A +VN+M +G D+ T+NSL++ +CK+ +
Sbjct: 285 MHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQ 344
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG---------------------MIDEA 99
V+ + + + G D+ TY IL+ + K G + D+A
Sbjct: 345 VDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKA 404
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LL + ++G P P + +I+ F D A E+ +G
Sbjct: 405 LSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARG 450
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ L + A + ++M+ + PD+ T+N+L+ G ++ V +
Sbjct: 117 PNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGL 176
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + D+ T+ IL+ + K G + +A +L +++ +P Y ++ G F
Sbjct: 177 FNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFL 236
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
Q + A F+ + +G P+ Y+ +I + EA N L EM + P +
Sbjct: 237 VKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVT 296
Query: 188 FDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 297 YSSLIDGLHKSGR 309
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 6/183 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV------EFCVEMYYSVC 72
L+ + + + ++M +G DL N L+ C G+V + + + V
Sbjct: 17 SLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVI 76
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G + +Y LI + KAG A ++L N+ P +Y+ II +
Sbjct: 77 AKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVI 136
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DAF +S++ +K P+ Y TL+ C GR EA +M + P F+++
Sbjct: 137 DAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILV 196
Query: 193 DGL 195
DGL
Sbjct: 197 DGL 199
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 76/161 (47%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
+ +I +G + ++ +LI+ +CK+GE +++ ++ L +V Y +I ++ K
Sbjct: 73 DDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKD 132
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
++ +AF L ++ +P Y ++ G G+ +A F+++ +K P+ +
Sbjct: 133 KLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTF 192
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
L+ + G +A N L M + + P ++ + DG
Sbjct: 193 NILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDG 233
>gi|341605773|gb|AEK82989.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEA 176
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEE 185
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A+ K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALXKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G AG E A + +M+ + PD+ TF +LI+ +CK+G+VE ++ +
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG +V TY +L+ + K+G I+E L +V G P Y ++ R + DD
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A S++K G P+ Y L+ + G+ +A L EM G P S F
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFG 546
Query: 194 GLKNCGKHDLAEKIEQLEVSL 214
GL G +LA +E L V L
Sbjct: 547 GLHRSG--NLAGTMELLRVVL 565
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G + A + MI G P++ T+N+L+ +CK+ ++E M S+ G
Sbjct: 231 LIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG 288
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +L+ A KA +DEA LLH + G P + II G + + +AF
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 348
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ + P++ + LI + G F +A+ EM + P F + DGL
Sbjct: 349 QIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGL 408
Query: 196 KNCGKHDLAEKIEQL 210
G+ + A I L
Sbjct: 409 CKAGQVEAARDILDL 423
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V + LV GL A +E A M+ M+ +G PD+ T++ L++ CK+ V+
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + + G +V T+ +I + K+ EAF++ + P + +I G
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAG 372
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
A + G F+ A F E+ K P+ + LI + G+ A + L M +G+ P
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++++ GL G+ + E E LE
Sbjct: 433 VVTYNVLVHGLCKSGR--IEEPCEFLE 457
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V +LV A ++ A ++++ M +G P++ TFNS+I+ +CKS
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V D T+ ILI KAG ++A L +V P +
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + GQ + A + G PPN Y L+ + GR E +L EM G
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S + + L + D A ++
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQL 490
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+ GL AG +E+A+ +++ M G P++ T+N L+ +CKSG
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + G + TY L+ A+ +A D+A +L+ L G +P Y
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++ G+ + A E+ KGH P+ + R G L + G
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKG 568
Query: 181 LTP 183
+ P
Sbjct: 569 MLP 571
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVN-KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
++++Q L AG A ++ +M + G P + T+N++I +CKS E+ +E++ +
Sbjct: 49 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 108
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
K G DV TY LI ++ KAG ++EA RL + G P Y+ +I G + G+ D
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168
Query: 133 DAFCFFSEIKIKGHP--PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL--TPISRCF 188
+A E+ K PN Y + + + EA + + + L +P + F
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 228
Query: 189 DLVTDGLKNCGKHDLA 204
+ DGL CG+ D A
Sbjct: 229 STLIDGLCKCGQTDEA 244
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + + ++ GL + L + ++ +++K+G PD+ T+N+LI+++CK+G+
Sbjct: 72 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+E ++ + G +V TY +LI + K G IDEA L+ + + P++ Y
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ G ++ +A ++ P+ ++TLI + G+ EA N +M
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACND--DM 249
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++ + +GL K + A +
Sbjct: 250 IAGGYVPNVVTYNALVNGLCKADKMERAHAM 280
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V + ++ GL + A Q+ ++ + PD TFN LI CK+G
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + DV T+ LI + KAG ++ A +L + G P Y
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ ++ F E+ G P Y +L+ R R +A + ++ G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++++ DGL GK + A
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQA 522
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++LV GL +G +E + + +M+ G P+ T+ SL+ +C++
Sbjct: 424 MGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASR 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D TY IL+ + K+G ++A +L +V GH P +A
Sbjct: 484 TDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 543
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
G R G + KG P+ ++++
Sbjct: 544 CFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYY-SVCKLGSCADVSTYKILIPAVSKAGMID 97
+ S + +N +++++C++GE +E++ + + G + TY +I + K+ +
Sbjct: 39 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 98
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
L LV+ GH+P Y +I + G ++A + +G PN Y+ LI
Sbjct: 99 AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158
Query: 158 TMCGRGGRFVEAANYLMEMTEMG--LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ GR EA + EMT + P ++ DGL C + AE E + SLR
Sbjct: 159 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL--CKQSMTAEACELMR-SLR 215
>gi|341605693|gb|AEK82949.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAF 126
LI A++K G +DEA L + E+G + Y +I G F
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMF 204
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 2/184 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL + +E A Q++++MI +G PD T+NSL+ C+ G+++ ++ ++
Sbjct: 509 NTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY LI + KAG ++ A +LL ++ G P Y P+I+G FR+ + +
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTE 628
Query: 134 AFCFFSEIKIKGH-PPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A F E+ + P+ Y + +C GG EA ++L+E+ E G P ++
Sbjct: 629 AINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Query: 192 TDGL 195
+GL
Sbjct: 689 AEGL 692
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 1 MSDK-GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
MS++ GF P + LV GL AG+++ A ++++ M+++G DPD+ T+NS+I +CK G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
EV+ VE + + TY LI + K ++EA L L G P +
Sbjct: 345 EVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+G A F E++ KG P+ Y LI G+ EA N L +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEV 212
G ++ + DG K AE+I +++EV
Sbjct: 465 GCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P V + L+QGL A ++ +M +G +PD T+N LI+++C G+
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + M + G V TY LI KA I EA + + G + Y
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA ++ ++G P++ Y +L+T RGG +AA+ + MT G
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + GL G+ ++A K+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G++P V + ++ GL G ++ A + +++MI + P+ T+N+LI T+CK +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + G DV T+ LI + A L + G P Y
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +G+ D+A ++++ G + Y TLI + + EA EM G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++ S ++ + DGL K+ D ++ ++Q+
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+++V G G +E A + +M Q G PD TFN+L+ +CK+G V+ +E+ +
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G DV TY +I + K G + EA L ++ +P Y +I + Q +
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLIT-MC-GRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
+A + KG P+ + +LI +C R R A EM G P +++
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNM 440
Query: 191 VTDGLKNCGKHDLA-EKIEQLEVS 213
+ D L + GK D A ++Q+E+S
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELS 464
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ L + G L+ A M+ +M G + T+N+LI+ CK+ +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G + TY LI + K+ +++A +L+ ++ +G P Y
Sbjct: 486 IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNS 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
++ R G A + G P+ Y TLI+ + GR VE A+ L+ +M
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR-VEVASKLLRSIQMK 604
Query: 180 GLTPISRCFDLVTDGL 195
G+ ++ V GL
Sbjct: 605 GIALTPHAYNPVIQGL 620
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D G P + ++ L++ L+ + KM G PD+ TFN LI+ +C++ +
Sbjct: 145 IDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M + G D T+ ++ + G +D A R+ +VE G +
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ G + G+ +DA F E+ + G P++ + TL+ + G A + M +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G P ++ V GL C ++ E +E L+
Sbjct: 325 GYDPDVYTYNSVISGL--CKLGEVKEAVEFLD 354
>gi|341605743|gb|AEK82974.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605753|gb|AEK82979.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605831|gb|AEK83018.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P VR ++L++G +G ++ AK ++ +M + PD T+++L++ C+ G
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D+ TY I++ + K G +DEAF LL + E P +Y
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+ + A FS + +KG P+ YT +I+ +GG EA +M G
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427
Query: 181 LTPISRCFDLVTDG-LKNCGKHDLAEKIEQL 210
P S ++++ G L+N + IE++
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P V ++ G N G A + +M+++ PD TFN L++ + K G
Sbjct: 143 MVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGM 202
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ + G +V+TY L+ +DEA +L + +V G P Y
Sbjct: 203 ILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNI 262
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G+ D+A +E+ K P+ Y+TL+ + GR +A L EM G
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG 322
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + +V DGL C + L E E L+
Sbjct: 323 LLPDLMTYSIVLDGL--CKQGHLDEAFELLK 351
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V ++ L + A + +++M+ +G P++ T++S++ C G
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + D T+ IL+ +SK GMI EA + ++E G P + Y
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + Q D+A F+ + KG P+ Y LI + GR EA L EM+
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + + G G+ A+K+
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKL 314
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P ++LV GL G + A+ + MI++G +P++ T+N+L++ C +
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G V +Y ILI K+G IDEA LL + P Y+
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG + G+ DA E++ G P+ Y+ ++ + G EA L M E
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ G+ N GK + A ++
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAAREL 384
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L+ GL + + A ++ ++M+K G +PD+ T++++I +CK G
Sbjct: 42 GLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMA 101
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G +V Y +I ++ K +I EA L +V G +P Y+ I+ G
Sbjct: 102 IQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHG 161
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ ++A F ++ + P+ + L+ + G +EA M E G+ P
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
++ + DG + + D A+K+ + V
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMV 249
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS K P L++G G + A++++ +M G PDL T++ +++ +CK G
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ ++ + ++ Y ILI + G ++ A L NL G P Y
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G ++A F ++ + G PN Y +I R G A + EM G
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462
Query: 181 LTPISRCFDLVTD 193
+ S F +++D
Sbjct: 463 FSADSSTFQMLSD 475
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
N + A ++ M K G P+ TF++L+ + ++ V+++ + K+G DV
Sbjct: 24 NHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVI 83
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY +I + K G A +LL + E G P +Y+ II + +A F SE+
Sbjct: 84 TYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEM 143
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+G PN Y++++ GR EA + +M E + P + F+++ DGL G
Sbjct: 144 VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEG 201
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 43 PDLETFNSLIETICKSGE--VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
PD+ T LI C S F + ++ KLG + T+ L+ +S I +A
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 101 RLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+L +V+ G+ P Y+ II G + G A +++ KG PN VY+T+I
Sbjct: 68 KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ EA +L EM G++P + + G N G+ + A +
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V +++ GLL G A ++ M G P+ T+N +I+ ++G+
Sbjct: 391 KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSN 450
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMI 96
+ + G AD ST+++L S+ +I
Sbjct: 451 AGRLIEEMVGRGFSADSSTFQMLSDLESRDEII 483
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+QGL AG + A+++ KM+ G PD+ T++ L++ +CK G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + K D+ TY I+I + KAG +++ + L +L G P +Y
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G ++A F E+K G PN Y TLI R G +A + EM G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 181 L----TPISRCFDLVTDG 194
+ IS +++ DG
Sbjct: 601 FVGDASTISMVINMLHDG 618
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 1/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L++G A +E ++ +M ++G + T+N+LI+ + ++G+ + ++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ TY IL+ + K G +++A + L + P Y +I+G +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +D + F + +KG PN +YTT+I+ R G EA EM E G P S
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 188 FD-LVTDGLKNCGKHDLAEKIEQLE 211
++ L+ L++ K AE I+++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMR 597
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V L+ + G L A+++ ++MIK+ DPD+ T++SLI C
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M+ + +V TY LI KA ++E L + + G Y
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F+ G D A F ++ G PP+ Y+ L+ + G+ +A + +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++ +G+ GK
Sbjct: 496 MEPDIYTYNIMIEGMCKAGK 515
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + L++ L N G A ++++ MI++ +P++ TF++LI+ K G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + K D+ TY LI +DEA + ++ P Y
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + ++ F E+ +G N Y TLI + G A +M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ DGL GK + A
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKA 484
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+ P + L+ GL A ++++M+ +G PDL T+ +++ +CK G+++ +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + K ADV Y +I A+ +++A L + G P Y +I+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G++ DA S++ + PN ++ LI + G+ VEA EM + + P
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ + +G + D A+ + +L +S
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMIS 388
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + L+ G + + A +V++M P+ TFN+LI + +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D+ TY ++ + K G ID A LL + + +Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II +DA F+E+ KG PN Y +LI GR+ +A+ L +M E
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + D GK AEK+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKL 347
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L N + A + +M +G P++ T+NSLI +C G + + +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T+ LI A K G + EA +L +++ +P Y+ +I G + D+A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + K PN Y TLI + R E EM++ GL + ++ + GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 196 KNCGKHDLAEKIEQLEVS 213
G D+A+KI + VS
Sbjct: 441 FQAGDCDMAQKIFKKMVS 458
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L + +L L+ A + +M++ P + FN L+ I K + + + + +
Sbjct: 48 REKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ 107
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
L D+ +Y ILI + + A +L +++ G+ P + ++ G +
Sbjct: 108 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 167
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A ++ + + PN + TLI + EA + M G P + V
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 193 DGLKNCGKHDLA 204
+GL G DLA
Sbjct: 228 NGLCKRGDIDLA 239
>gi|399107200|gb|AFP20364.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 105 VEEALD-YFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 164 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ G +E+A Q++N+M +G PD+ T+N +I ++C ++ +++
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ V TY ILI A G I+EA +LL ++ G P Y II+G +
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +D+ +E+ +G PN+ Y+ LI+ R GR EA + L M E LTP +
Sbjct: 255 EGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYS 314
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVS 213
+D + L G+ DLA I +S
Sbjct: 315 YDPLISALCKEGRLDLAIGIMDYMIS 340
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ + G + A +++ +M+ +G PD+ T+N++I +CK G + ++
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKL 264
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G + TY ILI ++ + G IDEA +L ++E P Y P+I +
Sbjct: 265 VAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCK 324
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ D A + G P+ Y T++ + G +A ++ MG P
Sbjct: 325 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 380
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + ++++ L N L A +++++++ P + T+ LIE G
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGG 222
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY +I + K GM DE +L+ + G P Y+
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSI 282
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ D+A + K P+ Y LI+ + GR A + M G
Sbjct: 283 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 342
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + L G + A +I
Sbjct: 343 CLPDIVNYNTILAALCKNGNANQALEI 369
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ L G ++ A ++ MI++ PD +++ LI +CK G
Sbjct: 268 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV------EDGHNPF 114
++ + + + G D+ Y ++ A+ K G ++A + + L DG
Sbjct: 328 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNDGERKL 387
Query: 115 PSLYAPIIKG 124
S P G
Sbjct: 388 WSWQIPFFLG 397
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 92/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ LV+ L G A + + M ++G PD+ +++ ++ + K E
Sbjct: 420 MRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQE 479
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ +C G C DV Y ILI + K I EA LLH + E G P Y
Sbjct: 480 VDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNT 539
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + ++A F S + K PN Y+TLI GR +A EM G
Sbjct: 540 LIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKG 599
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP S + GL NCG+
Sbjct: 600 CTPSSIAYMAFIHGLSNCGR 619
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++GF P + + GL+ ++ A ++ + QG PD+ +N LI+ +CK+
Sbjct: 455 MAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQR 514
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + + G TY LI + K ++EA L ++E P Y+
Sbjct: 515 IAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYST 574
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ DDA ++E+ KG P+ Y I GR EA YL EM E
Sbjct: 575 LINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEERE 634
Query: 181 LTP 183
+ P
Sbjct: 635 MKP 637
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 35/216 (16%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE----FCVEMYYS 70
+++ GL+ G L+ A + M + G PDL +N+LI+ +C S ++ EM S
Sbjct: 329 IVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEES 388
Query: 71 ---------------VCKL----------------GSCADVSTYKILIPAVSKAGMIDEA 99
+C+ G + L+ + K G EA
Sbjct: 389 GIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEA 448
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+ L ++ E+G P Y+ + G + + D A F +I +G+ P+ Y LI
Sbjct: 449 CKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKG 508
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ R EA N L EM E GL P + ++ + DGL
Sbjct: 509 LCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGL 544
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P+ TF+ +I + K+G+++ V ++ + ++G D+ Y LI + + + E+ L
Sbjct: 322 PNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGL 381
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L + E G P I RR A +++I GH P T+L+ +
Sbjct: 382 LQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCK 441
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G+ VEA +L++M E G P + DGL + D A K+ Q
Sbjct: 442 HGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQ 488
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P V ++L++GL + A+ ++++M ++G P T+N+LI+ +CK+ +E
Sbjct: 493 QGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEE 552
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + +V TY LI + AG D+A L + + G P Y I
Sbjct: 553 AMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIH 612
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ ++A + E++ + P+ VY L+ A L EM + G P
Sbjct: 613 GLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFP 672
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + D+++ GL ++ A + ++M PD++ LI + K E
Sbjct: 196 MKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEE 255
Query: 61 VE-FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH-----NLVEDGH--- 111
+ F EM+ + A Y ++ ++ G + +A+ LL N + DG
Sbjct: 256 LTCFFEEMHED---MDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGK 312
Query: 112 --------NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
P + ++ +I G + G D A F ++ G P+ +Y LI
Sbjct: 313 LFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTS 372
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
R E+ L EM E G+ P S + + L C +HD++ + L+
Sbjct: 373 NRLQESCGLLQEMEESGIEPTSFTNNCIFGCL--CRRHDISGALHLLK 418
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ GL +LE A ++ MI++ +P++ T+++LI +C +G
Sbjct: 525 MEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGR 584
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + G Y I +S G +EA L + E P +Y
Sbjct: 585 PDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVG 644
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
++ AF E+ KG P+
Sbjct: 645 LLNAFLVDSNQPLAFEILQEMVDKGKFPD 673
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G+ ++Q N + A + N++ +G D F+ L+ K G+
Sbjct: 92 MHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGW-VDEYVFSILVLAFSKWGK 150
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ ++ + + T+ LI K +D+A L + + G P SLY
Sbjct: 151 VDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDV 210
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
II G A C +SE+K P+ + T LI+
Sbjct: 211 IIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLIS 248
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 20/207 (9%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV G ++ A +++ M ++ + +TF SLI K V+ + ++ + K
Sbjct: 140 ILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKS 199
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+S Y ++I + + +A L + P + +I + +
Sbjct: 200 GFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELT-- 257
Query: 135 FCFFSEIKIKGHP-PNRPVYTTLITMCGRGGRFVEAANYLMEMT--------EMG----- 180
CFF E+ P + +Y +++ G +A + L +T E+G
Sbjct: 258 -CFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRG 316
Query: 181 ---LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S F +V +GL G DLA
Sbjct: 317 KAMVPPNSTTFSIVINGLIKTGDLDLA 343
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 89/194 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ + AGY + A + M + G PD TFN L+ K+ V+ +++ +
Sbjct: 95 LIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN 154
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY ILI AV K G +++A ++ ++ G P Y +I G + G D AF
Sbjct: 155 CSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAF 214
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +G R VY +LI GR GR AA EM GL P F + GL
Sbjct: 215 FLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGL 274
Query: 196 KNCGKHDLAEKIEQ 209
G+ A +I Q
Sbjct: 275 GVAGRASEARRIFQ 288
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL +G ++A ++ +M+ +G PD TF SL+ + +G ++ +G
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV+ Y +LI + K+ +DEA+ + L EDG P + ++ G + G+ DAF
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
++K G P+ VY TLI + GR EA L+EM +G P ++ + D
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ A ++S ++ +M Q P++ T++ LI+ +CK G
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++++ + G ++ TY +I + K+G +D+AF L + +G +Y
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ D A F E+ KG P+ +T+L+ G GR EA E ++G
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++++ D L + D A +I
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEI 321
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P LV GL AG A+++ + G D+ +N LI+T+CKS
Sbjct: 255 MLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKR 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + + G DV T+ L+ + K+G I +AF LL ++ G P ++Y
Sbjct: 315 LDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNT 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++A E++ G+ P+ Y TLI +GGR +A E++ G
Sbjct: 375 LIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG 434
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + +GL G+ D A K+
Sbjct: 435 FAN-TVTYNTILNGLCMAGRVDEAYKL 460
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 1/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P V +L+ + G +E A ++ M +G P++ T+ S+I+ + KSG
Sbjct: 150 MQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGH 209
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G A Y LI + ++G D A +L ++ G P +
Sbjct: 210 VDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTS 269
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +A F E + G + +Y LI + R EA E+ E G
Sbjct: 270 LVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDG 329
Query: 181 LTPISRCFDLVTDGLKNCGK-HD 202
L P F+ + DGL G+ HD
Sbjct: 330 LVPDVYTFNALMDGLCKSGRIHD 352
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ GL +G +E A Q++ +M G +PD+ T+N+LI+ CK G
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL----VEDGHNPFPS 116
+E + ++ + G A+ TY ++ + AG +DEA++L + + V+ +P
Sbjct: 420 IEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFV 478
Query: 117 LYAPIIKGAFRRG 129
Y ++ GA + G
Sbjct: 479 TYTTLLNGARQAG 491
>gi|341606837|gb|AEK83521.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606869|gb|AEK83537.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606977|gb|AEK83591.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606979|gb|AEK83592.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606981|gb|AEK83593.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606983|gb|AEK83594.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606985|gb|AEK83595.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606987|gb|AEK83596.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606989|gb|AEK83597.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606991|gb|AEK83598.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606993|gb|AEK83599.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606995|gb|AEK83600.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606997|gb|AEK83601.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606999|gb|AEK83602.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607001|gb|AEK83603.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607003|gb|AEK83604.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607005|gb|AEK83605.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607007|gb|AEK83606.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607009|gb|AEK83607.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607011|gb|AEK83608.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607013|gb|AEK83609.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607015|gb|AEK83610.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 173
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 182
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y G S + + DGL G+
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 135
Query: 202 DLAEKI 207
D AE++
Sbjct: 136 DEAERL 141
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 100 VEEALD-YFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 158
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 159 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
>gi|341606831|gb|AEK83518.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606833|gb|AEK83519.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606835|gb|AEK83520.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606839|gb|AEK83522.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606841|gb|AEK83523.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606843|gb|AEK83524.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606845|gb|AEK83525.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606847|gb|AEK83526.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606849|gb|AEK83527.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606851|gb|AEK83528.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606853|gb|AEK83529.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606855|gb|AEK83530.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606857|gb|AEK83531.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606859|gb|AEK83532.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606861|gb|AEK83533.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606863|gb|AEK83534.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606865|gb|AEK83535.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606867|gb|AEK83536.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606871|gb|AEK83538.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606873|gb|AEK83539.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606875|gb|AEK83540.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606877|gb|AEK83541.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606879|gb|AEK83542.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606881|gb|AEK83543.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606883|gb|AEK83544.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606885|gb|AEK83545.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606887|gb|AEK83546.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606889|gb|AEK83547.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606891|gb|AEK83548.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606893|gb|AEK83549.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606895|gb|AEK83550.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606897|gb|AEK83551.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606899|gb|AEK83552.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606901|gb|AEK83553.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606903|gb|AEK83554.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606905|gb|AEK83555.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606907|gb|AEK83556.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606909|gb|AEK83557.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606911|gb|AEK83558.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606913|gb|AEK83559.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606915|gb|AEK83560.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606917|gb|AEK83561.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606919|gb|AEK83562.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606921|gb|AEK83563.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606923|gb|AEK83564.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606925|gb|AEK83565.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606927|gb|AEK83566.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606929|gb|AEK83567.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606931|gb|AEK83568.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606933|gb|AEK83569.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606935|gb|AEK83570.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606937|gb|AEK83571.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606939|gb|AEK83572.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606941|gb|AEK83573.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606943|gb|AEK83574.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606945|gb|AEK83575.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606947|gb|AEK83576.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606949|gb|AEK83577.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606951|gb|AEK83578.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606953|gb|AEK83579.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606957|gb|AEK83581.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606959|gb|AEK83582.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606961|gb|AEK83583.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606963|gb|AEK83584.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606965|gb|AEK83585.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606967|gb|AEK83586.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606969|gb|AEK83587.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606971|gb|AEK83588.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606973|gb|AEK83589.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606975|gb|AEK83590.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 173
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 182
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y G S + + DGL G+
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 135
Query: 202 DLAEKI 207
D AE++
Sbjct: 136 DEAERL 141
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 100 VEEALD-YFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 158
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 159 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
>gi|341605747|gb|AEK82976.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605749|gb|AEK82977.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605751|gb|AEK82978.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L++GL +A E A+ ++ +M + D TFN L++ +C++G
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG ++ DA S++ +G PPN + TLI + G +A L +M G
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+P + V DGL G D E +E L V ++
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTD--EALELLNVMVK 525
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P ++++GL +A A++++++MI+QG P+ TFN+LI +CK G
Sbjct: 418 MAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG DEA LL+ +V+ G +P +Y+
Sbjct: 478 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSS 537
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G+ + F I+ + +Y +I+ + G A +L M G
Sbjct: 538 IASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSG 597
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ GL + G A++I
Sbjct: 598 CVPNESTYTILIRGLASEGFVKEAQEI 624
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 89/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV L G ++ +++ +M++ G PD+ T+ ++I CK G ++ V + S+
Sbjct: 361 NILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAA 420
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + A +A L+ +++ G P P + +I ++G +
Sbjct: 421 CGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 480
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G EA L M + G++P + + +
Sbjct: 481 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIAS 540
Query: 194 GLKNCGK 200
L G+
Sbjct: 541 ALSGEGR 547
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 7/184 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV+ L G + A +++ M ++G P ++ +E C++ V + + G
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPIIKG---AFRRGQF 131
DV +++ AV G +DEA RLL +L+ G P Y +++G A R G
Sbjct: 177 CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHV 236
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
D E+ G PPN ++TLI R G F +M E G P R + +
Sbjct: 237 QD---LMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATI 293
Query: 192 TDGL 195
DG+
Sbjct: 294 IDGV 297
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + +++GL A + ++ +M+ G P++ TF++LI +C++G E
Sbjct: 212 GCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERV 271
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ + + G DV Y +I V K ++ A +L+ + G +P Y ++KG
Sbjct: 272 HEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKG 331
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++++A +E+ K P + + L+ + G L +M E G P
Sbjct: 332 LCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPD 391
Query: 185 SRCFDLVTDG 194
+ V +G
Sbjct: 392 VITYTTVING 401
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 4/178 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ G G ++ A ++ M G P+ ++ +++ +C +
Sbjct: 383 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAER 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + + G + T+ LI + K G++++A LL ++ +G +P Y+
Sbjct: 443 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G D+A + + KG PN +Y+++ + GR N +++M E
Sbjct: 503 VIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRI----NKVIQMFE 556
>gi|399107198|gb|AFP20363.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 105 VEEALD-YFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 164 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
>gi|399107192|gb|AFP20360.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 105 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 164 ALIDALTKHGKVDEAMXLFKRME-EEEGCDQTVYTYTILISG 204
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 187
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSXFYSSLIDGLGKAGRIDEAERL 146
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+QGL AG + A+++ KM+ G PD+ T++ L++ +CK G+
Sbjct: 405 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 464
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + K D+ TY I+I + KAG +++ + L +L G P +Y
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G ++A F E+K G PN Y TLI R G +A + EM G
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584
Query: 181 L----TPISRCFDLVTDG 194
+ IS +++ DG
Sbjct: 585 FVGDASTISMVINMLHDG 602
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 1/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L++G A +E ++ +M ++G + T+N+LI+ + ++G+ + ++
Sbjct: 377 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 436
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ TY IL+ + K G +++A + L + P Y +I+G +
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +D + F + +KG PN +YTT+I+ R G EA EM E G P S
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556
Query: 188 FD-LVTDGLKNCGKHDLAEKIEQLE 211
++ L+ L++ K AE I+++
Sbjct: 557 YNTLIRARLRDGDKAASAELIKEMR 581
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V L+ + G L A+++ ++MIK+ DPD+ T++SLI C
Sbjct: 300 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 359
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M+ + +V TY LI KA ++E L + + G Y
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 419
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F+ G D A F ++ G PP+ Y+ L+ + G+ +A + +
Sbjct: 420 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 479
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++ +G+ GK
Sbjct: 480 MEPDIYTYNIMIEGMCKAGK 499
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + L++ L N G A ++++ MI++ +P++ TF++LI+ K G+
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + K D+ TY LI +DEA + ++ P Y
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + ++ F E+ +G N Y TLI + G A +M G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ DGL GK + A
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKA 468
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+ P + L+ GL A ++++M+ +G PDL T+ +++ +CK G+++ +
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + K ADV Y +I A+ +++A L + G P Y +I+
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G++ DA S++ + PN ++ LI + G+ VEA EM + + P
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ + +G + D A+ + +L +S
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMIS 372
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + L+ G + + A +V++M P+ TFN+LI + +
Sbjct: 125 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 184
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D+ TY ++ + K G ID A LL + + +Y
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II +DA F+E+ KG PN Y +LI GR+ +A+ L +M E
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + D GK AEK+
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKL 331
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L N + A + +M +G P++ T+NSLI +C G + + +
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T+ LI A K G + EA +L +++ +P Y+ +I G + D+A
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + K PN Y TLI + R E EM++ GL + ++ + GL
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Query: 196 KNCGKHDLAEKIEQLEVS 213
G D+A+KI + VS
Sbjct: 425 FQAGDCDMAQKIFKKMVS 442
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L + +L L+ A + +M++ P + FN L+ I K + + + + +
Sbjct: 32 REKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ 91
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
L D+ +Y ILI + + A +L +++ G+ P + ++ G +
Sbjct: 92 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 151
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A ++ + + PN + TLI + EA + M G P + V
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 211
Query: 193 DGLKNCGKHDLA 204
+GL G DLA
Sbjct: 212 NGLCKRGDIDLA 223
>gi|341606955|gb|AEK83580.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 173
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 182
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y G S + + DGL G+
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 135
Query: 202 DLAEKI 207
D AE++
Sbjct: 136 DEAERL 141
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 100 VEEALD-YFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 158
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 159 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS NP V ++L+ GL G ++ A +++ MIKQG +P++ T+ SL++ E
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKE 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ G +V +Y ++I + K M+DEA +L + P Y+
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSS 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D + EI +G P N Y +L+ + + +A L +M + G
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + + DGL G+ A++I Q
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQ 463
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G P V +++ GL ++ A ++ +M + P+ T++SLI+ +CKSG
Sbjct: 325 ISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGR 384
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G A++ TY L+ + K +D+A LL + ++G P S Y
Sbjct: 385 ISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTT 444
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA + ++ KG+P N +YT +I + G F EA + L +M + G
Sbjct: 445 LVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNG 504
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + L K+ A K+
Sbjct: 505 CMPDAVTYETLISALFKNNKNGKAVKL 531
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P L+ GL +G + +++++ +G ++ T+NSL+ +CK+ +
Sbjct: 360 MHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQ 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D+STY L+ + K G + +A R+ +L+ G+ +Y
Sbjct: 420 VDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTV 479
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + G FD+A S+++ G P+ Y TLI+ + + +A L EM
Sbjct: 480 MINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 7/218 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ + L A MV K++K G PD T N+L+ +C +G+
Sbjct: 79 MELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGK 138
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH---NPFPSL 117
V+ + + V + D +Y LI + K+G A +LL + +G P +
Sbjct: 139 VKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIM 196
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y II + DA+ +SE+ +K PN + +LI G+ EA L EM+
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P F+++ DGL C + ++ + L V ++
Sbjct: 257 LNNVNPNVYTFNILIDGL--CKEGEVKKATSVLSVMIK 292
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + ++MI + P++ TFNSLI C G+++ V + + +V T+ ILI
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ K G + +A +L +++ G P Y ++ G F + + A F+ I ++G P
Sbjct: 273 GLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK-HDLAEKI 207
N Y+ +I + EA EM +TP + + + DGL G+ D+ + I
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392
Query: 208 EQLE 211
+++
Sbjct: 393 DEIN 396
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + LV GL G L+ A+++ ++ +G ++ + +I +CK G
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGF 489
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+ + + + G D TY+ LI A+ K +A +LL ++
Sbjct: 490 FDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMI 536
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGY-LESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M G P + + L+ L + + +E A+++ +KM + +P+L+++ LIE +
Sbjct: 180 MEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQ 239
Query: 60 EV----EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+ E C EM G DV TY I+I A KA DEA + H+++ NP P
Sbjct: 240 NLLKVDEVCREMKDD----GFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSP 295
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
+Y I G + D+AF FF + K G PP P Y +++ R +A + E
Sbjct: 296 HIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGE 355
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
M E+G+ P +R +D++ L G+ A + Q
Sbjct: 356 MKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQ 389
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 7/216 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP + GL N ++ A + K G P+ T+N+++ C S
Sbjct: 286 MLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMR 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFPSLYA 119
++ + + +LG + TY I++ + K G EA+ + + E G P S YA
Sbjct: 346 IDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYA 405
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+++ Q D A ++E+K KG P +++TLI + +A Y +M ++
Sbjct: 406 IMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDV 465
Query: 180 GLTPISRCFD-----LVTDGLKNCGKHDLAEKIEQL 210
G+ P + F L+ G++N H A+K+++L
Sbjct: 466 GIRPTANMFSAFKRALMAAGMENTVIH-FAKKVDKL 500
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G ++L+QGL AG + A+++ +M+ G P++ T+N+L++ +CK+G+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + + + TY I+I + KAG +++ + L NL G P Y
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G ++A F E+K G PN Y TLI R G +A + EM G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 181 LTPISRCFDLVTDGLKN 197
+ LVT+ L +
Sbjct: 602 FAGDASTIGLVTNMLHD 618
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + L+ G ++ + A +V++M G P+ TFN+LI + +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D+ TY +++ + K G D AF LL+ + + P +Y
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA F E++ KG PN Y++LI+ GR+ +A+ L +M E
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + D GK AEK+
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKL 348
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 36/247 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + L+ G L+ AKQM M+ + PD+ T+N+LI+ CK
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF------ 114
VE +E++ + + G + TY ILI + +AG D A + +V DG P
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 115 ---------------------------PSLYA--PIIKGAFRRGQFDDAFCFFSEIKIKG 145
P++Y +I+G + G+ +D + F + +KG
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD-LVTDGLKNCGKHDLA 204
P+ Y T+I+ R G EA EM E G P S C++ L+ L++ + A
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 205 EKIEQLE 211
E I+++
Sbjct: 592 ELIKEMR 598
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V L+ + G L A+++ ++M+K+ DP + T++SLI C
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+ + DV TY LI K ++E + + + G Y
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F+ G D A F E+ G PPN Y TL+ + G+ +A +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++ +G+ GK
Sbjct: 497 MEPTIYTYNIMIEGMCKAGK 516
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V + ++ GL +++ A + +M +G P++ T++SLI +C G
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV T+ LI A K G + EA +L +V+ +P Y+
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F + K P+ Y TLI + R E EM++ G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L + ++++ GL G D+A++I + VS
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ L N G A ++++ MI++ +PD+ TF++LI+ K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + K + TY LI +DEA ++ +V P Y
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + ++ F E+ +G N Y LI + G A EM G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++ + DGL GK + A
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 4/201 (1%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L + L+ L+ A + +M+K P + F+ L+ I K + + + + +
Sbjct: 49 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 108
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
LG + TY ILI + + A +L +++ G+ P + ++ G +
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A ++ + G+ PN + TLI + EA + M G P + +V
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 193 DGLKNCGKHDLA----EKIEQ 209
+GL G DLA K+EQ
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQ 249
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T++ LI C+ ++ + + + KLG ++ T L+ + I EA L+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGR 165
G+ P + +I G F + +A + KG P+ Y ++ +C RG
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ A N L +M + L P ++ + DGL
Sbjct: 238 DL-AFNLLNKMEQGKLEPGVLIYNTIIDGL 266
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V +QGL G ++ A +M +M ++G +P+ +LI+ CK G+
Sbjct: 175 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 234
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E+ + + G AD+ Y L+ + + A ++ + +DG P Y
Sbjct: 235 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 294
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A E+ +G + YT LI+ + GR V+A L EM E G
Sbjct: 295 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 354
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + + +V D C D+ + L+
Sbjct: 355 LQPDNTTYTMVIDAF--CKNGDVKTGFKHLK 383
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G + + LV G +++A +V +M K G PD T+ +LI+ CK GE
Sbjct: 245 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 304
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +EM + G D TY LI +SKAG +A R+L ++E G P + Y
Sbjct: 305 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G F E++ KG P Y ++ G+ A L M +G
Sbjct: 365 VIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 424
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P ++++ DG +C KH E+L+
Sbjct: 425 VCPNDITYNILLDG--HC-KHGKVRDTEELK 452
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 37/250 (14%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P R ++L++ ++ +G L SA+ + ++M+++G P + TFN+L+ +CK+ ++
Sbjct: 107 DAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLN 166
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + K G DV TY I + K G I +A + + E G NP + +I
Sbjct: 167 NANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLI 226
Query: 123 KGAFRRGQFD-------------------------DAFC----------FFSEIKIKGHP 147
+ G + FC E++ G
Sbjct: 227 DAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLK 286
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P++ YTTLI C + G A EM++ G+ + + GL G+ AE+I
Sbjct: 287 PDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERI 346
Query: 208 --EQLEVSLR 215
E +E L+
Sbjct: 347 LCEMMEAGLQ 356
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G NP L+ G + + ++ +M +G DL +N+L+ C+ +
Sbjct: 210 MCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRD 269
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G D TY LI K G +D A + + ++G Y
Sbjct: 270 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 329
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT +I + G +L EM G
Sbjct: 330 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 389
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P +++V +G + G+ A+ +
Sbjct: 390 KNPGIVTYNVVMNGFCSLGQMKNADML 416
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L++G A ++ AKQ+ N+MI QG PD +N+LI +C+ G
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGR 425
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ ++ G+ D+ TY +L+ K G + +AFRL + P ++Y
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNI 485
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G DA FSE+ ++G PN +YTT+I + G EA M G
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545
Query: 181 LTPISRCFDLVTDGL 195
P ++++ G
Sbjct: 546 CPPDEFSYNVIIRGF 560
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P + + L+QGL N + A ++N+M P++ TFN L++ ICK G+
Sbjct: 261 MKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ ++G DV TY L+ S I EA +L ++ G P Y
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + D+A F+E+ +G P+ Y TLI + GR EA + M G
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440
Query: 181 LTPISRCFDLVTDGL 195
P + ++ DG
Sbjct: 441 NLPDLFTYSMLLDGF 455
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + +L+ + ++ A + +KMIK G PD TFN+LI +CK G+
Sbjct: 121 MELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGK 180
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + G V TY +I + K G A L + E G P Y
Sbjct: 181 FAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNI 240
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + ++A FS +K K P+ Y +LI R+ EA+ L EMT +
Sbjct: 241 LIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN 300
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F+++ D + GK A+ +
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGV 327
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++L+ L + A + + M + PD+ T+NSLI+ +C
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + L ++ T+ +L+ A+ K G + EA + + E G P Y+
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + +A F + KG P+ Y LI + R EA EM G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405
Query: 181 LTPISRCFDLVTDGLKNCGK 200
LTP + ++ + GL G+
Sbjct: 406 LTPDNVNYNTLIHGLCQLGR 425
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V L+ G + A+++ + MI +G PD ++N LI+ CK+
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G D Y LI + + G + EA L N+ +G+ P Y+
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G AF F ++ P+ +Y LI + G +A E+ G
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + + + + L C + L E +E
Sbjct: 511 LLPNVQIYTTIINNL--CKEGLLDEALE 536
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ GL G A + + G P + T+ ++I +CK GE
Sbjct: 160 GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAA 219
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G +V TY ILI ++ K +++EA + + +P Y +I+G
Sbjct: 220 AGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQG 279
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +A +E+ PN + L+ + G+ EA MTEMG+ P
Sbjct: 280 LCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEP 338
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ P + ++LV + G + A+ + M + G +PD+ T++SL+ E
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ ++ G D +Y ILI KA IDEA +L + ++ G P Y
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + G+ P+ Y+ L+ + G +A M
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++++ D + G A K+
Sbjct: 476 LKPDIAMYNILIDAMCKFGNLKDARKL 502
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ G GYL A ++ M PD+ +N LI+ +CK G
Sbjct: 436 MHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN 495
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G +V Y +I + K G++DEA N+ DG P Y
Sbjct: 496 LKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNV 555
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + A E++ +G
Sbjct: 556 IIRGFLQYKDESRAAQLIGEMRDRG 580
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 1/183 (0%)
Query: 16 LVQGLLNAG-YLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+ ++ G Y + + +M G PD+ T + LI+ V+ ++ + KL
Sbjct: 100 LLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKL 159
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D T+ LI + K G +A + G P Y II G + G+ A
Sbjct: 160 GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAA 219
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F +++ G PN Y LI + EA + M ++P ++ + G
Sbjct: 220 AGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQG 279
Query: 195 LKN 197
L N
Sbjct: 280 LCN 282
>gi|399107204|gb|AFP20366.1| At1g03560-like protein, partial [Capsella grandiflora]
gi|399107210|gb|AFP20369.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 105 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 164 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 204
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSXFYSSLIDGLGKAGRIDEAERL 146
>gi|260780352|gb|ACX50722.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 37/145 (25%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVED 109
LI A++K G +DEA L + E+
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRMEEE 186
>gi|341606829|gb|AEK83517.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK B A
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEA 173
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRMEE 182
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y G S + + DGL G+
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRI 135
Query: 202 DLAEKI 207
D AE++
Sbjct: 136 DEAERL 141
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 100 VEEALD-YFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 158
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +BEA L + E+G + Y +I G F+
Sbjct: 159 ALIDALTKHGKVBEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
>gi|341605745|gb|AEK82975.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRXNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|341605737|gb|AEK82971.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605739|gb|AEK82972.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605741|gb|AEK82973.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 185
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRXNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|341605711|gb|AEK82958.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605785|gb|AEK82995.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605787|gb|AEK82996.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605789|gb|AEK82997.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605793|gb|AEK82999.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605795|gb|AEK83000.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V L+ L+N+G E A+ + K++++G D +N LI +SG+++ +E
Sbjct: 62 SPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAME 121
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
M+ + GS D TY L+ A+ KAG + EA ++E G P Y ++ AF
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTY-NLLMDAF 180
Query: 127 RR-GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
R+ GQ D A F+E+K +G P+ Y L+ GR A +MT G +P S
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
+ + +GL G+ + A K+
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKV 262
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P LV L AG ++ A+ + M+++G P++ T+N L++ K G+
Sbjct: 126 MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQ 185
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G V TY IL+ A+ AG + A +L H + DG +P Y+
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST 245
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ ++A F E+ +G + Y +L+ + G + EM+ G
Sbjct: 246 LVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG 305
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + D L K D A ++
Sbjct: 306 FHPDAFSFNTIMDALGKANKPDAAREV 332
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P V ++L+ L +AG + +A+++ +KM G PD T+++L+ + KSG
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGR 255
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ + G D+ Y L+ ++KAG +D ++L+ + G +P +
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNT 315
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + + D A F+ + G P+ Y LI R G +A L EM E G
Sbjct: 316 IMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
P ++ ++ + L G+ D A + E++E +
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 98/195 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + + L+ L AG ++ +++ +M ++G PD +FN++++ + K+ +
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + G D+ +Y ILI + ++ G +A ++L +VE G P Y
Sbjct: 326 PDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNS 385
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I GQ D+AF E++ G P+ Y L+ M G+ G AA +M + G
Sbjct: 386 LIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG 445
Query: 181 LTPISRCFDLVTDGL 195
+ P + + + DGL
Sbjct: 446 VEPDTLSYAVRIDGL 460
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KGF+P + ++ L A ++A+++ +M++ G PDL ++N LI++ + G+
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGD 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + + G + TY LI ++ G +DEAF +L + G P Y
Sbjct: 361 AAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ +RG+ A F ++K KG P+ Y I R EA +M +G
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ ++ G +L +++
Sbjct: 481 CPVDKAMYRILIRAAHRAGDTELEAQLKH 509
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L + G L+ + ++ +M+ +G T LI + + +++
Sbjct: 5 LASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPT 64
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V + LI + +G + A + LV+ G Y +I+ R GQ D A F
Sbjct: 65 VHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR 124
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
E+KIKG P+ Y L+ G+ GR EA ++ M E GLTP ++L+ D + G
Sbjct: 125 EMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVG 184
Query: 200 KHDLA 204
+ D+A
Sbjct: 185 QLDMA 189
>gi|399107188|gb|AFP20358.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK B A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEA 178
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRMEE 187
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 105 VEEALD-YFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +BEA L + E+G + Y +I G F+
Sbjct: 164 ALIDALTKHGKVBEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
>gi|260780314|gb|ACX50703.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780316|gb|ACX50704.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780320|gb|ACX50706.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780322|gb|ACX50707.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780326|gb|ACX50709.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780328|gb|ACX50710.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780334|gb|ACX50713.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780336|gb|ACX50714.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780350|gb|ACX50721.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780354|gb|ACX50723.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780356|gb|ACX50724.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780360|gb|ACX50726.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780362|gb|ACX50727.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780364|gb|ACX50728.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780366|gb|ACX50729.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780368|gb|ACX50730.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780370|gb|ACX50731.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780372|gb|ACX50732.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780374|gb|ACX50733.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780376|gb|ACX50734.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780378|gb|ACX50735.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780380|gb|ACX50736.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780382|gb|ACX50737.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780384|gb|ACX50738.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780386|gb|ACX50739.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780390|gb|ACX50741.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780392|gb|ACX50742.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGVQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I + G+ D+A F ++ + ++ VYT I
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTI 198
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGVQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGVQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG ++Q S + +M ++G F+ +I +CK G+
Sbjct: 283 METKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGK 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ + GS +V+ Y +LI +K G +++A RLLH ++++G NP Y+
Sbjct: 343 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSV 402
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ ++A +F + G N Y++LI G+ GR EA EM+E G
Sbjct: 403 VVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
T S C++ + D GK D A
Sbjct: 463 CTRDSYCYNALIDAFTKHGKVDEA 486
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G +E A +++++MI +G +PD+ T++ ++ +CK+G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGR 412
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +DEA RL + E G Y
Sbjct: 413 VEEAMD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 472 ALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMID 531
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+TP + C ++ GL GK A KI
Sbjct: 532 KGITPTAACLRALSTGLCLSGKVARACKI 560
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ GL++A +++SA+++ M PD+ T+N++I+ CK+G+
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQ 272
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + G AD TY +I A L + E G P ++
Sbjct: 273 TQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSL 332
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++ + F + KG PN +YT LI + G +A L M + G
Sbjct: 333 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEG 392
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + +V +GL G+ + A
Sbjct: 393 FNPDVVTYSVVVNGLCKNGRVEEA 416
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
NSLI++ K G VE + ++ + + G + TY L+ + A +D A R+ +
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 109 DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
P Y +IKG + GQ A ++ KG ++ Y T+I C F
Sbjct: 251 GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSS 310
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EM E GL F LV GL GK
Sbjct: 311 CVALYQEMDEKGLQVPPHAFSLVIGGLCKEGK 342
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L GL +G + A ++++++ G D +I T+CK+G
Sbjct: 529 MIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGR 587
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ ++ + + G ++I A+ K G D A +L+H+ + G+ S+
Sbjct: 588 IKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSV 644
>gi|341605777|gb|AEK82991.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605779|gb|AEK82992.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605809|gb|AEK83007.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605811|gb|AEK83008.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEA 176
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALXKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEE 185
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
>gi|341605731|gb|AEK82968.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605733|gb|AEK82969.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605735|gb|AEK82970.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCRXNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|341605775|gb|AEK82990.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605807|gb|AEK83006.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEA 176
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALXKHGKVDEAMXLFKRME-EEEGCDQTVYTYTILISG 202
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
>gi|399107212|gb|AFP20370.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 105 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 164 ALIDALTKHGKVDEAMALFKRME-EEEGCDQTVYTYTILISG 204
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMALFKRMEE 187
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
>gi|399107206|gb|AFP20367.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 105 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 164 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 204
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
>gi|399107190|gb|AFP20359.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 105 VEEALD-YFQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 164 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 204
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSIFYSSLIDGLGKAGRIDEAERL 146
>gi|341605721|gb|AEK82963.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605821|gb|AEK83013.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + GL G+ D AE++
Sbjct: 121 NSMFYSSLIXGLGKAGRIDEAERL 144
>gi|341605765|gb|AEK82985.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605767|gb|AEK82986.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605769|gb|AEK82987.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605771|gb|AEK82988.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSI 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSIFYSSLIDGLGKAGRIDEAERL 144
>gi|341605713|gb|AEK82959.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605715|gb|AEK82960.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605717|gb|AEK82961.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605719|gb|AEK82962.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605755|gb|AEK82980.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605757|gb|AEK82981.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605759|gb|AEK82982.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605827|gb|AEK83016.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605829|gb|AEK83017.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
>gi|341605727|gb|AEK82966.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605729|gb|AEK82967.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
>gi|260780324|gb|ACX50708.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780342|gb|ACX50717.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780358|gb|ACX50725.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780388|gb|ACX50740.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I + G+ D+A F ++ + ++ VYT I
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTI 198
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
>gi|341605725|gb|AEK82965.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A ++++ MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
>gi|341605723|gb|AEK82964.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMXLFKRME-EEEGCDQTVYTYTILISG 202
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 185
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + GL G+ D AE++
Sbjct: 121 NSMFYSSLIXGLGKAGRIDEAERL 144
>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
Length = 849
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ LLV+ L G A + M+ +G PD+ ++++ ++ + K +
Sbjct: 551 MRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVKINK 610
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ +C G DV ++ ILI KAG ++EA+ LH + G P Y
Sbjct: 611 LDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNL 670
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G D A S++ + P YTTLI C GR +A EM E G
Sbjct: 671 LINEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKG 730
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P + + GL CGK D A
Sbjct: 731 CSPNRITYMAIVHGLCKCGKPDEA 754
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P + + GL+ L+ A ++ + +G PD+ + N LI+ CK+G+V
Sbjct: 589 EGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNE 648
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G +Y +LI K G ID+A L + E+ P Y +I
Sbjct: 649 AYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLIN 708
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ DDA ++E++ KG PNR Y ++ + G+ EA Y M E + P
Sbjct: 709 GCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCGKPDEALVYYHSMEEKEMKP 768
Query: 184 IS 185
S
Sbjct: 769 DS 770
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V ++L++G AG + A ++KM G P ++N LI CK+G+++
Sbjct: 624 RGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDK 683
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + +Y LI +G D+A L + + E G +P Y I+
Sbjct: 684 AILCLSQMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVH 743
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ D+A ++ ++ K P+ V LI F A N L E E G P
Sbjct: 744 GLCKCGKPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIP 803
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSD-----------------PDLETFNSLIETICKS 58
+++ L+NAG +ES ++ M+ S P+ +FN +I + K+
Sbjct: 406 VLKFLVNAGKVESTCYLLQLMMGNESRSDNIHILDIHQTFKKLLPNTASFNIVIHGLLKT 465
Query: 59 G---EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+ + + ++ + +LG D Y LI A+ K+ + E+++LL ++ + P
Sbjct: 466 TSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLLRDMEQSRLQPTH 525
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y I RR A E++ GH P T L+ + GR +EA+N+L +
Sbjct: 526 FTYNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLAD 585
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
M G P + DGL K D A ++ Q
Sbjct: 586 MVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQ 619
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L + L+ + +++ M + P T+NS+ +C+ + +E+ + G
Sbjct: 496 LIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRGHG 555
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ +L+ + K G EA L ++V +G P Y+ + G + + D A
Sbjct: 556 HEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVKINKLDRAL 615
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F +I +G P+ + LI + G+ EA N+L +M GL P + ++L+ +
Sbjct: 616 ELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEW 675
Query: 196 KNCGKHDLA 204
G D A
Sbjct: 676 CKNGDIDKA 684
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 62/149 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +LL+ G ++ A +++M ++ P + ++ +LI C SG
Sbjct: 656 MRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLINGCCNSGR 715
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + TY ++ + K G DEA H++ E P +
Sbjct: 716 PDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCGKPDEALVYYHSMEEKEMKPDSYVSVA 775
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+I + F AF E KG+ P+
Sbjct: 776 LIDAFISKHNFSMAFNILKETIEKGNIPD 804
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ P + L+ G N+G + AK + N+M ++G P+ T+ +++ +CK G+
Sbjct: 691 MNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCGK 750
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ + Y+S+ + D LI A AF +L +E G+ P P+
Sbjct: 751 PDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPDPT 806
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MSD+ F+P L+ GL +G L AKQ+ M G P+ +N LI K+GE
Sbjct: 884 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G D+ TY +L+ + G +DE L E G NP Y
Sbjct: 944 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNL 1003
Query: 121 IIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
II G + + ++A F+E+ K +G P+ Y +LI G G EA E+
Sbjct: 1004 IINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
GL P F+ + G GK + A + Q V+
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1097
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P + +LL+ GLL A +E A+ + ++ G PD+ T+N L++ KSG+++
Sbjct: 780 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKID 839
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPI 121
E+Y + + T+ I+I + KAG +D+A L ++L+ D +P Y P+
Sbjct: 840 ELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 899
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + G+ +A F + G PN +Y LI G+ G A M + G+
Sbjct: 900 IDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 959
Query: 182 TPISRCFDLVTDGLKNCGKHD 202
P + + ++ D L G+ D
Sbjct: 960 RPDLKTYSVLVDCLCMVGRVD 980
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G P V + L+ +G ++ ++ +M +P+ T N +I + K+G
Sbjct: 813 VKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGN 872
Query: 61 VEFCVEMYYSVCKLGSCADVS----TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
V+ +++YY L S D S TY LI +SK+G + EA +L + + G P +
Sbjct: 873 VDDALDLYYD---LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCA 929
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+Y +I G + G+ D A F + +G P+ Y+ L+ GR E +Y E+
Sbjct: 930 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFREL 989
Query: 177 TEMGLTPISRCFDLVTDGLKNCGK-HDLAEKI 207
E GL P C++L+ +GL GK H L E +
Sbjct: 990 KESGLNPDVVCYNLIINGL---GKFHRLEEAL 1018
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V +L+ L A L+ AK++ KM PD T+ +L++ + +
Sbjct: 286 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRD 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + K G DV T+ IL+ A+ KAG EAF L + + G P Y
Sbjct: 346 LDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNT 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + DDA F ++ G P Y I G+ G V A +M G
Sbjct: 406 LICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 465
Query: 181 LTP 183
+ P
Sbjct: 466 IAP 468
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF + L+ LL + + A ++ +MI G P L+T++SL+ + K +
Sbjct: 181 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRD 240
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + LG +V T+ I I + +AG I+EA+ +L + ++G P Y
Sbjct: 241 IESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 300
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + D A F+++K H P+R Y TL+ + EM + G
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDG 360
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P F ++ D L C + E +L+V
Sbjct: 361 HVPDVVTFTILVDAL--CKAGNFGEAFAKLDV 390
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + +G SA + KM +G P++ N+ + ++ K+G
Sbjct: 426 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++Y + +G D TY +++ SK G IDEA +LL +VE+ P +
Sbjct: 486 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNS 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ + D+A+ F +K P Y TL+ G+ G+ EA M + G
Sbjct: 546 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 605
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + D L + LA K+
Sbjct: 606 CPPNTITFNTLFDCLCKNDEVTLALKM 632
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + + L AG AKQ+ + G PD T+N +++ K GE
Sbjct: 461 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + DV LI + KA +DEA+++ + E P Y
Sbjct: 521 IDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 580
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A F + KG PPN + TL + A L +M +MG
Sbjct: 581 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 640
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++ + GL G+
Sbjct: 641 CVPDVFTYNTIIFGLVKNGQ 660
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + L+ GLL L+ A ++ + M G P T+ I+ KSG+
Sbjct: 391 MRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGD 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G ++ + +++KAG EA ++ + L + G P Y
Sbjct: 451 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K + G+ D+A SE+ P+ V +LI + R EA M M EM
Sbjct: 511 MMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 570
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P ++ + GL GK + E IE E
Sbjct: 571 LKPTVVTYNTLLAGLGKNGK--IQEAIELFE 599
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P ++ L+ GL +ES ++ +M G P++ TF I + ++G++
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 279
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + G DV TY +LI A+ A +D A + + H P Y ++
Sbjct: 280 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
D F+SE++ GH P+ +T L+ + G F EA L M + G+ P
Sbjct: 340 FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPN 399
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
++ + GL + D A +I
Sbjct: 400 LHTYNTLICGLLRVHRLDDALEI 422
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V + L+ GL G ++ A ++ M+++G P+ TFN+L + +CK+ E
Sbjct: 566 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 625
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++M + + +G DV TY +I + K G + EA H + + + F +L
Sbjct: 626 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTL-CT 684
Query: 121 IIKGAFRRGQFDDAF 135
++ G + G +DA+
Sbjct: 685 LLPGVVKAGLIEDAY 699
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ L AG + A +++ +M +G PD+ T+ LI+ +C + +
Sbjct: 251 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 310
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ C + ++ K G D TY L+ S +D + + +DGH P +
Sbjct: 311 LD-CAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFT 369
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ + G F +AF ++ +G PN Y TLI R R +A M +
Sbjct: 370 ILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESL 429
Query: 180 GLTPISRCFDLVTD 193
G+ P + + + D
Sbjct: 430 GVKPTAYTYIVFID 443
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ L A ++ A +M +M + P + T+N+L+ + K+G+++ +E+
Sbjct: 538 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 597
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G + T+ L + K + A ++L +++ G P Y II G +
Sbjct: 598 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 657
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
GQ +A CFF ++K + VY +T+C
Sbjct: 658 NGQVKEAMCFFHQMK-------KLVYPDFVTLC 683
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MSD G P ++L+ G AG ++A + +M+K+G PDL+T++ L++ +C G
Sbjct: 919 MSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 978
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSK---------------------------- 92
V+ + + + + G DV Y ++I + K
Sbjct: 979 VDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYN 1038
Query: 93 --------AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
AGM++EA ++ + + G P + +I+G G+ + A+ + +
Sbjct: 1039 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1098
Query: 145 GHPPNRPVYTTL 156
G PN Y L
Sbjct: 1099 GFSPNTGTYEQL 1110
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 81/194 (41%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +++ L G +E + + M K+ D T+ ++ + + G + + +
Sbjct: 124 NYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMRE 183
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y LI + K+ EA + ++ DG P Y+ ++ G +R +
Sbjct: 184 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIES 243
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
E++ G PN +T I + GR G+ EA L M + G P + ++ D
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 303
Query: 194 GLKNCGKHDLAEKI 207
L K D A+++
Sbjct: 304 ALCTARKLDCAKEV 317
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKS 58
M +KG V + L+ GL N G L+ A ++ + +++ G+ +PD+ TFN++I+ +CK
Sbjct: 211 MLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKE 270
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G ++ VE+Y ++ + GS ++ T ILI K+G+ID+A L + + G P + Y
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTY 330
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +I G + + A FS +KI G P Y TL+ + +A EM E
Sbjct: 331 SVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE 390
Query: 179 MGLTPISRCFDLVTDGLKNCGK-HDLAEKIEQLE 211
P + F+++ DG G H E + ++
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ 424
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V L+ G + G L+ K + ++M+++G P++ ++ LI CK G
Sbjct: 71 MKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGL 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G DV TY +I + K G +A L + E G P Y
Sbjct: 131 WREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNV 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DAF F + KG Y TLI G+ EA + E G
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250
Query: 181 --LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F+ V GL G+ D A +I
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEI 279
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 43 PDLETFNSLIETICKSGEVE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
PD+ ++N++I +CK +E VEM S C+ S TY IL+ + K G ++E
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNS----FTYCILMDGLCKEGRVEE 63
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A RLL + G +Y+ +I G +G D F E+ KG PN VY+ LI
Sbjct: 64 AMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN 123
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ G + EA L MTE G+ P + + GL G+
Sbjct: 124 GFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGR 165
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + ++ GL LE A ++ +M +P+ T+ L++ +CK G VE + +
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV Y LI G +D L ++E G +P +Y+ +I G +
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G + +A + +G P+ YT +I + GR +A + MTE G P +
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 188 FDLVTDGL 195
++++ +GL
Sbjct: 188 YNVLINGL 195
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +++ G L AK + ++M G P L +N+L+ ++CK +E
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQA 381
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + D ++ I+I KAG I A LL+++ + G P Y+ I
Sbjct: 382 RRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINR 441
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ GQ ++A F + G P+ VY +LI G E N L +M +MG+
Sbjct: 442 LSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 73/158 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + + L+ L LE A+++ +M + +PD +FN +I+ K+G+
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + ++G D TY I +SK G ++EA +++ G P +Y
Sbjct: 413 IHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDS 472
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
+IKG + ++ ++ G + + +++T
Sbjct: 473 LIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILT 510
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + L+ GL N G ++ A ++ N+M+K+G +P++ ++ ++I +CK+G
Sbjct: 158 GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMA 217
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V+++ + + G +V TY +I ++ K ++++A L +VE G P Y I+ G
Sbjct: 218 VDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHG 277
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ ++A F E+ + PN +T L+ + G EA MTE G+ P
Sbjct: 278 FCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPD 337
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
++ + DG C + + E + E+ +R
Sbjct: 338 ISTYNALMDGY--CLQRLMNEAKKVFEIMIR 366
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G + ++ AK ++ +M + +PD T+++L++ +C+ G
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ +C G ++ TY IL+ K G +DEA +LL ++ E P Y
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F G+ + A FS++ G P+ YT +I + G EA + +M + G
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543
Query: 181 LTPISRCFDLVTDGL 195
P S ++++ G
Sbjct: 544 FLPNSCSYNVMIQGF 558
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V ++L+ L +++ + ++ KM K G PD TFN+LI +C G+++ VE++
Sbjct: 128 VYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFN 187
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ K G +V +Y +I + K G A + + ++G P Y+ II +
Sbjct: 188 EMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR 247
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+DA F SE+ +G PPN Y +++ G+ EA EM + P + F
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFT 307
Query: 190 LVTDGL 195
++ DGL
Sbjct: 308 ILVDGL 313
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + +V G N G L A ++ +M+ + P+ TF L++ +CK G
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ + G D+STY L+ +++EA ++ ++ G P Y
Sbjct: 319 VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A +E+ K P+ Y+TL+ + GR EA N EM G
Sbjct: 379 LINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ DG G D A K+
Sbjct: 439 PHPNLVTYVILLDGFCKHGHLDEALKL 465
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV GL G + A+ + M ++G +PD+ T+N+L++ C + +++ + +
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +Y ILI K+ +DEA LL + NP Y+ +++G + G+ +A
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ G PN Y L+ + G EA L M E L P + ++ +G
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 195 LKNCGKHDLAEKI 207
+ GK ++A+++
Sbjct: 488 MFIAGKLEVAKEL 500
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
++ + N LI +C+ V+F V + + KLG D T+ LI + G I EA L
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ +V+ GH P Y +I G + G A F +++ G PN Y+T+I +
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+A +L EM E G+ P ++ + G N G+ + A ++
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRL 290
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ L + A + +++M+++G P++ T+NS++ C G+
Sbjct: 224 MEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQ 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + T+ IL+ + K GM+ EA + + E G P S Y
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNA 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + ++A F + KG P Y LI + R EA + L EM
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + + GL G+
Sbjct: 404 LNPDTVTYSTLMQGLCQLGR 423
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 12/216 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P + + L+ G + AK++ MI++G P ++N LI CKS
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
++ EMY+ D TY L+ + + G EA L + G +P
Sbjct: 389 MDEAKSLLAEMYHKALN----PDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLV 444
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y ++ G + G D+A +K K PN YT LI G+ A ++
Sbjct: 445 TYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKL 504
Query: 177 TEMGLTPISRCFDLVTDGLKNCG----KHDLAEKIE 208
G P R + ++ GL G +DL K+E
Sbjct: 505 FGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + +L+ G G+L+ A +++ M ++ +P++ + LIE + +G+
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G+ D+ TY ++I + K G+ DEA+ L + +DG P Y
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+I+G + A E+ K N + L+ +
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDL 592
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 67/161 (41%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M++ P + F + + K + V + + +V + ILI + +
Sbjct: 83 RMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLN 142
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D + +L + + G +P + +I G G+ +A F+E+ +GH PN YT
Sbjct: 143 HVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYT 202
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
T+I + G A + +M + G P + + D L
Sbjct: 203 TVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243
>gi|260765969|gb|ACX50015.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765971|gb|ACX50016.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765973|gb|ACX50017.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765975|gb|ACX50018.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765977|gb|ACX50019.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765979|gb|ACX50020.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765981|gb|ACX50021.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765983|gb|ACX50022.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765985|gb|ACX50023.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765987|gb|ACX50024.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765989|gb|ACX50025.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765991|gb|ACX50026.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765993|gb|ACX50027.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765995|gb|ACX50028.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765997|gb|ACX50029.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765999|gb|ACX50030.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766001|gb|ACX50031.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766003|gb|ACX50032.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766005|gb|ACX50033.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766007|gb|ACX50034.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766009|gb|ACX50035.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766011|gb|ACX50036.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766013|gb|ACX50037.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766015|gb|ACX50038.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766017|gb|ACX50039.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766019|gb|ACX50040.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766021|gb|ACX50041.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766023|gb|ACX50042.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766025|gb|ACX50043.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766027|gb|ACX50044.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766029|gb|ACX50045.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766031|gb|ACX50046.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766033|gb|ACX50047.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766035|gb|ACX50048.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766037|gb|ACX50049.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766039|gb|ACX50050.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766041|gb|ACX50051.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766043|gb|ACX50052.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766047|gb|ACX50054.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766049|gb|ACX50055.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780310|gb|ACX50701.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780312|gb|ACX50702.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780318|gb|ACX50705.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780330|gb|ACX50711.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780332|gb|ACX50712.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780338|gb|ACX50715.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780340|gb|ACX50716.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780344|gb|ACX50718.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780346|gb|ACX50719.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780348|gb|ACX50720.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780394|gb|ACX50743.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780396|gb|ACX50744.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780398|gb|ACX50745.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780400|gb|ACX50746.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780402|gb|ACX50747.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780404|gb|ACX50748.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780406|gb|ACX50749.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780408|gb|ACX50750.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780410|gb|ACX50751.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780412|gb|ACX50752.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780414|gb|ACX50753.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780416|gb|ACX50754.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780418|gb|ACX50755.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780420|gb|ACX50756.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780422|gb|ACX50757.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780424|gb|ACX50758.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I + G+ D+A F ++ + ++ VYT I
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTI 198
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P V ++++ + G L+ A ++ +++K +P + T+ LIE G
Sbjct: 164 MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G D TY +I + K M+D+AF LL +L G P Y
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ RG++ + SE+ G PN ++ LI R G+ EA N L M E G
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + C+D + G G+ DLA + + +S
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS 376
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G P + ++L++ LL+ G ++++++MI G P++ T + LI T+C+ G+
Sbjct: 269 LSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGK 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE V + S+ + G D Y LI + G +D A L ++ DG P Y
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNT 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G R G+ D A F ++ G PPN Y TL + G A ++++ G
Sbjct: 389 IMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQG 448
Query: 181 LTP 183
+ P
Sbjct: 449 IDP 451
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P D L+ G G L+ A + + MI G PD+ +N+++ +C++G+
Sbjct: 339 MKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGK 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + ++G +VS+Y L A+ +G A ++ L+ G +P Y
Sbjct: 399 ADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNS 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G D+A +++ + PN Y ++ + R +A L MTE G
Sbjct: 459 LISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG 518
Query: 181 LTPISRCFDLVTDGL 195
P + L+ +G+
Sbjct: 519 CQPNETTYILLIEGI 533
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ + G ++ A +++++M+ +G +PD T+N++I +CK V+ E+
Sbjct: 206 PTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFEL 265
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G D+ TY IL+ + G E +L+ ++ G P ++ +I R
Sbjct: 266 LRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCR 325
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ ++A +K KG P+ Y LI R GR A +L M G P
Sbjct: 326 DGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVN 385
Query: 188 FDLVTDGLKNCGKHDLA-EKIEQLE 211
++ + GL GK D A E E+L+
Sbjct: 386 YNTIMAGLCRTGKADQALEVFEKLD 410
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +++G+ ++ A +++ + +G PD+ T+N L+ T+ G+
Sbjct: 234 MLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGK 293
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +G +V T+ ILI + + G ++EA LL ++ E G P Y P
Sbjct: 294 WSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDP 353
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ D A F + G P+ Y T++ R G+ +A ++ E+G
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413
Query: 181 LTPISRCFDLVTDGLKNCG 199
P ++ + L + G
Sbjct: 414 CPPNVSSYNTLFSALWSSG 432
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + ++ GL G + A ++ K+ + G P++ ++N+L + SG+
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+EM + G D TY LI + + GM+DEA LL ++ + P Y
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNI 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA---ANYLMEMT 177
I+ G + + +DA + + KG PN Y LI G G EA AN L M
Sbjct: 494 ILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMN 553
Query: 178 EMGLTPISR 186
+ +R
Sbjct: 554 AISEDSFNR 562
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 2/206 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +L+ L G +E A ++ M ++G PD ++ LI C+ G ++
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E + G D+ Y ++ + + G D+A + L E G P S Y +
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A ++ +G P+ Y +LI+ R G EA L++M P
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPN 487
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
++++ GL C + + IE L
Sbjct: 488 VVSYNIILLGL--CKVNRANDAIEVL 511
>gi|341605691|gb|AEK82948.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605825|gb|AEK83015.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMXLFKRME-EEEGCDQTVYTYTILISG 202
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 185
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+G P + ++++ G A ++ A+Q++ +M + G PD+ T+NS++ +CK+ +
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+Y + G DV T LI + K+ +D+A +LL + +G P Y
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + Q D + FFSE+ KG P Y+ +I + R + L M E G
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Query: 181 L 181
+
Sbjct: 448 V 448
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ L+ +G A + M+++ P TFN +I+ CK G+
Sbjct: 198 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G D+ TY I+I +A ID+A +LL + E G P Y
Sbjct: 258 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q D+A+ + ++ G+ + +TLI + R +A L EM G
Sbjct: 318 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 377
Query: 181 LTPISRCFDLVTDGL 195
P + ++ G
Sbjct: 378 SAPDVVAYTILIHGF 392
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + +++GL + G ++SA M + + P + T+ L++ +CKS
Sbjct: 59 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCA-PSVITYTILVDALCKSAR 117
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G +V TY LI K G +DEA L + ++E+ +P Y
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ + D E+ G PN Y TL+ + G++++A N M
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P F+L+ D G+ DLA ++ QL
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + L+ G G ++ A + N+M++ PD+ T+N LI+ CK
Sbjct: 128 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 187
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G + TY L+ ++ K+G +AF L ++ P +
Sbjct: 188 PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNL 247
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + GQ D A+ F + +G P+ Y +I+ R R +A L MTE G
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P ++ + GL C + E E EV
Sbjct: 308 CPPDVVTYNSIVSGL--CKASQVDEAYEVYEV 337
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +LV L + + A ++ MI+ G P++ T+N+LI CK G ++ V +
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + DV TY ILI K + +LL +V+ G P Y ++ +
Sbjct: 160 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G++ DAF + + P+ + +I M + G+ A MT+ G P
Sbjct: 220 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++++ G + D A ++
Sbjct: 280 YNIMISGACRANRIDDARQL 299
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 75 GSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G C+ D TY LI KA +A+RLL + + G P ++Y IIKG G+ D
Sbjct: 27 GLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDS 86
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + +++ + P+ YT L+ + R +A+ L +M E G P ++ + +
Sbjct: 87 ALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLIN 145
Query: 194 GLKNCGKHDLA 204
G G D A
Sbjct: 146 GFCKLGNMDEA 156
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 34/202 (16%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLG--------------------------- 75
PD T+++LI CK+ + + + + K G
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 76 ------SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
CA V TY IL+ A+ K+ I +A +L +++E G P Y +I G +
Sbjct: 91 YRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
G D+A F+++ P+ Y LI + R + A L EM + G P +
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210
Query: 189 DLVTDGLKNCGKHDLAEKIEQL 210
+ + D L GK+ A + Q+
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQM 232
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 106/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G NP + +++ G ++ A + +M PD+ T+NSLI+ +CK G+
Sbjct: 343 ISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGK 402
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D TY ++ A+ K +D+A LL + ++G P Y
Sbjct: 403 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTT 462
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +DA F ++ +KG+ + +YT +I G F E+ + L +M E G
Sbjct: 463 LVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENG 522
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++++ L + ++D AEK+
Sbjct: 523 CIPNAVTYEIIICSLFDKDENDKAEKL 549
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ NP V ++LV G L+ AK ++ M+KQG PD+ T+NSL++ C EV
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK 335
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ ++ + G ++ +Y I+I K +DEA L + + P Y +I
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ A E+ +G P ++ Y +++ + + +A L +M + G+ P
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 455
Query: 184 ISRCFDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 456 DICTYTTLVDGLCKNGR 472
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V + L+ G G ++ A + NKMI + +P++ TFN L++ CK
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERR 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K G DV TY L+ +++A + + + + G NP Y+
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A F E+ P+ Y +LI + G+ A + EM + G
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ ++ + D L C H + + I L
Sbjct: 418 VPHDKITYNSILDAL--CKNHQVDKAIALL 445
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V L++GL G + A Q +K++ G + ++ +LI +CK G+
Sbjct: 137 GYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAA 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ V +V Y +I ++ K +++EAF L +V G +P Y +I G
Sbjct: 197 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ DA F+++ + PN + L+ + R EA N L M + G+ P
Sbjct: 257 FCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKP 315
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
K++K G +P++ T +LI+ +C G++ ++ + V LG + +Y LI + K G
Sbjct: 132 KILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVG 191
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
A +LL + P +Y II + ++AF +SE+ KG P+ Y
Sbjct: 192 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYN 251
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
LI+ G+ +A + +M + P F+++ DG C + L E L + +
Sbjct: 252 ALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF--CKERRLKEAKNVLAMMM 309
Query: 215 RS 216
+
Sbjct: 310 KQ 311
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P V + ++ + + A + ++M+ +G PD+ T+N+LI C G+++
Sbjct: 206 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKD 265
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + +V T+ IL+ K + EA +L +++ G P Y ++
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + A F+ I +G PN Y+ +I + + EA N EM + P
Sbjct: 326 RYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP 385
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++ + DGL GK A K+
Sbjct: 386 DVVTYNSLIDGLCKLGKISYALKL 409
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + ++ L ++ A ++ KM +G PD+ T+ +L++ +CK+G
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G DV+ Y +I G+ DE+ LL + E+G P Y
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II F + + D A E+ +G
Sbjct: 533 IICSLFDKDENDKAEKLLREMITRG 557
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L+ + + + + +M G DL + LI + G+ + + K+G
Sbjct: 78 ILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T LI + G I +A + +V G + Y +I G + GQ A
Sbjct: 138 YEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAAL 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ K PN +Y T+I + EA + EM G++P ++ + G
Sbjct: 198 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGF 257
Query: 196 KNCGK 200
GK
Sbjct: 258 CIVGK 262
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Query: 34 NKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSK 92
N+++ Q + P + F ++ ++ KS V ++ + G +D+ ILI S+
Sbjct: 60 NRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQ 119
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G +F +L +++ G+ P +IKG +GQ A F ++ G N+
Sbjct: 120 LGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVS 179
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
Y TLI + G+ A L + + P ++ + D +
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 222
>gi|341605763|gb|AEK82984.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSI 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEA 176
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALXKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEE 185
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSIFYSSLIDGLGKAGRIDEAERL 144
>gi|399107196|gb|AFP20362.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 105 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 164 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 204
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P V + L+ G ++ A + +M ++ P+ T+N+L+ +C G
Sbjct: 338 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGR 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +++ + G D++TY+IL+ + K +DEA LL + +P +Y
Sbjct: 398 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ + A FS + KG PN YT +I R G EA MEM G
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517
Query: 181 LTPISRCFDLVTDGL 195
+P ++ +T GL
Sbjct: 518 CSPDGCTYNTITQGL 532
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + L+ GL + G L+ A + ++M+ G PDL T+ L++ +CK
Sbjct: 373 MCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSH 432
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ D+ Y I+I + +AG ++ A + NL G P Y
Sbjct: 433 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 492
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G RRG D+A F E+ G P+ Y T+ + + A L EM G
Sbjct: 493 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552
Query: 181 LT 182
+
Sbjct: 553 FS 554
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + L+ L N + ++N+MI PD+ F+++++ +CK G+
Sbjct: 233 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +V TY L+ +DEA ++ +V +G+ P Y
Sbjct: 293 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 352
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F E+ K PN Y TL+ GR +A EM G
Sbjct: 353 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + ++ D L C K L E + L+
Sbjct: 413 QIPDLATYRILLDYL--CKKSHLDEAMALLKT 442
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L+ + A ++ K++K G PD TF +LI +C G+
Sbjct: 93 MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K G + A RLL ++ + P +Y
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + Q +AF FS++ +G P+ YT+LI + L +M
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAE 205
+ P F V D L GK HD+ +
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVD 301
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ L + A + +KM+ QG PD+ T+ SLI ++C E + +
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ DV + ++ A+ K G I EA ++ ++ G P Y ++ G
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ + D+A F + G+ PN Y TLI + R +A EM + L P +
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384
Query: 188 FDLVTDGLKNCGK 200
++ + GL + G+
Sbjct: 385 YNTLMHGLCHVGR 397
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
N+M G PD+ T N LI + C F + + KLG D +T+ LI +
Sbjct: 91 NQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVE 150
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G I +A L ++ +G P Y +I G + G + A ++ P+ VY
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
T++I + + EA N +M G++P
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQGISP 240
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ L +L+ A ++ + DPD++ + +I+ +C++GE
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ ++ G +V TY I+I + + G++DEA +L + +G +P Y
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
I +G + + A E+ +G + T L+ M
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 566
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
LN L+ A N+M+ P FN L+ +I K+ + + + G DV
Sbjct: 43 LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 102
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T ILI + AF +L +++ G P + + +I+G G+ DA F +
Sbjct: 103 YTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDK 162
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + G A L M + P + + D L
Sbjct: 163 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 217
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P VR +++ GL G L+ A ++ +M G PD T+N++ + + ++ E
Sbjct: 478 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 537
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
+++ + G ADVST +L+ + + ++L V+
Sbjct: 538 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K NP V +L+ L G L+ AK ++ M K+G P++ T+++L++ C GE
Sbjct: 333 MTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGE 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++++++ + V +Y I+I + K +DEA LL ++ P Y
Sbjct: 393 VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNS 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A E+ +G P + YT+L+ + +A M+M E G
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + + DGL + A+K+ Q
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQKLFQ 541
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M NP V ++++ GL ++ A ++ +M+ + P+ T+NSLI+ +CKSG
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G ADV TY L+ + K +D+A L + E G P Y
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A F I +KG + Y +I + G EA +M + G
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG 582
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+++ L ++D AEK+
Sbjct: 583 CIPDAVTFEIIIRSLFEKDENDKAEKL 609
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ G AG L A ++N+M + +PD+ T+ LI+ +CK G+
Sbjct: 298 MNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGK 357
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K G +V TY L+ G + A ++ H +V+ NP Y
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNI 417
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A E+ K PN Y +LI + GR A + + E+ G
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + DGL C +L + I
Sbjct: 478 QPADVITYTSLLDGL--CKNQNLDKAI 502
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P L++GL G ++ + +K++ QG + ++ +L+ +CK GE
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 256
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + DV Y +I + K +++EA+ + G P Y+ +I G
Sbjct: 257 IKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICG 316
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ AF +E+ +K P+ YT LI + G+ EA N L MT+ G+ P
Sbjct: 317 FCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPN 376
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + DG G+ A++I
Sbjct: 377 VVTYSTLMDGYCLVGEVHNAKQI 399
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +L+ + G + + ++ K++K G P+ +L++ +C GE
Sbjct: 158 MEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGE 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + V G + +Y L+ + K G A +LL + + P +Y
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + ++A+ F++E+ +G P+ Y+TLI G+ + A + L EMT
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++ D L GK
Sbjct: 338 INPDVYTYTILIDALCKEGK 357
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL L+ A + KM ++G P+ T+ +LI+ +CK ++ +++ + G
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG 547
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
C DV TY ++I + K GM+DEA + + ++G P + II+ F + + D A
Sbjct: 548 CCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAE 607
Query: 136 CFFSEIKIKG-------HPPNRPVYTTLIT 158
E+ KG H PV +I
Sbjct: 608 KLLHEMIAKGLLHFRNFHGERSPVTNKVIV 637
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF L+ GL G A +++ + + + PD+ +N++I+ +CK V
Sbjct: 231 QGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNE 290
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ Y + G DV TY LI AG + AF LL+ + NP Y +I
Sbjct: 291 AYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILID 350
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ +A + +G PN Y+TL+ G A M + + P
Sbjct: 351 ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410
Query: 184 ISRCFDLVTDGL 195
++++ +GL
Sbjct: 411 SVCSYNIMINGL 422
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 57/110 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ GL L++A+++ ++ +G D+ T+N +I +CK G
Sbjct: 508 MKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGM 567
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
++ + M + G D T++I+I ++ + D+A +LLH ++ G
Sbjct: 568 LDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 69/170 (40%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ A N M+ + P + F ++ ++ K + + + G D+ T I
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI G + +F +L +++ G+ P + ++KG +G+ + F ++ +G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
N+ Y TL+ + G A L + + P ++ + DGL
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL AG E A ++ +M+ G P+ +N LI KSGE++F E++ + K G
Sbjct: 907 LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG 966
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ +Y IL+ + G IDEA + L G +P Y II G + + D+A
Sbjct: 967 IRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEAL 1026
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FSE+K +G P+ Y LI G G+ A E+ +GL P ++ + G
Sbjct: 1027 SLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGH 1086
Query: 196 KNCGKHDLA 204
G D A
Sbjct: 1087 SLSGNKDQA 1095
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + + L+ GLL + + E A ++ M G+ P+ T+N L++ KS +
Sbjct: 791 GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + G + T+ I+I A+ K+ +++A L + L+ +P P Y P+I G
Sbjct: 851 YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ + A F E+ G PN +Y LI G+ G A +M + G+ P
Sbjct: 911 LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970
Query: 185 SRCFDLVTDGLKNCGKHDLA-EKIEQLEVS 213
+ + ++ + L G+ D A + E+L+++
Sbjct: 971 LKSYTILVECLCITGRIDEAVQYFEELKLT 1000
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V +L+ L AG L+ AK++ KM PD T+ +L++ K G+
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G DV TY ILI A+ K+G +D AF +L + G P Y
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A ++ G P Y I G+ G +A + M + G
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 181 LTP-ISRC 187
+ P I+ C
Sbjct: 476 IMPSIAAC 483
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 36/209 (17%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++L++ AG ++ A Q++++MI +G +PD+ NSLI T+ K+G V+
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPSL--- 117
+M+ + L V TY IL+ + K G I +A L ++ E G P F SL
Sbjct: 570 WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC 629
Query: 118 ----------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
Y II G R G+ D AF FF ++K K P+
Sbjct: 630 LSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPD 688
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTE 178
TLI R GR +A +ME
Sbjct: 689 YVTLCTLIPGVVRHGRVEDAIKVVMEFVH 717
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++++ L+ + L A + +++ P T+ LI+ + K+G
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGR 916
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++++ + G + Y ILI K+G ID A L +V++G P Y
Sbjct: 917 SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ G+ D+A +F E+K+ G P+ Y +I G+ R EA + EM G
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEV 212
++P ++ + L GK D+A K+ E+L++
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQL 1069
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L + +G A M K+G P + N+ + T+ ++G
Sbjct: 436 MESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGR 495
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + K G D TY +L+ SKAG ID+A +LL ++ G P +
Sbjct: 496 ISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS 555
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ G+ D A+ F +K P Y L+T G+ G+ ++A MTE G
Sbjct: 556 LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + D L DLA K+
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKM 642
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + ++ L A ++ A + +M +G PD+ T+ LI+ +C +G+
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGK 320
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + D TY L+ K G ++ R + + DG+ P Y
Sbjct: 321 LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTI 380
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + G D AF + KG PN Y T+I + R EA L M +G
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P + + L D G D A+ I+ E
Sbjct: 441 VKPTAFSYVLFIDYYGKSG--DPAKAIDTFET 470
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
G LE+ K+ N+M G PD+ T+ LIE +CKSG+V+ +M + G ++ T
Sbjct: 353 VGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHT 412
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y +I + KA +DEA LL N+ G P Y I + G A F +K
Sbjct: 413 YNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMK 472
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ + GR EA + ++ + GL+P S ++++ G+ D
Sbjct: 473 KRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQID 532
Query: 203 LAEKI 207
A ++
Sbjct: 533 KATQL 537
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++L+ G +G ++ A ++ KM+K+G PDL+++ L+E +C +G
Sbjct: 927 MLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGR 986
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V+ + + G D +Y +I + K+ +DEA L + G +P Y
Sbjct: 987 IDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNA 1046
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ D A + E+++ G P+ Y LI G +A + +M +G
Sbjct: 1047 LILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG 1106
Query: 181 LTPISRCF 188
+P + F
Sbjct: 1107 CSPNTETF 1114
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ GF + L+ LL G+ A ++ +MI +G P ++T+++L+ + + G+
Sbjct: 192 MTEVGFILNAYSYNGLIHLLL-PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGD 250
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G ++ TY I I A+ +A ID+A+ + + ++G P Y
Sbjct: 251 TRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTV 310
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ D A + +++ H P+R Y TL+ G+ G + EM G
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + ++ + L C D+ + L+V
Sbjct: 371 YAPDVVTYTILIEAL--CKSGDVDRAFDMLDV 400
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +LL+ + + + ++M +G +P+ T N +I + KS
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++YY + TY LI + KAG ++A ++ +++ G P +Y
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A F ++ +G P+ YT L+ GR EA Y E+ G
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG 1001
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P + ++ + +GL + D A
Sbjct: 1002 LDPDTVSYNFIINGLGKSRRLDEA 1025
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ +LV+ L G ++ A Q ++ G DPD ++N +I + KS
Sbjct: 962 MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G D+ TY LI + AG +D A ++ L G P Y
Sbjct: 1022 LDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNA 1081
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+I+G G D AF F ++ + G PN + L R G
Sbjct: 1082 LIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + + L G + A+ + N + K G PD T+N L++ K+G+
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ 530
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G DV LI + KAG +D A+++ L P Y
Sbjct: 531 IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNI 590
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ A F + G PPN + +L+ + A MT M
Sbjct: 591 LLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + GL G+ D A
Sbjct: 651 CNPDVLTYNTIIYGLIREGRIDYA 674
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L+ L G ++ +M G P++ T+ I + ++
Sbjct: 226 MISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARR 285
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G DV TY +LI A+ AG +D+A L + H+P Y
Sbjct: 286 IDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYIT 345
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G + F++E+++ G+ P+ YT LI + G A + L MT G
Sbjct: 346 LMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
+ P ++ + GL + D A E +E +E
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENME 437
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + ++ GL + L+ A + ++M +G PDL T+N+LI + +G+V+
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V+MY + +G V TY LI S +G D+AF + ++ G +P +A +
Sbjct: 1061 VKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNK 1120
Query: 125 AFRRGQFDDAF 135
R G + F
Sbjct: 1121 YPRAGLVHNPF 1131
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 78/193 (40%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK-L 74
L++ +L +E A ++ D LI+ +CK + ++ K L
Sbjct: 731 LMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNL 790
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + +Y L+ + + ++A L ++ G +P Y ++ + + +
Sbjct: 791 GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ +SE++ +G PN + +I+ + +A + E+ +P + + DG
Sbjct: 851 YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910
Query: 195 LKNCGKHDLAEKI 207
L G+ + A KI
Sbjct: 911 LLKAGRSEQAMKI 923
>gi|399107208|gb|AFP20368.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 92/177 (51%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G ++A +F + G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGXVEEALDYFQTCRFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGX 104
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 105 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 163
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 164 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 204
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGXVEEALDYFQTCRFNGLAINSXFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V +L+ GL ++ A ++ N+M+ +G P+ TF +LI+ CKSG
Sbjct: 197 MHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + + G D+ TY LI + + G + +A L+ + G P Y
Sbjct: 257 VDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + ++ +G G A K+
Sbjct: 377 LKPENGTYTMIINGFCKQGDVKTASKL 403
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G +G ++ A ++ +M++QG PDL T+N+LI +C+ G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF L ++E+ Y
Sbjct: 292 LKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G A+ L EM G
Sbjct: 352 LISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 HVP 414
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G + G L+ ++ M G PD+ T LI +CK +++
Sbjct: 166 GLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEA 225
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ + G + T+ LI K+G +D A + ++ G++P Y +I G
Sbjct: 226 NELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYG 285
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R+G A E+ +KG P++ YTTLI + G A M E +
Sbjct: 286 LCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLD 345
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + GL G+ AEK+ E L V L+
Sbjct: 346 DVAYTALISGLCQEGRAVDAEKMLREMLSVGLK 378
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + +FN+LI + G+++ + ++
Sbjct: 140 NILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV T +LI + K +DEA L + +++ G P + +I G + G+ D
Sbjct: 200 SGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ +G+ P+ Y TLI R G +A + ++EM+ GL P + + D
Sbjct: 260 ALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G +C + DL E
Sbjct: 320 G--SCKEGDLETAFE 332
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK GE+ ++ ++ K G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ LI + G +D+ FRL + G +P +I G + + D+A
Sbjct: 167 LRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ KG PN +TTLI + GR A +M G +P ++ + GL
Sbjct: 227 ELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CRKGDLKQ 294
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 73/192 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + K +T ++E + K + Y + + G
Sbjct: 72 LITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ + IL+ K G I A + + + G P + +I G R G D F
Sbjct: 132 YPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P+ T LI + + EA EM + GL P F + DG
Sbjct: 192 RLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKSGRVDLALEI 263
>gi|341605695|gb|AEK82950.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRMEE 185
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALTKHGKVDEAMMLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ GL G L AK++V +M ++G PD T+ LI+ CK G+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + K G D + LI + G + EA R L ++E G P + Y
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G F E++ GH P Y L+ + G+ A L M +G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P ++++ +G +C KH E ++L+
Sbjct: 536 VVPDDITYNILLEG--HC-KHGNREDFDKLQ 563
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ F P V +L+ GL G L+ A ++ +M +G P+ TF +LI C +G
Sbjct: 287 MENRVF-PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+Y + + G DV TY LI + K G + EA +L+ + + G P Y
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A E+ +G + +T LI+ R G+ +EA L EM E G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + +V G C K D+ + L+
Sbjct: 466 IKPDDATYTMVIHGF--CKKGDVKTGFKLLK 494
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G+ P V ++L+ L + A+ + ++ K+G P + +FN+LI CKSG ++
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + DV TY +LI + K G +D+A +L + + G P + +I
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G G+ D + ++ KG P+ Y TLI + G EA ++EMT+ GL
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIE 208
P + ++ DG C + DL +E
Sbjct: 398 PDKFTYTMLIDGC--CKEGDLESALE 421
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
P L L+ A +++ G PD+ FN L+ +CK ++ ++
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ K G V ++ LI K+G +D+ FRL ++E+ P Y+ +I G +
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
GQ DDA F E+ +G PN +TTLI GR +M G+ P +
Sbjct: 309 GQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITY 368
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ + +GL G A+K+
Sbjct: 369 NTLINGLCKVGDLREAKKL 387
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V ++++ GL ++ A ++ +M+ + PD T+NSLI+ +CKSG
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G ADV TY L+ A+ K +D+A L + E G P Y
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + +KG + YT +I+ + G F EA +M + G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+++ L ++D AEK+
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKL 450
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V + L+ AG L A ++++MI + +PD+ TF+ LI+ +CK G+
Sbjct: 176 MDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++++++ ++G +V +Y I+I + K +DEA LL ++ P Y
Sbjct: 236 NA--KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 293
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A +E+ +G P + YT+L+ + +A M+M E G
Sbjct: 294 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 353
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + + DGL G+ A+++ Q
Sbjct: 354 IQPTMYTYTALIDGLCKGGRLKNAQELFQ 382
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K NP V +L+ L G ++AKQ+ + M++ G +P++ ++N +I +CK V+
Sbjct: 214 KNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + D TY LI + K+G I A L++ + G Y ++
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ D A F ++K +G P YT LI +GGR A + G
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIE 208
+ ++ GL G D A I+
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIK 416
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V L+ L L+ A + KM ++G P + T+ +LI+ +CK G
Sbjct: 314 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 373
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G C DV TY ++I + K GM DEA + + ++G P +
Sbjct: 374 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEI 433
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+ F + + D A E+ KG
Sbjct: 434 IIRSLFEKDENDKAEKLLHEMIAKG 458
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + +L+ + G + + ++ K++K G P+ T+ +L++ +C GE
Sbjct: 36 MDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGE 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + V + +Y L+ + K G A +LL + + P +Y+
Sbjct: 96 VKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSA 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + ++A+ +SE+ + PN Y TLI G+ + A + L EM
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN 215
Query: 181 LTPISRCFDLVTDGLKNCGKH 201
+ P F ++ D L GK+
Sbjct: 216 INPDVYTFSILIDALCKEGKN 236
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G VR ++++ G ++ A ++ +M + P++ T+NSLI+ +CKSG
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +E+ + G D+ TY ++ A+ K ++D+A LL L + G P Y
Sbjct: 401 ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTI 460
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +DA F ++ +KG+ YT +I G F EA + L +M +
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++++ L + ++D AEK+
Sbjct: 521 CIPDAITYEIIICSLFDKDENDKAEKL 547
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ + NP V ++LV G ++ AK + M+KQG PD+ T+NSL++ C E
Sbjct: 271 MTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNE 330
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ G A V +Y I+I K M+D+A +L + P Y
Sbjct: 331 VNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNS 390
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A + +G P+ Y++++ + +A L+++ + G
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ DGL G+ + A I
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNI 477
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 3/200 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G L+ A + NKM + +PD+ TFN L++ CK G V+ + K G
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY L+ ++ A +L+ + G Y +I G + D A
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ K PN Y +LI + GR A + M + G P + + D L
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430
Query: 196 KNCGKHDLAEKIEQLEVSLR 215
C H L +K L + L+
Sbjct: 431 --CKNH-LVDKAIALLIKLK 447
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++L+ G + A ++ K++K G +PD T N+ I+ C G+
Sbjct: 96 MEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQ 155
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + LG D +Y LI + K G A LL + +Y+
Sbjct: 156 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + +DAF +SE+ + N Y+ LI+ G+ +A +MT
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275
Query: 181 LTPISRCFDLVTDGL 195
+ P F+++ D
Sbjct: 276 INPDVYTFNILVDAF 290
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + ++ L ++ A ++ K+ QG P++ T+ LI+ +CK G
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G V+TY ++I G+ DEA LL + ++ P Y
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II F + + D A E+ +G
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRG 555
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 87/203 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+ L+ GL G +A +++ ++ + D+ ++++I+++CK V
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + +++ TY LI G + +A L + + + NP + ++
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 289
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +A + + +G P+ Y +L+ A + L M+ G+T
Sbjct: 290 FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTAT 349
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
R +++V +G D A K+
Sbjct: 350 VRSYNIVINGFCKIKMVDQAMKL 372
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 29 AKQMVNKMIKQG-SDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
A + N +++Q + PD+E F ++ ++ KS + ++ + G + + ILI
Sbjct: 54 AVSLFNCLLRQNPTPPDME-FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+ G+I AF +L +++ G+ P IKG +GQ A F ++ G
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172
Query: 148 PNRPVYTTLIT-MCGRG 163
++ Y TLI +C G
Sbjct: 173 LDQVSYGTLINGLCKVG 189
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V L+ G + G + A ++V +M G P+ T+++LI +CK G
Sbjct: 339 MSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGR 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K+G AD TY ++I + +EAF LL+ + + G +P Y+
Sbjct: 399 MGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSI 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G+ + A ++ G PN VY LI+ R G F A L +MT
Sbjct: 459 IINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTREN 518
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
LTP C++ + GL N GK D E IE
Sbjct: 519 LTPDLYCYNSLIIGLSNVGKMD--EAIE 544
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 101/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P +R + L++ LL A L+ ++ M G PD+ T+++LIE CK +
Sbjct: 199 MKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRD 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G +V TY LI + +AG I+EAF + + G P Y
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGA 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G +RG+ D A C E+ G PN VY+TLI R G EA + EM+ G
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P +D + GL G+ A +I
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRI 405
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P D L++GL G + A +++ +M K G D T+N +IE +
Sbjct: 374 MSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHN 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + K G +V TY I+I + + G + A LL ++ DG P +YAP
Sbjct: 434 KEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAP 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G F A ++ + P+ Y +LI G+ EA Y EM E G
Sbjct: 494 LISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + G G + AE++
Sbjct: 554 FQPNDFTYGGLIHGYSMAGNLEKAEQL 580
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P R +++ L ++G++++A +++ + K G PD + SLI CK+ +
Sbjct: 619 MLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAAD 678
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + K G +S Y LI K+ I A + ++++ G P Y
Sbjct: 679 MEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTT 738
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DA ++E+ +G P+ VY+ L C G +A EM G
Sbjct: 739 LIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG 798
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
IS F+ + G C + L E ++ L V
Sbjct: 799 YAIISS-FNTLVHGF--CKRGKLQETVKFLHV 827
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G NP +++G + LE + M+++G PD + +I + SG
Sbjct: 584 MLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGH 643
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V + + K G D Y LI KA +++A LL + + G P S Y
Sbjct: 644 MQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNA 703
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + A F+ I KG PPN YTTLI + G +A + EM G
Sbjct: 704 LIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG 763
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P + + ++ G N G
Sbjct: 764 VAPDAFVYSVLAAGCSNSG 782
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G A + + KM ++ PDL +NSLI + G+++ +E Y + + G
Sbjct: 494 LISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY LI S AG +++A +LLH ++ G NP +YA I++G F+ +
Sbjct: 554 FQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVS 613
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ KG P+ +Y +I G A + L + + GL P S + + G
Sbjct: 614 STLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGF 673
Query: 196 KNCGKHDLAEKIEQLE 211
C D+ + + L+
Sbjct: 674 --CKAADMEKAVGLLD 687
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ + P + + L+ GL N G ++ A + ++M+++G P+ T+ LI +G
Sbjct: 514 MTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGN 573
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G + Y ++ K+ +++ L +++E G P LY
Sbjct: 574 LEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGI 633
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G A S I+ G P+ +Y +LI+ + +A L EM + G
Sbjct: 634 VIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P C++ + DG C D++
Sbjct: 694 IEPGISCYNALIDGF--CKSDDISH 716
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G+ +L+++G L E A ++N+M K G P++ T++ +I +C+ GE
Sbjct: 409 MTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGE 468
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + G + Y LI + G A L + + P Y
Sbjct: 469 SERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNS 528
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A ++ E+ KG PN Y LI G +A L +M G
Sbjct: 529 LIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSG 588
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
L P + + +G + ++ +E++ +L+S+
Sbjct: 589 LNPNDFIYAQILEG------YFKSDNLEKVSSTLKSM 619
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G + V + L+ GL AG +E A +M G PD T+ ++I +CK G
Sbjct: 269 MRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGR 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G +V Y LI + G DEAF+++ + G P Y
Sbjct: 329 PDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDN 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ A ++ G+ + Y +I R EA L EM + G
Sbjct: 389 LIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGG 448
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK-IEQL 210
++P + ++ +GL G+ + A +EQ+
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQM 479
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V +L+ G + ++ A + +M ++ PD T++SL++ +CKSG
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G ADV TY LI + K G +D+A L + + + G P +
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA F ++ KG+ + +Y +I + G EA L +M E G
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + FD++ + L ++D AEK+
Sbjct: 758 CIPNAVTFDIIINALFKKDENDKAEKL 784
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP VR +LV L G ++ AK ++ M+K PD+ T+N+L+ E
Sbjct: 508 MVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYE 567
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ ++ +G DV TY ILI K+ M+DEA L + + P Y+
Sbjct: 568 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSS 627
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + E++ +G P + Y +LI + G +A +M + G
Sbjct: 628 LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + F ++ DGL G+ A+++ Q
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQ 716
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++L+ + G + ++ K++K+G P T N+LI+ +C G+V+
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G + +Y LI V K G A +LL + P +Y+ II
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +A+ FSE+ +KG + Y+TLI G+ EA L EM + P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
R + ++ D L GK A+ + L V L++
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSV--LAVMLKA 546
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P LV GL +G + ++++M +G D+ T+NSLI+ +CK+G
Sbjct: 613 MHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH 672
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + T+ IL+ + K G + +A + +L+ G++ +Y
Sbjct: 673 LDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNV 732
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G ++A S+++ G PN + +I + +A L +M G
Sbjct: 733 MIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792
Query: 181 L 181
L
Sbjct: 793 L 793
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 90/191 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P + L++GL G ++ A +K++ QG + ++ +LI +CK G+
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + +V Y +I A+ K ++ EA+ L + G + Y+ +I
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A +E+ +K P+ YT L+ G+ G+ EA + L M + + P
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550
Query: 184 ISRCFDLVTDG 194
++ + +G
Sbjct: 551 DVFTYNTLMNG 561
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
++ K++K+G PD T N+LI+ +C G+V+ + + + G + +Y LI V
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+ G A + L + P +Y II + +A+ FSE+ +KG N
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
Y+TLI G+ EA L M + P ++++ D L C + + E L
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDAL--CKEGKVKEAKSVLA 227
Query: 212 VSLRS 216
V L++
Sbjct: 228 VMLKA 232
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ L + A + ++M +G D+ T+++LI C G+++ + +
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGL 504
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ DV TY IL+ A+ K G + EA +L +++ P Y ++ G
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLL 564
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A F+ + + G P+ YT LI + EA N EM + + P +
Sbjct: 565 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624
Query: 188 FDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 625 YSSLVDGLCKSGR 637
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 84/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P + L++GL G ++ A +K++ QG + ++ +LI +C+ G+
Sbjct: 57 RGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRA 116
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + +V Y +I A+ K ++ EA+ L + G + Y+ +I
Sbjct: 117 AIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIY 176
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A + + +K PN Y L+ + G+ EA + L M + +
Sbjct: 177 GFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKS 236
Query: 184 ISRCFDLVTDG 194
+ + DG
Sbjct: 237 NVITYSTLMDG 247
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG + V L+ G G L+ A ++N M+ + +P++ T+N L++ +CK G+
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + K ++V TY L+ + +A + + + G P Y
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNI 278
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+I G + + D A F E+ + PP
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFPP 306
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V +QGL G ++ A +M +M ++G +P+ +LI+ CK G+
Sbjct: 303 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 362
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E+ + + G AD+ Y L+ + + A ++ + +DG P Y
Sbjct: 363 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 422
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A E+ +G + YT LI+ + GR V+A L EM E G
Sbjct: 423 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 482
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + + +V D C D+ + L+
Sbjct: 483 LQPDNTTYTMVIDAF--CKNGDVKTGFKHLK 511
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G + + LV G +++A +V +M K G PD T+ +LI+ CK GE
Sbjct: 373 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 432
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +EM + G D TY LI +SKAG +A R+L ++E G P + Y
Sbjct: 433 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 492
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G F E++ KG P Y ++ G+ A L M +G
Sbjct: 493 VIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 552
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P ++++ DG +C KH E+L+
Sbjct: 553 VCPNDITYNILLDG--HC-KHGKVRDTEELK 580
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 37/250 (14%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P R ++L++ ++ +G L SA+ + ++M+++G P + TFN+L+ +CK+ ++
Sbjct: 235 DAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLN 294
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + K G DV TY I + K G I +A + + E G NP + +I
Sbjct: 295 NANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLI 354
Query: 123 KGAFRRGQFD-------------------------DAFC----------FFSEIKIKGHP 147
+ G + FC E++ G
Sbjct: 355 DAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLK 414
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P++ YTTLI C + G A EM++ G+ + + GL G+ AE+I
Sbjct: 415 PDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERI 474
Query: 208 --EQLEVSLR 215
E +E L+
Sbjct: 475 LCEMMEAGLQ 484
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G NP L+ G + + ++ +M +G DL +N+L+ C+ +
Sbjct: 338 MCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRD 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G D TY LI K G +D A + + ++G Y
Sbjct: 398 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT +I + G +L EM G
Sbjct: 458 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 517
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P +++V +G + G+ A+ +
Sbjct: 518 KNPGIVTYNVVMNGFCSLGQMKNADML 544
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+P V ++L+ L G L A ++ KM K G P+ ++N L+ CK +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + G D+ TY ++ A+ K G +++A +L+ L G +P Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A E++ K P+ Y++L+ R G+ EA + E MG
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + F+ + GL + D A
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQTDRA 538
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++LV G+ G L+ A + +N M G P++ T N ++ ++C +G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V T+ ILI + + G++ A +L + + G P Y P
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A + + +G P+ Y T++T + G+ +A L +++ G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P+ ++ V DGL GK A K+
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKL 471
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A + + +M+ +G PD+ T+N+++ +CK G+
Sbjct: 370 MPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE VE+ + G + TY +I ++KAG +A +LL + P Y+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ D+A FF E + G PN + +++ + + A ++L+ M G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRG 549
Query: 181 LTPISRCFDLVTDGL 195
P + ++ +GL
Sbjct: 550 CKPTETSYTILIEGL 564
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V + +++ L ++G L+ A +++++M+++ PD+ T+ LIE C+ V ++
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMK 260
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + G DV TY +L+ + K G +DEA + L+++ G P + I++
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G++ DA +++ KG P+ + LI R G A + L +M + G P S
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSL 380
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLE 211
++ + G C + + IE LE
Sbjct: 381 SYNPLLHGF--CKEKKMDRAIEYLE 403
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE--------- 66
L++G G A +++ + G+ PD+ T+N +I CK+GE+ +
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 67 -------MYYSVCKLGSCA----------------DVSTYKILIPAVSKAGMIDEAFRLL 103
+ S+C G DV TY ILI A + + +A +LL
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLL 262
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ + G P Y ++ G + G+ D+A F +++ G PN + ++
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
GR+++A L +M G +P F+++ + L C K L I+ LE
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFL--CRKGLLGRAIDILE 368
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + ++ L G +E A +++N++ +G P L T+N++I+ + K+G+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + D TY L+ +S+ G +DEA + H G P +
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNS 524
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q D A F + +G P YT LI G EA L E+ G
Sbjct: 525 IMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 181 L 181
L
Sbjct: 585 L 585
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 3/190 (1%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
++ L+ G LE + + M+ G+ PD+ +LI C+ G+ ++ + G+
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
DV TY ++I KAG I+ A +L + +P Y I++ G+ A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ + P+ YT LI R +A L EM + G TP ++++ +G+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 197 NCGKHDLAEK 206
G+ D A K
Sbjct: 286 KEGRLDEAIK 295
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G + A +V++M++ G PD+ T+NS++ IC+SG+
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + ADV TY +I ++ + G ID A L + G Y +++G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+++D ++ + PN + L+ + + G+ EA EM G++P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++ + DG C ++ L+E L++ +R+
Sbjct: 333 IITYNTLMDGY--CMQNRLSEANNMLDLMVRN 362
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G +LVQG +G ++ A+++ +M+ G PD+ T+ L++ +C +G+
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ + K + Y +I + K G +++A+ L +L G P Y
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A +++ G+ PN Y TLI R G +A + EM G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 LTPISRCFDLVTDGL 195
+ + +V D L
Sbjct: 574 FSADASSIKMVIDML 588
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
M +G +P + + L+ G L A M++ M++ PD+ TF SLI
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 53 ---------------------------ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ C+SG+++ E++ + G DV TY I
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G +++A + +L + + +Y II+G + G+ +DA+ F + KG
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
PN YT +I+ + G EA L +M E G P
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + LV+GL AG ++ M+ + P++ TFN L++ K G+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + G ++ TY L+ + EA +L +V + +P +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + DD F I +G N Y+ L+ + G+ A EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
+ P + ++ DGL + GK + A +I E L+ S
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ K++K G +PD TFN+LI+ + G+V V + + + G DV TY ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ ++G A LL + E Y+ II R G D A F E++ KG
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y +L+ + G++ + A L +M + P F+++ D GK A ++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + +V G+ +G A ++ KM ++ D+ T++++I+++C+ G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + V TY L+ + KAG ++ LL ++V P +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A + E+ +G PN Y TL+ R EA N L M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 181 LTPISRCFDLVT 192
+P D+VT
Sbjct: 364 CSP-----DIVT 370
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G ++ T N +I C+ + F + V KLG D +T+ LI + G + E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A L+ +VE+G P Y I+ G R G A +++ + + Y+T+I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
R G A + EM G+ ++ + GL GK +
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 9/202 (4%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE----VE 62
N V R+ L G+++ + A + +MI+ P L F+ I ++ + ++
Sbjct: 51 NGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD 109
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
FC ++ + G ++ T I+I + A+ +L +++ G+ P + + +I
Sbjct: 110 FCKQLELN----GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
KG F G+ +A + G P+ Y +++ R G A + L +M E +
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225
Query: 183 PISRCFDLVTDGLKNCGKHDLA 204
+ + D L G D A
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAA 247
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG+ P + L+ G L +AK + +KM++ P++ T+ +LI+ + KSG+
Sbjct: 105 MAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGK 164
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + K G +V+TY LI K +DEA +LL +V G P Y
Sbjct: 165 VQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNI 224
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R + +DAF F + + P Y TL+ + A EM G
Sbjct: 225 LLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 284
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQLEVSLRS 216
P + +D + GL GK H+ E +E+++++ R+
Sbjct: 285 CPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 321
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL +G +++A ++++ M+K+G P++ T++ LI+ CK V+ ++
Sbjct: 147 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 206
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G V TY IL+ ++ +A +++AF+L + + +P Y +++
Sbjct: 207 LEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 266
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
Q D A ++E+ KG PP+ Y TL R G+ EA + +M P R
Sbjct: 267 HKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPFGR 325
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + ++ GL +E A+ + KM+KQ +P++ T+N+LI +CK+
Sbjct: 35 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 94
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G +Y LI K + A + +V P Y
Sbjct: 95 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 154
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A + KG PN Y+ LI + R EA L +M G
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 214
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++++ + L K + A K+
Sbjct: 215 IAPTVVTYNILLNSLCRADKLEDAFKL 241
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L ++ A V +M +G PD +N ++ +C+ +VE ++ + K
Sbjct: 15 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 74
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY LI + KA I+ A+ L + G+ P Y +I G ++ A
Sbjct: 75 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 134
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ PN YTTLI + G+ AA L M + G+TP + + DG
Sbjct: 135 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 194
Query: 196 KNCGKHDLAEK-IEQL 210
+ D A K +EQ+
Sbjct: 195 CKVRRVDEAHKLLEQM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ G ++ A +++ +M+ QG P + T+N L+ ++C++ +
Sbjct: 175 MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADK 234
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + + V TY L+ A+ +D A RL ++ G P Y
Sbjct: 235 LEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDT 294
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ G R G+ +A ++K+ P
Sbjct: 295 LAWGLTRAGKVHEAQELMEKMKLTKRNP 322
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
PD T+ ++E +CK+ ++ + + G D Y ++ + + ++EA L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+V+ NP Y +I G + + + A+ F E+ KG+ P Y TLI +
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
V A + +M P + + DGL GK A ++
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEV 171
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++L+ L A LE A ++ M ++ P + T+N+L+ +C +
Sbjct: 210 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 269
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
++ +Y + G D TY L +++AG + EA L+ + NPF
Sbjct: 270 LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPF 323
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P ++ GL G + A ++ NKM +G +PD T+ +LI+ CKSGE
Sbjct: 106 MEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGE 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G +V TY L + K G +D A LLH + G Y
Sbjct: 166 MEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNS 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G A E+++ G P+ +TTL+ + G V+A L EM + G
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG 285
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F+++ +G G + E++
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERL 312
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ G G L+ +++ +M +G P+L T+NS+I +CKSG+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + G D Y LI K G I A++L + + P Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ +A F+++ +G P+ YTTLI + G +A + +M + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + DGL G+ D A ++
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANEL 207
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + ++ L +G ++ A++++ +MI QG PD + +LI+ CK G
Sbjct: 36 MQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + K D Y +I + + G + EA ++ + + G P Y
Sbjct: 96 IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + AF +++ G PN YT L + G+ A L EM G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
L ++ + +GL G A K+ E++EV+
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVA 249
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++L+ G +G LE ++++ M+++G P+ T+NSL++ C
Sbjct: 281 MLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNN 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y +C G D +TY ILI KA + EA+ L + E G N S Y
Sbjct: 341 MRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
IIKG F++ + +A F E++ +G + +Y +
Sbjct: 401 IIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFV 437
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G G +++A ++ ++M KQ PD + ++I +C+ G+
Sbjct: 71 MINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D TY LI K+G +++AF L + +V+ G P Y
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + GQ D A E+ KG N Y +L+ + G +A + EM G
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 181 LTPISRCFDLVTDG 194
+ P + F + D
Sbjct: 251 MYPDTITFTTLMDA 264
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G +G +E A + N+M++ G P++ T+ +L + +CK G+
Sbjct: 141 MFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQ 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + +C G ++ TY L+ + K+G I +A +L+ + G P +
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ A E+ +G P + L+ G + L M E G
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320
Query: 181 LTPISRCFD 189
+ P + ++
Sbjct: 321 IMPNTTTYN 329
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L GL G +++A +++++M +G ++ T+NSL+ +CKSG
Sbjct: 176 MVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGN 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V++ + G D T+ L+ A K G + +A LL +++ G P +
Sbjct: 236 IRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + + KG PN Y +L+ C R Y M
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIY-KGMCAR 354
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P S ++++ G +C ++ E
Sbjct: 355 GVMPDSNTYNILIKG--HCKARNMKE 378
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G + A +V++M++ G PD+ T+NS++ IC+SG+
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + ADV TY +I ++ + G ID A L + G Y +++G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+++D ++ + PN + L+ + + G+ EA EM G++P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++ + DG C ++ L+E L++ +R+
Sbjct: 333 IITYNTLMDGY--CMQNRLSEANNMLDLMVRN 362
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G +LVQG +G ++ A+++ +M+ G PD+ T+ L++ +C +G+
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ + K + Y +I + K G +++A+ L +L G P Y
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A +++ G+ PN Y TLI R G +A + EM G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 LTPISRCFDLVTDGL 195
+ + +V D L
Sbjct: 574 FSADASSIKMVIDML 588
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
M +G +P + + L+ G L A M++ M++ PD+ TF SLI
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 53 ---------------------------ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ C+SG+++ E++ + G DV TY I
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G +++A + +L + + +Y II+G + G+ +DA+ F + KG
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
PN YT +I+ + G EA L +M E G P
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + LV+GL AG ++ M+ + P++ TFN L++ K G+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + G ++ TY L+ + EA +L +V + +P +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + DD F I +G N Y+ L+ + G+ A EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
+ P + ++ DGL + GK + A +I E L+ S
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ K++K G +PD TFN+LI+ + G+V V + + + G DV TY ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ ++G A LL + E Y+ II R G D A F E++ KG
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y +L+ + G++ + A L +M + P F+++ D GK A ++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + +V G+ +G A ++ KM ++ D+ T++++I+++C+ G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + V TY L+ + KAG ++ LL ++V P +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A + E+ +G PN Y TL+ R EA N L M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 181 LTPISRCFDLVT 192
+P D+VT
Sbjct: 364 CSP-----DIVT 370
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G ++ T N +I C+ + F + V KLG D +T+ LI + G + E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A L+ +VE+G P Y I+ G R G A +++ + + Y+T+I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
R G A + EM G+ ++ + GL GK +
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 9/202 (4%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE----VE 62
N V R+ L G+++ + A + +MI+ P L F+ I ++ + ++
Sbjct: 51 NGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD 109
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
FC ++ + G ++ T I+I + A+ +L +++ G+ P + + +I
Sbjct: 110 FCKQLELN----GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
KG F G+ +A + G P+ Y +++ R G A + L +M E +
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225
Query: 183 PISRCFDLVTDGLKNCGKHDLA 204
+ + D L G D A
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAA 247
>gi|341605699|gb|AEK82952.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 185
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 103 VEEALDYFQTCXFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 162
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAF 126
LI A++K G +DEA L + E+G + Y +I G F
Sbjct: 163 LIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMF 204
>gi|260766045|gb|ACX50053.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 187
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 86/158 (54%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +K+G +++A RLLH +
Sbjct: 7 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 66
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+++G P Y+ ++ G + G+ ++A +F + G N Y++LI G+ GR
Sbjct: 67 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 126
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EA EM+E G T S C++ + D L GK D A
Sbjct: 127 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 164
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 31 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 90
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 91 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 149
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I + G+ D+A F ++ + ++ VYT I
Sbjct: 150 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTI 186
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L++ GL G L + MI++GS P++ + LI+ KSG VE + + + +
Sbjct: 10 LVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 69
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A
Sbjct: 70 GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEA 129
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
F E+ KG + Y LI + G+ EA M E
Sbjct: 130 ERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 173
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 7 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 66
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 67 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 126
Query: 202 DLAEKI 207
D AE++
Sbjct: 127 DEAERL 132
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
P +++ +I G + G+ ++ + F + KG PN +YT LI + G +A L
Sbjct: 5 PHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 64
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGK 200
M + G P + +V +GL G+
Sbjct: 65 RMIDEGFKPDVVTYSVVVNGLCKNGR 90
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG+ P + L+ G L +AK + +KM++ P++ T+ +LI+ + KSG+
Sbjct: 210 MAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGK 269
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + K G +V+TY LI K +DEA +LL +V G P Y
Sbjct: 270 VQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNI 329
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R + +DAF F + + P Y TL+ + A EM G
Sbjct: 330 LLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQLEVSLRS 216
P + +D + GL GK H+ E +E+++++ R+
Sbjct: 390 CPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 426
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL +G +++A ++++ M+K+G P++ T++ LI+ CK V+ ++
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G V TY IL+ ++ +A +++AF+L + + +P Y +++
Sbjct: 312 LEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 371
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
Q D A ++E+ KG PP+ Y TL R G+ EA + +M P R
Sbjct: 372 HKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPFGR 430
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + ++ GL +E A+ + KM+KQ +P++ T+N+LI +CK+
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G +Y LI K + A + +V P Y
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A + KG PN Y+ LI + R EA L +M G
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 319
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++++ + L K + A K+
Sbjct: 320 IAPTVVTYNILLNSLCRADKLEDAFKL 346
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L ++ A V +M +G PD +N ++ +C+ +VE ++ + K
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY LI + KA I+ A+ L + G+ P Y +I G ++ A
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ PN YTTLI + G+ AA L M + G+TP + + DG
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 196 KNCGKHDLAEK-IEQL 210
+ D A K +EQ+
Sbjct: 300 CKVRRVDEAHKLLEQM 315
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K F ++ L +E A++++ KM + + PD T+ ++E +CK+
Sbjct: 71 MRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERLCKTKR 129
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D Y ++ + + ++EA L +V+ NP Y
Sbjct: 130 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 189
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + + A+ F E+ KG+ P Y TLI + V A + +M
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN 249
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + DGL GK A ++
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEV 276
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ G ++ A +++ +M+ QG P + T+N L+ ++C++ +
Sbjct: 280 MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADK 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + + V TY L+ A+ +D A RL ++ G P Y
Sbjct: 340 LEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDT 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ G R G+ +A ++K+ P
Sbjct: 400 LAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P TFN++ + K+G +E E+Y + + G S Y ILI + K G DEA++L
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
LH + Y+ II + + ++A ++ + PP+ Y ++ +
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCK 126
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
R +A + EM G+ P + ++ V GL
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGL 159
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++L+ L A LE A ++ M ++ P + T+N+L+ +C +
Sbjct: 315 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 374
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
++ +Y + G D TY L +++AG + EA L+ + NPF
Sbjct: 375 LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPF 428
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVE 62
+GF P V L+ GL G L+ A + +MIK GS P+ T+NSLI C+ G+++
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + + GS DV TY L+ K +D+A+ LL+ + G P + ++
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R + DA E++ K P Y T++ R + EA +++E EM
Sbjct: 299 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCP 356
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P F+++ GL C + +E +E +E + R
Sbjct: 357 PNVVSFNIMIRGL--CKVNRSSEAMELVEEARR 387
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 3/196 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL A A ++ +M+ G PD+ T+ +LI CKS + + + ++ + G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKGAFRRGQFDDA 134
DV TY LI + K G + EA L +++ G P Y +I G R G+ D+A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ G P+ YTTL+ + R +A + L +MT GLTP F + DG
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 195 LKNCGKHDLAEKIEQL 210
L C ++ L++ + L
Sbjct: 301 L--CRENRLSDAVHIL 314
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 10/209 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M+++ P V +L+ GL G ++ A +++KM K+ P T+NSLI +CK
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 58 -SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
S + EM YS G D+ TY LI K+ D+A R+ LV G P
Sbjct: 131 ASEAYDLLEEMVYS----GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y+ +I G + G+ +A F IK PN Y +LI+ R G+ EA N L
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
M E G +P + + +G + D A
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDA 275
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+P V ++ L L A++ + +M + P++ T+ LI+ +CK G
Sbjct: 37 MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96
Query: 61 VEFCVEMYYSVCKLGSCADVS-TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ V + + K C + TY LI + KA EA+ LL +V G P Y
Sbjct: 97 VDEAVALLSKMRK--KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYT 154
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + DDA F ++ +G P+ Y+ LI + GR EA + M +
Sbjct: 155 TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 214
Query: 180 G-LTPISRCFDLVTDGLKNCGKHDLA 204
G P + ++ + G GK D A
Sbjct: 215 GSCMPNTVTYNSLISGFCRMGKMDEA 240
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+QGL LE A + KM+ +G PD+ T+ ++I +C + + +
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY +LI + K G +DEA LL + + P Y +I G + + +A+
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAY 135
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ G P+ YTTLIT + + +A ++ G P + + DGL
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195
Query: 196 KNCGKHDLAEKIE 208
C + L E I+
Sbjct: 196 --CKEGRLKEAID 206
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 3/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G +P V L+ G L+ A ++N+M ++G PD+ TF SL++ +C+
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + + V TY ++ +A ++EA + + L E P +
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNI 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
+I+G + + +A E + + P+ +YTT+I R + EA +M E
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G P S + + GL N G D A
Sbjct: 425 GCLPNSITYSTLVTGLCNAGMLDRAR 450
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 7/208 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P V L+ GL L A ++ +M ++ P + T+N++++ C++ +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + ++ +V ++ I+I + K EA L+ NP +Y
Sbjct: 342 LEEARK--FMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R + D+A + + ++ G PN Y+TL+T G A Y+ E
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EK 455
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++L+ D + + + A ++
Sbjct: 456 GCVPNIGTYNLLIDAFRKANRDEDAREL 483
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
D T+ SLI+ +CK +E + + G DV TY +I A+ + EA + L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ P Y +I G + G+ D+A S+++ K P Y +LI+ +
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKA 128
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQL 210
R EA + L EM G P + + G K D A ++ EQL
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 76 SC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
SC AD TY LI + K +++A L +V G +P Y +I + +A
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ + PN YT LI +GGR EA L +M + P + ++ + G
Sbjct: 66 RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISG 124
Query: 195 LKNCGKHDLAEKIEQLE 211
L C +E + LE
Sbjct: 125 L--CKAERASEAYDLLE 139
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ +P +L+ GL AG L A+ + K++ G P + SLI +C +
Sbjct: 314 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 373
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + G TY ++I A K GM++EA L+ ++EDGH P Y
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI----------TMCGRGGRFVEAA 170
++ G + + ++A F+E++ G PNR + T+I C R G+ EA
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQR-GKLDEAF 492
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L MT+ G P + + GL + + D A +
Sbjct: 493 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 529
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ L+ GL AG ++ A+++++ M+ G PD+ T+N+L+ C++G+
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + G +V TY L+ + KA + EA + + G P Y
Sbjct: 593 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 652
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G GQ D F E+ G P+ VY TL + GR A L E E
Sbjct: 653 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 712
Query: 181 LTPI--SRCFDLVTDGLKNCGKHDLA 204
+ + DGL GK ++A
Sbjct: 713 RSEAWGDEVYRFAVDGLLEAGKMEMA 738
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P ++++ G LE A ++ KMI+ G PD+ T+N++++ +CKS
Sbjct: 384 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 443
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA---------GMIDEAFRLLHNLVEDGH 111
VE + ++ + +LG + ++ +I + + G +DEAFRLL + +DGH
Sbjct: 444 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH 503
Query: 112 NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN 171
P Y+ +I G + DDA ++ + P TLI + GR EA
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 563
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L M G +P ++ + G G+ + A ++
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 599
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D G P V L+ GL + ++ A+ ++ M+K+ P + T N+LI +CK+G
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ ++ G DV TY L+ +AG + A LL ++V G P Y
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 617
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + +A F+++K G PN YT LI G+ EM G
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 677
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLEVSLRS 216
++P + + L G+ A E + + SLRS
Sbjct: 678 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 714
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY----- 68
++L++G + G ++ A++++ M + PD ++ ++++ +CK+G VE V ++
Sbjct: 216 NVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDREL 275
Query: 69 ---------------YSVCKLGSCA---------------------DVSTYKILIPAVSK 92
Y++ LG C D +Y ILI ++K
Sbjct: 276 PSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAK 335
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
AG +++A L L+ G P Y +I G FDDA F+++ +G PP+
Sbjct: 336 AGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVT 395
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
Y +I + G EA + + +M E G P ++ V DGL
Sbjct: 396 YNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 438
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 9/211 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNA---------GYLESAKQMVNKMIKQGSDPDLETFNSL 51
M G P R + ++ GL G L+ A +++ +M G PD+ T+++L
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513
Query: 52 IETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH 111
I +C V+ + + K V T LI + KAG I EA +L +V G
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 112 NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN 171
+P Y ++ G R GQ + A S++ +G PN YT L++ + R EA
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+M G P + + G + G+ D
Sbjct: 634 VFAQMKSSGCAPNLFTYTALILGFCSAGQVD 664
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
+RG ++++ GL ++ A QM KM ++ PD ++ LI+ + K+G++ ++
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ G Y LI + A D+A L ++ G P P Y +I + +RG
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
++A ++ GH P+ Y T++ + R EA EM +G TP R +
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467
Query: 190 LVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ GL K D A + +L+ + R
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFR 493
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 9/213 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+K D ++ GL+++G ++ A Q+ + ++ P L T N L+E C G+
Sbjct: 171 MSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQ 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN------LVEDGHNPF 114
V+ E+ ++ D +Y ++ + KAG ++EA RL + P
Sbjct: 228 VDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPS 287
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y +I G + + D+A F ++ + P+ Y LI + G+ +A N
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ G+TP + + + GL D A ++
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 380
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G +AG ++ ++ +M+ G PD + +L +CKSG
Sbjct: 638 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 697
Query: 61 VEFCVEMYYS---VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+E+ + + D Y+ + + +AG ++ A + ++V G P P
Sbjct: 698 SARALEILREGRESLRSEAWGD-EVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPER 756
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEI 141
A ++ G + GQ +A EI
Sbjct: 757 CASLVAGLCKSGQGGEARAVLEEI 780
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 82/192 (42%), Gaps = 5/192 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++QG N G A ++ + ++++ P + +N LI+++ K E E +M + G
Sbjct: 16 VIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRG 74
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D T+ ++ + KAG +DEA ++ + P+ + + + RG + AF
Sbjct: 75 CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAF 134
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + N Y ++ + R +A M+E + + D V GL
Sbjct: 135 QLLEIMPV----ANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGL 190
Query: 196 KNCGKHDLAEKI 207
+ G+ D A ++
Sbjct: 191 MDSGRIDEALQV 202
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V L+ L N+G +E A ++ +M+K+G P++ T +SL++ G
Sbjct: 271 MVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGT 330
Query: 61 VEFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++M+ + + G +V Y L+ G ID+A + ++ E G +P Y
Sbjct: 331 TFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYG 390
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G +RG + A ++++ G PN VYT+++ R +F EA + + M++
Sbjct: 391 SLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKE 450
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVSLR 215
P F+ GL + G+ D AEK+ Q+E R
Sbjct: 451 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYR 487
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P ++ + G ++ +Q+ + +P + +N+LI +CK +
Sbjct: 206 MSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCKERD 260
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE+ + + G +V +Y LI +S +G I+ AF LL +++ G +P +
Sbjct: 261 YKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSS 320
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++KG F RG DA +++ I+ G PN Y TL+ G +A + + M E+
Sbjct: 321 LVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEI 380
Query: 180 GLTPISRCFDLVTDGLKNCG 199
G +P R + + +G G
Sbjct: 381 GCSPNIRTYGSLINGFTKRG 400
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 5/179 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V+ + ++ LL ++ + M + G +P++ T+N L++ +CK+ +V+
Sbjct: 140 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 199
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G C + +Y +I ++ + GM+ E +L P S+Y +I G
Sbjct: 200 KKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALING 254
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + SE+ KG PN Y+TLI G+ A + L +M + G P
Sbjct: 255 LCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHP 313
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 3/219 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSG 59
M +G +P + LV+G G A M N+MI+ G P++ +N+L++ C G
Sbjct: 306 MLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHG 365
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ V ++ + ++G ++ TY LI +K G ++ A + + ++ G P +Y
Sbjct: 366 NIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYT 425
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+++ R +F +A + + P+ P + I GR A +M +
Sbjct: 426 SMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 485
Query: 180 GLTPIS-RCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P + ++ + DGL + + A + + E+ +R V
Sbjct: 486 YRCPPNIVTYNELLDGLAKANRIEEAYGLTR-EIFMRGV 523
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++++ L G ++S + ++ +M QG + F S+I + G E VEM+Y + +
Sbjct: 79 EVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE 138
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V Y ++ + I + + ++ DG P Y ++K + + D
Sbjct: 139 FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDG 198
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A E+ KG PN YTT+I +MC G V+ L E E P+ ++ +
Sbjct: 199 AKKLLVEMSNKGCCPNAVSYTTVISSMCEVG--MVKEGRQLAERFE----PVVSVYNALI 252
Query: 193 DGLKNCGKHDLAEKIE 208
+GL C + D +E
Sbjct: 253 NGL--CKERDYKGGVE 266
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +V+ L + A+ ++ M K+ P + TFN+ I+ +C +G
Sbjct: 412 MLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 471
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ +++ + + C ++ TY L+ ++KA I+EA+ L + G S Y
Sbjct: 472 LDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYN 531
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G+ G A ++ + G P+ +I + G+ E A ++++
Sbjct: 532 TLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGK-AERAVQMLDLVSC 590
Query: 180 G 180
G
Sbjct: 591 G 591
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G + L+ G NAG A Q+V KM+ G PD T N +I CK G+ E
Sbjct: 521 RGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAER 580
Query: 64 CVEMYYSVCKLGSCA------DVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
V+M L SC DV +Y +I + ++ ++ L ++ +
Sbjct: 581 AVQML----DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISE 628
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + +++ G ++ A + +KM+K GS P++ T+N+LI CK G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G D TY LI S+ G ++ A L + ++E G +P Y
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G F + DDA F ++ G+ P+ Y +I+ + EA N+ +M + G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + DGL G+ LA KI
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKI 609
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L+ GL G E A + +KM+ G P T+N+LI +C G
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + GS TY +I G I +A + +++ G +P Y
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G ++A +K G P+ YT LI+ RGG+ A + M E G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++P + + DG N K D A
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDA 536
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + + L +AG A +++ KM K+G P+++TF +LI + + G+
Sbjct: 298 MVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGK 357
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +Y+ + G TY LI + G + AF + ++ G P Y
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK G A F ++ G PN Y TLI + G A L M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + G GK + A +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSL 504
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G G LE A + M++ G P+ T+ ++I+ +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + +++ + + G+ TY ++I SK I EA +V+ G P Y
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF--VEAANYLMEMTE 178
I G R G+ AF F E++ + + PN Y++LI + GR E N L +T
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
G P + + GL CG+ E +QL VS++
Sbjct: 653 YGCEPNVDTYTTLVKGL--CGEGRCYEA-DQLVVSMQ 686
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A+ M KM+ G P L TFN++I +CK G V+ + + + + + TY LI
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ +D AF + +V+DG +P Y+ +I G G+ ++A E+ KG P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305
Query: 149 NRPVYTT-LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
YT L+++C G EA L +M + G P + F + GL GK ++A
Sbjct: 306 TVYTYTIPLVSLCDAGCS-SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P L+ GL + G LE A M+ +M+++G +P + T+ + ++C +G
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE+ + K G ++ T+ LI +S+ G + A L H ++ DG P Y
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+F+ AF F + G P+ Y +I G +A +M + G
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P ++ + G C + +L + LE+
Sbjct: 443 SSPNVITYNTLIYGY--CKQGNLNNAMRLLEI 472
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ G G L +A +++ M G PD T+ LI + G+
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++Y + + G + TY +I +D+A L +VE G+ P Y
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +A F ++ +G PN YT+ I R GR A EM +
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P + + GL G+ + AE
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAE 642
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 7/185 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G L+ A M ++M+K G DP+ T+++LI +C G +E ++M + + G
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY I + ++ AG EA LL + + G P + +I G R G+F+ A
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-------ISRCF 188
+ ++ G P Y LI GRF A M G P I +CF
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422
Query: 189 DLVTD 193
L+ D
Sbjct: 423 CLMGD 427
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P ++ G N ++ A + KM++ G+ P +T+N +I K+
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ FC +M K G +V TY I + + G AF++ H + + N FP+
Sbjct: 568 ISEAENFCGKM----VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM--EKRNYFPN 621
Query: 117 LY--APIIKGAFRRGQFDDA--FCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAAN 171
LY + +I G + G+ +DA + + + G PN YTTL+ +CG GR EA
Sbjct: 622 LYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGE-GRCYEADQ 680
Query: 172 YLMEMTEMGLTP 183
++ M + GL P
Sbjct: 681 LVVSMQKKGLQP 692
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + ++ L G ++ AK +++ + + + P+ T+ SLI C++
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M+ + K G + TY LI + G ++EA +L +V+ G P Y
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G +A ++K +G PN +T LI+ R G+F A +M G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + ++ + + L G+ + A I + +S
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM-IKQGSDPDLETFNSLIETICKSGEV 61
D+ F P R L+++ N G ++ Q ++++ K L +F +L+ + K V
Sbjct: 124 DRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMV 183
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +MY + G + T+ +I + K G + EA ++ ++ P Y +
Sbjct: 184 DLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSL 243
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G R D AF F + G PN Y+TLI GR EA + L EM + G+
Sbjct: 244 ILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGI 303
Query: 182 TP 183
P
Sbjct: 304 EP 305
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V LV+GL G A Q+V M K+G P E + +L+ CK+ +
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLK 709
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++YS+ LG +S YK LI A+ K I+EA + ++E N +
Sbjct: 710 VESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTV 769
Query: 121 IIKGAFRRGQFD 132
++ G + G+ D
Sbjct: 770 LLDGLLKEGETD 781
>gi|341605791|gb|AEK82998.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C + + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCXNALIDALTKHGKVDEA 176
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCXNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y G
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D
Sbjct: 103 VEEALD-YFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCXN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|341605803|gb|AEK83004.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605805|gb|AEK83005.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605823|gb|AEK83014.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T+ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILIXG 202
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 3/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M +G P ++QG G L AK++V++MI +G PD+ F+S+I ++CK G
Sbjct: 501 MVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDG 560
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V +++ +G V T+ LI G +D+AF++L + G P Y
Sbjct: 561 RVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYN 620
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G F+ G+ +D F E++ KG PN Y ++ R GR V A EM E
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Query: 180 GLTPISRCFDLVTDGL--KNCG 199
G T + ++ GL NC
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCA 702
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P ++ G G L+ A +M +M K+G P++ T NS + ++CK G
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + S+ G D+ +Y L+ + G + L +++ +G ++
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG DDA F+E++ +G P+ Y+T+I+ R GR +A +M G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505
Query: 181 LTPISRCFDLVTDGL 195
+ P + + + G
Sbjct: 506 IQPNTAVYSSIIQGF 520
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKS 58
MS+ G P ++++ L + + A ++ M KQG PD+ ++++I
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GE +++ + + G DV TY ++I A+ KA +D+A +L + DG P Y
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTY 338
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +I G G+ +A F E+K +G PN + + + GR EAA + MT
Sbjct: 339 SCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTA 398
Query: 179 MGLTP 183
G P
Sbjct: 399 KGHKP 403
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 1/213 (0%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+D G P V + L+ G G ++ A ++++ M G +PD+ T+N+L++ K+G +
Sbjct: 573 TDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRI 632
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ ++ + + G + TY I++ + +AG A + H ++E G S+Y I
Sbjct: 633 NDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGII 692
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G R D+A F ++ + + T+I + R EA ++ GL
Sbjct: 693 LGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGL 752
Query: 182 TPISRCFD-LVTDGLKNCGKHDLAEKIEQLEVS 213
P + ++ + LK+ G D +E S
Sbjct: 753 LPNESTYGVMIINLLKDGGVEDANNMFSSMEKS 785
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V ++ G N G A + ++M +QG PD+ T+N +I+ +CK+ ++
Sbjct: 262 SPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + G+ D TY +I + G + EA ++ + + G P +
Sbjct: 322 VLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC 381
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ +A FF + KGH P+ Y TL+ G F + M G+
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCH 441
Query: 187 CFDLVTDGLKNCGKHDLA 204
F ++ G D A
Sbjct: 442 VFTILIHAYAKRGMVDDA 459
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V ++ G L A + N+M+ +G P+ ++S+I+ C G
Sbjct: 466 MQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGG 525
Query: 61 VEFCVEMYYSVCKLG-SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ E+ + G D+ + +I ++ K G + +A + + G P +
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFN 585
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G G+ D AF +++ G P+ Y TL+ + GR + EM
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK 645
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK 206
G+ P + + ++ GL G+ A K
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARK 672
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +++ GL AG +A++ ++MI+ G+ + + ++ +C++
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNC 701
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + ++ +I A+ K +EA L + G P S Y
Sbjct: 702 ADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGV 761
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+I + G +DA FS ++ G P + +I M G +A NYL
Sbjct: 762 MIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 3/172 (1%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
Q + P T+N L++ C++ + + ++ + + G D T L+ + A +E
Sbjct: 151 QVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEE 210
Query: 99 AFR-LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP--PNRPVYTT 155
A LLH + E G P Y+ ++K A + +G P+ Y+T
Sbjct: 211 AVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYST 270
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+I G +A + EMT G+ P ++L+ D L D AE +
Sbjct: 271 VIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
>gi|341605701|gb|AEK82953.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEA 176
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRMEE 185
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 38/164 (23%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C G D Y
Sbjct: 103 VEEALD-YFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A+ K G +DEA L + E+G + Y +I G F+
Sbjct: 162 ALIDALXKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L+ G+ +G ++A QM ++M ++ P+ T+ +I +C++ + + +
Sbjct: 194 PNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRL 253
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ G D TY L+ K G +DEA LL +D + Y+ +I G FR
Sbjct: 254 FIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFR 313
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+F+DA ++ ++ P+ +YT ++ + G+F +A L EMTE GL P + C
Sbjct: 314 ARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHC 373
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + G + G D A+ + LE+S
Sbjct: 374 YNALIKGYCDLGLLDEAKSL-HLEIS 398
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV--- 71
+L+ G+ +G + A+Q+ N+M K G P + TFN+LI+ CK+G +E ++Y +
Sbjct: 411 ILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIG 470
Query: 72 ------CKLGSCA----DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+L A D ++ + ++ + +G+I +A+ +L L + G P Y +
Sbjct: 471 RNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNIL 530
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + G + AF F E+++KG P+ Y TLI R +A L ++ + G
Sbjct: 531 IHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGC 590
Query: 182 TPISRCF 188
TPI+ +
Sbjct: 591 TPITEVY 597
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 106/220 (48%), Gaps = 13/220 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ P V ++++GL AG + A +++N+M ++G PD +N+LI+ C G
Sbjct: 327 MTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGL 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K + TY ILI + ++G++ +A ++ + + + G P +
Sbjct: 387 LDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNA 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP---------PNRPVYT----TLITMCGRGGRFV 167
+I G + G + A F +++I +P NR + T T++ G +
Sbjct: 447 LIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLIL 506
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+A N LM++T+ G P ++++ G G + A K+
Sbjct: 507 KAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKL 546
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM-----------IKQGSDPDLET-- 47
M G P V + L+ G AG +E A+ + KM + QG++ L+T
Sbjct: 432 MEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTAS 491
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+++E +C SG + + + G ++ TY ILI KAG I+ AF+L L
Sbjct: 492 LQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQ 551
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
G +P Y +I G + +DAF +I G P VY + +T R +
Sbjct: 552 LKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKIT 611
Query: 168 EA 169
A
Sbjct: 612 LA 613
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 84/205 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L+ G G ++ A ++ K D + ++ LI+ + ++
Sbjct: 257 MKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARR 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E Y + + DV Y I++ +SKAG +A RLL+ + E G P Y
Sbjct: 317 FEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNA 376
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG G D+A EI + YT LI R G +A EM + G
Sbjct: 377 LIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHG 436
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P F+ + DG G + A+
Sbjct: 437 CYPSVVTFNALIDGFCKAGNIEKAQ 461
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 61/123 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L ++G + A ++ ++ G P++ T+N LI CK+G + +++ + G
Sbjct: 495 MVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKG 554
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI + A ++AF +L ++++G P +Y + + RR + AF
Sbjct: 555 LSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAF 614
Query: 136 CFF 138
+
Sbjct: 615 SLW 617
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 11/212 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D GF P + ++L+ G AG + A ++ ++ +G PD T+ +LI + +
Sbjct: 515 LTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANR 574
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + K G YK + + I AF L + P +
Sbjct: 575 EEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRS----IPGRDSE 630
Query: 121 IIKGA---FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
++K F +G+ ++A E+ K + YT + + GR EA +
Sbjct: 631 VLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLE 690
Query: 178 EMG--LTPISRCFDLVTDGLKNCGKHDLAEKI 207
E +TP S C L+ LK G DLA +I
Sbjct: 691 EHNVLVTPPS-CVKLIYRLLK-VGNLDLAAEI 720
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 83/193 (43%)
Query: 12 GRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV 71
++++ L+ E Q++ ++ + G + F LI+ K +E VE + +
Sbjct: 93 SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMM 152
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
DV TY ++ + + ++ A + + +++ P + ++ +I G + G+
Sbjct: 153 KDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKT 212
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+A F E+ + PN+ YT +I+ + + A + M + G P S ++ +
Sbjct: 213 QNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNAL 272
Query: 192 TDGLKNCGKHDLA 204
G G+ D A
Sbjct: 273 LHGFCKLGRVDEA 285
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G + A +V++M++ G PD+ T+NS++ IC+SG+
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + ADV TY +I ++ + G ID A L + G Y +++G
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+++D ++ + PN + L+ + + G+ EA EM G++P
Sbjct: 263 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++ + DG C ++ L+E L++ +R+
Sbjct: 323 IITYNTLMDGY--CMQNRLSEANNMLDLMVRN 352
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G +LVQG +G ++ A+++ +M+ G PD+ T+ L++ +C +G+
Sbjct: 384 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 443
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ + K + Y +I + K G +++A+ L +L G P Y
Sbjct: 444 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 503
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A +++ G+ PN Y TLI R G +A + EM G
Sbjct: 504 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 563
Query: 181 LTPISRCFDLVTDGL 195
+ + +V D L
Sbjct: 564 FSADASSIKMVIDML 578
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + LV+GL AG ++ M+ + P++ TFN L++ K G+
Sbjct: 244 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 303
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + G ++ TY L+ + EA +L +V + +P +
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 363
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + DD F I +G N Y+ L+ + G+ A EM G
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
+ P + ++ DGL + GK + A +I E L+ S
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 457
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
M +G +P + + L+ G L A M++ M++ PD+ TF SLI
Sbjct: 314 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 373
Query: 53 ---------------------------ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ C+SG+++ E++ + G DV TY I
Sbjct: 374 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 433
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G +++A + +L + + +Y II+G + G+ +DA+ F + KG
Sbjct: 434 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 493
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
PN YT +I+ + G EA L +M E G P
Sbjct: 494 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 531
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ K++K G +PD TFN+LI+ + G+V V + + + G DV TY ++
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ ++G A LL + E Y+ II R G D A F E++ KG
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y +L+ + G++ + A L +M + P F+++ D GK A ++
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 310
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + +V G+ +G A ++ KM ++ D+ T++++I+++C+ G
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 233
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + V TY L+ + KAG ++ LL ++V P +
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A + E+ +G PN Y TL+ R EA N L M
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353
Query: 181 LTPISRCFDLVT 192
+P D+VT
Sbjct: 354 CSP-----DIVT 360
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G ++ T N +I C+ + F + V KLG D +T+ LI + G + E
Sbjct: 107 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 166
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A L+ +VE+G P Y I+ G R G A +++ + + Y+T+I
Sbjct: 167 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 226
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
R G A + EM G+ ++ + GL GK +
Sbjct: 227 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 270
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 79/187 (42%), Gaps = 9/187 (4%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE----VEFCVEMY 68
R+ L G+++ + A + +MI+ P L F+ I ++ + ++FC ++
Sbjct: 47 RERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE 105
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ G ++ T I+I + A+ +L +++ G+ P + + +IKG F
Sbjct: 106 LN----GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 161
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
G+ +A + G P+ Y +++ R G A + L +M E + +
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221
Query: 189 DLVTDGL 195
+ D L
Sbjct: 222 STIIDSL 228
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L+ GL G + A +V++M++ G PD+ T+NS++ IC+SG+
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+M + + ADV TY +I ++ + G ID A L + G Y +++G
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+++D ++ + PN + L+ + + G+ EA EM G++P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++ + DG C ++ L+E L++ +R+
Sbjct: 333 IITYNTLMDGY--CMQNRLSEANNMLDLMVRN 362
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G +LVQG +G ++ A+++ +M+ G PD+ T+ L++ +C +G+
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ + K + Y +I + K G +++A+ L +L G P Y
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A +++ G+ PN Y TLI R G +A + EM G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 LTPISRCFDLVTDGL 195
+ + +V D L
Sbjct: 574 FSADASSIKMVIDML 588
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
M +G +P + + L+ G L A M++ M++ PD+ TF SLI
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 53 ---------------------------ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ C+SG+++ E++ + G DV TY I
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G +++A + +L + + +Y II+G + G+ +DA+ F + KG
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
PN YT +I+ + G EA L +M E G P
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + LV+GL AG ++ M+ + P++ TFN L++ K G+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + G ++ TY L+ + EA +L +V + +P +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + DD F I +G N Y+ L+ + G+ A EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
+ P + ++ DGL + GK + A +I E L+ S
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ K++K G +PD TFN+LI +C G+V V + + + G D+ TY ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ ++G AF +L + E Y+ II R G D A F E++ KG
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y +L+ + G++ + A L +M + P F+++ D GK A ++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + +V G+ +G A M+ KM ++ D+ T++++I+++C+ G
Sbjct: 184 MVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + V TY L+ + KAG ++ LL ++V P +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A + E+ +G PN Y TL+ R EA N L M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 181 LTPISRCFDLVT 192
+P D+VT
Sbjct: 364 CSP-----DIVT 370
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G ++ T N +I C+ + F + V KLG D +T+ LI + G + +
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSK 176
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A L+ +VE+G P Y I+ G R G AF +++ + + Y+T+I
Sbjct: 177 AVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIID 236
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
R G A + EM G+ ++ + GL GK +
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P V + L+ GL N G + A M +KM+ G P+L T++SLI CK+G
Sbjct: 322 MLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++M+ SV G+ Y +LI A K G ID+ F L + +G P Y
Sbjct: 382 MKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G + A F ++ KG P + + C R G +AA L EM++MG
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSR-GESRKAAMLLKEMSKMG 500
Query: 181 LTPISRCFDLVTDG 194
L P ++++ G
Sbjct: 501 LKPRHLTYNIMMKG 514
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + ++L+ G L + ++ +M+ Q P++ T+NSLI +C G+
Sbjct: 287 MVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGK 346
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M + G ++ TY LI K GM+ EA + ++ G P +Y
Sbjct: 347 INEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNM 406
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DD F E++ +G P+ Y LI R G A ++T G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466
Query: 181 LTPISRCFDLVTDG 194
L P F ++ +G
Sbjct: 467 L-PDLVTFHILMEG 479
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 3/206 (1%)
Query: 5 GFNPPVRGRDLLVQG---LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
G++P V + L+ G L G + A ++ +M++ P+L TFN LI+ K +
Sbjct: 253 GYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNL 312
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++++ + +V TY LI + G I+EA + +V G P Y +
Sbjct: 313 PGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSL 372
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + G +A F +K +G P +Y LI + G+ + EM G+
Sbjct: 373 INGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL G + A+K+
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKL 458
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ GL G +E+AK++ +++ +G PDL TF+ L+E C GE
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGE 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP-SLYA 119
+ + K+G TY I++ K G + A + + ++ + Y
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
+++G ++G+ +DA +E+ KG PNR Y
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 95/216 (43%), Gaps = 7/216 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M + P V ++++ L G + A+ ++ M G P++ ++N+LI+ CK
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGG 273
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+G++ + + + +++T+ ILI K + + ++ +++ P
Sbjct: 274 NGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G G+ ++A ++ G PN Y +LI + G EA + +
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHD----LAEKIEQ 209
G P +R ++++ D GK D L E++E+
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LL + + +MI++ P++ TFN +I +CK+G++ ++ + G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFR---LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+V +Y LI K G + ++ +L +VE+ +P + + +I G ++
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ F E+ + PN Y +LI GG+ EA +M G+ P
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQP 364
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 75/200 (37%), Gaps = 20/200 (10%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETF------------NSLIETI-----CKS 58
L+ L NA + ++ ++ GSD + + NS+I + +
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
E E + G + K L+ A+ K + L ++ P +
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTF 226
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT---MCGRGGRFVEAANYLME 175
+I + G+ + A ++K+ G+ PN Y TLI G G+ +A L E
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 176 MTEMGLTPISRCFDLVTDGL 195
M E ++P F+++ DG
Sbjct: 287 MVENEVSPNLTTFNILIDGF 306
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVE 62
+GF P V L+ GL G L+ A + +MIK GS P+ T+NSLI C+ G+++
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + + GS DV TY L+ K +D+A+ LL+ + G P + ++
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R + DA E++ K P Y T++ R + EA +++E EM
Sbjct: 299 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCP 356
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P F+++ GL C + +E +E +E + R
Sbjct: 357 PNVVSFNIMIRGL--CKVNRSSEAMELVEEARR 387
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 3/196 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL A A ++ +M+ G PD+ T+ +LI CKS + + + ++ + G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKGAFRRGQFDDA 134
DV TY LI + K G + EA L +++ G P Y +I G R G+ D+A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ G P+ YTTL+ + R +A + L +MT GLTP F + DG
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 195 LKNCGKHDLAEKIEQL 210
L C ++ L++ + L
Sbjct: 301 L--CRENRLSDAVHIL 314
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 10/209 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M+++ P V +L+ GL G ++ A +++KM K+ P T+NSLI +CK
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 58 -SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
S + EM YS G D+ TY LI K+ D+A R+ LV G P
Sbjct: 131 ASEAYDLLEEMVYS----GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y+ +I G + G+ +A F IK PN Y +LI+ R G+ EA N L
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
M E G +P + + +G + D A
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDA 275
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+P V ++ L L A++ + +M + P++ T+ LI+ +CK G
Sbjct: 37 MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96
Query: 61 VEFCVEMYYSVCKLGSCADVS-TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ V + + K C + TY LI + KA EA+ LL +V G P Y
Sbjct: 97 VDEAVALLSKMRK--KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYT 154
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + DDA F ++ +G P+ Y+ LI + GR EA + M +
Sbjct: 155 TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 214
Query: 180 G-LTPISRCFDLVTDGLKNCGKHDLA 204
G P + ++ + G GK D A
Sbjct: 215 GSCMPNTVTYNSLISGFCRMGKMDEA 240
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+QGL LE A + KM+ +G PD+ T+ ++I +C + + +
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY +LI + K G +DEA LL + + P Y +I G + + +A+
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAY 135
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ G P+ YTTLIT + + +A ++ G P + + DGL
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195
Query: 196 KNCGKHDLAEKIE 208
C + L E I+
Sbjct: 196 --CKEGRLKEAID 206
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 7/208 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P V L+ GL L A ++ +M ++ P + T+N++++ C++ +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + ++ +V ++ I+I + K EA L+ NP +Y
Sbjct: 342 LEEARK--FMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R + D+A + + ++ G PN Y+TLIT G A Y+ E
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EK 455
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++L+ D + + + A ++
Sbjct: 456 GCVPNIGTYNLLIDAFRKANRDEDAREL 483
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 3/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G +P V L+ G L+ A ++N+M ++G PD+ TF SL++ +C+
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + + V TY ++ +A ++EA + + L E P +
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNI 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
+I+G + + +A E + + P+ +YTT+I R + EA +M E
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G P S + + GL N G D A
Sbjct: 425 GCLPNSITYSTLITGLCNAGMLDRAR 450
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
D T+ SLI+ +CK +E + + G DV TY +I A+ + EA + L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ P Y +I G + G+ D+A S+++ K P Y +LI+ +
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKA 128
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQL 210
R EA + L EM G P + + G K D A ++ EQL
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 76 SC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
SC AD TY LI + K +++A L +V G +P Y +I + +A
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ + PN YT LI +GGR EA L +M + P + ++ + G
Sbjct: 66 RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISG 124
Query: 195 LKNCGKHDLAEKIEQLE 211
L C +E + LE
Sbjct: 125 L--CKAERASEAYDLLE 139
>gi|399107194|gb|AFP20361.1| At1g03560-like protein, partial [Capsella grandiflora]
gi|399107216|gb|AFP20372.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 92/177 (51%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 187
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 105 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 164
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 165 LIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 207
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + +++ G ++ A + +KM+K GS P++ T+N+LI CK G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G D TY LI S+ G ++ A L + ++E G +P Y
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G F + DDA F ++ G+ P+ Y +I+ + EA N+ +M + G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + DGL G+ LA KI
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKI 609
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L+ GL G E A + +KM+ G P T+N+LI +C G
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + GS TY +I G I +A + +++ G +P Y
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G ++A +K G P+ YT LI+ RGG+ A + M E G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++P + + DG N K D A
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDA 536
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + + L +AG A +++ KM K+G P+++TF +LI + + G+
Sbjct: 298 MVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGK 357
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +Y+ + G TY LI + G + AF + ++ G P Y
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK G A F ++ G PN Y TLI + G A L M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + G GK + A +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSL 504
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G G LE A + M++ G P+ T+ ++I+ +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + +++ + + G+ TY ++I SK I EA +V+ G P Y
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF--VEAANYLMEMTE 178
I G R G+ AF F E++ + + PN Y++LI + GR E N L +T
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
G P + + GL CG+ E +QL VS++
Sbjct: 653 YGCEPNVDTYTTLVKGL--CGEGRCYEA-DQLVVSMQ 686
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A+ M KM+ G P L TFN++I +CK G V+ + + + + + TY LI
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ +D AF + +V+DG +P Y+ +I G G+ ++A E+ KG P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305
Query: 149 NRPVYTT-LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
YT L+++C G EA L +M + G P + F + GL GK ++A
Sbjct: 306 TVYTYTIPLVSLCDAGCS-SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P L+ GL + G LE A M+ +M+++G +P + T+ + ++C +G
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE+ + K G ++ T+ LI +S+ G + A L H ++ DG P Y
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+F+ AF F + G P+ Y +I G +A +M + G
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P ++ + G C + +L + LE+
Sbjct: 443 SSPNVITYNTLIYGY--CKQGNLNNAMRLLEI 472
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 7/185 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G L+ A M ++M+K G DP+ T+++LI +C G +E ++M + + G
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY I + ++ AG EA LL + + G P + +I G R G+F+ A
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-------ISRCF 188
+ ++ G P Y LI GRF A M G P I +CF
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422
Query: 189 DLVTD 193
L+ D
Sbjct: 423 CLMGD 427
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ G G L +A +++ M G PD T+ LI + G+
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++Y + + G + TY +I +D+A L +VE G+ P Y
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +A F ++ +G PN YT+ I R GR A EM +
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P + + GL G+ + AE
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAE 642
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P ++ G N ++ A + KM++ G+ P +T+N +I K+
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ FC +M K G +V TY I + + G AF++ H + + N FP+
Sbjct: 568 ISEAENFCGKM----VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM--EKRNYFPN 621
Query: 117 LY--APIIKGAFRRGQFDDA--FCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAAN 171
LY + +I G + G+ +DA + + + G PN YTTL+ +CG GR EA
Sbjct: 622 LYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGE-GRCYEADQ 680
Query: 172 YLMEMTEMGLTP 183
++ M + GL P
Sbjct: 681 LVVSMQKKGLQP 692
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + ++ L G ++ AK +++ + + + P+ T+ SLI C++
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M+ + K G + TY LI + G ++EA +L +V+ G P Y
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G +A ++K +G PN +T LI+ R G+F A +M G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + ++ + + L G+ + A I + +S
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V LV+GL G A Q+V M K+G P E + +L+ CK+ +
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLK 709
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++YS+ LG +S YK LI A+ K I+EA + ++E N ++
Sbjct: 710 VESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTV 769
Query: 121 IIKGAFRRGQFD 132
++ G + G+ D
Sbjct: 770 LLDGLLKEGETD 781
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM-IKQGSDPDLETFNSLIETICKSGEV 61
D+ F P R L+++ N G ++ Q ++++ K L +F +L+ + K V
Sbjct: 124 DRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMV 183
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +MY + G + T+ +I + K G + EA ++ ++ P Y +
Sbjct: 184 DLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSL 243
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G R D AF F + G PN Y+TLI GR EA + L EM + G+
Sbjct: 244 ILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGI 303
Query: 182 TP 183
P
Sbjct: 304 EP 305
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P + L+ G ++G + A + KM + G +PD+ T+N+L+ +CK+G
Sbjct: 232 MLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGR 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D S Y L+ + G + + +LL +V +G P ++
Sbjct: 292 SMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNI 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G D+A FS+++ +G PN Y T++ R G+ +A + + G
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP F + GL C K D AE++
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEEL 438
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL + A+++ +MI +G P+ FN+L+ +CK G V ++ + ++
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI G +DEA +LL +V DG P Y II G + G+ +DA
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ KG P +Y+T++ + R A + M + G+ ++++ GL
Sbjct: 542 SLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGL 601
Query: 196 --KNC 198
NC
Sbjct: 602 CQNNC 606
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G GYL Q+++ M++ G+ PD FN LI K G
Sbjct: 302 MVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGM 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + + G ++ TY ++ A+ + G +D+A L+ +G P ++
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRT 421
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++D A E+ +G PN + TL+ + G A N M +
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + DG GK D A K+
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKL 508
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM-YYSVCKLGSCADVS 81
AG+L+ A + ++I+ G TF+ L++ +C +++ + LG +
Sbjct: 109 AGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAF 168
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVED----GHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
+Y IL+ + +A LLH ++ D G P Y +I G R GQ D A+C
Sbjct: 169 SYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCL 228
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F E+ +G PN Y L+ G+ EA +M G+ P
Sbjct: 229 FDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP + ++ GL + +AK++ MIK G + T+N +++ +C++
Sbjct: 547 MASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNC 606
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M++++C + T+ I+I A+ K G DEA L +L+ G P Y
Sbjct: 607 TDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWL 666
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++K +G ++ F ++ G + + L+ + G +A YL ++ E
Sbjct: 667 MMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDE 724
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 35/200 (17%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ GLL G L+ A + ++M+ QG P+ T+N L+ C SG+ +
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ +C+ G DV TY L+ + K G EA ++ ++V+
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK---------------- 304
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
KGH P+ +Y TL+ G V+ L M G P
Sbjct: 305 -------------------KGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPD 345
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
F+++ G D A
Sbjct: 346 HYIFNILIGAYAKHGMVDEA 365
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 84/196 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + ++ G G +E A + +M +G +P + +++++ + ++ +
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y + K G + TY I++ + + D+A R+ HNL + + +I
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDA 635
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D+A F+ + +G PN Y ++ G E + + + + G T
Sbjct: 636 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAD 695
Query: 185 SRCFDLVTDGLKNCGK 200
SR + + L G+
Sbjct: 696 SRMLNALVGKLPQKGE 711
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A +++ M+ G P+ T+N++I CK+G +E ++ + G
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y ++ + + I A L +++ G Y I++G + DDA
Sbjct: 552 VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDAL 611
Query: 136 CFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F + I H NR + +I +GGR EA + + GL P
Sbjct: 612 RMFHNLCLIDFHLQNR-TFNIMIDALLKGGRHDEAKDLFASLLARGLVP 659
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ L G + AK + + M++ D+ T+ +LI+ C G+
Sbjct: 442 MIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGK 501
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G + TY +I K G I++A L + G NP +Y+
Sbjct: 502 VDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYST 561
Query: 121 IIKGAFRRGQFDDA---FCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLME 175
I+ G F+ + A + + + IK P+ T I + G + +A
Sbjct: 562 ILHGLFQTRRIAAAKELYLWMIKCGIK-----LPIGTYNIILQGLCQNNCTDDALRMFHN 616
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +R F+++ D L G+HD A+ +
Sbjct: 617 LCLIDFHLQNRTFNIMIDALLKGGRHDEAKDL 648
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-C 136
AD+ TY I+I S+AG +D AF L ++ G ++P++KG + DA
Sbjct: 94 ADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDI 153
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM----TEMGLTPISRCFDLVT 192
+ G PN Y L+ R +A + L M T G P + V
Sbjct: 154 ALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVI 213
Query: 193 DGLKNCGKHDLA 204
+GL G+ D A
Sbjct: 214 NGLLREGQLDKA 225
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G V +LLV L G A ++V +M +G PD+ T+N LI CK G
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ ++ + G A V TY LI A+SK G + E +L V G P LY
Sbjct: 303 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D AF E++ K P+ Y TL+ GR EA + EMTE G
Sbjct: 363 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 422
Query: 181 LTPISRCFDLVT 192
+ P DLVT
Sbjct: 423 IQP-----DLVT 429
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V L+ L G ++ ++ ++ +++G PDL +N+LI + SG
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + K D TY L+ + G +DEA +L+ + E G P Y
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G DA +E+ KG P Y LI + G+ +A N + EM E G
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492
Query: 181 LTPISRCFDLVTDGL 195
+TP + + +GL
Sbjct: 493 ITPDDSTYISLIEGL 507
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G G ++ A ++ M ++G + T+ +LI + K G+
Sbjct: 278 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G D+ Y LI + S +G ID AF ++ + + P Y
Sbjct: 338 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G G+ D+A E+ +G P+ Y TLI+ G +A EM G
Sbjct: 398 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 457
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL G+ D AE +
Sbjct: 458 FNPTLLTYNALIQGLCKNGQGDDAENM 484
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G + G L++A ++M+++G + T+N L+ + G E+ + G
Sbjct: 223 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 282
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY ILI K G + +A + N+ G Y +I ++GQ +
Sbjct: 283 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 342
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E +G P+ +Y LI G A + EM + + P ++ + GL
Sbjct: 343 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 402
Query: 196 KNCGKHDLAEKI 207
G+ D A K+
Sbjct: 403 CLLGRVDEARKL 414
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ G G ++ A ++ ++M+ +G P+ +N+LI C G+++ + + +
Sbjct: 187 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 246
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V+TY +L+ A+ G EA+ L+ + G P Y +I G + G A
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + +G YT LI + G+ E E G+ P ++ + +
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 366
Query: 195 LKNCGKHDLAEKI 207
G D A +I
Sbjct: 367 HSTSGNIDRAFEI 379
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P + + L+ G G ++ A ++ N+M+ +G +P L T+N+LI+ +CK+G+
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ M + + G D STY LI ++
Sbjct: 478 GDDAENMVKEMVENGITPDDSTYISLIEGLT 508
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGFNP + + L+QGL G + A+ MV +M++ G PD T+ SLIE + E
Sbjct: 453 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 6/151 (3%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TFN ++ +C +G+ +E+ + + + TY +I G + A ++ +
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 171
Query: 107 VEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGG 164
E G P Y +I G + G+ D+A F E+ KG P +Y LI G
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ A Y M E G+ ++L+ L
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHAL 262
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P ++ GL AG + A+++ ++M+ +G PD T+ +LI+ CK+GE
Sbjct: 383 MKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGE 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G +V TY L+ + K G +D A LLH + E G P Y
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A E+ + G P+ YTT++ + G +A L M + G
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F+++ +G G + E++
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERL 589
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++L+ G +G LE ++++ M+ +G P+ TFNSL++ C
Sbjct: 558 MLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNN 617
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+Y + G D +TY ILI KA + EA+ L +VE G + + Y
Sbjct: 618 MRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNS 677
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+IKG ++R +F++A F E++ G + +Y + + G +
Sbjct: 678 LIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNW 723
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++V G L +++ ++ ++G P+ T+NS+I +CK+G
Sbjct: 278 MEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGR 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + D Y LI K+G + ++L + P Y
Sbjct: 338 VVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A FSE+ KG P+ YT LI + G EA + +M E G
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + DGL CG+ D+A ++
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANEL 484
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G +G + ++ ++M ++ PD T+ S+I +C++G+V +++ + G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI KAG + EAF L + +VE G P Y ++ G + G+ D A
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG PN Y LI + G +A + EM G P + + + D
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542
Query: 196 KNCGKHDLAEKIEQLEVSL 214
C ++A+ E L + L
Sbjct: 543 --CKMGEMAKAHELLRIML 559
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG P + ++ L G + A+Q++ M Q PD + +LI KSG
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGN 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + D TY +I + +AG + EA +L ++ G P Y
Sbjct: 373 VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTA 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +AF +++ KG PN YT L+ + G A L EM+E G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
L P ++ + +GL G + A K+ E+++++
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G AG ++ A + N+M+++G P++ T+ +L++ +CK GE
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + + + G +V TY LI + K G I++A +L+ + G P Y
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + G+ A + KG P + L+ G + + M + G
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + F+ + + C ++++ IE
Sbjct: 598 IMPNATTFNSLMK--QYCIRNNMRATIE 623
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V LV GL G ++ A +++++M ++G P++ T+N+LI +CK G
Sbjct: 453 MVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGN 512
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V++ + G D TY ++ A K G + +A LL +++ G P +
Sbjct: 513 IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNV 572
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + KG PN + +L+ C R Y M
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIY-KGMHAQ 631
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P + ++++ G +C ++ E
Sbjct: 632 GVVPDTNTYNILIKG--HCKARNMKE 655
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P V + L+ GL G +E A +++ +M G PD T+ ++++ CK GE
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G + T+ +L+ +GM+++ RL+ +++ G P + +
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K R + + +G P+ Y LI + EA EM E G
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + ++ + G K + A K+
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKL 694
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 3/206 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE-V 61
D G +P V D+ Q L+ AG L A ++ +K++ G +++ N + + S + +
Sbjct: 176 DWGAHPLVF--DVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGI 233
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++ ++G C + +Y I++ + + G + EA LL + G+ P Y+ I
Sbjct: 234 RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G + Q E++ KG PN+ Y ++I+ + GR VEA L M +
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + + G G + K+
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKL 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ L G ++ A ++ +M +G+ PD+ +++ +++ C+ ++ +++ + +
Sbjct: 256 NIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQR 315
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + TY +I + K G + EA ++L + P +Y +I G + G
Sbjct: 316 KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSV 375
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+ F E+K K P+ YT++I + G+ VEA EM GL P + + D
Sbjct: 376 EYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALID 435
Query: 194 GLKNCGK 200
G G+
Sbjct: 436 GYCKAGE 442
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+QG G L AK +V +M+ +G PD+ FN +I +CK G
Sbjct: 452 MIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGR 511
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ +G +V Y L+ G ++ A R+ +V G P +Y
Sbjct: 512 VMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGT 571
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F EI KG P+ +Y ++ + GR V A EMTE G
Sbjct: 572 LVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESG 631
Query: 181 LTPISRCFDLVTDGL 195
+ + +V GL
Sbjct: 632 IAMDRYTYSIVLGGL 646
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + L+ G + G + A ++ KM QG PD+ T NSL+ ++CK G+
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ S+ G D+ +YKI++ + G + + L + ++ DG P ++
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + G D A F+E++ +G P+ Y+T+I R G+ +A +M + G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
+ P + + G C DL
Sbjct: 457 VAPSISTYHFLIQGF--CTHGDL 477
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V ++ L G ++ A + N+MI QG P + T++ LI+ C G+
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D+ + +I + K G + +A + + G +P +Y
Sbjct: 477 LLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNT 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ ++A F + G PN VY TL+ + GR E + E+ G
Sbjct: 537 LMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++++ GL G+
Sbjct: 597 IKPSTTLYNIILHGLFQAGR 616
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG + +++ G G L ++ N M+ G PD FN LI+ K G
Sbjct: 347 MAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G DV TY +I A+ + G +D+A + +++ G P S Y
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A ++ KG P+ + +I + GR ++A N +G
Sbjct: 467 LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIG 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P ++ + DG GK + A ++ + VS
Sbjct: 527 LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVS 559
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 80/200 (40%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ G G + A + N+M+++G PDL T+N ++ +CK+ ++ +
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D TY LI S G EA R+ + G P ++ +
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DA F + +KG + Y ++ G V+ M G+ P S
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
F+++ CG D A I
Sbjct: 394 FNVLIKAYAKCGMLDRATII 413
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 11/216 (5%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V + L+ G G +E+A ++ + M+ G P++ + +L+ CK G ++
Sbjct: 526 GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G + Y I++ + +AG A H + E G Y+ ++ G
Sbjct: 586 LSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG----GRFVEAANYLMEMTEMG 180
F+ D+A F E+ H N + T + + G R EA + ++ G
Sbjct: 646 LFKNSCSDEAILLFKEL----HAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSG 701
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
L P + ++ + N K L E+ + + S+ +
Sbjct: 702 LVPSVVTYSIM---MTNLIKEGLVEEADDMFSSMEN 734
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 29 AKQMVNKMIKQGSD--PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
A +++ M + G+ P+ +N++I+ K G+V +++ + + G D+STY +
Sbjct: 198 ADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCV 257
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ A+ KA +D+A +L +V+ G P Y +I G GQ+ +A ++ +G
Sbjct: 258 VNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGI 317
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
P+ +L+ + G+ +A + M G
Sbjct: 318 LPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKG 351
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 71/180 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V LV G G ++ + +++ +G P +N ++ + ++G
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D TY I++ + K DEA L L +
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ + ++A F+ I G P+ Y+ ++T + G EA + M G
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG 736
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S KG P + L+ G AG +E K++ ++M K+G P++ T N+L+ +C++G V
Sbjct: 411 SQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRV 470
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
V + + G D TY LI A ++A L + +++ G +P +Y +
Sbjct: 471 SSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTL 530
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + G+ DA +E+K G P+ Y TLI R +F L EM E GL
Sbjct: 531 ISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGL 590
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + G A+K+
Sbjct: 591 KPDTITYNTLIAYASKNGDLKFAQKV 616
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG + A ++ ++ K G PD +N+LI C++ + EM + + G
Sbjct: 530 LISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI SK G + A +++ +++ G P + Y +I G ++A
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649
Query: 136 CFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F ++K PPN +Y LI + + A + + +M G+TP + ++ + G
Sbjct: 650 EIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKG 709
Query: 195 LKN 197
L++
Sbjct: 710 LRD 712
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 104/276 (37%), Gaps = 80/276 (28%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK------------------ 57
L+ GL G +++ KM++ P++ TF LI +CK
Sbjct: 311 LLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGK 370
Query: 58 -SGEVEFCVE----MYYS----VCKLG----------------SCA-DVSTYKILIPAVS 91
SG + VE +Y + +CK+G CA D TY LI
Sbjct: 371 ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC 430
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH----- 146
KAG I++ L + ++G P ++ G R G+ A FF E + +G
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490
Query: 147 ------------------------------PPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
P+ VY TLI+ + GR +A+ L E+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550
Query: 177 TEMGLTPISRCFDLVTDGLKNCGK-HDLAEKIEQLE 211
++G+ P + C++ + G K H + E ++++E
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME 586
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G L+ A++++ KMIK G P + T+ ++I C +G
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644
Query: 61 VEFCVEMYYSVCKLGSCADVST--YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
+E++ + K S +T Y ILI ++ K + A L+ ++ G P + Y
Sbjct: 645 GNEAMEIFKDM-KAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTY 703
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
I KG + F F ++ H N P Y T+
Sbjct: 704 NAIFKGLRDEKDLEKVFEFMD--RMIEHACN-PDYITM 738
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 9/178 (5%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +MIK G+ + NSL+ + + G E+ + ++ +V T+ ILI +
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMC 351
Query: 92 KAGMIDEAFRLLHNL--------VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
K +D+A +L + + P +Y +I G + G+ + ++
Sbjct: 352 KFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS 411
Query: 144 -KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
KG P+ Y LI + G + EM + G+ P + + G+ G+
Sbjct: 412 QKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGR 469
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 108/207 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 149 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 208
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G +++TY L+ + G + E LL +V +G +P +++
Sbjct: 209 CTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 268
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + ++A FS+++ +G PN Y +I + + GR +A Y +M + G
Sbjct: 269 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P + ++ + GL C K + AE++
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEEL 355
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P + L+ GL E A++++ +M+ +G + FNS+I++ CK G
Sbjct: 324 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 383
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G D+ TY LI AG +DEA +LL ++V G P Y+
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DA F E++ G P+ Y ++ + R A + +T+ G
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 504 RQLELSTYNIILHGL 518
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEVEFCV 65
P V ++L+ GL + + A ++++ M G D PD+ +++++I K G+++
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
Y + +V TY +I A+ KA +D+A +L +V+ G P Y I+ G
Sbjct: 109 STYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 168
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
GQ +A F +++ G P+ Y +L+ + GR EA MT+ GL P
Sbjct: 169 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 226
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G + P V ++ G G L+ N+M+ Q P++ T+NS+I +CK+
Sbjct: 77 MADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKA 136
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
V+ +E+ ++ K G D TY ++ +G EA L + DG P Y
Sbjct: 137 QTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 196
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ +A F + +G P Y TL+ G VE L M
Sbjct: 197 NSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 256
Query: 179 MGLTPISRCFDLVT 192
G+ P F ++
Sbjct: 257 NGIHPNHYVFSILV 270
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A +MI +G P +NSLI +C +
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + G C + + +I + K G + E+ +L +V G P Y+
Sbjct: 349 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + + G P+ Y+TLI + R +A EM G
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 469 VSPDIITYNIILQGL 483
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G P+ F+ L+ K +
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++ + + G + TY +I + K+G +++A ++++G +P +Y
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +++ A E+ +G N + ++I + GR +E+ M +G
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 398
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + + DG GK D A K+ VS+
Sbjct: 399 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 432
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 3/210 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G AG ++ A +++ M+ G PD T+++LI CK ++
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D+ TY I++ + + A L + + G S Y I+ G
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ DDA F + + + +I + GR EA + + + GL P
Sbjct: 518 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ L+ + + G L E+++QL +S+
Sbjct: 578 YWTYRLMAENIIGQG---LLEELDQLFLSM 604
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL +AK++ + K G +L T+N ++ +CK+
Sbjct: 464 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKL 523
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + + T+ I+I A+ K G DEA L +G P Y
Sbjct: 524 TDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 583
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G + + ++ + G A YL + E
Sbjct: 584 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 641
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 77/200 (38%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G ++ A + +M G PD+ T+N +++ + ++
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y + K G ++STY I++ + K + D+A R+ NL +
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F G PN Y + G E + M + G
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608
Query: 181 LTPISRCFDLVTDGLKNCGK 200
T S + + L G+
Sbjct: 609 CTVDSGMLNFIVRELLQRGE 628
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G L+QGL AG + A+++ +M+ G P++ T+N+L++ +CK+G+
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + + + TY I+I + KAG +++ + L NL G P Y
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G ++A F E+K G PN Y TLI R G +A + EM G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 181 LTPISRCFDLVTDGLKN 197
+ LVT+ L +
Sbjct: 602 FAGDASTIGLVTNMLHD 618
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + L+ G ++ + A +V++M G P+ TFN+LI + +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D+ TY +++ + K G D AF LL+ + + P +Y
Sbjct: 202 ASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTT 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA F E++ KG PN Y++LI+ GR+ +A+ L +M E
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + D GK AEK+
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKL 348
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V L+ + G L A+++ ++M+K+ DP + T++SLI C
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+ + DV +Y LI KA +DE L + + G Y
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F+ G D A F E+ G PPN Y TL+ + G+ +A +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++ +G+ GK
Sbjct: 497 MEPTIYTYNIMIEGMCKAGK 516
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 36/247 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + L+ G L+ AKQM M+ + PD+ ++++LI+ CK+
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF------ 114
V+ +E++ + + G + TY LI + +AG D A + +V DG P
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 115 ---------------------------PSLYA--PIIKGAFRRGQFDDAFCFFSEIKIKG 145
P++Y +I+G + G+ +D + F + +KG
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD-LVTDGLKNCGKHDLA 204
P+ Y T+I+ R G EA EM E G P S C++ L+ L++ + A
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 205 EKIEQLE 211
E I+++
Sbjct: 592 ELIKEMR 598
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ L N G A ++++ MI++ +PD+ TF++LI+ K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + K + TY LI +DEA ++ +V P Y+
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + D+ F E+ +G N YTTLI + G A EM G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++ + DGL GK + A
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V ++ GL +++ A + +M +G P++ T++SLI +C G
Sbjct: 247 MEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV T+ LI A K G + EA +L +V+ +P Y+
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F + K P+ Y+TLI + R E EM++ G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L + + + GL G D+A++I + VS
Sbjct: 427 LVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS 459
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 4/201 (1%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L + L+ L+ A + +M+K P + F+ L+ I K + + + + +
Sbjct: 49 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 108
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
LG + TY ILI + + A +L +++ G+ P + ++ G +
Sbjct: 109 NLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A ++ + G+ PN + TLI + EA + M G P + +V
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVV 228
Query: 193 DGLKNCGKHDLA----EKIEQ 209
+GL G DLA K+EQ
Sbjct: 229 NGLCKRGDTDLAFILLNKMEQ 249
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 5/169 (2%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T++ LI C+ ++ + + + KLG ++ T L+ + I EA L+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGR 165
G+ P + +I G F + +A + KG P+ Y ++ +C RG
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD- 236
Query: 166 FVEAANYLMEMTEMG-LTPISRCFDLVTDGL-KNCGKHDLAEKIEQLEV 212
+ A L+ E G L P + + DGL KN D +++E
Sbjct: 237 -TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMET 284
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+QGL AG + A+++ KM+ G PD+ T++ L++ +CK G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + K D+ TY I+I + KAG +++ + L +L G P +Y
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G ++A F E+K G P+ Y TLI R G +A + EM G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 181 L----TPISRCFDLVTDG 194
+ IS +++ DG
Sbjct: 601 FVGDASTISMVINMLHDG 618
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + L+ G ++ + A +V++M++ G PD TFN+LI + +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G D+ TY ++ + K G ID A LL + + +Y
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDAF F++++ KG P+ Y +LI+ GR+ +A+ L M E
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + D GK AEK+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKL 347
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L++G A +E ++ +M ++G + T+N+LI+ + ++G+ + ++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ TY IL+ + K G +++A + L + P Y +I+G +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +D + F + +KG PN +YTT+I+ R G EA EM E G P S C
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 572
Query: 188 FD-LVTDGLKNCGKHDLAEKIEQLE 211
++ L+ L++ K AE I+++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMR 597
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P + L+ GL A +V++M+++G PDL T+ +++ +CK G+
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + K ADV Y +I + K ID+AF L + + G P Y
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G++ DA S + + PN ++ LI + G+ VEA EM +
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ P + + +G + D A+ + +L +S
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL +++ A + NKM +G PD+ T+NSLI +C G + ++ +
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T+ LI A K G + EA +L +++ +P Y+ +I G + D+A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + K PN Y TLI + R E EM++ GL + ++ + GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 196 KNCGKHDLAEKIEQLEVS 213
G D+A+KI + VS
Sbjct: 441 FQAGDCDMAQKIFKKMVS 458
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ L N G A ++++ MI++ +P++ TF++LI+ K G+
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + K D+ TY LI +DEA + ++ P Y
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + ++ F E+ +G N Y TLI + G A +M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ DGL GK + A
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKA 484
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 1/187 (0%)
Query: 18 QGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC 77
LLN L+ A + +M++ P + FN L+ I K + + + + + L
Sbjct: 54 NALLNLK-LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRIS 112
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
D+ +Y ILI + + A +L +++ G+ P + ++ G + DA
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 172
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
++ G+ P+ + TLI + EA + +M + G P + V +GL
Sbjct: 173 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCK 232
Query: 198 CGKHDLA 204
G DLA
Sbjct: 233 RGDIDLA 239
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
DL ++N LI C+ ++ + + + KLG D+ T L+ + I +A L+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 173
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGR 162
+VE G+ P + +I G F + +A ++ +G P+ Y ++ +C R
Sbjct: 174 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233
Query: 163 GGRFVEAANYLMEMTEMG-LTPISRCFDLVTDGL 195
G ++ A L++ E G + ++ + DGL
Sbjct: 234 GD--IDLALSLLKKMEKGKIEADVVIYNTIIDGL 265
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + + L+ LL Y E A + M G PD TFN L+ KSG++
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y + D TY I+I +++K+ +D+A ++LV P P Y P+I G
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ ++A F E+ G PN ++ LI G+ G A M G+ P
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + ++ D L G+ D A
Sbjct: 963 LKSYTILVDCLCLAGRVDEA 982
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V + ++ L AG ++ A ++ +M +G PDL T+ LI+ +C +G+
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G D Y L+ + G +D + DG+ P +
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + FD+AF F ++ +G PN Y TLI R GR +A L M +G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + +++ D G+
Sbjct: 433 VQPTAYTYNIFIDYFGKSGE 452
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF + L+ L+ +G+ A ++ +M+ +G P L+T+++L+ + K +
Sbjct: 183 MRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD 242
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + LG +V T+ I I + +AG IDEA+ + + ++G P Y
Sbjct: 243 SEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTV 302
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I GQ ++A F ++K GH P++ +Y TL+ G + +M G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P F ++ D L C D E +V
Sbjct: 363 YMPDVVTFTILVDVL--CKARDFDEAFATFDV 392
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + +L+ L NAG LE+AK++ KM G PD + +L++ G+
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + G DV T+ IL+ + KA DEAF + + G P Y
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ +DA ++ G P Y I G+ G +A +M G
Sbjct: 408 LICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKG 467
Query: 181 LTP 183
+ P
Sbjct: 468 IVP 470
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GLL AG +E A +++ M G P T+N I+ KSGE
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452
Query: 61 VEFCVEMY-------------------YSVCKLGS----------------CADVSTYKI 85
VE + YS+ ++G D TY +
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ SK G +DEA LL ++ +G P + +I ++ G+ D+A+ F +K
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P Y TL++ G+ GR +A M E +P + F+ + D + +LA
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELAL 632
Query: 206 KI 207
K+
Sbjct: 633 KM 634
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P R L+ GL G LE A ++ +M G P+ FN LI K G+ E
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+++ + G D+ +Y IL+ + AG +DEA + L G +P Y II G
Sbjct: 949 QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + ++A ++E++ +G P+ Y +L+ G G +A E+ GL P
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++L+ +G + ++ +MI + PD T+N +I ++ KS
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ +Y + TY LI ++K G ++EA RL + + G P +++
Sbjct: 874 LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A F + +G P+ YT L+ GR EA Y E+ G
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
L P ++ + +GL GK E+ L +R+
Sbjct: 994 LDPDFIAYNRIINGL---GKSQRMEEALALYNEMRN 1026
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L+ L E ++ +M G P++ TF I + ++G+
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G D+ TY +LI A+ AG ++ A L + +GH P +Y
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G D F+S+++ G+ P+ +T L+ + + F EA M + G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + GL G+ + A K+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKL 424
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + + L G L AK M N + + G PD T+N +++ K G+
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + + G DV LI ++ KAG +DEA+++ + + +P Y
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ A F + K PN + TL+ + A +MT M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 643 CKPDVLTYNTVIYGL 657
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P ++ +LV L AG ++ A N++ G DPD +N +I + KS
Sbjct: 954 MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y + G D+ TY L+ + AGM+++A R+ L G P Y
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G + A+ + + + G PN Y L
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 37/211 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G P +++++ G ++ A ++++MI+ G +PD+ NSLI+++ K+G
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPS 116
V+ +M+ + + V TY L+ + K G + +A L +++E +P F +
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617
Query: 117 L-------------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L Y +I G + + + AF FF ++K
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSM 677
Query: 146 HPPNRPVYTTL--ITMCGRGGRFVEAANYLM 174
HP + + T L + CG+ G + A M
Sbjct: 678 HPDHVTICTLLPGLVKCGQIGDAISIARDFM 708
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++++ L + L+ A ++ P T+ LI+ + K G +E + +
Sbjct: 856 PDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRL 915
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G + + + ILI K G + A +L +V +G P Y ++
Sbjct: 916 FEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCL 975
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A +F+E+K G P+ Y +I G+ R EA EM G+ P
Sbjct: 976 AGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYT 1035
Query: 188 FDLVTDGLKNCGKHDLAEKI-EQLEVS 213
++ + L G + A+++ E+L+++
Sbjct: 1036 YNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 1/177 (0%)
Query: 29 AKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
A Q+ +K K+ G P L ++N LI + + E +++ + +G D T+ +L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
K+G I E F L ++ P Y +I + D A FF ++
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P Y LI + GR EA EM++ G P F+++ +G G + A
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
M K+I++ DL+T+ ++ + + G + + + K G + +Y LI +
Sbjct: 148 MQKKIIRR----DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
++G EA + +V +G P Y+ ++ ++ + E++ G PN
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+T I + GR G+ EA M + G P + ++ D L N G+ + A+++
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319
>gi|341605697|gb|AEK82951.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 103 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 162
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 163 LIDALTKHGKVDEAMMLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + + L+ LL Y E A + M G PD TFN L+ KSG++
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y + D TY I+I +++K+ +D+A ++LV P P Y P+I G
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ ++A F E+ G PN ++ LI G+ G A M G+ P
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + ++ D L G+ D A
Sbjct: 963 LKSYTILVDCLCLAGRVDEA 982
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + +L+ L NAG LE+AK++ KM G PD + +L++ G+
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + G DV T+ IL+ + KA DEAF + + G P Y
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ +DA ++ G P Y T I G+ G +A +M G
Sbjct: 408 LICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKG 467
Query: 181 LTP 183
+ P
Sbjct: 468 IVP 470
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF + L+ L+ +G+ A ++ +M+ +G P L+T+++L+ + K +
Sbjct: 183 MRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD 242
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + LG +V T+ I I + +AG IDEA+ + + ++G P Y
Sbjct: 243 SEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTV 302
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I GQ ++A F ++K GH P++ +Y TL+ G + +M G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P F ++ D L C D E +V
Sbjct: 363 YMPDVVTFTILVDVL--CKARDFDEAFATFDV 392
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V + ++ L AG ++ A ++ +M +G PDL T+ LI+ +C +G+
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G D Y L+ + G +D + DG+ P +
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + FD+AF F ++ +G PN Y TLI R GR +A L M +G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + + D G+
Sbjct: 433 VQPTAYTYITFIDYFGKSGE 452
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P R L+ GL G LE A ++ +M G P+ FN LI K G+ E
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+++ + G D+ +Y IL+ + AG +DEA + L G +P Y II G
Sbjct: 949 QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + ++A ++E++ +G P+ Y +L+ G G +A E+ GL P
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GLL AG +E A ++++ M G P T+ + I+ KSGE
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + G ++ + ++++ G + EA + + L E+G P Y
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K + GQ D+A SE+ G P+ V +LI + GR EA M +M
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L+P ++ + GL G+
Sbjct: 573 LSPTVVTYNTLLSGLGKEGR 592
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++L+ +G + ++ +MI + PD T+N +I ++ KS
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ +Y + TY LI ++K G ++EA RL + + G P +++
Sbjct: 874 LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A F + +G P+ YT L+ GR EA Y E+ G
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
L P ++ + +GL GK E+ L +R+
Sbjct: 994 LDPDFIAYNRIINGL---GKSQRMEEALALYNEMRN 1026
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + + L G L AK M N + + G PD T+N +++ K G+
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + + G DV LI ++ KAG +DEA+++ + + +P Y
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ A F + K PN + TL+ + A +MT M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 643 CKPDVLTYNTVIYGL 657
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L+ L E ++ +M G P++ TF I + ++G+
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G D+ TY +LI A+ AG ++ A L + +GH P +Y
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G D F+S+++ G+ P+ +T L+ + + F EA M + G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + GL G+ + A K+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKL 424
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P ++ +LV L AG ++ A N++ G DPD +N +I + KS
Sbjct: 954 MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y + G D+ TY L+ + AGM+++A R+ L G P Y
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G + A+ + + + G PN Y L
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ L AG ++ A QM ++M P + T+N+L+ + K G
Sbjct: 533 MIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGR 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ S+ + ++ L+ K ++ A ++ + P Y
Sbjct: 593 VQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNT 652
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL--ITMCGRGGRFVEAANYLM 174
+I G + + + AF FF ++K HP + + T L + CG+ G + A M
Sbjct: 653 VIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFM 708
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++++ L + L+ A ++ P T+ LI+ + K G +E + +
Sbjct: 856 PDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRL 915
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G + + + ILI K G + A +L +V +G P Y ++
Sbjct: 916 FEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCL 975
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A +F+E+K G P+ Y +I G+ R EA EM G+ P
Sbjct: 976 AGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYT 1035
Query: 188 FDLVTDGLKNCGKHDLAEKI-EQLEVS 213
++ + L G + A+++ E+L+++
Sbjct: 1036 YNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 1/177 (0%)
Query: 29 AKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
A Q+ +K K+ G P L ++N LI + + E +++ + +G D T+ +L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
K+G I E F L ++ P Y +I + D A FF ++
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P Y LI + GR EA EM++ G P F+++ +G G + A
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
M K+I++ DL+T+ ++ + + G + + + K G + +Y LI +
Sbjct: 148 MQKKIIRR----DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
++G EA + +V +G P Y+ ++ ++ + E++ G PN
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+T I + GR G+ EA M + G P + ++ D L N G+ + A+++
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P R ++L++ ++ L A + NKM KQG PD+ET++ L++ +C+ +V+
Sbjct: 233 GISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTA 292
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G D TY L+ ++ + + EA+RLL + G NP Y +I G
Sbjct: 293 LGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITG 352
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ DA ++ G PN Y TL+ G+F EA +++ EM G P
Sbjct: 353 FCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPH 412
Query: 185 SRCFDLVTDGLKNCGK 200
+ L+ GL N GK
Sbjct: 413 ISIYHLLITGLCNEGK 428
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P + ++L+ L+ LE+A + K+ + G P+ T+N LI C S +
Sbjct: 194 MLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDK 253
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G DV TY IL+ + + + A +L ++ G+ P Y
Sbjct: 254 LSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNT 313
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R+ +A+ S++K+ G P+ Y T+IT R GR ++A L +M E G
Sbjct: 314 LLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENG 373
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P + + + +GL N GK D A+
Sbjct: 374 CLPNALSYRTLVNGLCNEGKFDEAK 398
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V +L+QGL +++A ++++M+ +G PD T+N+L+ ++C+
Sbjct: 264 MHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMN 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G DV Y +I + G +A ++L ++ E+G P Y
Sbjct: 324 LREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRT 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+FD+A F E+ G P+ +Y LIT G+ EA L+ MT+
Sbjct: 384 LVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQT 443
Query: 181 LTP 183
L P
Sbjct: 444 LAP 446
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
G A + ++M++ G +P + FN L+ + + +E + ++ + + G + T
Sbjct: 181 VGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRT 240
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y ILI A + + A+ L + + + G P Y+ +++G R+ Q A E+
Sbjct: 241 YNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEML 300
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
KG+ P+ Y TL+ R EA L +M MG P ++ V G G+
Sbjct: 301 NKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGR 358
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P LV GL N G + AK V +MI G P + ++ LI +C G+
Sbjct: 369 MPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGK 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
V E+ + K ST+ +L+ + + EA L+ L ED
Sbjct: 429 VGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQT-EARELVDKLSED 476
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 82/206 (39%), Gaps = 2/206 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF L+ L A ++ + ++ +M K G F +IE + G
Sbjct: 128 GFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEA 187
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ ++ + + G + +L+ + + ++ A L L E G +P Y +I+
Sbjct: 188 IKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRA 247
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ A+ F+++ +G P+ Y+ L+ R + A L EM G P
Sbjct: 248 HCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPD 307
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ ++ + + L C K +L E L
Sbjct: 308 ALTYNTLLNSL--CRKMNLREAYRLL 331
>gi|341605703|gb|AEK82954.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605705|gb|AEK82955.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605709|gb|AEK82957.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605813|gb|AEK83009.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605815|gb|AEK83010.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605817|gb|AEK83011.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605819|gb|AEK83012.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 103 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 162
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 163 LIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + ++L+ L G + AK+++ MI+ G PDL T+NSLIE C G+
Sbjct: 276 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 335
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ S+ G DV +Y +LI SK ++EA +L + ++ G P Y
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 395
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG F G+ DDA FS +K G N Y + + EA E+
Sbjct: 396 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 455
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + DGL GK + A ++
Sbjct: 456 FKLEIENLNCLIDGLCKAGKLETAWEL 482
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++V GL G + AKQ+ +M QG P + ++NSLI C +G+ E +
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D+ T+ +LI + K G + EA +LL ++E G P Y +I+G
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 332
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G + A F + KG P+ Y LI + + EA EM +G P
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+D + G+ GK D A+K+
Sbjct: 393 YDSLLKGIFLAGKVDDAKKL 412
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ L N L ++++G P++ T+N+LI+ +C + ++ + K
Sbjct: 108 NILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQK 167
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED------GHNPFPSLYAPIIKGAFR 127
LG DV TY LI + G I+ A +L ++ D P Y I+ G +
Sbjct: 168 LGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCK 227
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A F E+K +G P+ Y +LI G++ E+ L EM + GL P
Sbjct: 228 VGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVT 287
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
F+++ D L GK A+K+
Sbjct: 288 FNVLIDTLCKEGKVIEAKKL 307
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G++P + + L++GL + A ++ +M K G PD+ T+ +LI+ +C +G +
Sbjct: 133 RGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINI 192
Query: 64 CVEMY------YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++++ S ++ +V TY I++ + K G DEA +L + G P
Sbjct: 193 ALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIIS 252
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G G+++++ E+ +G P+ + LI + G+ +EA L M
Sbjct: 253 YNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 312
Query: 178 EMGLTPISRCFDLVT 192
E G+ P DLVT
Sbjct: 313 ESGIVP-----DLVT 322
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V D L++G+ AG ++ AK++ + M G + T+ ++ +CK+ +
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + ++ LI + KAG ++ A+ L L +GH P Y +I G
Sbjct: 445 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R GQ D A +++ G P+ Y TL+ + E L M + ++P
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564
Query: 185 SRCFDLVTDGL 195
+ +V D L
Sbjct: 565 AITCSIVVDML 575
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 72/159 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+ + GL L A ++ ++ ++E N LI+ +CK+G++E E++ +
Sbjct: 430 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 489
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY I+I + G +D+A L+ + +G P Y +++G + + ++
Sbjct: 490 GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEV 549
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+ K P+ + ++ M + ++ E + L
Sbjct: 550 VQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ F + + L+ GL AG LE+A ++ K+ +G +P++ T+ +I C+ G+
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V+ + + G D+ TY L+ ++ ++E +LLH + + +P
Sbjct: 511 VDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 563
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M++ P L +FN L+ + K +Y + G +D T IL+ +
Sbjct: 60 MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+ E F ++ G++P Y +IKG + +A F ++ G P+ Y T
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
Query: 156 LIT-MCGRGGRFVEAANYLMEMTEMGLTPISR----------CFDLVTDGLKNCGKHDLA 204
LI +CG G N +++ + L ISR ++++ DGL G+ D A
Sbjct: 180 LIKGLCGTGN-----INIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEA 234
Query: 205 EKI 207
+++
Sbjct: 235 KQL 237
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S++G P V +++ G G ++ A ++ KM G PD+ T+N+L+ +S +
Sbjct: 486 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 545
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
+E V++ + + + D T I++ +SK E LL
Sbjct: 546 LEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588
>gi|399107214|gb|AFP20371.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 92/177 (51%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 178
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 187
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 105 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 164
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 165 LIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 207
>gi|341606827|gb|AEK83516.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 207
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
Y++LI G+ GR EA EM+E G T S C++ + D L GK
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGK 169
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 100 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 158
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ ++A F ++ + ++ VYT I + G
Sbjct: 159 ALIDALTKHGKVNEAMTLFKRME-EEEGCDQTVYTYTILISG 199
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 182
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 135
Query: 202 DLAEKI 207
D AE++
Sbjct: 136 DEAERL 141
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 2/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P VR +++ L L++A ++N+M ++ P++ T+NSLI+ +CK G+
Sbjct: 194 MEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQ 253
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + L +V T+ ILI + K G +++A ++ +++E G P Y+
Sbjct: 254 WEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSA 313
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G RGQ D A F+ ++ KG PN Y+ LI + +A E+++ G
Sbjct: 314 IMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKG 373
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEV 212
L P + + + GL G+ A+KI E L V
Sbjct: 374 LKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV 407
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + + L+ GL G E K ++++M+ +P++ TF+ LI+ +CK G+
Sbjct: 229 MKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGK 288
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + + G D+ TY ++ G +D A R+ + L + G P Y+
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ A F EI KG P+ Y+T++ GR +A EM +G
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408
Query: 181 LTP 183
TP
Sbjct: 409 PTP 411
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 102/237 (43%), Gaps = 35/237 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + NP V +L+ GL G +E A +++ MI++G +PD+ T++++++ C G+
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQ 323
Query: 61 VEFCVEMY--------------YSVCKLGSCA---------------------DVSTYKI 85
V+ ++ YS+ G C D TY
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ + + G I +A ++ ++ G P L++ ++ G F+ G ++A FS+++
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
N YT +I + R EA ++ +GL P R ++++ G G D
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFD 500
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ DKG P + +L+ G L A Q+ ++ ++G PD T+++++ + + G
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + ++G D+ + L+ K G+++EA L L + + S Y
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTV 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A F ++ G P+ Y +IT R G F E L +M + G
Sbjct: 454 VINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ ++++ G K
Sbjct: 514 CPANNITYNVIMQGFFRSNK 533
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P ++ GL+ G + AK++ ++M++ G PD+ ++L+ K G
Sbjct: 369 ISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGL 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++ + + ++S Y ++I + K + EA + L G P Y
Sbjct: 429 VEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G FD+ +++ G P N Y ++ R + E +++ EM G
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548
Query: 181 LTPISRCFDLVTDGL 195
+ FD T G+
Sbjct: 549 FS-----FDATTTGV 558
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+ L+ GL + A + K++++ +P+ + +++ + K G E + + +
Sbjct: 136 NTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIME 195
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ + DV TY I+I A+ K +D A LL+ + + P Y +I G + GQ++
Sbjct: 196 QGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWE 255
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
SE+ PN ++ LI + G+ +A + M E G+ P + +
Sbjct: 256 KVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIM 315
Query: 193 DGLKNCGKHDLAEKI 207
DG G+ D A ++
Sbjct: 316 DGYCLRGQVDRARRV 330
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + + L+ G NAG +E A ++ M P++ T+ LI +CKSG+VE
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G +V TY LI G + AFRLLH + +G P ++ +I
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEMGLTP 183
+R + ++A F + KG N VYT+LI + G+ ++AA+ LM+ M G P
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK-IDAADELMQKMISEGFVP 385
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ + + DGL C + L++ LE
Sbjct: 386 DAHSYSSLIDGL--CRQKKLSQATLMLE 411
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL AG E A+ ++ + + G +P++ +N+LI+ C +GE+E ++++ +
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY LI + K+G ++ A L +VE G P Y +I+G G AF
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PN ++ LI + + EA +L + + G+ + + DGL
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362
Query: 196 KNCGKHDLAEKIEQLEVS 213
GK D A+++ Q +S
Sbjct: 363 CKTGKIDAADELMQKMIS 380
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P VR L+ GL +G +E A + ++M++ G +P++ T+ +LI+ C G ++
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR 303
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + G + T+ +LI A+ K ++EA L +LV+ G +Y +I G
Sbjct: 304 LLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC 363
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ D A ++ +G P+ Y++LI R + +A L +M E G+
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423
Query: 187 CFDLVTDGL 195
+ ++ D L
Sbjct: 424 TYTIIIDEL 432
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V L+QG N G+L+ A ++++ M G P+ TF+ LI+ +CK +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE S+ K G + Y LI + K G ID A L+ ++ +G P Y+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G R+ + A ++ KG + YT +I
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 12/205 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +++ L+ E K++ +KMI G +PD+ T+ + + C+ G
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E M + G ++ TY LI + G++ +AF +V G P Y
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532
Query: 121 IIKGAFRRGQFDDAF------------CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
+++ ++ D++ +I + P +Y+ I R R E
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEE 592
Query: 169 AANYLMEMTEMGLTPISRCFDLVTD 193
A ++ M M LTP + + D
Sbjct: 593 AKHFFMGMQNANLTPSEDVYTSIID 617
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ L +E A+ + ++K+G + + SLI+ +CK+G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D +Y LI + + + +A +L +++E G P Y
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II R + F ++ G P+ YT + GR +A + +++M + G
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P ++ + G N G
Sbjct: 488 VFPNLVTYNTLIRGYANLG 506
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +++A +++ KMI +G PD +++SLI+ +C+ ++ M + + G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A TY I+I + + + ++ ++ G NP Y ++ G+ +DA
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +G PN Y TLI G +A + M G P
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 12/219 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + + V+ G +E A+ M+ +M+ +G P+L T+N+LI G
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL--------LHNLVED-GH 111
V + + G + +Y +L+ V K D + + L L+ED
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITE 567
Query: 112 NPFP---SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
P +Y+ I+ R + ++A FF ++ P+ VYT++I C R +
Sbjct: 568 RQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTD 627
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
A L MT+ G P + ++ L G A+++
Sbjct: 628 ALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV 666
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P L+ GL L A M+ M+++G T+ +I+ + +
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + G D+ TY + + + + G +++A ++ +V+ G P Y
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+I+G G AF F + KG PN YT L+ +
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
+R L+ AG + +AKQ + ++ G PD + S + C++G + ++
Sbjct: 72 LRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFV 131
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ G TY L+ + AGM+ EA + + D P +YA ++ G G
Sbjct: 132 LMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAG 191
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A E G PN VY LI G A M +P R +
Sbjct: 192 RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYT 251
Query: 190 LVTDGLKNCGKHDLA 204
+ GL GK + A
Sbjct: 252 ELIHGLCKSGKVERA 266
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 4/200 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+R + L+ L + + ++M + +L T+ +LI C +G++ +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G D Y + +AGM+ A R+ + G Y ++ G
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F ++ P+ VY T++ GR EA L E G P
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + DG N G+ + A K+
Sbjct: 215 YNALIDGYCNAGEMEHALKV 234
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A +++ M K G P LE++ +I ++C+ G E++ + S D +KI
Sbjct: 625 LTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKI 684
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
LI + + G + E LL + E G+ P ++ A I
Sbjct: 685 LIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMI 720
>gi|341606823|gb|AEK83514.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
Y++LI G+ GR EA EM+E G T S C++ + D L GK
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGK 169
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 182
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 100 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 158
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ ++A F ++ + ++ VYT I + G
Sbjct: 159 ALIDALTKHGKVNEAMTLFKRME-EEEGCDQTVYTYTILISG 199
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 135
Query: 202 DLAEKI 207
D AE++
Sbjct: 136 DEAERL 141
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + ++L+ L G + AK+++ MI+ G PDL T+NSLIE C G+
Sbjct: 251 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ S+ G DV +Y +LI SK ++EA +L + ++ G P Y
Sbjct: 311 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG F G+ DDA FS +K G N Y + + EA E+
Sbjct: 371 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + DGL GK + A ++
Sbjct: 431 FKLEIENLNCLIDGLCKAGKLETAWEL 457
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 21/195 (10%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ L N L ++++G P++ T+N+LI+ +C + ++ + K
Sbjct: 108 NILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQK 167
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED------GHNPFPSLYAPIIKGAFR 127
LG DV TY LI + G I+ A +L ++ D P Y I+ G +
Sbjct: 168 LGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCK 227
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPV----------YTTLITMCGRGGRFVEAANYLMEMT 177
G+ D+A F E+K +G PN + + LI + G+ +EA L M
Sbjct: 228 VGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 287
Query: 178 EMGLTPISRCFDLVT 192
E G+ P DLVT
Sbjct: 288 ESGIVP-----DLVT 297
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V D L++G+ AG ++ AK++ + M G + T+ ++ +CK+ +
Sbjct: 360 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 419
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + ++ LI + KAG ++ A+ L L +GH P Y +I G
Sbjct: 420 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 479
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R GQ D A +++ G P+ Y TL+ + E L M + ++P
Sbjct: 480 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 539
Query: 185 SRCFDLVTDGL 195
+ +V D L
Sbjct: 540 AITCSIVVDML 550
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 72/159 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+ + GL L A ++ ++ ++E N LI+ +CK+G++E E++ +
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY I+I + G +D+A L+ + +G P Y +++G + + ++
Sbjct: 465 GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEV 524
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+ K P+ + ++ M + ++ E + L
Sbjct: 525 VQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ F + + L+ GL AG LE+A ++ K+ +G +P++ T+ +I C+ G+
Sbjct: 426 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V+ + + G D+ TY L+ ++ ++E +LLH + + +P
Sbjct: 486 VDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 538
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M++ P L +FN L+ + K +Y + G +D T IL+ +
Sbjct: 60 MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+ E F ++ G++P Y +IKG + +A F ++ G P+ Y T
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
Query: 156 LIT-MCGRGGRFVEAANYLMEMTEMGLTPISR----------CFDLVTDGLKNCGKHDLA 204
LI +CG G N +++ + L ISR ++++ DGL G+ D A
Sbjct: 180 LIKGLCGTGN-----INIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEA 234
Query: 205 EKI 207
+++
Sbjct: 235 KQL 237
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S++G P V +++ G G ++ A ++ KM G PD+ T+N+L+ +S +
Sbjct: 461 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
+E V++ + + + D T I++ +SK E LL
Sbjct: 521 LEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Query: 56 CKSGEVE--FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
CK+G V + ++ + + +S++ L+ ++K + F L + + G +
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 114 FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
++ + + F F+ I +G+ PN Y TLI R EA
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 174 MEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ M ++G TP + + GL G ++A K+ Q
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQ 198
>gi|341605707|gb|AEK82956.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F G N
Sbjct: 64 KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 103 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 162
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +DEA L + E+G + Y +I G F+
Sbjct: 163 LIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + + L+ G NAG +E A ++ M P++ T+ LI +CKSG+VE
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G +V TY LI G + AFRLLH + +G P ++ +I
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEMGLTP 183
+R + ++A F + KG N VYT+LI + G+ ++AA+ LM+ M G P
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK-IDAADELMQKMISEGFVP 385
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ + + DGL C + L++ LE
Sbjct: 386 DAHSYSSLIDGL--CRQKKLSQATLMLE 411
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL AG E A+ ++ + + G +P++ +N+LI+ C +GE+E ++++ +
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY LI + K+G ++ A L +VE G P Y +I+G G AF
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PN ++ LI + + EA +L + + G+ + + DGL
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362
Query: 196 KNCGKHDLAEKIEQLEVS 213
GK D A+++ Q +S
Sbjct: 363 CKTGKIDAADELMQKMIS 380
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P VR L+ GL +G +E A + ++M++ G +P++ T+ +LI+ C G ++
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR 303
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + G + T+ +LI A+ K ++EA L +LV+ G +Y +I G
Sbjct: 304 LLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC 363
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ D A ++ +G P+ Y++LI R + +A L +M E G+
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423
Query: 187 CFDLVTDGL 195
+ ++ D L
Sbjct: 424 TYTIIIDEL 432
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V L+QG N G+L+ A ++++ M G P+ TF+ LI+ +CK +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE S+ K G + Y LI + K G ID A L+ ++ +G P Y+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G R+ + A ++ KG + YT +I
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ L +E A+ + ++K+G + + SLI+ +CK+G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D +Y LI + + + +A +L +++E G P Y
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II R + F ++ G P+ YT + GR +A + +++M + G
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P ++ + G N G
Sbjct: 488 VFPNLVTYNTLIRGYANLG 506
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +++A +++ KMI +G PD +++SLI+ +C+ ++ M + + G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A TY I+I + + + ++ ++ G NP Y ++ G+ +DA
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +G PN Y TLI G +A + M G P
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 82/195 (42%), Gaps = 3/195 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +++ L+ E K++ +KMI G +PD+ T+ + + C+ G
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E M + G ++ TY LI + G++ +AF +V G P Y
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP---NRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+++ ++ D++ + +K + V+ LI + G E ++ L M
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMK 592
Query: 178 EMGLTPISRCFDLVT 192
E G P + ++T
Sbjct: 593 EHGYQPSNTINAMIT 607
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P L+ GL L A M+ M+++G T+ +I+ + +
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + G D+ TY + + + + G +++A ++ +V+ G P Y
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+I+G G AF F + KG PN YT L+ +
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
+R L+ AG + +AKQ + ++ G PD + S + C++G + ++
Sbjct: 72 LRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFV 131
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ G TY L+ + AGM+ EA + + D P +YA ++ G G
Sbjct: 132 LMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAG 191
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A E G PN VY LI G A M +P R +
Sbjct: 192 RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYT 251
Query: 190 LVTDGLKNCGKHDLA 204
+ GL GK + A
Sbjct: 252 ELIHGLCKSGKVERA 266
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 4/200 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+R + L+ L + + ++M + +L T+ +LI C +G++ +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G D Y + +AGM+ A R+ + G Y ++ G
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F ++ P+ VY T++ GR EA L E G P
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + DG N G+ + A K+
Sbjct: 215 YNALIDGYCNAGEMEHALKV 234
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
GF P + + L+ G NAG +E A ++ M P++ T+ LI +CKSG+VE
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ + + G +V TY LI G + AFRLLH + +G P ++ +I
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEMGLT 182
+R + ++A F + KG N VYT+LI + G+ ++AA+ LM+ M G
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK-IDAADELMQKMISEGFV 384
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P + + + DGL C + L++ LE
Sbjct: 385 PDAHSYSSLIDGL--CRQKKLSQATLMLE 411
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL AG E A+ ++ + + G +P++ +N+LI+ C +GE+E ++++ +
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY LI + K+G ++ A L +VE G P Y +I+G G AF
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PN ++ LI + + EA +L + + G+ + + DGL
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362
Query: 196 KNCGKHDLAEKIEQLEVS 213
GK D A+++ Q +S
Sbjct: 363 CKTGKIDAADELMQKMIS 380
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P VR L+ GL +G +E A + ++M++ G +P++ T+ +LI+ C G ++
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR 303
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + G + T+ +LI A+ K ++EA L +LV+ G +Y +I G
Sbjct: 304 LLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC 363
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ D A ++ +G P+ Y++LI R + +A L +M E G+
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423
Query: 187 CFDLVTDGL 195
+ ++ D L
Sbjct: 424 TYTIIIDEL 432
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V L+QG N G+L+ A ++++ M G P+ TF+ LI+ +CK +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE S+ K G + Y LI + K G ID A L+ ++ +G P Y+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G R+ + A ++ KG + YT +I
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 12/205 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +++ L+ E K++ +KMI G +PD+ T+ + + C+ G
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E M + G ++ TY LI + G++ +AF +V G P Y
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532
Query: 121 IIKGAFRRGQFDDAF------------CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
+++ ++ D++ +I + P +Y+ I R R E
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEE 592
Query: 169 AANYLMEMTEMGLTPISRCFDLVTD 193
A ++ M M LTP + + D
Sbjct: 593 AKHFFMGMQNANLTPSEDVYTSIID 617
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ L +E A+ + ++K+G + + SLI+ +CK+G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D +Y LI + + + +A +L +++E G P Y
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II R + F ++ G P+ YT + GR +A + +++M + G
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P ++ + G N G
Sbjct: 488 VFPNLVTYNTLIRGYANLG 506
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +++A +++ KMI +G PD +++SLI+ +C+ ++ M + + G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A TY I+I + + + ++ ++ G NP Y ++ G+ +DA
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +G PN Y TLI G +A + M G P
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P L+ GL L A M+ M+++G T+ +I+ + +
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + G D+ TY + + + + G +++A ++ +V+ G P Y
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+I+G G AF F + KG PN YT L+ +
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
+R L+ AG + +AKQ + ++ G PD + S + C++G + ++
Sbjct: 72 LRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFV 131
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ G TY L+ + AGM+ EA + + D P +YA ++ G G
Sbjct: 132 LMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAG 191
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A E G PN VY LI G A M +P R +
Sbjct: 192 RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYT 251
Query: 190 LVTDGLKNCGKHDLA 204
+ GL GK + A
Sbjct: 252 ELIHGLCKSGKVERA 266
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 4/200 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+R + L+ L + + ++M + +L T+ +LI C +G++ +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G D Y + +AGM+ A R+ + G Y ++ G
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F ++ P+ VY T++ GR EA L E G P
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + DG N G+ + A K+
Sbjct: 215 YNALIDGYCNAGEMEHALKV 234
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + + V+ G +E A+ M+ +M+ +G P+L T+N+LI G
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL--------LHNLVED-GH 111
V + + G + +Y +L+ V K D + + L L+ED
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITE 567
Query: 112 NPFP---SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
P +Y+ I+ R + ++A FF ++ P+ VYT++I C
Sbjct: 568 RQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCA 620
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + ++M+KQG PD+ TFN LI +CK G V+ +++ V K G C ++ T+ I I
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ + G IDEA RLL ++V +G P Y +I G + + +A C+ ++ G P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y T+I + G A L + G P + + +GL N G + A
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + +L+V GL G L A ++N I +G PD+ TFN+LI+ CK
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ ++ G DV TY L+ + KA +D ++E G P Y
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+I+ + + +A F E+K +G P+ TLI +C G
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNG 580
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + ++ G AG +++A +++ + +G PD T++SLI +C G+
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++Y + G + Y L+ +SK G++ +A +L+ +++E G +P Y
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G DA ++ KG P+ + TLI + +A L M G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+TP ++ + +GL K D
Sbjct: 492 ITPDVITYNTLLNGLCKARKLD 513
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 5/197 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF + + LV+GL G + A Q++ M++ G PD+ T+N ++ +CK G +
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ G D+ T+ LI K +D+A +L ++ G P Y ++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + D+ F + KG PN Y LI + + EA EM GLT
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 183 PISRCFDLVTDGLKNCG 199
P D+VT CG
Sbjct: 564 P-----DIVTLCTLICG 575
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G ++ ++++ +K++K+G P+L TFN I+ +C+ G
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + S+ G DV +Y LI K + EA LH +V G P Y
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G +A + KG P+ Y++LI G A E E G
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 181 LTPISRCFDLVTDGLKNCG 199
++ + GL G
Sbjct: 387 FKHSIILYNTLVKGLSKQG 405
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V + ++ G +A +++N M QG + + ++ ++I K
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + K G C D+ T+ LI + K G + E+ +L +++ G P +
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+G R+G D+A I +G P+ Y TLI + + VEA YL +M G
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + +G G A+KI
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKI 343
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ G L A+ ++KM+ G +P+ T+N++I CK+G ++
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQN 339
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ G D TY LI + G ++ A + + +E G LY ++K
Sbjct: 340 ADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVK 399
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G A ++ G P+ Y ++ + G +A L + G P
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
F+ + DG C + ++ + IE L+ L
Sbjct: 460 DIFTFNTLIDGY--CKQRNMDKAIEILDTML 488
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + L+ G ++ A ++++ M+ G PD+ T+N+L+ +CK+ +++
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
V+ + ++ + G ++ TY ILI + K + EA L + G P +I
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574
Query: 124 GAFRRGQFDDAFCFFSEIK 142
G G+ D A+ F I+
Sbjct: 575 GLCSNGELDKAYELFVTIE 593
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ GL A L++ M+++G P++ T+N LIE+ CK +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E++ + G D+ T LI + G +D+A+ L + ++ + +
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606
Query: 121 IIKGAF-RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ AF + A F ++ P+ Y +I + G A +L+E
Sbjct: 607 IMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GL P V + L C H L+E +
Sbjct: 667 GLVPSFTTCGKVLNCL--CVTHRLSEAV 692
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V+ + ++ L+ GY A ++ +M G PD+ T +++ C +G + +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ G + +Y +I K EA+ L +++ G P + +I +
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+G ++ FS++ +G PN + I R G EAA L + GLTP
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 85/190 (44%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G ++ A + +M +P ++++N+++ + + G ++Y + +G DV T+
Sbjct: 90 GKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I + + G A RLL+N+ G Y +I G ++ +A+ F E+
Sbjct: 150 TIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLK 209
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G P+ + LI + + G E+ ++ + G+ P F++ GL G D
Sbjct: 210 QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDE 269
Query: 204 AEKIEQLEVS 213
A ++ + VS
Sbjct: 270 AARLLESIVS 279
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+P V ++L+ L G L A ++ KM + G P+ ++N L+ CK +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + G D+ TY ++ A+ K G +++A +L+ L G +P Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A E++ K P+ Y++L+ R G+ EA + E MG
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + F+ + GL + D A
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++LV G+ G L+ A + +N M G P++ T N ++ ++C +G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V T+ ILI + + G++ A +L + + G P Y P
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A + + +G P+ Y T++T + G+ +A L +++ G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P+ ++ V DGL GK A K+
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKL 471
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A + + +M+ +G PD+ T+N+++ +CK G+
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE VE+ + G + TY +I ++KAG +A +LL + P Y+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ D+A FF E + G PN + +++ + + A ++L+ M G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 181 LTPISRCFDLVTDGL 195
P + ++ +GL
Sbjct: 550 CKPNETSYTILIEGL 564
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V + +++ L ++G L+ A +++++M+++ PD+ T+ LIE C+ V ++
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + G DV TY +L+ + K G +DEA + L+++ G P + I++
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G++ DA +++ KG P+ + LI R G A + L +M + G P S
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLE 211
++ + G C + + IE LE
Sbjct: 381 SYNPLLHGF--CKEKKMDRAIEYLE 403
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + ++ L G +E A +++N++ +G P L T+N++I+ + K+G+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + D TY L+ +S+ G +DEA + H G P +
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q D A F + +G PN YT LI G EA L E+ G
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 181 L 181
L
Sbjct: 585 L 585
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE--------- 66
L++G G A +++ + G+ PD+ T+N +I CK+GE+ +
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 67 -------MYYSVCKLGSCA----------------DVSTYKILIPAVSKAGMIDEAFRLL 103
+ S+C G DV TY ILI A + + A +LL
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGR 162
+ + G P Y ++ G + G+ D+A F +++ G PN + ++ +MC
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
GR+++A L +M G +P F+++ + L C K L I+ LE
Sbjct: 323 -GRWMDAEKLLADMLRKGFSPSVVTFNILINFL--CRKGLLGRAIDILE 368
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
++ ++ G LE + + M+ G+ PD+ +LI C+ G+ ++ + G+
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
DV TY ++I KAG I+ A +L + +P Y I++ G+ A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ + P+ YT LI R A L EM + G TP ++++ +G+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 197 NCGKHDLAEK 206
G+ D A K
Sbjct: 286 KEGRLDEAIK 295
>gi|341606821|gb|AEK83513.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 205
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
Y++LI G+ GR EA EM+E G T S C++ + D L GK
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGK 169
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 182
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 100 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 158
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ ++A F ++ + ++ VYT I + G
Sbjct: 159 ALIDALTKHGKVNEAMTLFKRME-EEEGCDQTVYTYTILISG 199
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 135
Query: 202 DLAEKI 207
D AE++
Sbjct: 136 DEAERL 141
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + + + + AG +E + + ++ QG PD+ +++ LI + K+G
Sbjct: 543 MVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGF 602
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++Y + + G DV Y +I K+G +D+A++LL + G P Y
Sbjct: 603 SRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGS 662
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D+A+ F E K G N +Y++LI G+ GR EA L E+ + G
Sbjct: 663 VVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 722
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
LTP S ++ + D L AE+I++ +V +++
Sbjct: 723 LTPNSYTWNCLLDALVK------AEEIDEAQVCFQNM 753
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P VR +L+ GL+ AG+ ++ +M +QG D+ +N++I+ CKSG+V+
Sbjct: 581 QGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDK 640
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G V TY ++ ++K +DEA+ L G + +Y+ +I
Sbjct: 641 AYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLID 700
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ D+A+ E+ KG PN + L+ + EA M + +P
Sbjct: 701 GFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSP 760
Query: 184 ISRCFDLVTDGL 195
+ + ++ +GL
Sbjct: 761 NAMTYSIMINGL 772
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L G +E A ++ ++M +Q + P+L T+N LI+ +CK+GE+E
Sbjct: 372 KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEA 430
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ ++ + G ++ T I+I + KA +DEA + L +P + +I
Sbjct: 431 ALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLID 490
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G RRG+ DDA+ + ++ PN VYT+LI + GR + EM G +P
Sbjct: 491 GLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 5/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V LV+ G +++A ++++M DL +N I+ K G+
Sbjct: 229 MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGK 288
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA- 119
V+ + ++ + G D TY LI + KA +DEA L L D + P +YA
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEEL--DLNRSVPCVYAY 346
Query: 120 -PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G G+FD+A+ K KG P+ Y ++T GR G+ EA EM +
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P ++++ D L G+ + A K++
Sbjct: 407 -DAAPNLTTYNILIDMLCKAGELEAALKVQ 435
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + ++++ L A L+ A + + + PD TF SLI+ + + G
Sbjct: 438 MKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGR 497
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +Y + +V Y LI K G ++ ++ +V G +P L
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNS 557
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F EIK +G P+ Y+ LI + G E EM E G
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L ++ V DG GK D A ++
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQL 644
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P R L+ GL G ++ A + KM+ P++ + SLI+ K G E +
Sbjct: 479 SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHK 538
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+Y + G D+ + V KAG +++ L + G P Y+ +I G
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G + + F E+K +G + Y T+I + G+ +A L EM GL P
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658
Query: 187 CFDLVTDGLKNCGKHDLA 204
+ V DGL + D A
Sbjct: 659 TYGSVVDGLAKIDRLDEA 676
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF LV + + L+ A ++ M K P + +LI + +
Sbjct: 159 MSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANR 218
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + ++G A+V + L+ ++ G ID A LL + + LY
Sbjct: 219 PDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNV 278
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D A+ FF E+K +G P+ YTTLI + + R EA E+
Sbjct: 279 CIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNR 338
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + G + GK D A
Sbjct: 339 SVPCVYAYNTMIMGYGSAGKFDEA 362
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 81/202 (40%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P L+ L A + + ++M + G + ++ F +L+ + G ++ +
Sbjct: 199 FRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAAL 258
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + AD+ Y + I K G +D A++ H + G P Y +I
Sbjct: 259 SLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVL 318
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + D+A F E+ + P Y T+I G G+F EA + L G P
Sbjct: 319 CKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSV 378
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
++ + L GK + A +I
Sbjct: 379 IAYNCILTCLGRKGKVEEALRI 400
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 68/154 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +++++G P+ T+N L++ + K+ E++ + ++ L
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY I+I + ++AF + + G P Y +I G + G +A
Sbjct: 758 CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEAR 817
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
F K G P+ Y +I + ++A
Sbjct: 818 GLFDRFKASGGVPDSACYNAMIEGLSSANKAMDA 851
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 68/170 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG P + L+ L+ A ++ A+ M P+ T++ +I +C +
Sbjct: 718 LMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRK 777
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G + TY +I ++KAG + EA L G P + Y
Sbjct: 778 FNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNA 837
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
+I+G + DA+ F E ++KG N L+ + +AA
Sbjct: 838 MIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAA 887
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 6/178 (3%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY--YSVCKLGSCADVSTYKILIP 88
+ V + +Q P E +N+ + + ++ +++ ++ SV G VS L+
Sbjct: 121 RWVERKTQQAHCP--EVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVE--LVA 176
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ K+ + EAF ++ + + P S Y +I + D F +++ G+
Sbjct: 177 SFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEA 236
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
N ++TTL+ + R GR A + L EM T +++ D GK D+A K
Sbjct: 237 NVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWK 294
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ G G + SA M KM+ G PD+ TF SLI+ C+ GE
Sbjct: 311 MVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++++ + +V TY +LI A+ K I EA L +L P P +Y P
Sbjct: 371 VNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNP 430
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A +E++ K P++ +T LI GR VEA + +M E+
Sbjct: 431 VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + L G + A +I+Q
Sbjct: 491 CVPDEITINSLISCLLKAGMPNEASQIKQ 519
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNK-MIKQGSDPDLETFNSLIETICKSG 59
M + G P + + L+ G + ++ + M+ +G PD+ T+ S+I CK G
Sbjct: 240 MGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLG 299
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ E++ + G + T+ +LI K G + A + ++ G P +
Sbjct: 300 DMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFT 359
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R G+ + + E+K++ PN Y LI + R EA N+L +
Sbjct: 360 SLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSS 419
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ V DG GK D A I
Sbjct: 420 EVVPKPFIYNPVIDGFCKAGKVDEANFI 447
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +LLV G L+SAK +N++ G +N+L+ + K
Sbjct: 135 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNL 194
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V ++ + DV ++ ILI + + G ID+AF N+ G P Y
Sbjct: 195 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R + E + IKG P+ YT++I+ + G A+ EM
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 180 GLTPISRCFDLVTDGLKNCG 199
G+ P F+++ DG G
Sbjct: 315 GIKPNDFTFNVLIDGFGKVG 334
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G AG ++ A +V +M ++ PD TF LI C G + + +Y + ++
Sbjct: 431 VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
D T LI + KAGM +EA ++ ++ + SL +P+ + + R
Sbjct: 491 CVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSR 542
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%)
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
+TY +L+ + K G+ D A + + DG P S+ ++ R G+ D A F +E
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ G + VY L+ M + EA E E P F+++ GL G+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 201 HDLAEKIEQ 209
D A + Q
Sbjct: 230 IDKAFEFFQ 238
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + ++M+KQG PD+ TFN LI +CK G V+ +++ V K G C ++ T+ I I
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ + G IDEA RLL ++V +G P Y +I G + + +A C+ ++ G P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y T+I + G A L + G P + + +GL N G + A
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + ++ G AG +++A +++ + +G PD T++SLI +C G+
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++Y + G + Y L+ +SK G++ +A +L+ +++E G +P Y
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G DA ++ KG P+ + TLI + +A L M G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+TP ++ + +GL K D
Sbjct: 492 ITPDVITYNTLLNGLCKARKLD 513
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + +L+V GL G L A ++N I +G PD+ TFN+LI+ CK
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ ++ G DV TY L+ + KA +D ++E G P Y
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+I+ + + +A F E+K +G P+ TLI +C G
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNG 580
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 5/197 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF + + LV+GL G + A Q++ M++ G PD+ T+N ++ +CK G +
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ G D+ T+ LI K +D+A +L ++ G P Y ++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + D+ F + KG PN Y LI + + EA EM GLT
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 183 PISRCFDLVTDGLKNCG 199
P D+VT CG
Sbjct: 564 P-----DIVTLCTLICG 575
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G ++ ++++ +K++K+G P+L TFN I+ +C+ G
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + S+ G DV +Y LI K + EA LH +V G P Y
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G +A + KG P+ Y++LI G A E E G
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 181 LTPISRCFDLVTDGLKNCG 199
++ + GL G
Sbjct: 387 FKHSIILYNTLVKGLSKQG 405
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V + ++ G +A +++N M QG + + ++ ++I K
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + K G C D+ T+ LI + K G + E+ +L +++ G P +
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+G R+G D+A I +G P+ Y TLI + + VEA YL +M G
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + +G G A+KI
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKI 343
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ G L A+ ++KM+ G +P+ T+N++I CK+G ++
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQN 339
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ G D TY LI + G ++ A + + +E G LY ++K
Sbjct: 340 ADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVK 399
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G A ++ G P+ Y ++ + G +A L + G P
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
F+ + DG C + ++ + IE L+ L
Sbjct: 460 DIFTFNTLIDGY--CKQRNMDKAIEILDTML 488
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + L+ G ++ A ++++ M+ G PD+ T+N+L+ +CK+ +++
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
V+ + ++ + G ++ TY ILI + K + EA L + G P +I
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574
Query: 124 GAFRRGQFDDAFCFFSEIK 142
G G+ D A+ F I+
Sbjct: 575 GLCSNGELDKAYELFVTIE 593
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ GL A L++ M+++G P++ T+N LIE+ CK +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E++ + G D+ T LI + G +D+A+ L + ++ + +
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606
Query: 121 IIKGAF-RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ AF + A F ++ P+ Y +I + G A +L+E
Sbjct: 607 IMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GL P V + L C H L+E +
Sbjct: 667 GLVPSFTTCGKVLNCL--CVTHRLSEAV 692
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P L+ GL N G + A + + +++G + +N+L++ + K G V
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ TY +++ + K G + +A +L++ + G P + +I
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++ D A + G P+ Y TL+ + + + M E G TP
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIE 208
++++ + C ++E +E
Sbjct: 530 NIITYNILIESF--CKDRKVSEAME 552
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V+ + ++ L+ GY A ++ +M G PD+ T +++ C +G + +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ G + +Y +I K EA+ L +++ G P + +I +
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+G ++ FS++ +G PN + I R G EAA L + GLTP
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 85/190 (44%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G ++ A + +M +P ++++N+++ + + G ++Y + +G DV T+
Sbjct: 90 GKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I + + G A RLL+N+ G Y +I G ++ +A+ F E+
Sbjct: 150 TIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLK 209
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G P+ + LI + + G E+ ++ + G+ P F++ GL G D
Sbjct: 210 QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDE 269
Query: 204 AEKIEQLEVS 213
A ++ + VS
Sbjct: 270 AARLLESIVS 279
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L+ G + G +E A ++ ++M+ G + +L +N+L+ +CK+G+
Sbjct: 302 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + + G D TY +LI + + AF LL + + P Y+
Sbjct: 362 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 421
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G R G E+ + G PN VYTTL+T + GR E+ L M E G
Sbjct: 422 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 481
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK--IEQLEVSLR 215
+ P C++ + G + + A +E LE LR
Sbjct: 482 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 518
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V+ +L+ GL G + A + +++ ++G P+ T+NSLI CK G V+ ++
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+C G D+ TY ILI + KAG I+ A L ++ G P YA ++ G +
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
AF E+ ++G PP+ +Y ++ C + +F +A + EM E G + F+
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFN 769
Query: 190 LVTDGLKNCGK-----HDLAEKIEQ 209
+ +G GK H L E IE+
Sbjct: 770 TLIEGYCKSGKLQEANHLLEEMIEK 794
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + G AG +E A + N+M+ G P++ + +LIE CK G
Sbjct: 512 MLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGN 571
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + DV TY +LI +S+ G + EAF + L E G P Y
Sbjct: 572 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 631
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ ++G D A E+ IKG P+ Y LI + G A N ++ G
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691
Query: 181 LTPISRCFDLVTDG 194
LTP + + DG
Sbjct: 692 LTPNCVTYAAMVDG 705
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG NP + ++L+ GL AG +E AK + + + +G P+ T+ ++++ CKS
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G D Y +++ K ++A L ++E G S +
Sbjct: 712 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNT 770
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ +A E+ K PN YT+LI + G EA +EM E
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P ++ + + G N G
Sbjct: 831 VMPTAKTYTSLLHGYHNIG 849
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG P + L+ G G ++ A Q++ +M +G +PD+ T+N LI+ +CK+GE
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G + TY ++ K+ AF+LL ++ G P +Y
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + +F+ A F E+ KG + TLI + G+ EA + L EM E
Sbjct: 737 ILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQ 795
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE-KIEQLEVSLRSV 217
P + + D NC + E K LE+ R+V
Sbjct: 796 FIPNHVTYTSLID--HNCKAGMMGEAKRLWLEMQERNV 831
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV---- 61
F P + + L+ LL +E ++ + M PD+ T+ ++I CK G V
Sbjct: 185 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244
Query: 62 -------------EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
+ +E+ S+ G D+ TY ILI EA +L +++
Sbjct: 245 RVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 304
Query: 109 DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
G P P Y +I G R+G + AF E+ G N ++ TL+ + G+ +
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 364
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
A + EM E G+ P S+ + L+ +G +C ++A E L+
Sbjct: 365 ALEIMQEMMEKGVEPDSQTYSLLIEG--HCRGQNMARAFELLD 405
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
A L+ A ++ M+ +G PDL T++ LI C M + +G + T
Sbjct: 254 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 313
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y LI + G I++AFR+ +V G ++ ++ G + G+ + A E+
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 373
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
KG P+ Y+ LI RG A L EM + L P + ++ +GL CG
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 430
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G +E ++ ++ +M +QG PD+ +NSLI CK+
Sbjct: 442 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR 501
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + TY I SKAG ++ A R + ++ G P +Y
Sbjct: 502 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 561
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G +AF F I + + Y+ LI R G+ EA E+ E G
Sbjct: 562 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ + G G D A ++
Sbjct: 622 LLPNAFTYNSLISGSCKQGNVDKASQL 648
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +++ GL G L+ ++ +M+ G P+ + +L+ K G
Sbjct: 407 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 466
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + G DV Y LI KA ++EA L ++E P Y
Sbjct: 467 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G+ + A +F+E+ G PN +YT LI + G EA + +
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ + + ++ GL GK
Sbjct: 587 VLQDVQTYSVLIHGLSRNGK 606
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + LL++G + A +++++M K+ P + T++ +I +C+ G
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + Y L+ A +K G ++E+ +L + E G P Y
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A + E+ + PN Y I + G A Y EM G
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + + +G +C + ++ E
Sbjct: 552 VLPNVGIYTALIEG--HCKEGNVTE 574
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 7/203 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF V + L++G +G L+ A ++ +MI++ P+ T+ SLI+ CK+G
Sbjct: 757 MLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 815
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + TY L+ G + E L +V G P Y
Sbjct: 816 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 875
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT--MCGRG----GRFVEAANYLM 174
+I R G +A EI +KG P L T + RG G EAA L
Sbjct: 876 MIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935
Query: 175 EMTEMGLTPISRCFDLVTDGLKN 197
M + G + + DG +N
Sbjct: 936 SMVKFGWVSNTTSLGDLVDGNQN 958
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L+ G + G +E A ++ ++M+ G + +L +N+L+ +CK+G+
Sbjct: 311 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 370
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + + G D TY +LI + + AF LL + + P Y+
Sbjct: 371 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 430
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G R G E+ + G PN VYTTL+T + GR E+ L M E G
Sbjct: 431 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 490
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK--IEQLEVSLR 215
+ P C++ + G + + A +E LE LR
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 527
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V+ +L+ GL G + A + +++ ++G P+ T+NSLI CK G V+ ++
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+C G D+ TY ILI + KAG I+ A L ++ G P YA ++ G +
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
AF E+ ++G PP+ +Y ++ C + +F +A + EM E G + F+
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFN 778
Query: 190 LVTDGLKNCGK-----HDLAEKIEQ 209
+ +G GK H L E IE+
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEK 803
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + G AG +E A + N+M+ G P++ + +LIE CK G
Sbjct: 521 MLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGN 580
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + DV TY +LI +S+ G + EAF + L E G P Y
Sbjct: 581 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 640
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ ++G D A E+ IKG P+ Y LI + G A N ++ G
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700
Query: 181 LTPISRCFDLVTDG 194
LTP + + DG
Sbjct: 701 LTPNCVTYAAMVDG 714
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 2/204 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ G ++ AK+++ +M ++G P+L T+N +I +C++ ++ +E+
Sbjct: 213 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIEL 272
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G D+ TY ILI EA +L +++ G P P Y +I G R
Sbjct: 273 KRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR 332
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G + AF E+ G N ++ TL+ + G+ +A + EM E G+ P S+
Sbjct: 333 QGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 392
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLE 211
+ L+ +G +C ++A E L+
Sbjct: 393 YSLLIEG--HCRGQNMARAFELLD 414
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P + ++++ GL A L+ A ++ M+ +G PDL T++ LI C
Sbjct: 241 MGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKR 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
M + +G + TY LI + G I++AFR+ +V G ++
Sbjct: 301 SREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + A E+ KG P+ Y+ LI RG A L EM +
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P + ++ +GL CG
Sbjct: 421 LAPTVLTYSVIINGLCRCG 439
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG P + L+ G G ++ A Q++ +M +G +PD+ T+N LI+ +CK+GE
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G + TY ++ K+ AF+LL ++ G P +Y
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + +F+ A F E+ KG + TLI + G+ EA + L EM E
Sbjct: 746 ILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQ 804
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE-KIEQLEVSLRSV 217
P + + D NC + E K LE+ R+V
Sbjct: 805 FIPNHVTYTSLID--HNCKAGMMGEAKRLWLEMQERNV 840
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G +E ++ ++ +M +QG PD+ +NSLI CK+
Sbjct: 451 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + TY I SKAG ++ A R + ++ G P +Y
Sbjct: 511 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 570
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G +AF F I + + Y+ LI R G+ EA E+ E G
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ + G G D A ++
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQL 657
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF V + L++G +G L+ A ++ +MI++ P+ T+ SLI+ CK+G
Sbjct: 766 MLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 824
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + TY L+ G + E L +V G P Y
Sbjct: 825 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 884
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G +A EI +KG P + Y LI + F E L E+ E G
Sbjct: 885 MIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESG 944
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ G + G D A ++
Sbjct: 945 FRLGLPTCSVIARGFQIAGNMDEAAEV 971
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +++ GL G L+ ++ +M+ G P+ + +L+ K G
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + G DV Y LI KA ++EA L ++E P Y
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G+ + A +F+E+ G PN +YT LI + G EA + +
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 595
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ + + ++ GL GK
Sbjct: 596 VLQDVQTYSVLIHGLSRNGK 615
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P L + NSL+ + K +VE +++ +C DV TY +I A K G + +A R+
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L + E G +P Y II G R D+A + KG P+ Y LI
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 297
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
R EA L+EM ++GL P ++ + DG G + A +I+
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 343
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + LL++G + A +++++M K+ P + T++ +I +C+ G
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + Y L+ A +K G ++E+ +L + E G P Y
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A + E+ + PN Y I + G A Y EM G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + + +G +C + ++ E
Sbjct: 561 VLPNVGIYTALIEG--HCKEGNVTE 583
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + +++GL +A E A+ ++ +M ++ D TFN L++ C++G
Sbjct: 309 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 368
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G DV TY +I K G++DEA LL N+ G P Y
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R ++ DA S + +G PN + TLI + G +A L +M G
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK + E +E L V
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTE--EALELLNV 518
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++GL A A+++++ MI+QG P+ TFN+LI +CK G
Sbjct: 414 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGL 473
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG +EA LL+ ++ G P +Y+
Sbjct: 474 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 533
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ R G+ D F I+ + +Y +I+ + A ++ M G
Sbjct: 534 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 593
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P + ++ GL + G A+ + S R+V
Sbjct: 594 CMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 630
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +R ++ G+ G+ E A ++++M G P++ +N++++ +C +
Sbjct: 274 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 333
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
E EM+ C L D T+ IL+ + G++D LL ++E G P
Sbjct: 334 WEEAEDLLAEMFQEDCPL----DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI 389
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +I G + G D+A + G PN YT ++ R R+V+A + M
Sbjct: 390 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ G P F+ + + + C K + + IE L+
Sbjct: 450 IQQGCLPNPVTFNTLINFM--CKKGLVEQAIELLK 482
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L G + A ++++M +G + ++E C+ G V + G
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +++ A+ + G +DE LL L G P Y ++KG ++DD
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ G PPN + TLI R G F + L +M E G TP R + + DG+
Sbjct: 234 ELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGI 293
Query: 196 KNCGKHDLAEKI 207
G H++A I
Sbjct: 294 CKDGHHEVANDI 305
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 91/189 (48%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M++ G PD+ T+ ++I CK G V+ V + ++
Sbjct: 357 NILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA 416
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + +A +A L+ ++++ G P P + +I ++G +
Sbjct: 417 CGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQ 476
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G+TP + + +
Sbjct: 477 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMAS 536
Query: 194 GLKNCGKHD 202
L G+ D
Sbjct: 537 ALSREGRTD 545
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L+V + G ++ +++ K+ G +PD+ ++N++++ +C + + E+ + +
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+G +V+T+ LI + + G+ ++ L + E G P +YA II G + G +
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 301
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A S + G PN Y T++ R+ EA + L EM + F+++ D
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Query: 194 GLKNCGKHD-LAEKIEQL 210
G D + E +EQ+
Sbjct: 362 FFCQNGLVDRVIELLEQM 379
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 79/165 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ G G ++ A ++ M G P+ ++ +++ +C++
Sbjct: 379 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 438
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + + G + T+ LI + K G++++A LL ++ +G +P Y+
Sbjct: 439 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYST 498
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+I G + G+ ++A + + KG PN +Y+++ + R GR
Sbjct: 499 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 543
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + +++GL A + ++++ +M++ G P++ TFN+LI +C++G E
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQV 267
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E + + G D+ Y +I + K G + A +L + G P Y ++KG
Sbjct: 268 HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKG 327
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++++A +E+ + P + + L+ + G L +M E G P
Sbjct: 328 LCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387
Query: 185 SRCFDLVTDG 194
+ V +G
Sbjct: 388 VITYTTVING 397
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++ G SA + + + +G D N ++ IC+ G V+ VE+ +
Sbjct: 148 VILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSF 207
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+ +Y ++ + A D+ L+ +V G P + + +I R G F+
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQV 267
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
S++ G P+ +Y T+I + G A + L M GL P C++ V G
Sbjct: 268 HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKG 327
Query: 195 LKNCGKHDLAEKI 207
L + + + AE +
Sbjct: 328 LCSAERWEEAEDL 340
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ G G + SA M KM+ G PD+ TF SLI+ C+ GE
Sbjct: 311 MVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++++ + +V TY +LI A+ K I EA L +L P P +Y P
Sbjct: 371 VNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNP 430
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A +E++ K P++ +T LI GR VEA + +M E+
Sbjct: 431 VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + L G + A +I+Q
Sbjct: 491 CVPDEITINSLISCLLKAGMPNEASQIKQ 519
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNK-MIKQGSDPDLETFNSLIETICKSG 59
M + G P + + L+ G + ++ + M+ +G PD+ T+ S+I CK G
Sbjct: 240 MGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLG 299
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ E++ + G + T+ +LI K G + A + ++ G P +
Sbjct: 300 DMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFT 359
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R G+ + + E+K++ PN Y LI + R EA N+L +
Sbjct: 360 SLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSS 419
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ V DG GK D A I
Sbjct: 420 EVVPKPFIYNPVIDGFCKAGKVDEANFI 447
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +LLV G L+SAK +N++ G +N+L+ + K
Sbjct: 135 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNL 194
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V ++ + DV ++ ILI + + G ID+AF N+ G P Y
Sbjct: 195 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R + E + IKG P+ YT++I+ + G A+ EM
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 180 GLTPISRCFDLVTDGLKNCG 199
G+ P F+++ DG G
Sbjct: 315 GIKPNDFTFNVLIDGFGKVG 334
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G AG ++ A +V +M ++ PD TF LI C G + + +Y + ++
Sbjct: 431 VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
D T LI + KAGM +EA ++ ++ + SL +P+ + + R
Sbjct: 491 CVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSR 542
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%)
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
+TY +L+ + K G+ D A + + DG P S+ ++ R G+ D A F +E
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ G + VY L+ M + EA E E P F+++ GL G+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 201 HDLAEKIEQ 209
D A + Q
Sbjct: 230 IDKAFEFFQ 238
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P + +++V GL G LE A +++ KM+ G PD T+ S+I ++G
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++Y + G V TY +LI + G ++ AF + E G P Y
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A+ FF+E+ KG PN+ YT LI G + EA + +M + G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684
Query: 181 LTPIS 185
+ P S
Sbjct: 685 VQPDS 689
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
+ G L G A + +M+ +G PDL +N +++ +CK G +E E+ + G
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
D TY +I A + G + + + + ++ G P Y +I G +G+ + AF
Sbjct: 546 IPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFI 605
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+FSE++ KG PN Y +LI + R +A N+ EM E G+ P + ++ + +
Sbjct: 606 YFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN--E 663
Query: 197 NCGKHDLAEKI 207
NC + E +
Sbjct: 664 NCNMGNWQEAL 674
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 94/232 (40%), Gaps = 35/232 (15%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV----EF 63
P + + L+ GL G LE A+Q+ +MI +G PD+ T+ L+ CK G + EF
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 64 CVEMYYSVCKLGSCA-------------------------------DVSTYKILIPAVSK 92
EM + +L S A D+ Y +++ + K
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G ++EA LL +V DG P Y II G+ F E+ KG P+
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
YT LI GR A Y EM E G+ P ++ + +GL + D A
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQA 638
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+P V+ + +++ L + + A ++ M + G P + T+N+L+++ CK G+V+ +
Sbjct: 195 LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGL 254
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + + G + TY +LI +SK G ++A L+ +++ G Y P+I G
Sbjct: 255 DLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGY 314
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F +G +A E+ +KG P Y + I + GR +A L +M L P
Sbjct: 315 FNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G ++ ++++M ++G P+ T+N LI + K GE
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + K G TY LI GM+ EA L +V G +P + Y
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G+ DA S++ P+ Y TLI R G ++A E+ +
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P ++ + DGL G+ ++A++++
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLK 432
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ G G L A + +++ P + T+N+L++ +C+ GE+E ++
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D+ TY IL+ K G + A ++ +G YA I G +
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G AF E+ KG PP+ +Y ++ + G EA+ L +M G+ P
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP 547
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++L+ GL G E AK ++ +M+K G T+N LI G
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G+ V+TY I + K G + +A + L +++ + P Y
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF F E++ P Y TL+ R G A +EM G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ P + ++ +G G +A++
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQE 465
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V + + GL G + A Q ++ M+ PD+ ++N+LI C+ G
Sbjct: 330 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + + TY L+ + + G ++ A +L ++ +G P Y
Sbjct: 390 LMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ + G A FF E+ +G + Y T I + G A + EM G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P +++V DGL G + A ++ Q VS
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVS 542
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G LE A ++M ++G P++ T+NSLI +CK
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G + +Y ILI G EA L +++ G P ++
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694
Query: 121 IIK 123
++K
Sbjct: 695 LLK 697
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 65/159 (40%)
Query: 41 SDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
S+ ++ + LI K VE C+ ++ + K DV ++ + ++ +A
Sbjct: 160 SEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAV 219
Query: 101 RLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+ + E G P Y ++ + G+ SE++ +G PN Y LI
Sbjct: 220 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+ G F +A + EM + GL + ++ + G N G
Sbjct: 280 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKG 318
>gi|224576659|gb|ACN57003.1| At1g03560-like protein [Capsella grandiflora]
gi|224576663|gb|ACN57005.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ G + Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTPISRCFDLVTDG 194
G+TP + CF ++ G
Sbjct: 192 KGITPTAACFRALSTG 207
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 155
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y G S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERL 114
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A Q + M+ +G PD+ T+N+++ +CK G+
Sbjct: 147 MPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGK 206
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ VE+ + G + TY +I +SK G D+A LLH + G P Y+
Sbjct: 207 VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSS 266
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ ++A FF +++ G PN Y +++ + + A ++L M G
Sbjct: 267 LIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKG 326
Query: 181 LTPISRCFDLVTDGLKNCG 199
P + ++ +G+ N G
Sbjct: 327 CKPTEVSYTILIEGIANEG 345
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++LV G+ G L+ A + +N M GS P++ T N ++ ++C +G
Sbjct: 42 MGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGR 101
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V T+ ILI + + G++ A +L + G P Y P
Sbjct: 102 WMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNP 161
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A + + +G P+ Y T++T + G+ A L +++ G
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P+ ++ V DGL GK D A
Sbjct: 222 CSPVLITYNTVIDGLSKVGKTDQA 245
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V ++L+ L G L A ++ KM G P+ ++N L+ CK +
Sbjct: 112 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKK 171
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ TY ++ A+ K G +D A LL+ L G +P Y
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A E++ KG P+ Y++LI R G+ EA + ++ G
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ + GL + D A
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRA 315
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + ++ L G +++A +++N++ +G P L T+N++I+ + K G+
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE+ + + G DV TY LI +S+ G ++EA + H++ G P Y
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q D A F + + KG P YT LI G EA L E+ G
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361
Query: 181 LTPISRCFDLV 191
+ S +V
Sbjct: 362 VVKKSSAEQVV 372
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
+++++ +++ PD+ T+ LIE C V +++ + G DV TY +L+ +
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
K G +DEA + L+++ G P + I++ G++ DA +E+ KG P+
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ LI R G A + L +M G TP S ++ + G C + + I+ L
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGF--CKEKKMDRAIQYL 179
Query: 211 EV 212
E+
Sbjct: 180 EI 181
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G V +LLV L G A ++V +M +G PD+ T+N LI CK G
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 676
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ ++ + G A V TY LI A+SK G + E +L V G P LY
Sbjct: 677 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 736
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D AF E++ K P+ Y TL+ GR EA + EMTE G
Sbjct: 737 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 796
Query: 181 LTPISRCFDLVT 192
+ P DLVT
Sbjct: 797 IQP-----DLVT 803
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V L+ L G ++ ++ ++ +++G PDL +N+LI + SG
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + K D TY L+ + G +DEA +L+ + E G P Y
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G DA +E+ KG P Y LI + G+ +A N + EM E G
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866
Query: 181 LTPISRCFDLVTDGL 195
+TP + + +GL
Sbjct: 867 ITPDDSTYISLIEGL 881
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G G ++ A ++ M ++G + T+ +LI + K G+
Sbjct: 652 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 711
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G D+ Y LI + S +G ID AF ++ + + P Y
Sbjct: 712 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 771
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G G+ D+A E+ +G P+ Y TLI+ G +A EM G
Sbjct: 772 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 831
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL G+ D AE +
Sbjct: 832 FNPTLLTYNALIQGLCKNGQGDDAENM 858
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G + G L++A ++M+++G + T+N L+ + G E+ + G
Sbjct: 597 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 656
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY ILI K G + +A + N+ G Y +I ++GQ +
Sbjct: 657 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 716
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E +G P+ +Y LI G A + EM + + P ++ + GL
Sbjct: 717 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 776
Query: 196 KNCGKHDLAEKI 207
G+ D A K+
Sbjct: 777 CLLGRVDEARKL 788
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ G G ++ A ++ ++M+ +G P+ +N+LI C G+++ + + +
Sbjct: 561 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 620
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V+TY +L+ A+ G EA+ L+ + G P Y +I G + G A
Sbjct: 621 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 680
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + +G YT LI + G+ E E G+ P ++ + +
Sbjct: 681 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 740
Query: 195 LKNCGKHDLAEKI 207
G D A +I
Sbjct: 741 HSTSGNIDRAFEI 753
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P + + L+ G G ++ A ++ N+M+ +G +P L T+N+LI+ +CK+G+
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ M + + G D STY LI ++
Sbjct: 852 GDDAENMVKEMVENGITPDDSTYISLIEGLT 882
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGFNP + + L+QGL G + A+ MV +M++ G PD T+ SLIE + E
Sbjct: 827 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 6/151 (3%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TFN ++ +C +G+ +E+ + + + TY +I G + A ++ +
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 545
Query: 107 VEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGG 164
E G P Y +I G + G+ D+A F E+ KG P +Y LI G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ A Y M E G+ ++L+ L
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHAL 636
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 6/213 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + + + + AG +E + + ++ G PD ++ LI + K+G
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++Y++ + G D Y +I K+G +++A++LL + GH P Y +I G
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + D+A+ F E K KG N +Y++LI G+ GR EA + E+ + GLTP
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ + D L AE+I + V +S+
Sbjct: 724 VYTWNCLLDALVK------AEEISEALVCFQSM 750
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ G E ++ N+M++ G PDL N+ ++ + K+GE+E ++ + LG
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +Y ILI + KAG EA+ L + + E G Y +I G + G+ + A+
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+K KGH P Y ++I + R EA E G+ + + DG
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 700 GKVGRIDEA 708
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 107/273 (39%), Gaps = 70/273 (25%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P R +L+ GL+ AG+ A ++ M +QG D +N++I+ CKSG+V
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638
Query: 65 VEMYY---------SVCKLGSCAD--------------------------VSTYKILIPA 89
++ +V GS D V Y LI
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNP------------------------FPSL-------- 117
K G IDEA+ ++ L++ G P F S+
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758
Query: 118 ---YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y+ +I G + +F+ AF F+ E++ +G PN YTT+I+ + G VEA
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ E G S ++ + +GL N + A ++
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V L++ G +++A ++++M +PD+ +N I+ K+G+
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D TY +I + KA ++EA L ++ ++ P Y
Sbjct: 286 VDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+F+DA+ + KG P+ Y +++ GR G+ EA EM +
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ +S ++++ D L GK + A
Sbjct: 406 IPNLS-TYNIMIDMLCKAGKLETA 428
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L G ++ A + +M K+ + P+L T+N +I+ +CK+G++E
Sbjct: 369 KGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLET 427
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + ++ G +V T I++ + KA +D+A + L P Y +I+
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ D+A+ + ++ PN VYT+LI + GR + EM +G +P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +++V L A L+ A + + + PD T+ SLIE + + G
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++Y + + Y LI K G ++ ++ + ++ G +P L
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F EIK G P+ YT LI + G EA M E G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+R ++ V DG GK + A ++
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQL 641
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++GL G ++ A ++ +M+ P+ + SLI K G E ++Y + +LG
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG 544
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ + V KAG I++ L + G P Y +I G + G +A+
Sbjct: 545 CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAY 604
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F +K +G + Y T+I + G+ +A L EM G P + V DGL
Sbjct: 605 ELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664
Query: 196 KNCGKHDLA 204
+ D A
Sbjct: 665 AKIDRLDEA 673
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P +V + + L A + M K P + +LI + S +
Sbjct: 156 MSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRD 215
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + +LG +V + LI ++ G +D A LL + + P LY
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D A+ FF E+K G + YT++I + + R EA M +
Sbjct: 276 CIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ + G GK + A
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDA 359
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 6/209 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V L+ G G ++ A ++ +++++G P++ T+N L++ + K+ E+
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + S+ L + TY ILI + K ++AF + + G P Y +I
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMIS 802
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +A F + K KG + +Y +I R +A E G +
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI 862
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
++ ++ D L AE IEQ +
Sbjct: 863 YTKTCVVLLDSLHK------AECIEQAAI 885
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG P V + L+ L+ A + A M P+ T++ LI +CK +
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G +V TY +I ++KAG I EA L E G ++Y
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA 834
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + DA+ F E ++KG
Sbjct: 835 IIEGLSNANRASDAYRLFEEARLKG 859
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
E +NSL+ + ++ + ++ + G +T ++ + K+ + EAF +
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+ + P S Y +I D F +++ G+ N ++TTLI + R GR
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
A + L EM L P +++ D GK D+A K
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWK 291
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 62/153 (40%)
Query: 30 KQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPA 89
+Q++ +M G P T ++ + KS ++ ++ KL S Y LI A
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGA 209
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+S + D L + E G+ L+ +I+ R G+ D A E+K P+
Sbjct: 210 LSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPD 269
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+Y I G+ G+ A + EM GL
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLV 302
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 6/213 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + + + + AG +E + + ++ G PD ++ LI + K+G
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++Y++ + G D Y +I K+G +++A++LL + GH P Y +I G
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + D+A+ F E K KG N +Y++LI G+ GR EA + E+ + GLTP
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ + D L AE+I + V +S+
Sbjct: 724 VYTWNCLLDALVK------AEEISEALVCFQSM 750
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ G E ++ N+M++ G PDL N+ ++ + K+GE+E ++ + LG
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +Y ILI + KAG EA+ L + + E G Y +I G + G+ + A+
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+K KGH P Y ++I + R EA E G+ + + DG
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 700 GKVGRIDEA 708
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 107/273 (39%), Gaps = 70/273 (25%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P R +L+ GL+ AG+ A ++ M +QG D +N++I+ CKSG+V
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638
Query: 65 VEMYY---------SVCKLGSCAD--------------------------VSTYKILIPA 89
++ +V GS D V Y LI
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNP------------------------FPSL-------- 117
K G IDEA+ ++ L++ G P F S+
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758
Query: 118 ---YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y+ +I G + +F+ AF F+ E++ +G PN YTT+I+ + G VEA
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ E G S ++ + +GL N + A ++
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V L++ G +++A ++++M +PD+ +N I+ K+G+
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D TY +I + KA ++EA L ++ ++ P Y
Sbjct: 286 VDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+F+DA+ + KG P+ Y +++ GR G+ EA EM +
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ +S ++++ D L GK + A
Sbjct: 406 IPNLS-TYNIMIDMLCKAGKLETA 428
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L G ++ A + +M K+ + P+L T+N +I+ +CK+G++E
Sbjct: 369 KGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLET 427
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + ++ G +V T I++ + KA +D+A + L P Y +I+
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ D+A+ + ++ PN VYT+LI + GR + EM +G +P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +++V L A L+ A + + + PD T+ SLIE + + G
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++Y + + Y LI K G ++ ++ + ++ G +P L
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F EIK G P+ YT LI + G EA M E G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+R ++ V DG GK + A ++
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQL 641
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++GL G ++ A ++ +M+ P+ + SLI K G E ++Y + +LG
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG 544
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ + V KAG I++ L + G P Y +I G + G +A+
Sbjct: 545 CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAY 604
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F +K +G + Y T+I + G+ +A L EM G P + V DGL
Sbjct: 605 ELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664
Query: 196 KNCGKHDLA 204
+ D A
Sbjct: 665 AKIDRLDEA 673
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 6/209 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V L+ G G ++ A ++ +++++G P++ T+N L++ + K+ E+
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + S+ L + TY ILI + K ++AF + + G P Y +I
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMIS 802
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +A F + K KG + +Y +I R +A E G +
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI 862
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
++ ++ D L AE IEQ +
Sbjct: 863 YTKTCVVLLDSLHK------AECIEQAAI 885
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P +V + + L A + M K P + +LI + S +
Sbjct: 156 MSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRD 215
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + +LG +V + LI ++ G +D A LL + + P LY
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D A+ F E+K G + YT++I + + R EA M +
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ + G GK + A
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDA 359
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG P V + L+ L+ A + A M P+ T++ LI +CK +
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G +V TY +I ++KAG I EA L E G ++Y
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA 834
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + DA+ F E ++KG
Sbjct: 835 IIEGLSNANRASDAYRLFEEARLKG 859
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 82/212 (38%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M F P L+ L + + + +M + G ++ F +LI + G
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + DV Y + I KAG +D A++ H + +G Y
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + ++A F + P Y T+I G G+F +A + L G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
P ++ + L G+ D A +K E+++
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
E +NSL+ + ++ + ++ + G +T ++ + K+ + EAF +
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+ + P S Y +I D F +++ G+ N ++TTLI + R GR
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
A + L EM L P +++ D GK D+A K
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWK 291
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%)
Query: 30 KQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPA 89
+Q++ +M G P T ++ + KS ++ ++ KL S Y LI A
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGA 209
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+S + D L + E G+ L+ +I+ R G+ D A E+K P+
Sbjct: 210 LSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPD 269
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+Y I G+ G+ A EM GL
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLV 302
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P V +LV GL AG LE A ++++M +G + +N LI +C+ +
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + +C G D+ TY LI + K IDEAFRL HN++ DG Y
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNT 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG F A +++ +G ++ Y LI + G + +M G
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG 595
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L + +++ +GL GK D A
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNA 619
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ LL G + A +VN M+ +G D T+N LI+ CK G +E +E+Y +
Sbjct: 534 NTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIM 593
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G AD + I+I + K G +D AF L + + G P Y ++ G + G+ +
Sbjct: 594 DGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKE 653
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F ++++G P+ Y T I+ + G +A + E G P + ++++
Sbjct: 654 ALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V ++++ L ++SA ++ M K G P+ + +LI + + +
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + +G DV T+ +I + K I +A +L+ ++ G P Y
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEM 179
++ G R G+ ++A +I IK PN + TLI G+ EA ++L E M
Sbjct: 329 LLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++++ GL G A +
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDL 412
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + DL+++ L+ + A + M+ +G P + TF +++ +C EV+ +
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G + Y+ LI A+S+ + EA +LL + G P + +I G +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ DA + ++G P+ Y L+ R G+ EA L+++
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V+ + ++ GL + A ++V++M+ +G PD T+ L+ +C+ G++
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH-NLVEDGHNPFPSLYAPIIK 123
++ + C + + LI +G + EA L+ ++ G P Y ++
Sbjct: 343 RKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMH 398
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G A +E+ +G PN Y L+ + G EA L EM+ GLT
Sbjct: 399 GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLT 457
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 63/128 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ GL G +++A + + I +G PD+ T+NS++ +CK G ++ + ++ +
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY I K GM+++A + +E+G P + ++ ++ ++
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN 723
Query: 134 AFCFFSEI 141
F E+
Sbjct: 724 NFFVLDEL 731
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+Y +++ + A + ++++ G +P + ++K + D A ++
Sbjct: 185 SYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDM 244
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK- 200
G PN VY TLI + + EA L EM MG P + F+ V GL K
Sbjct: 245 TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKI 304
Query: 201 HDLAEKIEQL 210
HD + ++++
Sbjct: 305 HDATKLVDRM 314
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++GF P + + ++ GL G ++ A + +++ +G PD T+N+ I CK G V
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+Y + G T+ +L+ + K + F +L L
Sbjct: 688 DACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
>gi|341606825|gb|AEK83515.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 206
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
+M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +K+
Sbjct: 2 QEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKS 61
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G +++A RLLH ++++G P Y+ ++ G + G+ ++A +F + G N Y
Sbjct: 62 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFY 121
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
++LI G+ GR EA EM+E G T S C++ + D L GK
Sbjct: 122 SSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGK 168
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 4 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 63
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 64 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 123
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 124 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 181
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 39 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 98
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 99 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 157
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ ++A F ++ + ++ VYT I + G
Sbjct: 158 ALIDALTKHGKVNEAMTLFKRME-EEEGCDQTVYTYTILISG 198
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 15 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 74
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ Y+ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 75 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 134
Query: 202 DLAEKI 207
D AE++
Sbjct: 135 DEAERL 140
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G V +LLV L G A ++V +M +G PD+ T+N LI CK G
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 671
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ ++ + G A V TY LI A+SK G + E +L V G P LY
Sbjct: 672 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 731
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D AF E++ K P+ Y TL+ GR EA + EMTE G
Sbjct: 732 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 791
Query: 181 LTPISRCFDLVT 192
+ P DLVT
Sbjct: 792 IQP-----DLVT 798
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V L+ L G ++ ++ ++ +++G PDL +N+LI + SG
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + K D TY L+ + G +DEA +L+ + E G P Y
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G DA +E+ KG P Y LI + G+ +A N + EM E G
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861
Query: 181 LTPISRCFDLVTDGL 195
+TP + + +GL
Sbjct: 862 ITPDDSTYISLIEGL 876
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G G ++ A ++ M ++G + T+ +LI + K G+
Sbjct: 647 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 706
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G D+ Y LI + S +G ID AF ++ + + P Y
Sbjct: 707 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 766
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G G+ D+A E+ +G P+ Y TLI+ G +A EM G
Sbjct: 767 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 826
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL G+ D AE +
Sbjct: 827 FNPTLLTYNALIQGLCKNGQGDDAENM 853
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G + G L++A ++M+++G + T+N L+ + G E+ + G
Sbjct: 592 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 651
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY ILI K G + +A + N+ G Y +I ++GQ +
Sbjct: 652 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 711
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E +G P+ +Y LI G A + EM + + P ++ + GL
Sbjct: 712 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 771
Query: 196 KNCGKHDLAEKI 207
G+ D A K+
Sbjct: 772 CLLGRVDEARKL 783
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ G G ++ A ++ ++M+ +G P+ +N+LI C G+++ + + +
Sbjct: 556 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 615
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V+TY +L+ A+ G EA+ L+ + G P Y +I G + G A
Sbjct: 616 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 675
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + +G YT LI + G+ E E G+ P ++ + +
Sbjct: 676 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 735
Query: 195 LKNCGKHDLAEKI 207
G D A +I
Sbjct: 736 HSTSGNIDRAFEI 748
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P + + L+ G G ++ A ++ N+M+ +G +P L T+N+LI+ +CK+G+
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ M + + G D STY LI ++
Sbjct: 847 GDDAENMVKEMVENGITPDDSTYISLIEGLT 877
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGFNP + + L+QGL G + A+ MV +M++ G PD T+ SLIE + E
Sbjct: 822 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 6/151 (3%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TFN ++ +C +G+ +E+ + + + TY +I G + A ++ +
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 540
Query: 107 VEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGG 164
E G P Y +I G + G+ D+A F E+ KG P +Y LI G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ A Y M E G+ ++L+ L
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHAL 631
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P V +LV GL AG LE A ++++M +G + +N LI +C+ +
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + +C G D+ TY LI + K IDEAFRL HN++ DG Y
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNT 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG F A +++ +G ++ Y LI + G + +M G
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG 595
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L + +++ +GL GK D A
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNA 619
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ LL G + A +VN M+ +G D T+N LI+ CK G +E +E+Y +
Sbjct: 534 NTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIM 593
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G AD + I+I + K G +D AF L + + G P Y ++ G + G+ +
Sbjct: 594 DGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKE 653
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F ++++G P+ Y T I+ + G +A ++ E G P + ++++
Sbjct: 654 ALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV 712
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V ++++ L ++SA ++ M K G P+ + +LI + + +
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + +G DV T+ +I + K I +A +L+ ++ G P Y
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEM 179
++ G R G+ ++A +I IK PN + TLI G+ EA ++L E M
Sbjct: 329 LLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++++ GL G A +
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDL 412
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + DL+++ L+ + A + M+ +G P + TF +++ +C EV+ +
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G + Y+ LI A+S+ + EA +LL + G P + +I G +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ DA + ++G P+ Y L+ R G+ EA L+++
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V+ + ++ GL + A ++V++M+ +G PD T+ L+ +C+ G++
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH-NLVEDGHNPFPSLYAPIIK 123
++ + C + + LI +G + EA L+ ++ G P Y ++
Sbjct: 343 RKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMH 398
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G A +E+ +G PN Y L+ + G EA L EM+ GLT
Sbjct: 399 GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLT 457
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 63/128 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ GL G +++A + + I +G PD+ T+NS++ +CK G ++ + ++ +
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY I K GM+++A + +E+G P + ++ ++ ++
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN 723
Query: 134 AFCFFSEI 141
F E+
Sbjct: 724 NFFVLDEL 731
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++GF P + + ++ GL G ++ A + +++ +G PD T+N+ I CK G V
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+Y + G T+ +L+ + K + F +L L
Sbjct: 688 DACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+Y +++ + A + ++++ G +P + ++K + D A ++
Sbjct: 185 SYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDM 244
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK- 200
G PN VY TLI + + EA L EM MG P + F+ V GL K
Sbjct: 245 TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKI 304
Query: 201 HDLAEKIEQL 210
HD + ++++
Sbjct: 305 HDATKLVDRM 314
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V+ +++ GL ++ A + +M + P+ TFNSLI+ +CKSG
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGR 399
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + ADV TY LI A+ K +D+A L ++ P Y
Sbjct: 400 IAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTI 459
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F + IKG+ + YT +I+ + G F EA L +M + G
Sbjct: 460 LIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNG 519
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + FD++ L ++D AEK+
Sbjct: 520 CIPNAITFDIIICALFEKDENDKAEKL 546
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG + ++L+ + G + + ++ ++K+G PD+ T +LI+ +C GEV+
Sbjct: 98 KGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKK 157
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + V L D +Y LI + K G A +L+ NL E P +Y II
Sbjct: 158 ALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIID 217
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +A +SE+ K PN YTTLI G +EA L EM + P
Sbjct: 218 SLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINP 277
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
F ++ D L GK A+ +
Sbjct: 278 DVYTFSILIDALGKEGKMKAAKIV 301
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V +L+ L G +++AK ++ M+K PD+ T+NSL++ E
Sbjct: 270 MKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNE 329
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ S+ + G V +Y I+I + K M+DEA L + P +
Sbjct: 330 VKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNS 389
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + +++ + + Y++LI + +A +M
Sbjct: 390 LIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQE 449
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + ++ DGL G+ +A+++ Q
Sbjct: 450 IQPDMYTYTILIDGLCKGGRLKIAQEVFQ 478
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ V L+ L +L+ A + KMI Q PD+ T+ LI+ +CK G
Sbjct: 410 MRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGR 469
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G D+ TY ++I KAG+ DEA LL + ++G P +
Sbjct: 470 LKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDI 529
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II F + + D A E+ +G
Sbjct: 530 IICALFEKDENDKAEKLLREMIARG 554
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + L+ GL +G + +V+KM + D+ T++SLI+ +CK+
Sbjct: 375 MKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCH 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + D+ TY ILI + K G + A + +L+ G++ Y
Sbjct: 435 LDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTV 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G FD+A S+++ G PN + +I +A L EM G
Sbjct: 495 MISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554
Query: 181 L 181
L
Sbjct: 555 L 555
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K P V L+ G G L A ++N+M + +PD+ TF+ LI+ + K G+
Sbjct: 235 MNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGK 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K DV TY L+ + A + +++ + G P Y
Sbjct: 295 MKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTI 354
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F E+K K PN + +LI + GR + + +M +
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414
Query: 181 LTPISRCFDLVTDGL-KNC 198
+ + D L KNC
Sbjct: 415 QLADVITYSSLIDALCKNC 433
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G++P V L++GL G ++ A + + ++ D ++ +LI +CK GE +
Sbjct: 133 RGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKA 192
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ ++ + DV Y I+I ++ K ++ EA L + P Y +I
Sbjct: 193 AIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIY 252
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G +A +E+K+K P+ ++ LI G+ G+ A L M + + P
Sbjct: 253 GFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKP 312
Query: 184 ISRCFDLVTDG--LKNCGKH 201
++ + DG L N KH
Sbjct: 313 DVVTYNSLVDGYFLVNEVKH 332
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 70/167 (41%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + N+M+ P FN+++ ++ K + + + G +D+ T ILI
Sbjct: 53 AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
G I +F +L +++ G++P +IKG RG+ A F ++
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+R Y TLI + G A + + E + P ++++ D L
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSL 219
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 112/276 (40%), Gaps = 69/276 (25%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-------------------- 40
M D P V + L+ GL AG L+ A+Q++++M + G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 41 ------------SDPDLETFNSLIETICKSGEVE----FCVEM-----------YYSV-- 71
+ PD +T+N++I CKSGE++ F EM YS+
Sbjct: 140 SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILI 199
Query: 72 ---CKLGS-----------------CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH 111
CK + CA V + L+ KA +D A LL +++E G
Sbjct: 200 NGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGC 259
Query: 112 NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN 171
P Y+ II G R G D F ++ +G P+ YT L+T + G+ VEA
Sbjct: 260 APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACR 319
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ M E G TP + + LV DGL K D+A +
Sbjct: 320 LVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDL 355
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV G A L+ A+++++ M++ G PD+ T++++I+ +C+ G+V+ + + G
Sbjct: 234 LVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG 293
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +L+ + KAG + EA RL+ ++EDG P Y+ + G + + D A
Sbjct: 294 CKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMAN 353
Query: 136 CFFSEIKIKGHPPNRPVYTTLI 157
+ I+ KG + + L+
Sbjct: 354 DLLTSIRDKGRITDVVAFEALL 375
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + V L +G + A ++V M PD+ TFN+LI +CK+G ++
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G A++ TY LI +S AG EA ++ + P Y II G
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHG 165
Query: 125 AFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ G+ D A+ F E+K + G P+ Y+ LI + +A L EM
Sbjct: 166 FCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEM 218
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRL 102
D T+ L+ C +GE++ +++ + + G S Y + A+ K+G + EA +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ N+ + P + +I G + G+ D+A E++ G N Y TLI
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
GR EA ++ M M TP ++ ++ + G G+ D A
Sbjct: 137 AGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRA 175
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ GL G ++ ++ KM+ +G PD+ T+ L+ +CK+G+
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH----NPFPS 116
+ + + + G + TY ++ + K +D A LL ++ + G F +
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEA 373
Query: 117 LYAPIIKGAFRRGQF 131
L + K R F
Sbjct: 374 LLLSVKKRLLDRAAF 388
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
D TY +L+ A AG + A LL + + G P PS+Y + + G+ +A
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
+K P+ + TLI + GR EA L EM G ++ + +GL +
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 198 CGKHDLAEKIEQ 209
G+ A + Q
Sbjct: 137 AGRSGEAVLVMQ 148
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 112/276 (40%), Gaps = 69/276 (25%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-------------------- 40
M D P V + L+ GL AG L+ A+Q++++M + G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 41 ------------SDPDLETFNSLIETICKSGEVE----FCVEM-----------YYSV-- 71
+ PD +T+N++I CKSGE++ F EM YS+
Sbjct: 140 SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILI 199
Query: 72 ---CKLGS-----------------CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH 111
CK + CA V + L+ KA +D A LL +++E G
Sbjct: 200 NGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGC 259
Query: 112 NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN 171
P Y+ II G R G D F ++ +G P+ YT L+T + G+ VEA
Sbjct: 260 APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACR 319
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ M E G TP + + LV DGL K D+A +
Sbjct: 320 LVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDL 355
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 77/142 (54%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV G A L+ A+++++ M++ G PD+ T++++I+ +C+ G+V+ + + G
Sbjct: 234 LVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG 293
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +L+ + KAG + EA RL+ ++EDG P Y+ + G + + D A
Sbjct: 294 CKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMAN 353
Query: 136 CFFSEIKIKGHPPNRPVYTTLI 157
+ I+ KG + + TL+
Sbjct: 354 DLLTSIRDKGRVTDVVAFETLL 375
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + V L +G + A ++V M PD+ TFN+LI +CK+G ++
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G A++ TY LI +S AG EA ++ + P Y II G
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHG 165
Query: 125 AFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ G+ D A+ F E+K + G P+ Y+ LI + +A L EM
Sbjct: 166 FCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEM 218
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRL 102
D T+ L+ C +GE++ +++ + + G S Y + A+ K+G + EA +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ N+ + P + +I G + G+ D+A E++ G N Y TLI
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
GR EA ++ M M TP ++ ++ + G G+ D A
Sbjct: 137 AGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRA 175
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
D TY +L+ A AG + A LL + + G P PS+Y + + G+ +A
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
+K P+ + TLI + GR EA L EM G ++ + +GL +
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 198 CGKHDLAEKIEQ 209
G+ A + Q
Sbjct: 137 AGRSGEAVLVMQ 148
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 97/194 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + LV GL N G L AK ++++M+ P++ T+N+LI CK
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ ++ K G +V T+ L+ K G ++EAF L ++E G P S Y
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ ++ +E++ +G + Y LI+ +AA + EM + G
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 181 LTPISRCFDLVTDG 194
L P ++++ +G
Sbjct: 509 LKPSHLTYNILLNG 522
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +G P V + L+ G G +E A + M+++G P+ T+N LI C+ G+
Sbjct: 399 IGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGK 458
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G AD TY ILI A + +A RL+ +++ G P Y
Sbjct: 459 MEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNI 518
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G A +++ +G N Y LI R G+ +A L EM E G
Sbjct: 519 LLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKG 578
Query: 181 LTPISRCFDLVTD 193
L P ++++ +
Sbjct: 579 LIPNRTTYEIIKE 591
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 3/205 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQG---LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK 57
M GF P V + L+ G + G + A ++ +M++ P+ TFN LI+ CK
Sbjct: 256 MKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK 315
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ ++++ + G V TY L+ + G ++EA LL ++ P
Sbjct: 316 DENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVIT 375
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G ++ ++A F I +G PN + TL+ + G+ EA M
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHD 202
E G P + ++ + G GK +
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKME 460
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+MI++ P+L TFN++I +CK G++ ++ + G +V TY LI K G
Sbjct: 220 EMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMG 279
Query: 95 MIDEAFR---LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+ + ++ +L +VE+ +P + +I G + A F E++ +G P
Sbjct: 280 RVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVV 339
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
Y +L+ G+ EA L EM L P ++ + +G C K L E E
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGY--CKKKLLEEARE 394
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 9/210 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + ++ GL G L A +V+ M G P++ T+N+LI+ CK G
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280
Query: 61 VEFCVEMYYSVCKLGSCAD--VS----TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
V +MY + L + VS T+ +LI K + A ++ + G P
Sbjct: 281 VG---KMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPT 337
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y ++ G G+ ++A E+ PN Y LI + EA
Sbjct: 338 VVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD 397
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ + GLTP F+ + G GK + A
Sbjct: 398 NIGKQGLTPNVITFNTLLHGYCKFGKMEEA 427
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G ++L+ + A +++++M+ +G P T+N L+ C G
Sbjct: 469 MQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGN 528
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + K G A+V TY +LI + G +++A LL+ ++E G P + Y
Sbjct: 529 LRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEI 588
Query: 121 IIKGAFRRGQFDD 133
I + +G D
Sbjct: 589 IKEEMMEKGFLPD 601
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V ++L++ LLN G E ++++ KM + DP++ T++ LI T+C+ G++E
Sbjct: 288 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 347
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G D +Y LI A + G +D A L ++ DG P Y ++
Sbjct: 348 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 407
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ D A F ++ G PN Y T+ + G + A + ++EM G+ P
Sbjct: 408 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDP 467
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++ + L C + + +K +L V +RS
Sbjct: 468 DEITYNSMISCL--C-REGMVDKAFELLVDMRS 497
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K F+P ++++ L + G L+ A +++++++ P + T+ LIE G
Sbjct: 180 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGG 239
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G D+ TY +I + K GM+D AF ++ NL G P Y
Sbjct: 240 VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNI 299
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ +G++++ +++ + PN Y+ LIT R G+ EA N L M E G
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
LTP + +D + G+ D+A IE LE
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVA--IEFLET 389
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ + G ++ A +++++M+ +G PD+ T+N++I +CK G V+ EM
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ G DV +Y IL+ A+ G +E +L+ + + +P Y+ +I R
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ ++A +K KG P+ Y LI R GR A +L M G P
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 401
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ V L GK D A +I
Sbjct: 402 YNTVLATLCKNGKADQALEI 421
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P D L+ G L+ A + + MI G PD+ +N+++ T+CK+G+
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 414
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + ++G + S+Y + A+ +G A ++ +V +G +P Y
Sbjct: 415 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNS 474
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G D AF +++ P+ Y ++ + R +A + L M G
Sbjct: 475 MISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNG 534
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + ++ +G+ G AE +E
Sbjct: 535 CRPNETTYTVLIEGIGFAGYR--AEAME 560
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V +L+ L G +E A ++ M ++G PD +++ LI C+ G ++ +E
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ G D+ Y ++ + K G D+A + L E G +P S Y + +
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G A E+ G P+ Y ++I+ R G +A L++M P
Sbjct: 446 SSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVV 505
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLE 211
+++V G C H + + I+ L+
Sbjct: 506 TYNIVLLGF--CKAHRIEDAIDVLD 528
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 5/209 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+NP V L++G + A +++ + K G PD+ +N+LI CK
Sbjct: 111 MVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNR 169
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + D TY I+I ++ G +D A ++L L+ D P Y
Sbjct: 170 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTI 229
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I+ G D+A E+ +G P+ Y T+I MC G V+ A ++ E+
Sbjct: 230 LIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG--MVDRAFEMIRNLEL 287
Query: 180 -GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++++ L N GK + EK+
Sbjct: 288 KGCEPDVISYNILLRALLNQGKWEEGEKL 316
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
++G E+ LL +V G+NP L +IKG F A EI K P+
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVF 155
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y LI + R +A L M +P + ++++ L + GK DLA K+
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLE--TFNSLIETICKS 58
+S +G P ++ + ++ L+ AG L++A+++ ++M ++ + L ++ ++I+ +CK+
Sbjct: 176 LSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEM-RESRNVALNEYSYTAMIKALCKA 234
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+V+ EM + + G V TY +L+ A+ K+G ++EAFRL + + G P +
Sbjct: 235 GKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTF 294
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G R +F + E++ G PN +Y LI R G +A EM
Sbjct: 295 GILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVL 354
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++L+ L G+ + AE+I
Sbjct: 355 KKMKPTAVTYNLIAKALCKEGEMERAERI 383
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KG + + L+ GL Y++ A +++ M+ +G + D T+N +I CK ++E
Sbjct: 460 NKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKME 519
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++++ + + G D+ T+ L+ A G ++E F LL + +G P Y II
Sbjct: 520 EAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTII 579
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + A + +E+ +G PN +Y LI GR G A + + M G+
Sbjct: 580 DGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQ 639
Query: 183 PISRCF 188
P + +
Sbjct: 640 PTNVTY 645
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++ G A + AK+ + +++ +G P++ +N+LI ++G+
Sbjct: 563 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 622
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ G TY L+ + AG+++EA + E+ + Y
Sbjct: 623 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 682
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ +A +F E++ +G PN+ YTTL+ + G EA+ EM G
Sbjct: 683 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 742
Query: 181 LTP--------ISRCFDL 190
+ P I+RC ++
Sbjct: 743 VIPDNITYGTLIARCSEV 760
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L AG +++ +M+ ++ + G P + T+N L++ +CKSG VE + + + G
Sbjct: 227 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 286
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V T+ ILI +++ E +L + + G +P +Y +I R+G A
Sbjct: 287 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQAL 346
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +K P Y + + G A L +M +G+T F+ V L
Sbjct: 347 RLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWL 406
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +GF P + + L+ N G +E ++++M +G PD+ ++ ++I+ CK+ +
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKD 587
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + G +V Y LI + G I A + + +G P Y
Sbjct: 588 IRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGS 647
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++A FS+ + YT +I + G+ VEA Y EM G
Sbjct: 648 LMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRG 707
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++P + + G + A K+
Sbjct: 708 ISPNKLTYTTLMYAYSKSGNSEEASKL 734
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D+G P V + L+ G G + A V M G P T+ SL+ +C +G
Sbjct: 598 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGL 657
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ + V Y I+I K G + EA + G +P Y
Sbjct: 658 VEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTT 717
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G ++A F E+ G P+ Y TLI C + + E++
Sbjct: 718 LMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGA 777
Query: 181 LTPISRCFDLVTDGL 195
LT R ++++++G+
Sbjct: 778 LTKDDRMYNILSNGI 792
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
LES + N+M+ +G P+ + + +CK G+ + V +++ G +++T
Sbjct: 413 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNA 472
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + + + EA +++ ++ G Y +I+G + + ++A ++ +G
Sbjct: 473 LIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 532
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ + TL+ G+ E + L +M GL P + + DG +C D+ +
Sbjct: 533 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG--HCKAKDIRK 590
Query: 206 KIEQL 210
E L
Sbjct: 591 AKEYL 595
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L G + A + K + +G +L T N+LI +C+
Sbjct: 423 MVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKY 482
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G D TY I+I K ++EA +L ++ G P +
Sbjct: 483 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 542
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ ++ F ++K +G P+ Y T+I + +A YL E+ + G
Sbjct: 543 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 602
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
L P ++ + G G D++ I+ +E
Sbjct: 603 LKPNVFIYNALIGGYGRNG--DISGAIDAVET 632
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/172 (17%), Positives = 68/172 (39%), Gaps = 1/172 (0%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G+ A ++ ++M+ + P T+N + + +CK GE+E + + +G +
Sbjct: 340 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 399
Query: 84 KILIPA-VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
++ + + ++ + + +V G P L ++ + G+ +A + +
Sbjct: 400 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 459
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
KG N LI G EA + M G+ S ++++ G
Sbjct: 460 NKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRG 511
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + +++GL +A E A+ ++ +M ++ D TFN L++ C++G
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G DV TY +I K G++DEA LL N+ G P Y
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R ++ DA S + +G PN + TLI + G +A L +M G
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK + E +E L V
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTE--EALELLNV 493
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++GL A A+++++ MI+QG P+ TFN+LI +CK G
Sbjct: 389 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGL 448
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + G D+ +Y +I + KAG +EA LL+ ++ G P +Y+
Sbjct: 449 AEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 508
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ R G+ D F I+ + +Y +I+ + A ++ M G
Sbjct: 509 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 568
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P + ++ GL + G A+ + S R+V
Sbjct: 569 CMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 605
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 10/215 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +R ++ G+ G+ E A ++++M G P++ +N++++ +C +
Sbjct: 249 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 308
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
E EM+ C L D T+ IL+ + G++D LL ++E G P
Sbjct: 309 WEEAEDLLAEMFQEDCPL----DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI 364
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +I G + G D+A + G PN YT ++ R R+V+A + M
Sbjct: 365 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 424
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ G P F+ + + + C K + IE L+
Sbjct: 425 IQQGCLPNPVTFNTLINFM--CKKGLAEQAIELLK 457
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 91/189 (48%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M++ G PD+ T+ ++I CK G V+ V + ++
Sbjct: 332 NILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA 391
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + +A +A L+ ++++ G P P + +I ++G +
Sbjct: 392 CGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQ 451
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G+TP + + +
Sbjct: 452 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMAS 511
Query: 194 GLKNCGKHD 202
L G+ D
Sbjct: 512 ALSREGRTD 520
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ G G ++ A ++ M G P+ ++ +++ +C++
Sbjct: 354 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 413
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + + G + T+ LI + K G+ ++A LL ++ +G +P Y+
Sbjct: 414 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYST 473
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+I G + G+ ++A + + KG PN +Y+++ + R GR
Sbjct: 474 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 518
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 10/202 (4%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L G + A ++++M +G + ++E C+ G V + G
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +++ A+ + G +DE LL L G P Y ++KG ++DD
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233
Query: 136 CF----------FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
S++ G P+ +Y T+I + G A + L M GL P
Sbjct: 234 ELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNV 293
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
C++ V GL + + + AE +
Sbjct: 294 VCYNTVLKGLCSAERWEEAEDL 315
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 10/172 (5%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++ G SA + + + +G D N ++ IC+ G V+ VE+ +
Sbjct: 148 VILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSF 207
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV----------EDGHNPFPSLYAPIIKG 124
G D+ +Y ++ + A D+ L+ +V E G P +YA II G
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDG 267
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ G + A S + G PN Y T++ R+ EA + L EM
Sbjct: 268 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 319
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG ++ A + +M K G P++ +N L+ +C SG++E ++ + K
Sbjct: 156 LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM-KSH 214
Query: 76 SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
SC+ DV TY L+ AV KA ++E +L + G+ P ++ +I G R G+ + A
Sbjct: 215 SCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKA 274
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + G PN+ YTTLI+ R + ++A +MT+ + P + ++ + G
Sbjct: 275 LEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAG 334
Query: 195 LKNCGKHDLAEKI 207
G D AEK+
Sbjct: 335 YCKRGSMDEAEKL 347
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 102/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DK V +++ L+ E + +++ +M+ G +PD+ FN +++ +S
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+Y + + G D +Y ILI ++K G +DE+ ++L +V G P Y+
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ + + D A F E+ GH P+R ++ LI + G+ +A+ +M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++++ GL + G+ + A +
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTL 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L+ GL ++G LE A + +M PD+ T+N+L++ +CK+
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ ++ G +V T+ LI + + G +++A + +++E G P Y
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EM 179
+I G R + A F ++ PP+ Y +LI + G EA EM+
Sbjct: 296 LISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 355
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
GL P F+ + DG GK
Sbjct: 356 GLQPTIVTFNTLIDGFCKLGK 376
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V + ++QG + +E A+++ M++ G PD +++ LI + K G+
Sbjct: 36 MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGK 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G + Y L+ A++KA +D A L ++ GH+P ++
Sbjct: 96 LDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYE 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA F ++ G PN PVY L+ G+ +A EM
Sbjct: 156 LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS 215
Query: 181 LTPISRCFDLVTDGL 195
+P ++ + D +
Sbjct: 216 CSPDVVTYNTLLDAV 230
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P +L+ GL G L+ + +++++M+ +G P ++ ++SL+ + K+
Sbjct: 71 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARR 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + + G D + LI + +AG + +A + + G P +Y
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G GQ + A F+E+K P+ Y TL+ + R E M G
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P F + GL G+ + A ++
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEV 277
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
M+ P + L+ G G ++ A+++ +M G P + TFN+LI+ CK G
Sbjct: 316 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 375
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ E+ + G AD TY+ILI +S+A +DEA + + E P
Sbjct: 376 KLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 435
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
+ G + G D A+ F + G PN + L + GR VE A LME
Sbjct: 436 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGR-VEDAQKLME 490
>gi|242042461|ref|XP_002468625.1| hypothetical protein SORBIDRAFT_01g049260 [Sorghum bicolor]
gi|241922479|gb|EER95623.1| hypothetical protein SORBIDRAFT_01g049260 [Sorghum bicolor]
Length = 422
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 6/205 (2%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
VR ++LV AG A+++ ++M K GSDPD T+N L+ + K+G + +
Sbjct: 208 VRYYNVLVAAKCKAGDFVGAREVFDEMRKSGSDPDANTWNYLLGCLLKNGRLAEACGLVE 267
Query: 70 SVCKLGSCADVS---TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ +L C+++ TY+IL KAG +D A ++L+ + + P ++++ IKG F
Sbjct: 268 AMERL-KCSEIPNSLTYEILTYHACKAGKMDSAMQILNQMFSENLTPRITIHSAFIKGYF 326
Query: 127 RRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G+ +DA + +++ + H NR Y+ L + + GR V+A L E+ + GL P
Sbjct: 327 YAGRIEDACKYVNDMSTRDRHSVNRN-YSLLAKLLRKSGRTVDAGRVLYELMDKGLRPDH 385
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQL 210
+ V L G+ DLA +++ +
Sbjct: 386 SAYVKVAKDLHKMGRGDLASELKMM 410
>gi|224576655|gb|ACN57001.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ G + Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTPISRCFDLVTDG 194
G+TP + CF ++ G
Sbjct: 192 KGITPTAACFRALSTG 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 155
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y G S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|224576653|gb|ACN57000.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTPISRCFDLVTDG 194
G+TP + CF ++ G
Sbjct: 192 KGITPTAACFRALSTG 207
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 155
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|226493958|ref|NP_001147934.1| fertility restorer [Zea mays]
gi|195614680|gb|ACG29170.1| fertility restorer [Zea mays]
Length = 563
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC-KSGE 60
S G P V + L+ L+ AG A+ + + M+ G P+ +FN L++ ++ +
Sbjct: 87 SSAGVPPSVLCYNTLLNALVEAGRAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTAD 146
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G DV T+ L+ + +AG +DEA+ +L ++++G P Y P
Sbjct: 147 FHLAYDQIHAMRRHGLLPDVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTP 206
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I++G R+GQ ++A ++ G PPN Y LI RF E L E+ G
Sbjct: 207 IVQGYCRQGQIEEATNLIGFMEEAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKG 266
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
+ +++ D L GK +A E ++Q E
Sbjct: 267 HELSTVTYNIYMDAL---GKKGMAKEALKQFE 295
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V LV GL AG L+ A +++ M+++G P + T+ +++ C+ G+
Sbjct: 157 MRRHGLLPDVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQ 216
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G + TY +LI A+ E ++L + GH Y
Sbjct: 217 IEEATNLIGFMEEAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNI 276
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ ++G +A F ++ KG HP + L +C RF +A + L T++
Sbjct: 277 YMDALGKKGMAKEALKQFEALQCKGLHPTAFTLSIILNCLCCT-SRFSQAISILERSTDL 335
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
++ V L + G+
Sbjct: 336 NFCAAVVAYNTVMSRLCDMGR 356
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 78/207 (37%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V +VQG G +E A ++ M + G P+ T+N LI +C
Sbjct: 192 MLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLIGFMEEAGCPPNAVTYNVLIRALCDDAR 251
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G TY I + A+ K GM EA + L G +P +
Sbjct: 252 FAEVEQVLAEIETKGHELSTVTYNIYMDALGKKGMAKEALKQFEALQCKGLHPTAFTLSI 311
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ +F A Y T+++ GR+ L +M +
Sbjct: 312 ILNCLCCTSRFSQAISILERSTDLNFCAAVVAYNTVMSRLCDMGRWPAVLELLADMIKKC 371
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P +R ++ L K +A+K+
Sbjct: 372 IVPNTRTLNIFIHSLCIADKLSVAKKL 398
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 7/197 (3%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+D F V + ++ L + G + +++ MIK+ P+ T N I ++C + ++
Sbjct: 333 TDLNFCAAVVAYNTVMSRLCDMGRWPAVLELLADMIKKCIVPNTRTLNIFIHSLCIADKL 392
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAP 120
++ Y+ G A+ TY LI + G EA + + E + P Y
Sbjct: 393 SVAKKLVYNQ---GFPANAVTYNTLIHSFYLRGEAYEADNMFAYMTEVANIAPDEVTYTI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R+G+FD A FF E ++ + T L+ R R N L+ E+
Sbjct: 450 MVDGLCRQGKFDKATDFFKESLRNRLRLSKDLLTALLNGLARSDR---NTNILVVFQEIE 506
Query: 181 LTPISRCFDLVTDGLKN 197
RC+ + D +++
Sbjct: 507 RQGFVRCYLIFGDTVRS 523
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P LV GL G + SA +VNK+ K G P L +N+LI ++CK G+
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G + TY ILI + K G +D A L + E G Y+
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F E+ G PN +YT+LI+ + G A EMT G
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
++P + F + GL C + +AE
Sbjct: 491 ISPNTYTFTALISGL--CHANRMAE 513
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ + G L+ A+ + N M +G P+ T++ LI++ CK G+++
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + ++G A V Y LI K G + A L ++ +G P +Y +I G
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +AF + E+ KG PN +T LI+ R EA EM E + P
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++++ +G +C + + E L+
Sbjct: 530 EVTYNVLIEG--HCKEGNTVRAFELLD 554
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 8/213 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G V L+ G G L +AK + ++MI G P++ + SLI CK GE
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y+ + G + T+ LI + A + EA +L +VE P Y
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT--E 178
+I+G + G AF E+ KG P+ Y LI+ GR EA ++ ++ +
Sbjct: 536 LIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595
Query: 179 MGLTPISRC------FDLVTDGLKNCGKHDLAE 205
L I C + + +GL G D AE
Sbjct: 596 QKLNEIEGCLPNVVTYTALINGLCKIGLMDKAE 628
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +V+ L A++++ +M G D + T+N I +CK+ V
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + G ADV TY L+ + K + +++ ++E G P + + ++ G
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++G AF +++K G P+ VY LI + G+ EA + M GL P
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ ++ D GK D+A
Sbjct: 390 DVTYSILIDSFCKRGKLDVA 409
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V L+ GL G ++ A+ + +M+ S P+ T+ ++ + G +E
Sbjct: 602 EGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEK 661
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++ V G A+ TY ILI K G I EA +L N+++ G +P Y+ II
Sbjct: 662 AIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 720
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
RRG +A + + +G P+ Y LI C G +A +M G+ P
Sbjct: 721 EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 780
Query: 184 ISRCFDLVTDG 194
++ + G
Sbjct: 781 NRATYNSLIHG 791
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +L+ G L+ A + KM + G + ++SLI CK G+
Sbjct: 381 MGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK 440
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +V Y LI K G + AFRL H + G +P +
Sbjct: 441 LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +A F E+ PN Y LI + G V A L EM E G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + + GL + G+
Sbjct: 561 LVPDTYTYRPLISGLCSTGR 580
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + V ++ ++GL + A ++ N + +G D+ T+ +L+ +CK E
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E EM + + G + L+ + K G I AF L++ + + G P +Y
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ + KG PN Y+ LI + G+ A ++L +MTE+G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + G GK A+ +
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSL 447
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF ++L++G G ++ A +++ MI G PD +++++I C+ G+++
Sbjct: 671 EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE 730
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++ S+ G D Y LI G + +AF L +++ G P + Y +I
Sbjct: 731 AIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 790
Query: 124 GA 125
G
Sbjct: 791 GT 792
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G NP + L+ G G L A ++ + M+++G P+ T+NSLI C
Sbjct: 738 MLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSS 797
Query: 61 VEFCVEMYYSVCKLGSC 77
V + Y+S CKL C
Sbjct: 798 VSSTAD-YFS-CKLNWC 812
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 80/206 (38%), Gaps = 4/206 (1%)
Query: 12 GRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV 71
G DLL+Q + +V M+ G P + T + ++ + + + + ++ +
Sbjct: 147 GFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEI 206
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
G DV Y ++ ++ + A ++ + G + + Y I+G + +
Sbjct: 207 VSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRV 266
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+A + + KG + Y TL+ + F + EM E G P +
Sbjct: 267 WEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNL 326
Query: 192 TDGLKNCGK----HDLAEKIEQLEVS 213
DGL+ G DL K+++ V+
Sbjct: 327 VDGLRKKGNIGSAFDLVNKVKKFGVA 352
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G +P ++ G L+ A ++ M+ +G +PD +N LI C +GE
Sbjct: 703 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 762
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILI 87
+ E+ + + G + +TY LI
Sbjct: 763 LTKAFELRDDMMRRGVKPNRATYNSLI 789
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P LV GL G + SA +VNK+ K G P L +N+LI ++CK G+
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G + TY ILI + K G +D A L + E G Y+
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F E+ G PN +YT+LI+ + G A EMT G
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
++P + F + GL C + +AE
Sbjct: 491 ISPNTYTFTALISGL--CHANRMAE 513
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ + G L+ A+ + N M +G P+ T++ LI++ CK G+++
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + ++G A V Y LI K G + A L ++ +G P +Y +I G
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +AF + E+ KG PN +T LI+ R EA EM E + P
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++++ +G +C + + E L+
Sbjct: 530 EVTYNVLIEG--HCKEGNTVRAFELLD 554
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G V L+ G G L +AK + ++MI G P++ + SLI CK GE
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y+ + G + T+ LI + A + EA +L +VE P Y
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G AF E+ KG P+ Y LI+ GR EA ++ ++
Sbjct: 536 LIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
CF + G G+ D A
Sbjct: 596 QKLNEMCFSALLHGYCKEGRLDDA 619
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ GL G ++ A+ + +M+ S P+ T+ ++ + G
Sbjct: 696 MVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 755
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ V G A+ TY ILI K G I EA +L N+++ G +P Y+
Sbjct: 756 IEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II RRG +A + + +G P+ Y LI C G +A +M G
Sbjct: 815 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874
Query: 181 LTPISRCFDLVTDG 194
+ P ++ + G
Sbjct: 875 VKPNRATYNSLIHG 888
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +V+ L A++++ +M G D + T+N I +CK+ V
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + G ADV TY L+ + K + +++ ++E G P + + ++ G
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++G AF +++K G P+ VY LI + G+ EA + M GL P
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ ++ D GK D+A
Sbjct: 390 DVTYSILIDSFCKRGKLDVA 409
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +L+ G L+ A + KM + G + ++SLI CK G+
Sbjct: 381 MGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK 440
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +V Y LI K G + AFRL H + G +P +
Sbjct: 441 LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +A F E+ PN Y LI + G V A L EM E G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + + GL + G+
Sbjct: 561 LVPDTYTYRPLISGLCSTGR 580
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ G G L +A ++ ++M +G P+ TF +LI +C +
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANR 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + + TY +LI K G AF LL +VE G P Y P
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRP 570
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +A F ++++ + N ++ L+ + GR +A + EM G
Sbjct: 571 LISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRG 630
Query: 181 LTPISRCFDLVTDG-LKNCGKHDLAEKIEQLE 211
+ C+ ++ G L+ + + + ++Q+
Sbjct: 631 VAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + V ++ ++GL + A ++ N + +G D+ T+ +L+ +CK E
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E EM + + G + L+ + K G I AF L++ + + G P +Y
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ + KG PN Y+ LI + G+ A ++L +MTE+G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + G GK A+ +
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSL 447
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 83/210 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L+ GL + G + A++ +N + + + F++L+ CK G
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGR 615
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ Y +LI + + LL + + G P LY
Sbjct: 616 LDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTT 675
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G AF + + +G PN YT LI + G +A EM
Sbjct: 676 MIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 735
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + D L + G + A ++ +
Sbjct: 736 SLPNQNTYACFLDYLTSEGNIEKAIQLHDV 765
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 80/206 (38%), Gaps = 4/206 (1%)
Query: 12 GRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV 71
G DLL+Q + +V M+ G P + T + ++ + + + + ++ +
Sbjct: 147 GFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEI 206
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
G DV Y ++ ++ + A ++ + G + + Y I+G + +
Sbjct: 207 VSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRV 266
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+A + + KG + Y TL+ + F + EM E G P +
Sbjct: 267 WEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNL 326
Query: 192 TDGLKNCGK----HDLAEKIEQLEVS 213
DGL+ G DL K+++ V+
Sbjct: 327 VDGLRKKGNIGSAFDLVNKVKKFGVA 352
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC 56
M ++G NP + L+ G G L A ++ + M+++G P+ T+NSLI C
Sbjct: 835 MLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++ ++ G + +++ +M QG P++ T+NS I+T K G+
Sbjct: 451 MPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQ 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + +L D TY I A SK G EA LL + G P Y
Sbjct: 511 WEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTA 570
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + GQ++ A ++ KG PN Y ++I CGRGG + +A + L E+ E
Sbjct: 571 AIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETA 630
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++L + CGK
Sbjct: 631 VAPDLMSYNL---AISACGK 647
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 10/224 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V D ++ G E++ ++++M +G P+ FNS I K G+
Sbjct: 311 MESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQ 370
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E VE+ V LG D +++ I A +K+G EA LL + P Y
Sbjct: 371 WEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNS 430
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + GQ++ A ++ KG PN I CG GR+ E L +M G
Sbjct: 431 AIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQG 490
Query: 181 LTPISRCFDLVTDGLKNCGKH-------DLAEKIEQLEVSLRSV 217
LTP ++ +K CGK DL K+++L ++ S+
Sbjct: 491 LTPNVITYN---SAIKTCGKGGQWEKALDLLAKMKELAMTPDSI 531
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + ++ G E A ++ KM + PD T+NS I K G
Sbjct: 486 MPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGR 545
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + G DV +Y I A K G + A LL + G P Y
Sbjct: 546 WKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNS 605
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK R G+++ A E+K P+ Y I+ CG+ GR+ EA + L EM G
Sbjct: 606 VIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEG 665
Query: 181 LTP 183
LTP
Sbjct: 666 LTP 668
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + G E A +++ +M +G P++ T+NS+I+ + GE
Sbjct: 556 MPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGE 615
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + D+ +Y + I A K G +EA LL + +G P Y
Sbjct: 616 WEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTS 675
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G+++ A + + G P Y+ I CG+GGR EA + EM + G
Sbjct: 676 AIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRG 735
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L+ + L+ + L + K
Sbjct: 736 LSHRNISNSLIVEALGDDAK 755
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 24 GYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEV-EFCVEMYYSVCKLGSCADVS 81
G E A +++ ++ +Q G P++ +NS IE C SG+ E V + + D
Sbjct: 158 GQWEKALELLREIPEQEGVSPNVFCYNSAIEA-CGSGDQWEIAVSLLREMADREVVPDEI 216
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+Y I A + G + LL + G P Y +I G + GQ+ +A +E+
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEM 276
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
KG P Y I CGR GR+ EA L +M G+TP +D +K CG
Sbjct: 277 SAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDA---AIKACG 331
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 77/179 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + +G + A +++ +M + PD ++NS IE K G+ E
Sbjct: 385 GLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMA 444
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + G +V + I I A + G E LL + G P Y IK
Sbjct: 445 LELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKT 504
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ GQ++ A +++K P+ Y + I C + GR+ EA L EM GLTP
Sbjct: 505 CGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTP 563
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 85/189 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+ P + ++ G E ++ +M G PD T+NS+I K G+
Sbjct: 206 MADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQ 265
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + +Y + I A ++G EA +L + G P Y
Sbjct: 266 WKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDA 325
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IK GQ++ + E+ +G PN + + I CG+GG++ +A L E+T +G
Sbjct: 326 AIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALG 385
Query: 181 LTPISRCFD 189
LTP + F+
Sbjct: 386 LTPDATSFN 394
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P ++ ++ +G + A +++ +M QG PD+ ++++ I+ G+
Sbjct: 276 MSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQ 335
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E V++ + G + + I A K G ++A LL + G P + +
Sbjct: 336 WETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNS 395
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G++ +A E+ K P+ Y + I CG+GG++ A +M G
Sbjct: 396 AIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKG 455
Query: 181 LTP 183
LTP
Sbjct: 456 LTP 458
Score = 70.5 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 3/177 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G + A ++ +M QG PD+ ++ + I+ K+G+ E VE+ + G +V TY
Sbjct: 544 GRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITY 603
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
+I A + G ++A LL L E P Y I +RG++++A E+
Sbjct: 604 NSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPA 663
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+G P+ YT+ I C G + +A L M G++P + + L ++ CGK
Sbjct: 664 EGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSL---AIEACGK 717
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G +P V + ++ + E A ++ +M + PD ++NS I+ + G+ E
Sbjct: 174 EGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWER 233
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + +G D TY +I K G EA +L + G P Y I+
Sbjct: 234 VIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIR 293
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
R G++ +A +++ +G P+ Y I CG GG++ + + L EM G+ P
Sbjct: 294 ACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAP 353
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+ F+ + CGK EK +L LR V
Sbjct: 354 NTIHFN---SAIVACGKGGQWEKAVEL---LREV 381
Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 3/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + ++ G E A ++ +M +G P++ + N I + G
Sbjct: 416 MPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGR 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G +V TY I K G ++A LL + E P Y
Sbjct: 476 WQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNS 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I +RG++ +A E+ +G P+ YT I G+ G++ A L +M G
Sbjct: 536 AIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKG 595
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
LTP ++ V +K CG+ EK L L+
Sbjct: 596 LTPNVITYNSV---IKACGRGGEWEKALDLLKELK 627
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 3/200 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++ G G + A ++ +M +G P+ ++N I +SG
Sbjct: 241 MPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGR 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE+ + G DV +Y I A G + + LL + G P +
Sbjct: 301 WKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNS 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + GQ++ A E+ G P+ + + I C + GR+ EA L EM
Sbjct: 361 AIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKR 420
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + ++ ++ CGK
Sbjct: 421 LKPDAISYN---SAIEACGK 437
>gi|341605781|gb|AEK82993.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605783|gb|AEK82994.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A LLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A ++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G V +LLV L G A ++V +M +G PD+ T+N LI CK G
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ ++ + G A V TY LI A+SK G + E +L V G P LY
Sbjct: 230 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 289
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D AF E++ K P+ Y TL+ GR EA + EMT+ G
Sbjct: 290 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 349
Query: 181 LTPISRCFDLVT 192
+ P DLVT
Sbjct: 350 IQP-----DLVT 356
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V L+ L G ++ ++ ++ +++G PDL +N+LI + SG
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + K D TY L+ + G +DEA +L+ + + G P Y
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G DA +E+ KG P Y LI + G+ +A N + EM E G
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419
Query: 181 LTPISRCFDLVTDGL 195
+TP + + +GL
Sbjct: 420 ITPDDSTYISLIEGL 434
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G G ++ A ++ M ++G + T+ SLI + K G+
Sbjct: 205 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 264
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G D+ Y LI + S +G ID AF ++ + + P Y
Sbjct: 265 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 324
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G G+ D+A E+ +G P+ Y TLI+ G +A EM G
Sbjct: 325 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 384
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL G+ D AE +
Sbjct: 385 FNPTLLTYNALIQGLCKNGQGDDAENM 411
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G + G L++A ++M+++G + T+N L+ + G E+ + G
Sbjct: 150 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 209
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY ILI K G + +A + N+ G Y +I ++GQ +
Sbjct: 210 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 269
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E +G P+ +Y LI G A + EM + + P ++ + GL
Sbjct: 270 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 329
Query: 196 KNCGKHDLAEKI 207
G+ D A K+
Sbjct: 330 CLLGRVDEARKL 341
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ G G ++ A ++ ++M+ +G P+ +N+LI C G+++ + + +
Sbjct: 114 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 173
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V+TY +L+ A+ G EA+ L+ + G P Y +I G + G A
Sbjct: 174 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 233
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + +G YT+LI + G+ E E G+ P ++ + +
Sbjct: 234 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 293
Query: 195 LKNCGKHDLAEKI 207
G D A +I
Sbjct: 294 HSTSGNIDRAFEI 306
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + L+ G G ++ A ++ N+M+ +G +P L T+N+LI+ +CK+G+
Sbjct: 345 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 404
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ M + + G D STY LI ++
Sbjct: 405 GDDAENMVKEMVENGITPDDSTYISLIEGLT 435
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGFNP + + L+QGL G + A+ MV +M++ G PD T+ SLIE + E
Sbjct: 380 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 6/151 (3%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TFN ++ +C +G+ +E+ + + + TY +I G + A ++ +
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98
Query: 107 VEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGG 164
E G P Y +I G + G+ D+A F E+ KG P +Y LI G
Sbjct: 99 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ A Y M E G+ ++L+ L
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHAL 189
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVE 62
+GF P V L+ GL G L+ A + +MIK GS P+ T+NSLI C+ G+++
Sbjct: 118 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 177
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + + GS DV TY L+ K +D+A+ LL+ + G P + ++
Sbjct: 178 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLM 237
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R + DA E++ K P Y T++ R + EA +++E EM
Sbjct: 238 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCP 295
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P F+++ GL C + +E +E +E + R
Sbjct: 296 PNVVSFNIMIRGL--CKVNRSSEAMELVEEARR 326
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 1/203 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G + + A ++ +++ +G PD+ T++ LI+ +CK G ++
Sbjct: 84 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 143
Query: 65 VEMYYSVCKLGSC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++ + K GSC + TY LI + G +DEA LL + E G +P Y ++
Sbjct: 144 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 203
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + DDA+ +++ KG PN +T+L+ R R +A + L EM +P
Sbjct: 204 GFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 263
Query: 184 ISRCFDLVTDGLKNCGKHDLAEK 206
++ + DG + + A K
Sbjct: 264 TVYTYNTILDGYCRVNQLEEARK 286
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 3/196 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL A A ++ +M+ G PD+ T+ +LI CKS + + + ++ + G
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 119
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKGAFRRGQFDDA 134
DV TY LI + K G + EA L +++ G P Y +I G R G+ D+A
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 179
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ G P+ YTTL+ + R +A + L +MT GLTP F + DG
Sbjct: 180 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDG 239
Query: 195 LKNCGKHDLAEKIEQL 210
L C ++ L++ + L
Sbjct: 240 L--CRENRLSDAVHIL 253
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 1/163 (0%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P T+NSLI +CK+ ++ + G D+ TY LI K+ D+A R+
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCG 161
LV G P Y+ +I G + G+ +A F IK PN Y +LI+
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
R G+ EA N L M E G +P + + +G + D A
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 214
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G +P V L+ G L+ A ++N+M ++G P++ TF SL++ +C+
Sbjct: 186 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + + V TY ++ + ++EA + + L E P +
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNI 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I+G + + +A E + + P+ +YTT+I + R + EA +M E
Sbjct: 304 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLE 361
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P V + ++ G LE A++ + + + P++ +FN +I +CK
Sbjct: 256 MRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNR 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
+E+ + DV Y +I + + +DEA R+ ++E+
Sbjct: 314 SSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P L+ GLL AG + A+ + N+M++ G P+ +N L+ +G E
Sbjct: 872 EGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTEN 931
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ +Y +LI + AG +++ L+E G P +Y +I
Sbjct: 932 VCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLID 991
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++A C F+E+K KG PN Y +LI G+ G+ EAA E+ G P
Sbjct: 992 GLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++ + G G D A
Sbjct: 1052 NVFTYNALIRGYSVSGSTDNA 1072
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +++Q L +AG L AK + KM PD T+ +L++ SG+
Sbjct: 274 MEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 333
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ ++ G ++ +Y ++ A+ + G +DEA + + E G +P Y
Sbjct: 334 SQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNS 393
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + FD A F+ + G PN + I G+ G+ ++A M G
Sbjct: 394 LISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 453
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V L G+ +A+++
Sbjct: 454 IVPDVAAANAVLSSLARSGRLGMAKRV 480
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ L +G L AK++ ++ G PD T+ +I+ K+ +
Sbjct: 449 MKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASK 508
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + + G DV LI + K G +EA++L H L E P Y
Sbjct: 509 ADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNT 568
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + E+ HPPN Y T++ + G A L MTE G
Sbjct: 569 LLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKG 628
Query: 181 LTPISRCFDLVTDGL 195
TP ++ V GL
Sbjct: 629 CTPDLSSYNTVMYGL 643
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 92/185 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++GL++ ++ A+ + +M + G PD T+N +++ + KS +E + + + + G
Sbjct: 779 LIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKG 838
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ +++A L +NL+ +G +P P Y P++ G + G+ DA
Sbjct: 839 YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAE 898
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G PN +Y L+ G +M E G+ P + + ++ D L
Sbjct: 899 NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTL 958
Query: 196 KNCGK 200
G+
Sbjct: 959 CTAGR 963
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A Q M +G PD+ N+++ ++ +SG + ++Y + +G D TY ++I
Sbjct: 442 AIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIK 501
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
SKA DEA ++VE G P +I ++ G+ ++A+ F ++K P
Sbjct: 502 CCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEP 561
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y TL++ GR G+ E + L EMT P ++ V D L G+ + A
Sbjct: 562 TNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCA 617
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P + L+ G L A + A ++ N M G P+ T I KSG+
Sbjct: 379 MKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 438
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G DV+ ++ +++++G + A R+ + L + G +P Y
Sbjct: 439 SLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTM 498
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + + D+A FFS++ G P+ +LI +GG+ EA ++ EM
Sbjct: 499 MIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMK 558
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++ + GL GK
Sbjct: 559 IEPTNGTYNTLLSGLGREGK 578
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+N + +V L G L+ A + ++M ++G P+ ++NSLI K+
Sbjct: 344 MVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADM 403
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + G + T+ + I K+G +A + ++ G P +
Sbjct: 404 FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANA 463
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G+ A F E+K G P+ YT +I C + + EA N+ +M E G
Sbjct: 464 VLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETG 523
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + D L GK + A K+
Sbjct: 524 CVPDVLALNSLIDTLYKGGKGNEAWKL 550
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + ++ L A + A Q++ KM G PD+ T +I+ +C +G
Sbjct: 239 MEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGR 298
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + D TY L+ +G + + +V DG+N Y
Sbjct: 299 LSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTA 358
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ D+A F E+K KG P + Y +LI+ + F A M G
Sbjct: 359 VVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACG 418
Query: 181 LTP 183
+P
Sbjct: 419 PSP 421
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 13/220 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G NP ++ +L+ L AG L ++++ G +PDL +N LI+ + KS
Sbjct: 939 MVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSER 998
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V ++ + K G ++ TY LI + KAG EA ++ L+ G P Y
Sbjct: 999 IEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNA 1058
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G D+A+ + + + + T LI+ A EM G
Sbjct: 1059 LIRGYSVSGSTDNAYAAYDCVAV-----GVSLKTALISGLVDENLINIAEGLFAEMKRRG 1113
Query: 181 LTPISRCFDLVTDGLKNCGK--------HDLAEKIEQLEV 212
P ++L+ D + + ++AE + QL +
Sbjct: 1114 CGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAEDLNQLTL 1153
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ + ++ GL+ + LE A + ++ +G P T+ L++ + K+G+
Sbjct: 834 MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGK 893
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + + Y IL+ AG + ++ +VE G NP Y
Sbjct: 894 MVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTV 953
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +D +F ++ G P+ +Y LI G+ R EA EM + G
Sbjct: 954 LIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKG 1013
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
+ P ++ + L GK + A+ E+L
Sbjct: 1014 IVPNLYTYNSLILHLGKAGKASEAAQMYEEL 1044
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ +G+ A ++ M++ G P + T++ L+ + K +V+ + + + G
Sbjct: 184 LIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARG 243
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y I I + +A DEA+++L + + G P + +I+ G+ DA
Sbjct: 244 VKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAK 303
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P+R Y TL+ CG G M G + V D L
Sbjct: 304 DVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDAL 363
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 364 CQVGRLDEA 372
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A Q+ NK G ++NSLI + ++ +++ + +LG D TY +++
Sbjct: 757 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 816
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A+ K+ I+E R+ + G+ Y II G + + + A + + +G P
Sbjct: 817 AMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 876
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
Y L+ + G+ V+A N EM E G P ++++ +G + G +
Sbjct: 877 TPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTE 930
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
++G +S ++ N M+ G + ++ ++ ++++ +C+ G ++ + ++ + + G +
Sbjct: 330 DSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQY 389
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+Y LI KA M D A L +++ G +P + I + GQ A + +
Sbjct: 390 SYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHM 449
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K KG P+ +++ R GR A E+ +MG++P + + ++ +K C K
Sbjct: 450 KSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMM---IKCCSKA 506
Query: 202 DLAEK 206
A++
Sbjct: 507 SKADE 511
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G + Q+ + M KQ ++ TF ++ + G + + + G + TY
Sbjct: 122 GRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTY 181
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI + K+G EA + +VEDG +P Y+ ++ ++ D +E++
Sbjct: 182 NGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEA 241
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PN YT I + G+ RF EA L +M + G P +V L + G+
Sbjct: 242 RGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSD 301
Query: 204 AEKI 207
A+ +
Sbjct: 302 AKDV 305
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L SA + M + G + T+N LI + KSG +E+Y ++ + G V TY
Sbjct: 157 GGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTY 216
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
+L+ + K +D LL+ + G P Y I+ + +FD+A+ +++
Sbjct: 217 SVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMED 276
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
G P+ +T +I + GR +A + +M
Sbjct: 277 SGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKM 309
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 2/198 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G+LN +E + + + +G + LI +CK + +++ LG
Sbjct: 709 LMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG 768
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+Y LI + +ID A L + G P Y I+ + + ++
Sbjct: 769 VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEML 828
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+E+ KG+ Y T+I+ + R +A + + G +P + + DGL
Sbjct: 829 RVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGL 888
Query: 196 KNCGKHDLAEKI--EQLE 211
GK AE + E LE
Sbjct: 889 LKAGKMVDAENLFNEMLE 906
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V L+ G G L+ A + M ++G P++ T+N+LI K
Sbjct: 56 MSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAY 115
Query: 61 -----VEFCVEMYYS---------VCKLGSCA----------------------DVSTYK 84
V EM + C + +C +V +Y
Sbjct: 116 RLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYT 175
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+I ++ ++G +DEA L + E G +P Y ++K R G+++ A C F ++ +
Sbjct: 176 TMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDE 235
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G P+ Y T+I MCGRGG F EA +EM G TP ++ + D + A
Sbjct: 236 GCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRA 295
Query: 205 EKI 207
+
Sbjct: 296 RDL 298
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + L++ G E A + M +G PDL T+N++I+ + G
Sbjct: 197 MKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGL 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D TY ++ A SK A LL + G P Y
Sbjct: 257 FAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNI 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ A + G +A F E+K GH PN ++ LI M GR G F EA +EM G
Sbjct: 317 LLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATG 376
Query: 181 LTP 183
P
Sbjct: 377 CVP 379
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +V + ++A Q++ +M P++ ++ ++I ++ +SG
Sbjct: 127 MKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGR 186
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ VE++ + +LG + TY L+ A ++ G ++A L + ++G P Y
Sbjct: 187 LDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNT 246
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G F +A F E++ KG P+R Y T++ + R A + L M G
Sbjct: 247 VIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAG 306
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
TP ++++ D G A +I
Sbjct: 307 CTPDLWTYNILLDAAGKAGSASEAMQI 333
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + ++ G A+ + +M ++G PD T+N++++ K
Sbjct: 232 MEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSR 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ TY IL+ A KAG EA ++ H L GH+P ++
Sbjct: 292 RGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+I R G F++A + E++ G PN Y L+ G +
Sbjct: 352 LINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGMY 397
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L A+++ M K G P + + +L+ K G ++ ++ ++ + G +V TY
Sbjct: 44 GKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTY 103
Query: 84 KILIPAVSK-AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
LI A +K A + + L + + G P Y ++ FD A E+K
Sbjct: 104 NTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMK 163
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
PN YTT+I GR GR EA EM E+G +P S ++ + G+++
Sbjct: 164 AVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYE 223
Query: 203 LA 204
A
Sbjct: 224 KA 225
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + + G + A + + + G P Y ++ G ++G +A+ F +K KG
Sbjct: 36 IISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKG 95
Query: 146 HPPNRPVYTTLITMCG-RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN Y TLI C R R + EM + G+ P ++ + + D A
Sbjct: 96 CSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTA 155
Query: 205 EKI 207
+I
Sbjct: 156 SQI 158
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 13/187 (6%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV--- 71
+L+ G+ G L+ A+Q+ N+M G P + TFN+LI+ +CK+GE+E ++Y +
Sbjct: 416 ILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIG 475
Query: 72 ------CKLGSCAD----VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+L AD ++ + ++ + ++G+I +A++LL L + G P Y +
Sbjct: 476 KNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVL 535
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + + AF F E+++KGH P+ Y TLI R R +A L +M + G
Sbjct: 536 INGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGC 595
Query: 182 TPISRCF 188
TP S +
Sbjct: 596 TPSSAVY 602
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+NP +L+ GL G + A +M ++M ++G P+ + ++ +C++ +
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G C D T L+ K G IDEAF LL ++G+ Y+ +I G
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
FR ++D+ + ++ G P+ +YT LI G A N L +MT+ GL+P
Sbjct: 316 LFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD 375
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ C++ + G + G D A + QLE+S
Sbjct: 376 TYCYNALIKGFCDVGLLDKARSL-QLEIS 403
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM-----------IKQGSDP--DLET 47
M + G +P + + L+ GL AG LE A+ + KM + QG+D D +
Sbjct: 437 MENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTAS 496
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+++E +C+SG + ++ + G D+ TY +LI KA I+ AF+L L
Sbjct: 497 LQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQ 556
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
GH+P Y +I G R + +DAF ++ G P+ VY L+T R G+
Sbjct: 557 LKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLS 616
Query: 168 EA 169
A
Sbjct: 617 VA 618
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 96/246 (39%), Gaps = 43/246 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P +++ GL A + +++N M G PD T N+L++ CK G+
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286
Query: 61 V---------------------------------------EFCVEMYYSVCKLGSCADVS 81
+ E+C +M+ K G DV
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF----KAGIEPDVV 342
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
Y ILI + GM+D A +L+++ + G +P Y +IKG G D A EI
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
P YT LI R G EA +M +G +P F+ + DGL G+
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGEL 462
Query: 202 DLAEKI 207
+ A +
Sbjct: 463 EEARHL 468
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ ++G L+ GL A + ++ KM K G +PD+ + LI C+ G V++
Sbjct: 300 EGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDY 359
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ M + + G D Y LI G++D+A L + ++ P Y +I
Sbjct: 360 ALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILIC 419
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G D+A F++++ G P+ + LI + G EA + +M E+G P
Sbjct: 420 GMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNP 478
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L++G G ++ A M+N M ++G PD +N+LI+ C G
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K TY ILI + + G++DEA ++ + + G +P +
Sbjct: 392 LDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP---------PNRPVYT-TLITMCGR---GGRFV 167
+I G + G+ ++A F +++I +P +R + T +L TM R G +
Sbjct: 452 LIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLIL 511
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGL 195
+A LM++ + G+ P ++++ +G
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGF 539
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TF+ LI KSG E VE + + G DV TY ++ + + + A + + +
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
++ +NP + + ++ G + G+ DDA F E+ KG PPN +YT +++ + R
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ L M G P S + + DG G+ D A + QL
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 82/188 (43%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ +G E A + KM G PD+ T+NS++ + + + +Y + KL
Sbjct: 136 VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL 195
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+ +T+ IL+ + K G D+A ++ + + G P +Y I+ G + + DD
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ +K+ G P+ L+ + G+ EA L + G + + + DG
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315
Query: 195 LKNCGKHD 202
L ++D
Sbjct: 316 LFRAKRYD 323
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L +G + A +++ ++ G PD+ T+N LI CK+ + +++ + G
Sbjct: 500 MVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKG 559
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI + ++AFR+L +V++G P ++Y ++ + R+G+ AF
Sbjct: 560 HSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAF 619
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+ + ++ P L G +A L+EM
Sbjct: 620 SLWLKY-LRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMN 660
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 11/212 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D G P + ++L+ G A + A ++ ++ +G PD T+ +LI+ +
Sbjct: 520 LADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDR 579
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + K G + YK L+ + G + AF L + PS
Sbjct: 580 EEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS----LPSQEDE 635
Query: 121 IIKGA---FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+K A F +G+ + A E+ K + YT + + R EA + +
Sbjct: 636 TLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLK 695
Query: 178 E--MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
E M + P S C L+ +GL G ++A I
Sbjct: 696 ECQMDVNPPS-CVMLI-NGLCKDGNLEMAVDI 725
>gi|224576661|gb|ACN57004.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ G + Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTPISRCFDLVTDG 194
G+TP + CF ++ G
Sbjct: 192 KGITPTAACFRALSTG 207
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 155
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y G S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P LV+GL G + A +VN++ K G+ P L +N+LI ++CK G+
Sbjct: 322 MIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK 381
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G CA+ TY ILI + + G +D A L ++ G Y
Sbjct: 382 FDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNS 441
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A FF E+ KG P YT+LI+ G+ EA EMT G
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501
Query: 181 LTPISRCFDLVTDGL 195
+ P + F + L
Sbjct: 502 IAPNTYTFTTLISAL 516
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +L+ G L++A + KMI G + +NSLI CK G
Sbjct: 392 MGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGN 451
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + G V +Y LI G + EAFRL H + G P +
Sbjct: 452 LSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I FR + DAF F E+ + PN Y +I + G V+A L +M + G
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + + L + G+
Sbjct: 572 LVPDTYTYRPLISSLCSTGR 591
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ L AG ++ A+ + +M+ S P+ T+ ++ + + G
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGS 766
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V+++ + K G A+ +Y IL+ K G ++EA +LL ++++ P Y+
Sbjct: 767 MEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST 825
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II RRG D A F+ + KG P+ Y LI C G +A +M G
Sbjct: 826 IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG 885
Query: 181 LTP 183
+ P
Sbjct: 886 VKP 888
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V L+ G N G L A ++ ++M +G P+ TF +LI + ++
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + + TY ++I K G +AF LL+ +V+ G P Y P
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +A F ++ + N Y+ L+ + GR +A EM + G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641
Query: 181 LTPISRCFDLVTDG 194
+ C+ ++ DG
Sbjct: 642 VDMDLVCYAVLIDG 655
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + +++ AK+M+ +M + SD ++ +N LI +CK+ V
Sbjct: 223 GIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEA 280
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + + G A TY L+ + K + ++ ++E G P + + +++G
Sbjct: 281 VEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R+G+ DAF + +K G P+ VY LI + G+F EA EM E GL
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ ++ D GK D A
Sbjct: 401 DVTYSILIDSFCRRGKLDTA 420
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G V + L+ G G L +A ++MI +G P + ++ SLI C G++
Sbjct: 431 GIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEA 490
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+Y+ + G + T+ LI A+ +A + +AFRL ++E P Y +I+G
Sbjct: 491 FRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G AF +++ KG P+ Y LI+ GR EA ++ ++
Sbjct: 551 HCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN 610
Query: 185 SRCFDLVTDG 194
C+ + G
Sbjct: 611 EMCYSALLHG 620
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV GL E ++++MI+ G P +SL+E + + G+V ++ V K+G
Sbjct: 302 LVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG 361
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ + Y LI ++ K G DEA L + E G Y+ +I RRG+ D A
Sbjct: 362 AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAI 421
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ + G Y +LI + G A ++ EM + GL P + + G
Sbjct: 422 HFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGY 481
Query: 196 KNCGK 200
N GK
Sbjct: 482 CNKGK 486
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P ++ G AG ++ A + + MI +G P++ T+ +LI +CK+G
Sbjct: 672 MHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGL 731
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + S + TY + +++ G +++A +L HN + G Y
Sbjct: 732 MDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL-HNDMLKGLLANTVSYNI 790
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + G+ ++A E+ P+ Y+T+I C R G A + M G
Sbjct: 791 LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKG 850
Query: 181 LTPISRCFDLVTDG 194
L P + ++ + G
Sbjct: 851 LKPDTLAYNFLIYG 864
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ GL + A ++ N +I++G T+ +L+ +CK E E + + +
Sbjct: 265 NVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIE 324
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG + L+ + + G + +AF L++ + + G P +Y +I + G+FD+
Sbjct: 325 LGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDE 384
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
A F E+ KG N Y+ LI R G+ A ++L +M G+
Sbjct: 385 AELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGI 432
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 85/218 (38%), Gaps = 35/218 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P +++++G G A +++N+M+++G PD T+ LI ++C +G
Sbjct: 532 MLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGR 591
Query: 61 V------------------EFCVE-MYYSVCK-------LGSC---------ADVSTYKI 85
V E C + + CK LG C D+ Y +
Sbjct: 592 VCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAV 651
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI K F LL N+ + P +Y +I G + G AF + + +G
Sbjct: 652 LIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG 711
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
PN YTTLI + G +A EM TP
Sbjct: 712 CTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTP 749
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 1/192 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G L A + +M+K+G D DL + LI+ K + + ++
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y +I SKAG + +AF + ++++G P Y +I + G D A
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E+ + PN Y + R G +A +M + GL + ++++ G
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGF 795
Query: 196 KNCGKHDLAEKI 207
G+ + A K+
Sbjct: 796 CKLGRVEEATKL 807
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG ++LV+G G +E A +++++MI PD T++++I C+ G ++
Sbjct: 779 KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDG 838
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E + ++ G D Y LI AG + +AF L +++ G P + + +
Sbjct: 839 AIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSH 898
Query: 124 GAFRR 128
GA R+
Sbjct: 899 GASRK 903
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G +E A Q+ N M+K G + ++N L+ CK G VE ++ + D
Sbjct: 761 LAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPD 819
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
TY +I + G +D A ++ G P Y +I G G+ AF
Sbjct: 820 CITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRD 879
Query: 140 EIKIKGHPPNRPVYTTL 156
++ +G PN+ + +L
Sbjct: 880 DMIRRGVKPNQATHKSL 896
>gi|194705728|gb|ACF86948.1| unknown [Zea mays]
gi|414591270|tpg|DAA41841.1| TPA: fertility restorer [Zea mays]
Length = 563
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC-KSGE 60
S G P V + L+ L+ AG A+ + + M+ G P+ +FN L++ ++ +
Sbjct: 87 SSAGVPPSVLCYNTLLNALVEAGRAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTAD 146
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G DV T+ L+ + +AG +DEA+ +L ++++G P Y P
Sbjct: 147 FHLAYDQIHAMRRHGLLPDVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTP 206
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I++G R+GQ ++A ++ G PPN Y LI RF E L E+ G
Sbjct: 207 IVQGYCRQGQIEEATNLIGFMEDAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKG 266
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
+ +++ D L GK +A E ++Q E
Sbjct: 267 HELSTVTYNIYMDAL---GKKGMAKEALKQFE 295
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V LV GL AG L+ A +++ M+++G P + T+ +++ C+ G+
Sbjct: 157 MRRHGLLPDVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQ 216
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G + TY +LI A+ E ++L + GH Y
Sbjct: 217 IEEATNLIGFMEDAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNI 276
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ ++G +A F ++ KG P + ++ RF +A + L T++
Sbjct: 277 YMDALGKKGMAKEALKQFEALQCKGLHPTAFTLSIILNCLCCTSRFSQAISILERSTDLN 336
Query: 181 LTPISRCFDLVTDGLKNCGK 200
++ V L + G+
Sbjct: 337 FCAAVVAYNTVMSRLCDMGR 356
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+D F V + ++ L + G + +++ MIK+ P+ T N I ++C + ++
Sbjct: 333 TDLNFCAAVVAYNTVMSRLCDMGRWPAVLELLADMIKKCIIPNTRTLNIFIHSLCIADKL 392
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAP 120
+++ VC G A+ TY LI + G EA + + E + P Y
Sbjct: 393 SVAMKL---VCNQGFPANAVTYNTLIHSFYLRGEAYEADNMFAYMTEVANIAPDEVTYTI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R+G+FD A FF E ++ + T L+ R R N L+ E+
Sbjct: 450 MVDGLCRQGKFDKATDFFKESLRNRLRLSKDLLTALLNGLARSDR---NTNILVVFQEIE 506
Query: 181 LTPISRCFDLVTDGLKN 197
RC+ + D +++
Sbjct: 507 RQGFVRCYLIFGDTVRS 523
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF+ + L+ LL +G A +M +M+ +G P L+TF++L+ K +
Sbjct: 185 MREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRD 244
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + LG ++ TY I I + +AG IDEA R++ + +DG P Y
Sbjct: 245 TETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI---TMCGRGGRFVEAANYLMEMT 177
+I G+ DDA F ++K H P+R Y T++ + CG GR E + EM
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKE---FWSEME 361
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLA 204
G P F ++ + L G D A
Sbjct: 362 ADGYAPDVITFTILVNALCKAGNIDEA 388
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L++G L E A + +M G PD+ T+N L++ KSG++
Sbjct: 785 GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINEL 844
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y + + T+ I+I + K+ +D+A L ++LV +P P Y P++ G
Sbjct: 845 FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ ++A F E+ G PN +Y LI G+ G A M G+ P
Sbjct: 905 LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964
Query: 185 SRCFDLVTDGLKNCGKHDLA----EKIEQLEVSLRSV 217
+ + + L G+ D A EK++Q + L S+
Sbjct: 965 LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSI 1001
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +L+ L AG L+ A ++ KM PD T+ ++++ G+
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGD 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + + G DV T+ IL+ A+ KAG IDEAF LL + + G P Y
Sbjct: 350 LGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNT 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + DDA F+ ++ G P Y I G+ GR +A +M G
Sbjct: 410 LISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG 469
Query: 181 LTP 183
+ P
Sbjct: 470 IAP 472
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL +G LE AK++ +M+ G P+ +N LI K+G+V E++ + + G
Sbjct: 901 LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ +Y L+ + +AG +D+A L + G Y +I G R + ++A
Sbjct: 961 IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEAL 1020
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E++ +G P+ Y +LI G G +A E+ +GL P ++ + G
Sbjct: 1021 TLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080
Query: 196 KNCGKHDLAEKI 207
G D A +
Sbjct: 1081 SMSGNSDSAYAV 1092
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + ++ L AG ++ A +++ +M G PD+ T+ LI+ +C +G+
Sbjct: 255 MESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGK 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + D TY ++ S G + + DG+ P +
Sbjct: 315 LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTI 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G D+AF ++ +G PN Y TLI+ R R +A + M +G
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLEV 212
+ P + + L D G+ D A E E++++
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKI 467
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + + L G L AK + N++ G PD T+N +++ K+G+
Sbjct: 465 MKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQ 524
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + D+ LI + KAG +DEA+++ L + P Y
Sbjct: 525 VDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNT 584
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + GQ A F+ + G PPN + T++ + A L +MT M
Sbjct: 585 LIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN 644
Query: 181 LTPISRCFDLVTDGL 195
P F+ + GL
Sbjct: 645 CMPDVLTFNTIIHGL 659
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GLL L+ A + N M G P T+ I+ KSG
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGR 454
Query: 61 VEFCVEMY-------------------YSVCKLGS----------------CADVSTYKI 85
+ +E + YS+ ++G D TY +
Sbjct: 455 SDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNM 514
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ SKAG +DEA LL ++ E+ P + +I ++ G+ D+A+ F +K
Sbjct: 515 MMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMK 574
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P Y TLI G+ G+ A MT G P + F+ + D L + DLA
Sbjct: 575 LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLAL 634
Query: 206 KI 207
K+
Sbjct: 635 KM 636
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V +LL+ +G + ++ +MI P+ T N +I + KS
Sbjct: 816 MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNS 875
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++Y + TY L+ + K+G ++EA L +V+ G P ++Y
Sbjct: 876 LDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNI 935
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A F + +G P+ YT+L+ GR +A +Y ++ + G
Sbjct: 936 LINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995
Query: 181 LTPISRCFDLVTDGL 195
L S ++L+ DGL
Sbjct: 996 LYLDSIAYNLMIDGL 1010
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 2/189 (1%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
+ G L K+ ++M G PD+ TF L+ +CK+G ++ + + K G ++
Sbjct: 346 DCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLH 405
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY LI + + +D+A L +N+ G P Y I + G+ D A F ++
Sbjct: 406 TYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKM 465
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
KI+G PN + GR EA + GL P S ++++ G+
Sbjct: 466 KIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQV 525
Query: 202 DLAEKIEQL 210
D E IE L
Sbjct: 526 D--EAIELL 532
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++L+ G G + +A ++ +M+++G PDL+++ SL+ +C++G
Sbjct: 921 MVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGR 980
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + + G D Y ++I + ++ I+EA L + G NP Y
Sbjct: 981 VDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNS 1040
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + A + E++ G PN Y LI G A M G
Sbjct: 1041 LILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGG 1100
Query: 181 LTPISRCF 188
+P + F
Sbjct: 1101 CSPNTGTF 1108
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++++ L+ + L+ A + ++ P T+ L++ + KSG +E E+
Sbjct: 858 PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKEL 917
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G + + Y ILI K G ++ A L +V +G P Y ++
Sbjct: 918 FEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCE 977
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ DDA +F ++K G + Y +I GR R EA EM G+ P
Sbjct: 978 AGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINP 1033
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D P V + L+ GL G ++ A ++ M G P+ TFN++++ +CK+ E
Sbjct: 570 LKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDE 629
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++M Y + + DV T+ +I + + +A L H + + P
Sbjct: 630 VDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCT 688
Query: 121 IIKGAFRRGQFDDAF 135
++ G + G +DAF
Sbjct: 689 LLPGVVKNGLMEDAF 703
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ P + + L+ L AG ++ A +M ++ P + T+N+LI + K G+
Sbjct: 535 MSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQ 594
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ S+ G + T+ ++ + K +D A ++L+ + P +
Sbjct: 595 VQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNT 654
Query: 121 IIKGAFRRGQFDDAFCFFSEIK 142
II G + DA F ++K
Sbjct: 655 IIHGLVIEKRVSDAIWLFHQMK 676
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
M N++IK+ DL T+ + + + G + + + + G + +Y LI +
Sbjct: 150 MQNQIIKR----DLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
++G+ EA + +V +G P ++ ++ +R + E++ G PN
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
YT I + GR GR EA + M + G P + ++ D L GK D A ++
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMEL 321
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++ G +G+ + + +M KM +G PD TF+S + ++CK G
Sbjct: 293 MVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGR 352
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G D+ +Y IL+ + G + L H++ + G
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI 412
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG D+A F+E++ +G PN Y+TLI+ R GR +A +M +G
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + + + G C DL + E
Sbjct: 473 IEPNTAVYHSLIHGF--CMHGDLVKAKE 498
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V + ++ G G + A + N+M+++G PD+ T+NS+++ +CK+ ++
Sbjct: 229 SPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEF 288
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + G D TY +I S +G E+ ++ + G P ++ +
Sbjct: 289 VLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLC 348
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ DA F + KGH P+ Y+ L+ GRF + N M + G+
Sbjct: 349 KHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCH 408
Query: 187 CFDLVTDGLKNCGKHDLA 204
C +++ G D A
Sbjct: 409 CINILISAHAKRGMMDEA 426
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 96/201 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P ++++ GLL AG +AK+M ++MI G+ D++T+ L++ +C++
Sbjct: 609 MLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDL 668
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + + D++ +I A+ K +EA L + G P S Y
Sbjct: 669 TDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGV 728
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + G ++A FS ++ G P+ + +I M + G V+A Y+ ++
Sbjct: 729 MIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTI 788
Query: 181 LTPISRCFDLVTDGLKNCGKH 201
++ + L+ + GKH
Sbjct: 789 ISLEASTTSLLMSLFSSKGKH 809
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + LV G +G ++ + +M+ + P T+N +++ + ++G
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M++ + G+ D+ TYKIL+ + + + DEA L H L ++
Sbjct: 634 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 693
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ + ++A F+ I G PN Y +I + G EA M + G
Sbjct: 694 MINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753
Query: 181 LTPISRCFD 189
P SR +
Sbjct: 754 CAPSSRLLN 762
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 1/192 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSGEVEF 63
G P L+ G G L AK+ +++M+ +G P++ F+S+I ++C G V
Sbjct: 472 GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMD 531
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ V +G + T+ LI G +++AF +L +V G P ++
Sbjct: 532 AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVS 591
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DD F E+ K P Y ++ R GR A EM + G
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651
Query: 184 ISRCFDLVTDGL 195
+ ++ GL
Sbjct: 652 DIDTYKILLKGL 663
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS-CA-DVSTYK 84
E+ ++++M + PD ++N++I+++C + ++M + K G C+ DV ++
Sbjct: 177 EAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 236
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+I K G + +A L + +V+ G P Y I+ + D A ++ K
Sbjct: 237 TVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDK 296
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G P+ Y +I G + E+A +MT GL P + F L G+ A
Sbjct: 297 GVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDA 356
Query: 205 EKIEQ 209
E+I Q
Sbjct: 357 EEIFQ 361
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 7/211 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G L A + ++MI G +P+ ++SLI C G+
Sbjct: 433 MQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGD 492
Query: 61 V----EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ EF EM + K ++ + +I ++ G + +A + + ++ G P
Sbjct: 493 LVKAKEFISEM---MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIV 549
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ +I G G+ + AF + G P+ TL++ + G+ + EM
Sbjct: 550 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREM 609
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + +++V DGL G+ A+K+
Sbjct: 610 LHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V V GL GY++ A ++ +M+ +G P++ T SLI+ +CK G
Sbjct: 242 MVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
E ++ + K S +V TY ++I K G + A LL +VE G P + Y
Sbjct: 302 TERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R G FD AF +++K++G PN Y +I + G+ +A L T
Sbjct: 362 TLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQ 421
Query: 180 GLTP 183
GL P
Sbjct: 422 GLCP 425
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+ ++V+ G + +M++ G+ P++ + + ++ +CK G
Sbjct: 207 MWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGY 266
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG-HNPFPSLYA 119
V+ + + G +V T+ LI + K G + AFRL LV+ + P Y
Sbjct: 267 VKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYT 326
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ A + +G PN YTTLI RGG F A + +M
Sbjct: 327 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLE 386
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
G P ++ + G GK A K+ ++ S
Sbjct: 387 GFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATS 420
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 2/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G G + A +++NKM +G P++ T+N++I CK G+
Sbjct: 348 MVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ G C D TY +LI K G I A L + + E+ +P Y
Sbjct: 408 IQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTT 467
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II ++ Q + + F + G P + YT++I R G+ A M + G
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHG 527
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P + + GL C + L E E L
Sbjct: 528 CLPDPITYGALISGL--CKESRLEEARALFETML 559
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + P V +++ G G L A+ ++ +M++QG P+ T+ +LI+ C+ G
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGS 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G ++ TY +I K G I +A+++L G P Y
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTM 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G A F+++ P+ YTT+I M + + ++ + +G
Sbjct: 433 LITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + G GK A K+
Sbjct: 493 LVPTKQTYTSMIAGYCRVGKSTSALKV 519
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 86/226 (38%), Gaps = 39/226 (17%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE------------ 62
+L GL + A+Q + M G PD +F +L+ C+ G E
Sbjct: 154 VLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRALVLGCCQEGRFEEADALLAAMWRE 210
Query: 63 ---------------FCVE--------MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
FC + ++ + ++G+ +V Y + + K G + +A
Sbjct: 211 GFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQA 270
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIKIKGHPPNRPVYTTLIT 158
F +L +V G P + +I G + G + AF F +K + PN YT +I
Sbjct: 271 FHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIG 330
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ G+ A L M E GL P + + + DG G D A
Sbjct: 331 GYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRA 376
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + + ++ G G ++ A +++ QG PD T+ LI CK G
Sbjct: 383 MKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGH 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++++ + + D+ TY +I + ++++ +L + G P Y
Sbjct: 443 ITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTS 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ A F + G P+ Y LI+ + R EA M +
Sbjct: 503 MIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKH 562
Query: 181 LTP 183
+ P
Sbjct: 563 MVP 565
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P V ++LV GL G ++ A+ ++ MIKQG D ++ T+NSL++ +
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ ++ + G DV +Y I+I + K M+DEA L + P Y +I
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA+ +E+ +G P + Y++L+ + + +A + ++ + G+ P
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP 447
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ ++ DGL G+ A+ + Q
Sbjct: 448 NIYTYTILVDGLCKNGRLKDAQAVYQ 473
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V+ +++ GL ++ A + +M + P+ T+NSLI+ + K G
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G ADV TY L+ A+ K +D+A L+ + + G P Y
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA + ++ IKG+ + +Y ++ + G F EA + + +M + G
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + L K+D A K+
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKL 541
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + L+ GLL G + A +VN+M +G D+ T++SL++ +CK+ +
Sbjct: 370 MHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQ 429
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G ++ TY IL+ + K G + +A + +L+ G++ +Y
Sbjct: 430 VDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G FD+A S+++ G P+ Y TL+ + +A L EM G
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + + + L+ G A + N M ++G PD+++++ +I +CK+
Sbjct: 300 MIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKM 359
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V ++ + + TY LI + K G I +A+ L++ + G Y+
Sbjct: 360 VDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSS 419
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + Q D A ++IK +G PN YT L+ + GR +A ++ G
Sbjct: 420 LLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKG 479
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ ++++ +GL G D A
Sbjct: 480 YHLDVKMYNVMVNGLCKEGLFDEA 503
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + ++L+ + G+L A ++ K+ K G PD T +LI+ +C +G+
Sbjct: 90 MELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGK 149
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + V G D +Y LI + K G A ++L + P +Y
Sbjct: 150 VREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNT 209
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + A SE+ +K P+ YTTLI C GR EA +M
Sbjct: 210 IIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKN 269
Query: 181 LTPISRCFDLVTDGL 195
+ P F+++ DGL
Sbjct: 270 IKPDVYTFNILVDGL 284
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+P L++GL G + A + +I +G D ++ +LI +CK+GE
Sbjct: 129 GFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAA 188
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + L +V Y +I ++ K ++ A L ++ P Y +I G
Sbjct: 189 LQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYG 248
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ +A F+++ +K P+ + L+ + G +A N L M + G+
Sbjct: 249 CLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSN 308
Query: 185 SRCFDLVTDG 194
++ + DG
Sbjct: 309 IVTYNSLMDG 318
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V +LV L G + AK M+ M+KQG PD+ T++SL++ C E
Sbjct: 260 MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNE 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ +LG +Y I+I + K M+DEA L + G P Y
Sbjct: 320 VNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A+ E+ G P + Y +LI + + +A + ++ + G
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P ++++ DGL G+ A+ + Q
Sbjct: 440 IQPSMYTYNILIDGLCKGGRLKNAQDVFQ 468
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++ GL ++ A + +M +G PD T+NSLI+ +CK G
Sbjct: 330 MSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGR 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G AD+ TY LI + K ID+A L+ + + G P Y
Sbjct: 390 ISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F ++ IKG+ N Y +I + G F EA L +M G
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ + L +++ AEK+
Sbjct: 510 IIPDAVTYETIIRALFRKDENEKAEKL 536
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ GL G + A Q+V++M G D+ T+NSLI+ +CK+
Sbjct: 365 MCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHH 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G + TY ILI + K G + A + +L+ G++ Y
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNI 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G F++A S+++ G P+ Y T+I R +A L EM G
Sbjct: 485 MINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544
Query: 181 L 181
L
Sbjct: 545 L 545
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P V + L+ G G L+ A + ++M+ + +PD+ TF+ L++ +CK G
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M + K G DV TY L+ +++A + + G P Y
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F E+ KG P+ Y +LI + GR A + EM G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + D L C H + + I
Sbjct: 405 IPADILTYNSLIDVL--CKNHHIDKAI 429
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 2/213 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++LV + G + A + K++K G P TFN+LI IC +G+++
Sbjct: 88 KGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKE 147
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + V LG D +Y+ LI + K G A ++L + N +Y II
Sbjct: 148 ALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIIN 207
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ DA+ +SE+ K P+ + +LI G+ EA EM + P
Sbjct: 208 SLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINP 267
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
F ++ D L C ++ L V ++
Sbjct: 268 DVYTFSILVDAL--CKDGNITRAKNMLAVMMKQ 298
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K N V ++++ L + A Q+ ++MI + PD+ TFNSLI C G+++
Sbjct: 193 KLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKE 252
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + DV T+ IL+ A+ K G I A +L +++ G P Y+ ++
Sbjct: 253 AFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMD 312
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + A FS + G P+ Y +I G+ EA + EM G+ P
Sbjct: 313 GYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + DGL G+ A ++
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQL 396
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+ L+ GL G +A QM+ K+ + + D+ +N +I ++CK V
Sbjct: 159 GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDA 218
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + DV T+ LI G + EAF L H +V NP ++ ++
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDA 278
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A + + +G P+ Y++L+ +A + M+ +G+ P
Sbjct: 279 LCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPH 338
Query: 185 SRCFDLVTDGL 195
+ ++++ +GL
Sbjct: 339 AHSYNIMINGL 349
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M+ S+ K G +++TY L+ + G + E LL +V +G +P +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ D A FS+++ +G P+ Y T+I + + GR +A Y +M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P + ++ + L K D A+++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M+ G P V ++L++GL + + A +++ M G D PD+ ++ ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+++ Y+ + G +V TY +I A+ KA +D+A +L ++V++G P Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A F ++ G P+ Y +L+ + GR EA MT+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 MGLTP 183
GL P
Sbjct: 333 RGLKP 337
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ +P + L+ L + AK+++ +M+ +G D FNS+I++ CK G
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G D+ TY LI AG +DEA +LL ++V G P Y
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E++ G P+ Y ++ + R A + +TE G
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 615 TQLELSTYNIILHGL 629
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G P+ F+ LI K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D TY +I + K+G +++A R ++++ +P +Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++D A E+ +G + + ++I + GR +E+ M +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + + DG GK D A K+ VS+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Query: 3 DKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
D G PP V ++ G G L+ A ++M+ +G P++ T++S+I +CK+ +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +E+ S+ K G + TY ++ +G EA L + DG P Y +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + G+ +A F + +G P Y TL+ G VE L M G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P F ++ GK D A
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQA 393
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A + +MI + P +NSLI ++C +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G C D + +I + K G + E+ +L +V G P Y+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + + G P+ Y TLI + R +A EM G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 580 VSPDIITYNIILQGL 594
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G AG ++ A +++ M+ G PD T+N+LI CK +E
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D+ TY I++ + + A L + E G S Y I+ G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D+A F + + + +I + GR EA + ++ GL P
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 185 SRCFDLVTDGL 195
R + L+ + L
Sbjct: 689 VRTYSLMAENL 699
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G +E A + +M G PD+ T+N +++ + ++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y + + G+ ++STY I++ + K + DEA R+ NL +
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ + G P+ Y+ + G E + + M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 181 LTPISRCFDLVTDGL 195
T SR + + L
Sbjct: 720 CTANSRMLNSIVRKL 734
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS-VCKLGSCADVS 81
AG L+ + +IK+G D F +++ +C +++ + +LG +V
Sbjct: 104 AGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFS 139
+Y IL+ + EA LL + +DG + P + Y +I G F+ G D A+ +
Sbjct: 164 SYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
E+ +G PN Y+++I + +A L M + G+ P R ++ + G + G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 200 K 200
+
Sbjct: 284 Q 284
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL +AK++ + + G+ +L T+N ++ +CK+
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + T+ I+I A+ K G DEA L L +G P Y+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G N + +++ + G A YL + E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M+ S+ K G +++TY L+ + G + E LL +V +G +P +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ D A FS+++ +G P+ Y T+I + + GR +A Y +M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P + ++ + L K D A+++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M+ G P V ++L++GL + + A +++ M G D PD+ ++ ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+++ Y+ + G +V TY +I A+ KA +D+A +L ++V++G P Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A F ++ G P+ Y +L+ + GR EA MT+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 MGLTP 183
GL P
Sbjct: 333 RGLKP 337
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ +P + L+ L + AK+++ +M+ +G D FNS+I++ CK G
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G ++ TY LI AG +DEA +LL ++V G P Y
Sbjct: 495 VIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E++ G P+ Y ++ + R A + +TE G
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 615 TQLELSTYNIILHGL 629
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Query: 3 DKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
D G PP V ++ G G L+ A ++M+ +G P++ T+NS+I +CK+ +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAM 250
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +E+ S+ K G + TY ++ +G EA L + DG P Y +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + G+ +A F + +G P Y TL+ G VE L M G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P F ++ GK D A
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQA 393
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G P+ F+ LI K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D TY +I + K+G +++A R ++++ +P +Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++D A E+ +G + + ++I + GR +E+ M +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + + DG GK D A K+ VS+
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A + +MI + P +NSLI ++C +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G C D + +I + K G + E+ +L +V G P Y+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + + G P+ Y TLI + R +A EM G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 580 VSPDIITYNIILQGL 594
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G AG ++ A +++ M+ G PD T+N+LI CK +E
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D+ TY I++ + + A L + E G S Y I+ G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D+A F + + + +I + GR EA + ++ GL P
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 185 SRCFDLVTDGL 195
R + L+ + L
Sbjct: 689 VRTYSLMAENL 699
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G +E A + +M G PD+ T+N +++ + ++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y + + G+ ++STY I++ + K + DEA R+ NL +
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ + G P+ Y+ + G E + + M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 181 LTPISRCFDLVTDGL 195
T SR + + L
Sbjct: 720 CTANSRMLNSIVRKL 734
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL +AK++ + + G+ +L T+N ++ +CK+
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + T+ I+I A+ K G DEA L L +G P Y+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G N + +++ + G A YL + E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 14/186 (7%)
Query: 11 RGRDLLVQGLLNAGYLESAKQ-------MVNKMIKQGSD---PDLETFNSLIETICKSGE 60
RGR + GL N + A+ N+M + G+D P+L T+ LI + C +G
Sbjct: 48 RGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGR 106
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL-LHNLVEDGHNPFPSLYA 119
++ +V K G D + L+ + +A + L + + G P Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
++KG + +A + G PP+ YTT+I + G +A EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 178 EMGLTP 183
+ G+ P
Sbjct: 227 DRGILP 232
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ ++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTY 94
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIK 142
ILI + AG +D F L N+++ G + P++KG + DA +
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
G PN Y L+ R EA L M + G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDG 192
>gi|341605761|gb|AEK82983.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A LLH ++++G P Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSI 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEA 176
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A ++++MI +G PD+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSIFYSSLIDGLGKAGRIDEAERL 144
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + L+ G L+ G E Q + +M +PD+ T+ L++ +CK+G+
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ S+ + G V+ Y I++ K G + E LL+ +V +G +P ++
Sbjct: 451 CNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNT 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +R D+ F ++K +G PN Y TLI + GR +A +M G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+TP + F+ + GL K EK+E+L
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKW---EKVEEL 597
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + LV GL E +++ +M+ QG PD+ FN+++ +CK G
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + S+ +G DV +Y LI A +DEA +LL +V G P Y
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+A+C F E+ KG P Y T++ R GRF EA + M +
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ ++ DG D A KI Q
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQ 774
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
D +P V ++++ G N G ++ A + ++ G PD+ T+N++I+ +CK+ EV
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQEV 241
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +++ + + G + TY +I + KA +D A + +V+ G P Y I
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + D A F ++ +G P+ Y T+I + +A +M + G+
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + ++ DGL D AE + Q
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQ 389
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + ++ GL A ++ A+ + KM+ +G P T+N++I+ +CK+
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G D TY +I + KA ID+A + +++ G P Y
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + D A F ++ KG PN Y LI G++ E + EM+
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + L+ D L GK + A +
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSL 457
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 4/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++ GL A ++ A+ + +MI +G PD T+N++I+ +CK+
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQA 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY I+I + KA +D A + +++ G P Y
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G GQ+++ E+ P+ Y L+ + G+ EA + M G
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465
Query: 181 LTPISRCFDLVTDGLKNCGK----HDL 203
+ P + ++ G G HDL
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDL 492
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V + ++ GL A ++ A+ + +M+++G P+ T+N++I+ +CK+ EV+
Sbjct: 220 GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMA 279
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G TY +I + KA +D A + +++ G P Y II G
Sbjct: 280 EGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D A F ++ KG P+ YT +I + A +M + G+ P
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399
Query: 185 SRCFDLVTDGLKNCGK-HDLAEKIEQL 210
+ ++ + G + G+ ++ ++I+++
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +++ G G L ++N M+ G P+ FN++I K
Sbjct: 461 MIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAM 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G +V TY LI A+ K G +D+A + ++ +G P ++
Sbjct: 521 IDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +++ F E+ +G P+ + T++ + GR +EA + M MG
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P ++ + DG +C + E ++ L+
Sbjct: 641 LKPDVISYNTLIDG--HCFASRMDEAVKLLD 669
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ G AG +++A + +M+++G P +ET+N+++ + +SG
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y ++ K + TY I++ K DEAF++ +L +
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G+ +DA F+ I G P+ Y + G E M + G
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P S + + L + G+
Sbjct: 851 TAPNSHMLNALIRKLLDRGE 870
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL +G A+++ MIK + T++ +++ CK+
Sbjct: 706 MLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNC 765
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ S+C + D+ T+ I+I + K G ++A L + +G P Y
Sbjct: 766 FDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRL 825
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I + G ++ C FS ++ G PN + LI G A YL ++ E
Sbjct: 826 IAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDE 883
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + ++ GL A ++ A+ + +MI +G PD T+ +I+ +CK+
Sbjct: 321 MIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQS 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G + TY LI G +E + + + P Y
Sbjct: 381 VDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGL 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ ++A F + KG P+ +Y ++ G+ G E + L M G
Sbjct: 441 LLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANG 500
Query: 181 LTPISRCFDLV 191
++P R F+ V
Sbjct: 501 ISPNHRIFNTV 511
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P R + ++ ++ + KM +QG P++ T+ +LI+ +CK G
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555
Query: 61 VEFCV-------------------EMYYSVCKL----------------GSCADVSTYKI 85
V+ V + Y +C + G D+ +
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ + K G + EA RL+ ++V G P Y +I G + D+A + G
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN Y TL+ + GR A EM G+TP ++ + +GL G+ A
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAR 735
Query: 206 KI 207
++
Sbjct: 736 EL 737
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M+ S+ K G +++TY L+ + G + E LL +V +G +P +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ D A FS+++ +G P+ Y T+I + + GR +A Y +M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P + ++ + L K D A+++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M+ G P V ++L++GL + + A +++ M G D PD+ ++ ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+++ Y+ + G +V TY +I A+ KA +D+A +L ++V++G P Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A F ++ G P+ Y +L+ + GR EA MT+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 MGLTP 183
GL P
Sbjct: 333 RGLKP 337
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ +P + L+ L + AK+++ +M+ +G D FNS+I++ CK G
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G D+ TY LI AG +DEA +LL ++V G P Y
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E++ G P+ Y ++ + R A + +TE G
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 615 TQLELSTYNIILHGL 629
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G P+ F+ LI K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D TY +I + K+G +++A R ++++ +P +Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++D A E+ +G + + ++I + GR +E+ M +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + + DG GK D A K+ VS+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Query: 3 DKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
D G PP V ++ G G L+ A ++M+ +G P++ T++S+I +CK+ +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +E+ S+ K G + TY ++ +G EA L + DG P Y +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + G+ +A F + +G P Y TL+ G VE L M G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P F ++ GK D A
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQA 393
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A + +MI + P +NSLI ++C +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G C D + +I + K G + E+ +L +V G P Y+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + + G P+ Y TLI + R +A EM G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 580 VSPDIITYNIILQGL 594
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G AG ++ A +++ M+ G PD T+N+LI CK +E
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D+ TY I++ + + A L + E G S Y I+ G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D+A F + + + +I + GR EA + ++ GL P
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 185 SRCFDLVTDGL 195
R + L+ + L
Sbjct: 689 VRTYSLMAENL 699
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G +E A + +M G PD+ T+N +++ + ++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y + + G+ ++STY I++ + K + DEA R+ NL +
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ + G P+ Y+ + G E + + M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 181 LTPISRCFDLVTDGL 195
T SR + + L
Sbjct: 720 CTANSRMLNSIVRKL 734
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL +AK++ + + G+ +L T+N ++ +CK+
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + T+ I+I A+ K G DEA L L +G P Y+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G N + +++ + G A YL + E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 14/186 (7%)
Query: 11 RGRDLLVQGLLNAGYLESAKQ-------MVNKMIKQGSD---PDLETFNSLIETICKSGE 60
RGR + GL N + A+ N+M + G+D P+L T+ LI + C +G
Sbjct: 48 RGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGR 106
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL-LHNLVEDGHNPFPSLYA 119
++ +V K G D + L+ + +A + L + + G P Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
++KG + +A + G PP+ YTT+I + G +A EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 178 EMGLTP 183
+ G+ P
Sbjct: 227 DRGILP 232
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ ++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTY 94
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIK 142
ILI + AG +D F L N+++ G + P++KG + DA +
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
G PN Y L+ R EA L M + G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDG 192
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M+ S+ K G +++TY L+ + G + E LL +V +G +P +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ D A FS+++ +G P+ Y T+I + + GR +A Y +M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P + ++ + L K D A+++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M+ G P V ++L++GL + + A +++ M G D PD+ ++ ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+++ Y+ + G +V TY +I A+ KA +D+A +L ++V++G P Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A F ++ G P+ Y +L+ + GR EA MT+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 MGLTP 183
GL P
Sbjct: 333 RGLKP 337
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ +P + L+ L + AK+++ +M+ +G D FNS+I++ CK G
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G D+ TY LI AG +DEA +LL ++V G P Y
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E++ G P+ Y ++ + R A + +TE G
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 615 TQLELSTYNIILHGL 629
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G P+ F+ LI K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D TY +I + K+G +++A R ++++ +P +Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++D A E+ +G + + ++I + GR +E+ M +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + + DG GK D A K+ VS+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Query: 3 DKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
D G PP V ++ G G L+ A ++M+ +G P++ T++S+I +CK+ +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +E+ S+ K G + TY ++ +G EA L + DG P Y +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + G+ +A F + +G P Y TL+ G VE L M G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P F ++ GK D A
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQA 393
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A + +MI + P +NSLI ++C +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G C D + +I + K G + E+ +L +V G P Y+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + + G P+ Y TLI + R +A EM G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 580 VSPDIITYNIILQGL 594
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G AG ++ A +++ M+ G PD T+N+LI CK +E
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D+ TY I++ + + A L + E G S Y I+ G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D+A F + + + +I + GR EA + ++ GL P
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 185 SRCFDLVTDGL 195
R + L+ + L
Sbjct: 689 VRTYSLMAENL 699
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G +E A + +M G PD+ T+N +++ + ++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y + + G+ ++STY I++ + K + DEA R+ NL +
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ + G P+ Y+ + G E + + M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 181 LTPISRCFDLVTDGL 195
T SR + + L
Sbjct: 720 CTANSRMLNSIVRKL 734
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL +AK++ + + G+ +L T+N ++ +CK+
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + T+ I+I A+ K G DEA L L +G P Y+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G N + +++ + G A YL + E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 14/186 (7%)
Query: 11 RGRDLLVQGLLNAGYLESAKQ-------MVNKMIKQGSD---PDLETFNSLIETICKSGE 60
RGR + GL N + A+ N+M + G+D P+L T+ LI + C +G
Sbjct: 48 RGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGR 106
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL-LHNLVEDGHNPFPSLYA 119
++ +V K G D + L+ + +A + L + + G P Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
++KG + +A + G PP+ YTT+I + G +A EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 178 EMGLTP 183
+ G+ P
Sbjct: 227 DRGILP 232
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ ++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTY 94
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIK 142
ILI + AG +D F L N+++ G + P++KG + DA +
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
G PN Y L+ R EA L M + G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDG 192
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF L+V+ G++ A + + G P+L F +IE +CK G
Sbjct: 228 MIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGS 287
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DGHNPFPSLYA 119
V+ EM + G +V T+ LI + K G ++AFRL LV + H P Y
Sbjct: 288 VKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 347
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R + + A S +K +G PN YTTLI + G F A + M E
Sbjct: 348 AMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEE 407
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
G +P ++ + DGL C K + E + L+ R+
Sbjct: 408 GFSPNVCTYNAIVDGL--CKKGRVQEAYKVLKSGFRN 442
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G AG E A +++N M ++G P++ T+N++++ +CK G
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ S + G AD TY ILI K I +A L + +V+ G P Y
Sbjct: 429 VQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTT 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R + ++ FF E G P YT++I R G A + M++ G
Sbjct: 489 LIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
S + + GL K D A
Sbjct: 549 CASDSITYGALISGLCKQSKLDEA 572
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++V G G + + + + MI++G D T + ++ C+ G
Sbjct: 193 MCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGF 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + C++G ++ + +I + K G + +AF +L +V G P +
Sbjct: 253 VTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA 312
Query: 121 IIKGAFRRGQFDDAF-CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G ++G + AF F ++ + H PN YT +I+ R + A L M E
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GL P + + + DG G + A ++
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYEL 400
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ G + A+ ++++M +QG P+ T+ +LI+ CK+G E E+
Sbjct: 341 PNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYEL 400
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G +V TY ++ + K G + EA+++L + +G + Y +I +
Sbjct: 401 MNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCK 460
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ + A F+++ G P+ YTTLI + R R E+ + E GL P ++
Sbjct: 461 QAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKT 520
Query: 188 FDLVTDGLKNCGKHDLAEK 206
+ + G G LA K
Sbjct: 521 YTSMICGYCREGNLRLALK 539
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++GF+P V + +V GL G ++ A +++ + G D D T+ LI CK E
Sbjct: 404 MNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAE 463
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + K G D+ +Y LI + + E+ V G P Y
Sbjct: 464 IKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTS 523
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A FF + G + Y LI+ + + EA M E G
Sbjct: 524 MICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKG 583
Query: 181 LTP 183
LTP
Sbjct: 584 LTP 586
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S+K F +V+ G ++ A +MV +M QG P +T N +++ + + G
Sbjct: 123 ISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGL 182
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE+ ++ +C G + +Y++++ K G + E+ R L ++E G + +
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I++ +G A +F G PN +T +I + G +A L EM G
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302
Query: 181 LTPISRCFDLVTDGL 195
P + DGL
Sbjct: 303 WKPNVYTHTALIDGL 317
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + + + + AG +E + + ++ QG PD+ +++ LI + K G
Sbjct: 542 MMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGF 601
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++Y + + G D Y I+I K+G +++A++LL + G P Y
Sbjct: 602 SKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGS 661
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A+ F E K K N VY++LI G+ GR EA L E+ + G
Sbjct: 662 VIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKG 721
Query: 181 LTPISRCFDLVTDGL 195
LTP + ++ + D L
Sbjct: 722 LTPNTYTWNCLLDAL 736
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++ GL L+ A + + + D ++ ++SLI+ K G
Sbjct: 647 MKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGR 706
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G + T+ L+ A+ KA IDEA N+ P Y+
Sbjct: 707 IDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSI 766
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + +F+ AF F+ E++ +G PN YTT+I+ R G +EA + G
Sbjct: 767 MVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSG 826
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P S C++ + +GL N K
Sbjct: 827 GIPDSACYNAMIEGLSNANK 846
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L G +E A +++ M K + P+L ++N LI+ +CK+GE+E
Sbjct: 371 KGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEA 429
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ S+ + G ++ T I+I + KA +DEA + L P + +I
Sbjct: 430 ALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLID 489
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ +DA+ + ++ G PN VYT+LI + GR + EM G +P
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P VR +L+ GL+ G+ + ++ +M +QG D +N +I+ CKSG+V
Sbjct: 580 QGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNK 639
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G V TY +I ++K +DEA+ L + +Y+ +I
Sbjct: 640 AYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLID 699
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ D+A+ E+ KG PN + L+ + EA M + P
Sbjct: 700 GFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPP 759
Query: 184 ISRCFDLVTDGL 195
+ ++ +GL
Sbjct: 760 NEVTYSIMVNGL 771
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 5/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V L+ G +++A ++++M + DL +N I+ K G+
Sbjct: 228 MQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGK 287
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA- 119
V+ + ++ + G D T+ +I + KA +DEA L L D + P +YA
Sbjct: 288 VDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEEL--DSNKSVPCVYAY 345
Query: 120 -PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G G+F++A+ K KG P+ Y ++T GR G+ VE A ++E +
Sbjct: 346 NTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGK-VEEALRILEAMK 404
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
M P ++++ D L G+ + A K++
Sbjct: 405 MDAAPNLTSYNILIDMLCKAGELEAALKVQ 434
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + ++++ L A L+ A + + + PD TF SLI+ + + G+
Sbjct: 437 MKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGK 496
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +Y + G + Y LI K G ++ ++ ++ G +P L
Sbjct: 497 VNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNN 556
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F EIK +G P+ Y+ LI +GG + EM E G
Sbjct: 557 YMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG 616
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L +R +++V DG GK + A ++
Sbjct: 617 LHLDTRAYNIVIDGFCKSGKVNKAYQL 643
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G + A + KM+ G P+ + SLI K G E ++Y + G
Sbjct: 487 LIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG 546
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ + V KAG I++ L + G P Y+ +I G + G D +
Sbjct: 547 CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTY 606
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+K +G + Y +I + G+ +A L EM GL P + V DGL
Sbjct: 607 KLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666
Query: 196 KNCGKHDLA 204
+ D A
Sbjct: 667 AKIDRLDEA 675
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P +V + + L A ++ M K P + +LI + + E
Sbjct: 158 MSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHE 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + ++G V + LI ++ G +D A LL + + N LY
Sbjct: 218 ADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNV 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D A+ FF E+K +G P+ +T++I + + R EA E+
Sbjct: 278 CIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNK 337
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + G + GK + A
Sbjct: 338 SVPCVYAYNTMIMGYGSVGKFNEA 361
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +++++G P+ T+N L++ + K+ E++ + + ++ L
Sbjct: 697 LIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLK 756
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY I++ + K ++AF + + G P Y +I G R G +A
Sbjct: 757 CPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAK 816
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F K G P+ Y +I + ++A E G S+ ++ D L
Sbjct: 817 DLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL 876
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 85/235 (36%), Gaps = 36/235 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M FN + ++ + G ++ A + +++ QG PD TF S+I +CK+
Sbjct: 263 MKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAER 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ VE++ + S V Y +I G +EA+ LL G P Y
Sbjct: 323 VDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNC 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ R+G+ ++A +K+ PN Y LI M + G A M E G
Sbjct: 383 ILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMKEAG 441
Query: 181 L-----------------------------------TPISRCFDLVTDGLKNCGK 200
L TP S F + DGL GK
Sbjct: 442 LFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGK 496
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 2/186 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
LE +Q++ +M G P T ++ + KS ++ + ++ K S Y
Sbjct: 148 LEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTT 207
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI A+S A D LL + E G+ L+ +I R G+ D A E+K
Sbjct: 208 LIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNS 267
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
+ +Y I G+ G+ A + E+ GL P F + L C + E
Sbjct: 268 FNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVL--CKAERVDE 325
Query: 206 KIEQLE 211
+E E
Sbjct: 326 AVELFE 331
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG P + L+ L+ A ++ A M P+ T++ ++ +CK +
Sbjct: 717 LMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRK 776
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G + TY +I +++ G + EA L G P + Y
Sbjct: 777 FNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNA 836
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G + DA+ F E ++KG
Sbjct: 837 MIEGLSNANKAMDAYILFEETRLKG 861
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+DKG P L+ G+ AG +E+A+ +VN+M +G D + FN+LI+ C+SG
Sbjct: 356 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + K G +DV Y + + K DEA LL ++VE G +P +
Sbjct: 416 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G F +A F E++ KG+ PN Y LI + G EA E+ G
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535
Query: 181 LTP-ISRCFDLVTDGLKNCGKHDLAEKI 207
L P + C L+ G GK D+A K+
Sbjct: 536 LIPDVYTCTSLI-HGECIDGKVDMALKL 562
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + + GL + AK ++ M+++G P+ +F +LI+ CK G
Sbjct: 426 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G+ ++ TY +LI SK G + EA +L L G P
Sbjct: 486 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D A F E+ +G PN YT +I+ + GR EA EM E G
Sbjct: 546 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 605
Query: 181 LTP 183
LTP
Sbjct: 606 LTP 608
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V LL+ G N G +E A+++ +M ++G + D+ + S+I C+SG
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG-------------------------- 94
V+ + ++ + G TY LI V KAG
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 405
Query: 95 ---------MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
M+DEA RL + + G Y I G + + D+A + +G
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 465
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN +TTLI + + G FVEA EM E G P ++++ DG G A
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 525
Query: 206 KIE 208
K++
Sbjct: 526 KLK 528
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL G +E +++++++ +G ++ T+N+ IE K ++ E+ + K
Sbjct: 230 IVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE 289
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY +LI S G I+EA RL + E G +Y II R G A
Sbjct: 290 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 349
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ KG P+ Y LI + G+ A + EM G+ F+ + DG
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 409
Query: 195 LKNCGKHDLAEKIE 208
G D A +++
Sbjct: 410 YCESGMVDEALRLQ 423
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 67/122 (54%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + ++L+ G G ++ A ++ +++ +G PD+ T SLI C G+
Sbjct: 496 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 555
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + + G +V TY +I +SK G +EAF+L + E G P ++Y+
Sbjct: 556 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSS 615
Query: 121 II 122
++
Sbjct: 616 LV 617
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+ R + + L G ++S + +M+ + + + +++ +CK G+
Sbjct: 181 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 240
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ V G A+V TY I K + +L + ++G Y
Sbjct: 241 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 300
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ ++A F E++ KG + VYT++I+ R G A EMT+ G
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 360
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + + G+ G+ + A+
Sbjct: 361 LIPSAHTYGALIHGVCKAGQMEAAQ 385
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P L+ G AK++ +M ++G+ P++ T+N LI+ K G
Sbjct: 461 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G DV T LI G +D A +L + + G P Y
Sbjct: 521 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 580
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G + G+ ++AF + E+K G P+ VY++L+
Sbjct: 581 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V + ++G L +++ M K+G ++ T+ LI G++E
Sbjct: 254 KGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEE 313
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G ADV Y +I ++G + A L + + G P Y +I
Sbjct: 314 AQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIH 373
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + GQ + A +E++ KG N ++ TLI G EA + M + GL
Sbjct: 374 GVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLES 433
Query: 184 ISRCFDLVTDGLKNCGKHDLAE 205
++ + GL + D A+
Sbjct: 434 DVFAYNSIASGLCKLNRKDEAK 455
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF L++ GY+ KM++ G P++ F +LI +CK G
Sbjct: 250 MVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGS 309
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DGHNPFPSLYA 119
++ E+ + + G +V T+ LI + K G ++AFRL LV DG+ P Y
Sbjct: 310 IKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + + A S ++ +G PN YTTLI + G FV A + M +
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKE 429
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P ++ + DGL G D A ++
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRL 457
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V ++ G L A+ ++++M +QG P+ T+ +LI+ CK G
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + K G ++ TY +I + K G +DEA+RLL+ + G Y ++
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R+ + + FF+++ G P+ YTTLI+ R + E+ E +GL P
Sbjct: 480 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPT 539
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + + G G LA K+ Q
Sbjct: 540 KKTYTSMICGYCRYGNTSLAVKLFQ 564
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 6/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+P + + ++ GL G L+ A +++NK+ G D T+ L+ C+ +
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQAD 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K+G D+ +Y LI + + E+ RL V G P Y
Sbjct: 486 TNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A F + G P+ Y LI+ + + +A N M + G
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605
Query: 181 LTP--ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L+P ++R +T + C K D + I L+
Sbjct: 606 LSPCEVTR----LTLAYEYCKKDDSSTAINVLD 634
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G G A ++++ M K+G P++ T+N++I+ +CK G
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + V G AD TY IL+ + + + + +++ G P Y
Sbjct: 451 LDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTT 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R+ Q ++ F E G P + YT++I R G A M+ G
Sbjct: 511 LISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG 570
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S + + GL K D A +
Sbjct: 571 CAPDSITYGALISGLCKESKLDDARNL 597
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V G L+ A MV +M QG +T N +++ G VE M+ +C+ G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D ++K+++ A G + EA + L+ +VE G + II ++G +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+F ++ G PN +T LI + G +A L EM G P + DGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G + + ++ + G +E A+ M +M ++G PD +F ++ C G
Sbjct: 180 MQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 239
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + G D +T ++I A + G ++ +VE G P +
Sbjct: 240 VLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTA 299
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+I G ++G AF E+ +G PN +TTLI +C +G
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKG 343
>gi|224576651|gb|ACN56999.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTPISRCFDLVTDG 194
G+TP + CF ++ G
Sbjct: 192 KGITPTAACFRALSTG 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 155
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y G S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF L++ GY+ KM++ G P++ F +LI +CK G
Sbjct: 250 MVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGS 309
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DGHNPFPSLYA 119
++ E+ + + G +V T+ LI + K G ++AFRL LV DG+ P Y
Sbjct: 310 IKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + + A S ++ +G PN YTTLI + G FV A + M +
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKE 429
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P ++ + DGL G D A ++
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRL 457
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V ++ G L A+ ++++M +QG P+ T+ +LI+ CK G
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + K G ++ TY +I + K G +DEA+RLL+ + G Y ++
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R+ + + FF+++ G P+ YTTLI+ R + E+ E +GL P
Sbjct: 480 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPT 539
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + + G G LA K+ Q
Sbjct: 540 KKTYTSMICGYCRYGNTSLAVKLFQ 564
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 6/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+P + + ++ GL G L+ A +++NK+ G D T+ L+ C+ +
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQAD 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K+G D+ +Y LI + + E+ RL V G P Y
Sbjct: 486 TNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A F + G P+ Y LI+ + + +A N M + G
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605
Query: 181 LTP--ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L+P ++R +T + C K D + I L+
Sbjct: 606 LSPCEVTR----LTLAYEYCKKDDSSTAINVLD 634
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G G A ++++ M K+G P++ T+N++I+ +CK G
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + V G AD TY IL+ + + + + +++ G P Y
Sbjct: 451 LDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTT 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R+ Q ++ F E G P + YT++I R G A M+ G
Sbjct: 511 LISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG 570
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S + + GL K D A +
Sbjct: 571 CAPDSITYGALISGLCKESKLDDARNL 597
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V G L+ A MV +M QG P +T N +++ G VE M+ +C+ G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D ++K+++ A G + EA R L+ +VE G + II ++G +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+F ++ G PN +T LI + G +A L EM G P + DGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + ++ + G +E A+ M +M ++G PD +F ++ C G
Sbjct: 180 MQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 239
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G D +T ++I A + G ++ +VE G P +
Sbjct: 240 VLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTA 299
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+I G ++G AF E+ +G PN +TTLI +C +G
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKG 343
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M+ S+ K G +++TY L+ + G + E LL +V +G +P +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ D A FS+++ +G P+ Y T+I + + GR +A Y +M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P + ++ + L K D A+++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M+ G P V ++L++GL + + A +++ M G D PD+ ++ ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+++ Y+ + G +V TY +I A+ KA +D+A +L ++V++G P Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A F ++ G P+ Y +L+ + GR EA MT+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 MGLTP 183
GL P
Sbjct: 333 RGLKP 337
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ +P + L+ L + AK+++ +M+ +G D FNS+I++ CK G
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G D+ TY LI AG +DEA +LL ++V G P Y
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E++ G P+ Y ++ + R A + +TE G
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 615 TQLELSTYNIILHGL 629
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G P+ F+ LI K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D TY +I + K+G +++A R ++++ +P +Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++D A E+ +G + + ++I + GR +E+ M +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + + DG GK D A K+ VS+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Query: 3 DKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
D G PP V ++ G G L+ A ++M+ +G P++ T++S+I +CK+ +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +E+ S+ K G + TY ++ +G EA L + DG P Y +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + G+ +A F + +G P Y TL+ G VE L M G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P F ++ GK D A
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQA 393
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A + +MI + P +NSLI ++C +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G C D + +I + K G + E+ +L +V G P Y+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + + G P+ Y TLI + R +A EM G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 580 VSPDIITYNIILQGL 594
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G AG ++ A +++ M+ G PD T+N+LI CK +E
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D+ TY I++ + + A L + E G S Y I+ G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D+A F + + + +I + GR EA + ++ GL P
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 185 SRCFDLVTDGL 195
R + L+ + L
Sbjct: 689 VRTYSLMAENL 699
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G +E A + +M G PD+ T+N +++ + ++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y + + G+ ++STY I++ + K + DEA R+ NL +
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ + G P+ Y+ + G E + + M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 181 LTPISRCFDLVTDGL 195
T SR + + L
Sbjct: 720 CTANSRMLNSIVRKL 734
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL +AK++ + + G+ +L T+N ++ +CK+
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + T+ I+I A+ K G DEA L L +G P Y+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G N + +++ + G A YL + E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 14/186 (7%)
Query: 11 RGRDLLVQGLLNAGYLESAKQ-------MVNKMIKQGSD---PDLETFNSLIETICKSGE 60
RGR + GL N + A+ N+M + G+D P+L T+ LI + C +G
Sbjct: 48 RGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGR 106
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL-LHNLVEDGHNPFPSLYA 119
++ +V K G D + L+ + +A + L + + G P Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
++KG + +A + G PP+ YTT+I + G +A EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 178 EMGLTP 183
+ G+ P
Sbjct: 227 DRGILP 232
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ ++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTY 94
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIK 142
ILI + AG +D F L N+++ G + P++KG + DA +
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
G PN Y L+ R EA L M + G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDG 192
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D GF P V + ++ G A +E+A ++ +M+ +G PD+ ++ ++I +CK +
Sbjct: 256 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQ 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G +V TY L+ + G +D A L+ + E G+ P Y
Sbjct: 316 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ RR + A + G PP+ Y+T+I+ + G+ EA + L +M G
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P C + D L D A+++ ++ + +
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGM 469
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L+ L A L A+ ++ M+K PD+ T+NS+++ +CKS + +
Sbjct: 473 PDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLL 532
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV TY I+I + K +D AF++L + E P Y+ +I G +
Sbjct: 533 FDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCK 592
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G D AF F E+ G PN Y TLI + + +AA L M + TP S
Sbjct: 593 AGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSIT 652
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + +GL N + + A ++
Sbjct: 653 YTCLINGLCNASRLEEAWRV 672
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +L+ G E A +V M+++G P+L T+NSL++ CK E
Sbjct: 1044 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 1103
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ S+ + G +V +Y +I + KA + E LL ++ + P +
Sbjct: 1104 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 1163
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EM 179
II + + D A+ F+ I+ G PN Y +L+ + RF +A L EMT +
Sbjct: 1164 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 1223
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P ++ V DGL + D A K+
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKL 1251
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M + G PP V +V L+ +G ++ A ++V M+ +G P++ T++SL+ +CK+G
Sbjct: 938 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ + + + G ++ TY +I K G IDEA+ LL +V+ G P Y
Sbjct: 998 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ + G+ +DA + KG+ PN Y +L+ M + A L M +
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 180 GLTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
G P ++ V GL K H+ +EQ+
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 1/196 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI-KQGSDPDLETFNSLIETICKSG 59
+ + G P + + LV GL + + A+ ++ +M KQG PD+ T+N++I+ +CKS
Sbjct: 1184 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ +++ + G D TY I+I ++ K +DEA +L ++++G +P Y
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 1303
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G D A + KG P+ ++ I + GR +A L M
Sbjct: 1304 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 1363
Query: 180 GLTPISRCFDLVTDGL 195
GL P + ++ + G
Sbjct: 1364 GLVPDTVTYNTLLKGF 1379
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ GL AG L+ A ++ +M + G P++ T+N++I+ CK G
Sbjct: 974 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 1033
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G +V TY +L+ A K G ++A L+ +VE G+ P Y
Sbjct: 1034 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + + A S + KG PN Y T+I + + E L +M
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P F+ + D + + D+A ++ L
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNL 1183
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ G AG L A ++ +MI++G PD+ ++LI+ +CK+
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAA 455
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + DV Y ILI A+ KA + EA L +V++ P Y
Sbjct: 456 IDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNS 515
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + +DAF F ++ G P+ Y+ +I + A L M E
Sbjct: 516 VVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAK 575
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + +GL G D A + Q
Sbjct: 576 CVPDVVTYSALINGLCKAGTVDKAFDVFQ 604
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +++ L +++ A ++ M+K G DP T+ +LI+ CK+G
Sbjct: 1255 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 1314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + GS DV T+ I I +SK G + +A LL ++ G P Y
Sbjct: 1315 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 1374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG +DA F ++ G P+ YTTL+ G V+ +Y + E+
Sbjct: 1375 LLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV------GHLVDKKSYKDLLAEVS 1428
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE---QLEVSLR 215
+ + F L H+L+ K+E ++E +R
Sbjct: 1429 KSMVDTGFKL---------NHELSSKLEASIEVEADVR 1457
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 38/239 (15%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S +G+N + L+Q LL + A Q+ K P++ TF LI +C++G++
Sbjct: 836 SQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDI 893
Query: 62 -----------------------------------EFCVEMYYSVCKLGSC-ADVSTYKI 85
+ +E++ + + GSC DV TY
Sbjct: 894 GTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYST 953
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ ++ K+G +D+A RL+ ++V G +P Y+ ++ G + G+ D+A + G
Sbjct: 954 IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 1013
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN Y T+I + GR EA + L EM + G P + ++ D CGK + A
Sbjct: 1014 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 1072
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + +V GL + + A + ++M G PD+ T++ +I + CK ++ +M
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKM 567
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + DV TY LI + KAG +D+AF + ++ G P Y +I G +
Sbjct: 568 LERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCK 627
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ + A ++ + P+ YT LI R EA L EM + G P
Sbjct: 628 INKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMT 687
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + L+ +L E++
Sbjct: 688 YGTLLRALQKTNNLELVEQL 707
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +++ L+SA +M+ +M + PD+ T+++LI +CK+G
Sbjct: 536 MRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGT 595
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G ++ TY LI + K +++A +L + + P Y
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG--RFVEAANYLMEMTE 178
+I G + ++A+ E+K KG P+R Y TL+ + VE ME TE
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATE 715
Query: 179 MG 180
G
Sbjct: 716 EG 717
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ L A ++SA++++ I PD+ ++ LI +CK+
Sbjct: 431 MIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKR 490
Query: 61 VEFCVEMYYSVCKLGSC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ E + V C DV TY ++ + K+ I++AF L + G P Y+
Sbjct: 491 LPE-AESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYS 549
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + D AF +K P+ Y+ LI + G +A + EM
Sbjct: 550 IVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGC 609
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
G P ++ + DGL C + + + E LE+
Sbjct: 610 GCAPNLVTYNTLIDGL--CKINKVEQAAEMLEI 640
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 98/252 (38%), Gaps = 38/252 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL A + ++ +M+ PD+ TFN++I+ +CK+
Sbjct: 1114 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173
Query: 61 VEFCVEMY-------------------YSVCK-----------------LGSCADVSTYK 84
V+ E++ + +CK G D+ TY
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+I + K+ +D A++L ++ DG P Y+ +I + D+A +
Sbjct: 1234 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 1293
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G P Y TLI + G +A L + G P F + D L G+ L
Sbjct: 1294 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR--LR 1351
Query: 205 EKIEQLEVSLRS 216
+ E LE LR+
Sbjct: 1352 QAGELLETMLRA 1363
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ GL ++ A ++++KMI++G P++ T+ +L++ C+ G+
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ VE+ + + G + TY ++ + ++ A ++L +++ G P Y+
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMT-E 178
II G + G+ +A ++ +G P+ +TLI +C +++A L+ M+
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAA--IDSAQELLRMSIG 468
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
M P + ++ L C L E L+V +++
Sbjct: 469 MDCAPDVVAYSILIHAL--CKAKRLPEAESWLDVMVKN 504
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG +++GL +AG A +M K PD T+N++I + KS
Sbjct: 187 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G +V +Y ++ KA ++ A LL +V G P Y
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + Q D+A ++ +G PN Y TL+ R G A + +MTE G
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + ++ + C ++D+ + L++ +++
Sbjct: 366 YRPNAITYNNIMHVF--CRRNDMERAHQVLQMMIQT 399
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 51/254 (20%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + + L G L A +++ M++ G PD T+N+L++ C + E
Sbjct: 1328 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTED 1387
Query: 64 CVEMYYSV----CK---------LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV--- 107
V+++ + C+ +G D +YK L+ VSK+ M+D F+L H L
Sbjct: 1388 AVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKS-MVDTGFKLNHELSSKL 1446
Query: 108 --------------------------EDGHNPFPS-------LYAPIIKGAFRRGQFDDA 134
+D F L++ ++ Q + A
Sbjct: 1447 EASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQA 1506
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EMGLTPISRCFDLVTD 193
F + + ++G P+ + +L+TMC G A + + ++ + GL P F V D
Sbjct: 1507 FGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVID 1566
Query: 194 GLKNCGKHDLAEKI 207
L G + AE +
Sbjct: 1567 LLGRLGLVNEAEDL 1580
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 13/194 (6%)
Query: 6 FNPPVRGRDLLVQGLLNAG----YLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+P + G+ ++Q L++ G + E A+ + G ++ N L+ + K+ +
Sbjct: 91 LSPEIVGK--VLQRLIDPGAALVFFEWAE------TRDGYQHEIFCCNCLLNVLVKAHQY 142
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+++ S + D TY LI +AG I A+ L + G ++ I
Sbjct: 143 SQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSI 202
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
++G GQ DA F E+ K PP+ Y T+I + R +A L EM + G
Sbjct: 203 LRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF 261
Query: 182 TPISRCFDLVTDGL 195
P ++ V G
Sbjct: 262 APNVFSYNTVLHGF 275
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V+ +L+ + NAG L+ A+ ++N M +G PD T+N+ + +CK+G
Sbjct: 235 MLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGR 294
Query: 61 VEFCVEMYYSVCKLGS-CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLY 118
V+ +E ++ + G+ + Y LI + AG +E F+ ++E +P LY
Sbjct: 295 VDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLY 354
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I+G G+ DDAF FF E+K K P+ Y TL+ G A + + EM +
Sbjct: 355 TIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQ 414
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ + ++ GL C K + E ++
Sbjct: 415 NNVVLDTNTHTIMIHGL--CKKQLVDEAMQ 442
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ GL G A ++ ++M+++G P+++T L+ ++C +G+
Sbjct: 200 MVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQ 259
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP-SLYA 119
++ + S+ G D TY + + KAG +DEA L L G Y+
Sbjct: 260 LKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYS 319
Query: 120 PIIKGAFRRGQFDDAF-CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G F G++++ F C+ ++ P+ +YT +I C GR +A + EM E
Sbjct: 320 CLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKE 379
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
TP + C++ + L + G D A +
Sbjct: 380 KRFTPDTFCYNTLLKALCDSGDLDGARSL 408
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL--------------E 46
M + G +P V ++L+ GL A LE A+ + KM + G++P L E
Sbjct: 447 MVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVKDSE 505
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ L++++C+SG+V ++ + G DV TY L+ + K +D A RL L
Sbjct: 506 SLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFREL 565
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G + Y +I R +++DA F +I G P+ +Y +++ R +
Sbjct: 566 QVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKL 625
Query: 167 VEAANYLME 175
+A N+ +
Sbjct: 626 SQAINFWFD 634
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F+P + ++++G AG ++ A ++M ++ PD +N+L++ +C SG+++
Sbjct: 347 FSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGAR 406
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + D +T+ I+I + K ++DEA ++ +VE G +P Y +I G
Sbjct: 407 SLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGL 466
Query: 126 FRRGQFDDAFCFFSEIKIKGHPP--------------NRPVYTTLITMCGRGGRFVEAAN 171
+R + ++A F ++++ +P + + + +MC + G+ ++A
Sbjct: 467 YRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMC-QSGQVLKAYK 525
Query: 172 YLMEMTEMGLTPISRCFDLVTDGL 195
L + + G+ P ++ + +GL
Sbjct: 526 LLRGIMDSGVVPDVVTYNTLLNGL 549
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV--- 71
+++ GL ++ A Q+ + M++ G P + T+N LI+ + ++ +E ++Y +
Sbjct: 426 IMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVG 485
Query: 72 --------CKLGS--CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
LG+ D + + L+ ++ ++G + +A++LL +++ G P Y +
Sbjct: 486 NNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTL 545
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G + D A F E+++KG + Y TLI R R+ +A ++ +G
Sbjct: 546 LNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGG 605
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
TP ++ + L C + L++ I
Sbjct: 606 TPSLSIYNSIMRSL--CRMNKLSQAI 629
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSG-EVE 62
G PP + L+ +AG A ++M + G P +N+++ + SG V
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVP 191
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ +Y + G + +TY +L+ + K G +A +L +++ G P + ++
Sbjct: 192 LALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILL 251
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
GQ +A + ++ KG PP+ Y ++ + GR EA L + G
Sbjct: 252 SSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTF 311
Query: 183 PIS-RCFDLVTDGLKNCGKHD-----LAEKIEQLEVS 213
+ + + + DGL G+++ E +EQ + S
Sbjct: 312 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFS 348
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 10/182 (5%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSV-----CKLGSCADVSTYKILIPAVSKAG 94
G P F +LI +G V+ + + C+ + + ++L V+ G
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVL---VASGG 188
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
++ A L + +V G P + Y ++ G +RG DA F E+ +G PN +T
Sbjct: 189 VVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHT 248
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
L++ G+ EA N L M + G P ++ GL G+ D E IE+LE
Sbjct: 249 ILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVD--EAIERLEALR 306
Query: 215 RS 216
R+
Sbjct: 307 RT 308
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 65/131 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV + +G + A +++ ++ G PD+ T+N+L+ +CK ++ + ++ + G
Sbjct: 510 LVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG 569
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI ++ +A ++A L +++ G P S+Y I++ R + A
Sbjct: 570 FSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAI 629
Query: 136 CFFSEIKIKGH 146
F+ + +K +
Sbjct: 630 NFWFDHLLKKY 640
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 5/145 (3%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF+ L+ LL A A + ++ G P L +NS++ ++C+ ++
Sbjct: 568 KGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQ 627
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKA---GMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ L ++S +I + K G +DEA R L + ++ + Y
Sbjct: 628 AINFWFD--HLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTI 685
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+ G + + DDA F ++ G
Sbjct: 686 WLIGLIQARRIDDALKIFHILEESG 710
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+DKG P L+ G+ AG +E+A+ +VN+M +G D + FN+LI+ C+SG
Sbjct: 360 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + K G +DV Y + + K DEA LL ++VE G +P +
Sbjct: 420 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G F +A F E++ KG+ PN Y LI + G EA E+ G
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539
Query: 181 LTP-ISRCFDLVTDGLKNCGKHDLAEKI 207
L P + C L+ G GK D+A K+
Sbjct: 540 LIPDVYTCTSLI-HGECIDGKVDMALKL 566
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + + GL + AK ++ M+++G P+ +F +LI+ CK G
Sbjct: 430 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 489
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G+ ++ TY +LI SK G + EA +L L G P
Sbjct: 490 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 549
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D A F E+ +G PN YT +I+ + GR EA EM E G
Sbjct: 550 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 609
Query: 181 LTP 183
LTP
Sbjct: 610 LTP 612
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V LL+ G N G +E A+++ +M ++G + D+ + S+I C+SG
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG-------------------------- 94
V+ + ++ + G TY LI V KAG
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 409
Query: 95 ---------MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
M+DEA RL + + G Y I G + + D+A + +G
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN +TTLI + + G FVEA EM E G P ++++ DG G A
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529
Query: 206 KIE 208
K++
Sbjct: 530 KLK 532
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL G +E +++++++ +G ++ T+N+ IE K ++ E+ + K
Sbjct: 234 IVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE 293
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY +LI S G I+EA RL + E G +Y II R G A
Sbjct: 294 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 353
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ KG P+ Y LI + G+ A + EM G+ F+ + DG
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 413
Query: 195 LKNCGKHDLAEKIE 208
G D A +++
Sbjct: 414 YCESGMVDEALRLQ 427
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+ R + + L G ++S + +M+ + + + +++ +CK G+
Sbjct: 185 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 244
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ V G A+V TY I K + +L + ++G Y
Sbjct: 245 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 304
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ ++A F E++ KG + VYT++I+ R G A EMT+ G
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + + G+ G+ + A+
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQ 389
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V + ++G L +++ M K+G ++ T+ LI G++E
Sbjct: 258 KGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEE 317
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G ADV Y +I ++G + A L + + G P Y +I
Sbjct: 318 AQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIH 377
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + GQ + A +E++ KG N ++ TLI G EA + M + GL
Sbjct: 378 GVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLES 437
Query: 184 ISRCFDLVTDGLKNCGKHDLAE 205
++ + GL + D A+
Sbjct: 438 DVFAYNSIASGLCKLNRKDEAK 459
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP + ++++ GL G ++ +++ +M K+ PD TFN+LI C G
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G +V TY LI ++ KAG ++ A L + + G +P Y
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A+ E+ G P Y LI GR +A+ L EM E G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P + + G C +L EK QL+V +
Sbjct: 444 FIPDVVSYSTIISGF--CRNQEL-EKAFQLKVEM 474
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P R L+ G G+L+ A Q++ +M++ G P + T+N+LI C G
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G DV +Y +I + +++AF+L +V G +P + Y+
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G ++ + + F E+ G PP+ YT+LI G +A EM + G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P ++++ +G + A+++
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRL 575
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS + + P + L+ G N G A + +M+K G P++ T+ +LI ++CK+G
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + G + TY LI S+ G + +A++++ +VE+G P Y
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +DA E+ +G P+ Y+T+I+ R +A +EM G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
++P + + GL C + L E
Sbjct: 479 ISPDVATYSSLIQGL--CKQRRLGE 501
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V ++L++G AG LE +M + G P++ T+N++I+ CK +
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G ++ +Y ++I + + G + E +L + + + P +
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G F A +E+ G PN YTTLI + G A +L +M + G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P R + + DG G
Sbjct: 374 LHPNGRTYTTLIDGFSQQG 392
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P + + L+ G G +E A ++ +MI++G PD+ +++++I C++ E
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G DV+TY LI + K + E L ++ G P Y
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D A E+ KG P+ Y LI + R EA L+++
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583
Query: 181 LTPISRCFDLVTDGLKN 197
P ++ + D N
Sbjct: 584 SVPNEITYNTLIDNCNN 600
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 17/231 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+QGL L + +M+ G PD T+ SLI C G+
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G D+ TY +LI +K EA RLL L+ + P Y
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593
Query: 121 II---------------KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+I KG +G ++A + KG+ N VY +I + G
Sbjct: 594 LIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+A N EM G P S + L + GK E + L+ +L+S
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE--VELNQLLDYTLKS 702
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE-VEFCVEMYYSVC 72
DL+V+ + A +VN G P + ++N++++ + ++ + V+ ++ +
Sbjct: 136 DLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMV 195
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G +V TY ILI AG ++ + +G P Y II + +
Sbjct: 196 ESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIG 255
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+AF + +KG PN Y +I R G+ E + L EM++ P F+ +
Sbjct: 256 EAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLI 315
Query: 193 DGLKNCG 199
+G N G
Sbjct: 316 NGYCNVG 322
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V ++L++ LLN G E ++++ KM + DP++ T++ LI T+C+ G++E
Sbjct: 292 KGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G D +Y LI A + G +D A L ++ DG P Y ++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ D A F ++ G PN Y T+ + G + A + ++EM G+ P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K F+P ++++ L + G L+ A +++N+++ P + T+ LIE G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G D+ TY +I + K GM+D AF ++ NL G P Y
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNI 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ +G++++ +++ + PN Y+ LIT R G+ EA N L M E G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
LTP + +D + G+ D+A IE LE
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVA--IEFLET 393
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ + G ++ A +++++M+ +G PD+ T+N++I +CK G V+ EM
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ GS DV +Y IL+ A+ G +E +L+ + + +P Y+ +I R
Sbjct: 286 VRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ ++A +K KG P+ Y LI R GR A +L M G P
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ V L GK D A +I
Sbjct: 406 YNTVLATLCKNGKADQALEI 425
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P D L+ G L+ A + + MI G PD+ +N+++ T+CK+G+
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + ++G + S+Y + A+ +G A ++ ++ +G +P Y
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G D+AF +++ P+ Y ++ + R +A N L M G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + ++ +G+ G AE +E
Sbjct: 539 CRPNETTYTVLIEGIGFAGYR--AEAME 564
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V +L+ L G +E A ++ M ++G PD +++ LI C+ G ++ +E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ G D+ Y ++ + K G D+A + L E G +P S Y + +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G A E+ G P+ Y ++I+ R G EA L++M P
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLE 211
+++V G C H + + I LE
Sbjct: 510 TYNIVLLGF--CKAHRIEDAINVLE 532
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+NP V L++G + A +++ + K G PD+ +N+LI CK
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNR 173
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + D TY I+I ++ G +D A ++L+ L+ D P Y
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I+ G D+A E+ +G P+ Y T+I MC G V+ A ++ E+
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG--MVDRAFEMVRNLEL 291
Query: 180 -GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++++ L N GK + EK+
Sbjct: 292 KGSEPDVISYNILLRALLNQGKWEEGEKL 320
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
++G E+ LL +V G+NP L +IKG F A EI K P+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y LI + R +A L M +P + ++++ L + GK DLA K+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + VYT LI+ R G+ V+A L EM +G
Sbjct: 323 LIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 383 LKPDARTYTMIINEF--CKKGDVWK 405
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 233 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 228 IDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + GL G+ AEK+ E L V L+
Sbjct: 348 TRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLK 384
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ +Y +I
Sbjct: 301 AHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R GQ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K ID+A L ++ G P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + DG G D A
Sbjct: 317 KITYTTLIDGCCKDGDLDTA 336
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ + D + +LI +C+ G+
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQ 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP + ++++ GL G ++ +++ +M K+ PD TFN+LI C G
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G +V TY LI ++ KAG ++ A L + + G +P Y
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A+ E+ G P Y LI GR +A+ L EM E G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P + + G C +L EK QL+V +
Sbjct: 444 FIPDVVSYSTIISGF--CRNQEL-EKAFQLKVEM 474
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P R L+ G G+L+ A Q++ +M++ G P + T+N+LI C G
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G DV +Y +I + +++AF+L +V G +P + Y+
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G ++ + + F E+ G PP+ YT+LI G +A EM + G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P ++++ +G + A+++
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRL 575
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS + + P + L+ G N G A + +M+K G P++ T+ +LI ++CK+G
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + G + TY LI S+ G + +A++++ +VE+G P Y
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +DA E+ +G P+ Y+T+I+ R +A +EM G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
++P + + GL C + L E
Sbjct: 479 ISPDVATYSSLIQGL--CKQRRLGE 501
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V ++L++G AG LE +M + G P++ T+N++I+ CK +
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G ++ +Y ++I + + G + E +L + + + P +
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G F A +E+ G PN YTTLI + G A +L +M + G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P R + + DG G
Sbjct: 374 LHPNGRTYTTLIDGFSQQG 392
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P + + L+ G G +E A ++ +MI++G PD+ +++++I C++ E
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G DV+TY LI + K + E L ++ G P Y
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D A E+ KG P+ Y LI + R EA L+++
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583
Query: 181 LTPISRCFDLVTDGLKN 197
P ++ + D N
Sbjct: 584 SVPNEITYNTLIDNCNN 600
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 17/231 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+QGL L + +M+ G PD T+ SLI C G+
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G D+ TY +LI +K EA RLL L+ + P Y
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593
Query: 121 II---------------KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+I KG +G ++A + KG+ N VY +I + G
Sbjct: 594 LIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+A N EM G P S + L + GK E + L+ +L+S
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE--VELNQLLDYTLKS 702
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 1/192 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE-VEFCVEMYYSVC 72
DL+V+ + A +VN G P + ++N++++ + ++ + V+ ++ +
Sbjct: 136 DLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMV 195
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G +V TY ILI AG ++ + +G P Y II + +
Sbjct: 196 ESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIG 255
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+AF + +KG PN Y +I R G+ E + L EM++ P F+ +
Sbjct: 256 EAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLI 315
Query: 193 DGLKNCGKHDLA 204
+G N G A
Sbjct: 316 NGYCNVGNFHQA 327
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG+ + + L+ L+ G++E A ++ ++ + G ++ T N ++ +CK G+
Sbjct: 181 LRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGK 240
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + G D+ TY LI A S G+++EAF L+H + G +P Y
Sbjct: 241 MEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNT 300
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+++ A F+E+ G P+ Y +L+ + G VE N +M
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P CF + G D A
Sbjct: 361 VVPDLVCFSSMMSLFTRSGNLDKA 384
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+P V + ++ GL G E AK++ +M++ G PD T+ SL+ CK G+
Sbjct: 286 MPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + D+ + ++ +++G +D+A +++ E G P +Y
Sbjct: 346 AVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R+G +A +E+ +G + Y T++ + EA EMTE G
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P S ++ DG +C +L +E
Sbjct: 466 LFPDSYTLTILIDG--HCKLGNLQNAME 491
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLL++ + A L A + + +G ++ N+LI ++ + G VE +Y + +
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISR 218
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +V T I++ A+ K G +++ L + E G P Y +I +G ++
Sbjct: 219 SGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEE 278
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF + KG P Y T+I + G++ A EM GL+P S + +
Sbjct: 279 AFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL- 337
Query: 194 GLKNCGKHDLAEKIEQLEVSLRS 216
++ C K D E E + +RS
Sbjct: 338 -MEACKKGDAVET-ENIFSDMRS 358
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G V +++V L G +E ++++ ++G PD+ T+N+LI G
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ +++ G V TY +I + K G + A + ++ G +P + Y
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ A ++G + FS+++ + P+ +++++++ R G +A Y + E G
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + ++ G C K ++E +
Sbjct: 396 LIPDNVIYTILIQGY--CRKGMISEAM 420
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P +L+ G G L++A ++ KM ++ D+ T+N+L++ K G+
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + ++ IL+ A+ G + EAFR+ ++ P +
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
+IKG R G D F ++ +G P+ Y TLI + +A + +M E
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640
Query: 180 -GLTPISRCFDLVTDGLKNCGKHDLAE 205
GL P ++ + G C ++ + E
Sbjct: 641 GGLVPDVFTYNSILHGF--CRENQMKE 665
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V + ++ GL L A ++ N+M ++G PD T LI+ CK G
Sbjct: 426 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGN 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + + DV TY L+ K G ID A + ++V P P ++
Sbjct: 486 LQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSI 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ +G +AF + E+ K P + ++I R G + +L +M G
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605
Query: 181 LTP 183
P
Sbjct: 606 FVP 608
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G L+ A N + + G PD + LI+ C+ G + + + + + G DV T
Sbjct: 378 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVT 437
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y ++ + K M+ EA +L + + E G P +I G + G +A F ++K
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK 497
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
K + Y TL+ G+ G A +M + P F ++ + L C K
Sbjct: 498 EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL--CSKGH 555
Query: 203 LAE 205
L+E
Sbjct: 556 LSE 558
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P +LV L + G+L A ++ ++MI + P + NS+I+ C+SG
Sbjct: 531 MVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGN 590
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ G D +Y LI K + +AF L+ + E P + Y
Sbjct: 591 ASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTY 650
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G R Q +A ++ +G P+R YT+LI EA + EM +
Sbjct: 651 NSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ 710
Query: 179 MGLTP 183
G +P
Sbjct: 711 RGFSP 715
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 17/209 (8%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE----VEFCVEMYYSV 71
++ L+ +G L A+ V +MI++ +E NSL+ T G + + +
Sbjct: 109 MIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQA 168
Query: 72 CKL-------------GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
KL G + LI ++ + G ++ A+R+ + G
Sbjct: 169 RKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTL 228
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ + F SE++ KG P+ Y TLI+ G EA + M
Sbjct: 229 NIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPS 288
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P ++ V +GL GK++ A+++
Sbjct: 289 KGFSPGVYTYNTVINGLCKHGKYERAKEV 317
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V L+ G+ N G ++ A ++ N+M++ G +PD+ ++N+LI +C SG
Sbjct: 158 GIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMA 217
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V ++ + + G +V TY +I ++ K ++++A L +V G P Y I+ G
Sbjct: 218 VHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHG 277
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ ++A F ++ G P+ Y +I + +AA++L EM + G+ P
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPD 337
Query: 185 SRCFDLVTDGLKNCGKHD----LAEKIEQ 209
+ + GL G+ + L +K+EQ
Sbjct: 338 VVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ L + A +++M+ +G PD T+NS++ +C G+
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G DV TY I+I ++ K ++++A L +V+ G P Y
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G GQ ++A F +++ KG P+ Y T+I + +A +L EM + G
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + + G N G+ D A ++
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQL 430
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + +V GL G L A ++ +M + G PD+ T+N +I+++ K
Sbjct: 259 MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRL 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G DV TY ++ + G ++EA RL + + G P Y
Sbjct: 319 VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNT 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + +DA F SE+ +G PPN Y+T++ G+ EA EM
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438
Query: 181 LTPISRCFDLVTDGL 195
+ P + F ++ DGL
Sbjct: 439 VMPNTLTFSILVDGL 453
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G V ++L+ L +++ A + KM K G PD+ TF +LI +C G+++
Sbjct: 123 GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVA 182
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+Y + + G DV +Y LI + +G + A + + ++G P Y II
Sbjct: 183 VELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +DA F SE+ +G PP+ Y +++ G+ EA M + G P
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302
Query: 185 SRCFDLVTDGL 195
++++ D L
Sbjct: 303 VVTYNIIIDSL 313
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++++ L + A +++M+ QG PD+ T+ +++ +C G+
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + G DV Y +I ++ K ++++A L +V+ G P Y+
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G GQ D+A F E+ + PN ++ L+ + G EA MTE G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P ++ + +G K + A K+ ++ V
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMV 505
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ G N+ ++ AK ++ +M + P+ T+N++++ +C G
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ +C G + TY IL+ + K G +DEA +L ++ E P LY
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTI 623
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLI 157
+I+G F G+ + A FS++ G PP R Y +I
Sbjct: 624 LIEGMFIGGKLEVAKGLFSKLSADGIQPPGR-TYNVMI 660
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P ++ G N G L+ A Q+ +M+ + P+ TF+ L++ +C+ G
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ + G ++ TY L+ ++EA ++ +V G P Y
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D A +++ +K PN Y T++ GR ++A +M G
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ +GL G D A K+
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKL 605
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ N+M G + + N LI +C+ V+F V ++ + KLG DV T+ LI V
Sbjct: 115 LCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVC 174
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G I A L + +V GH P Y +I G G + A F +++ G PN
Sbjct: 175 NEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVV 234
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y T+I + +A ++L EM G+ P + ++ + GL G+ + A ++
Sbjct: 235 TYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRL 290
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P + + L+ G + A+++ M+ +G PDL ++N LI C S
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + TY ++ + G + +A L + G P Y+
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G D+A F +K K P+ +YT LI GG+ A +++ G
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P R ++++ GL G D A ++
Sbjct: 649 IQPPGRTYNVMIKGLLKEGLSDEAYEL 675
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M D+G P V ++ GL G L A ++ KM ++G PD+ +N++I+++CK
Sbjct: 329 MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388
Query: 58 -SGEVEFCVEM---------------YYSVCKLGSCADVS----------------TYKI 85
+ +EF EM + C LG + + T+ I
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + + GM+ EA + + E G P Y ++ G R + ++A F + KG
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
P+ Y LI R +A L +M+ LTP + ++ + GL G+
Sbjct: 509 CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS K P + +++GL G L A+++ KM G P L T++ L+ +CK G
Sbjct: 539 MSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGH 598
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ S+ + D+ Y ILI + G ++ A L L DG P Y
Sbjct: 599 LDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNV 658
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH 146
+IKG + G D+A+ F + K+ H
Sbjct: 659 MIKGLLKEGLSDEAYELFRKWKMMKH 684
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P +LV GL G + A+ + M ++G +P++ T+N+L+ C +
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ +Y ILI + +D+A LL + P Y
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+KG G+ DA F ++ G P Y+ L+ + G EA M E
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + ++ +G+ GK ++A+
Sbjct: 614 LEPDIILYTILIEGMFIGGKLEVAK 638
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ GL G+L+ A ++ M ++ +PD+ + LIE + G+
Sbjct: 574 MCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGK 633
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
+E ++ + G TY ++I + K G+ DEA+ L HN
Sbjct: 634 LEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHN 685
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 62/161 (38%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M + P + F + +I K + V + + G V + ILI + +
Sbjct: 83 RMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLN 142
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D A + + + G P + +I G G+ A ++E+ GH P+ Y
Sbjct: 143 HVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYN 202
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
TLI G A + +M + G P ++ + D L
Sbjct: 203 TLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSL 243
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V ++L++ LLN G E ++++ KM + DP++ T++ LI T+C+ G++E
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G D +Y LI A + G +D A L ++ DG P Y ++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ D A F ++ G PN Y T+ + G + A + ++EM G+ P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K F+P ++++ L + G L+ A +++N+++ P + T+ LIE G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G D+ TY +I + K GM+D AF ++ NL G P Y
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ +G++++ +++ + PN Y+ LIT R G+ EA N L M E G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
LTP + +D + G+ D+A IE LE
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVA--IEFLET 393
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ + G ++ A +++++M+ +G PD+ T+N++I +CK G V+ EM
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ G DV +Y IL+ A+ G +E +L+ + + +P Y+ +I R
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ ++A +K KG P+ Y LI R GR A +L M G P
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ V L GK D A +I
Sbjct: 406 YNTVLATLCKNGKADQALEI 425
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P D L+ G L+ A + + MI G PD+ +N+++ T+CK+G+
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + ++G + S+Y + A+ +G A ++ ++ +G +P Y
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G D+AF +++ P+ Y ++ + R +A N L M G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + ++ +G+ G AE +E
Sbjct: 539 CRPNETTYTVLIEGIGFAGYR--AEAME 564
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V +L+ L G +E A ++ M ++G PD +++ LI C+ G ++ +E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ G D+ Y ++ + K G D+A + L E G +P S Y + +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G A E+ G P+ Y ++I+ R G EA L++M P
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLE 211
+++V G C H + + I LE
Sbjct: 510 TYNIVLLGF--CKAHRIEDAINVLE 532
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+NP V L++G + A +++ + K G PD+ +N+LI CK
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNR 173
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + D TY I+I ++ G +D A ++L+ L+ D P Y
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I+ G D+A E+ +G P+ Y T+I MC G V+ A ++ E+
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG--MVDRAFEMVRNLEL 291
Query: 180 -GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++++ L N GK + EK+
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKL 320
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
++G E+ LL +V G+NP L +IKG F A EI K P+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y LI + R +A L M +P + ++++ L + GK DLA K+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L++GL +A E ++++ +M + D TFN L++ C++G
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG ++ DA S++ +G P N + TLI + G +A L +M G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK D E +E L V
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTD--EALELLNV 532
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P ++++GL +A A+ ++++MI+QG + TFN+LI +CK G
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG DEA LL+ +V G +P +Y+
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R G+ + F I+ + +Y +I+ + G A +L M G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607
Query: 181 LTPISRCFDLVTDGLKNCG 199
P + ++ GL + G
Sbjct: 608 CVPNESTYTILIRGLASEG 626
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L G + A ++++M ++G P ++ ++E C+ G V + + G
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 187
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV +++ A+ G +DEA LL +L G P Y ++KG ++
Sbjct: 188 CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 247
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ PPN + TLI+ R G F L +M E G TP R + + DG+
Sbjct: 248 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGI 307
Query: 196 KNCGKHDLAEKI 207
G ++A +I
Sbjct: 308 CKEGHLEVAHEI 319
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M+++G PD+ T+ ++I CK G ++ V + S+
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + A +A L+ +++ G P + +I ++G +
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G++P + + +
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 550
Query: 194 GLKNCGK 200
L G+
Sbjct: 551 ALSREGR 557
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L++ + + G ++ A ++ + G +PD+ ++N++++ +C + E+ + +
Sbjct: 196 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ ++ T+ LI + + G+ + +L +VE G P +YA II G + G +
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 315
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + + G PN Y TL+ R+ E L EM + F+++ D
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375
Query: 194 GLKNCGKHD-LAEKIEQL 210
G D + E +EQ+
Sbjct: 376 FFCQNGLVDRVIELLEQM 393
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + +++GL A ++++ +M++ P++ TFN+LI +C++G E
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 281
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + G D+ Y +I + K G ++ A +L+ + G P Y ++KG
Sbjct: 282 HEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 341
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++++ +E+ K P + + L+ + G L +M E G P
Sbjct: 342 LCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPD 401
Query: 185 SRCFDLVTDG 194
+ V +G
Sbjct: 402 VITYTTVING 411
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V ++ G G ++ A ++ M G P+ ++ +++ +C +
Sbjct: 393 MLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + T+ LI + K G++++A LL ++ +G +P Y+
Sbjct: 453 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+I G + G+ D+A + + KG PN +Y+++ + R GR
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P + L G + QM + + D +N++I ++CK GE
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
E +E + G + STY ILI ++ G + EA +L L G
Sbjct: 593 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---LYAPIIKGAFRRGQFDDAFCFFS 139
Y ++ +AG ++ A RL + P P Y P+++ RG+ DA
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV------PVPPNAYTYFPVVRALCARGRIADALAVLD 146
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
E+ +G P P+Y ++ RGG F A L ++ G
Sbjct: 147 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 187
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+QGL AG + A+++ KM+ G PD+ T++ L++ +CK G+
Sbjct: 422 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + K ++ TY I+I + KAG +++ + L +L G P +Y
Sbjct: 482 LEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G ++A F E+K G P+ Y TLI R G +A + EM G
Sbjct: 542 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 601
Query: 181 L----TPISRCFDLVTDG 194
+ IS +++ DG
Sbjct: 602 FVGDASTISMVINMLHDG 619
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V + L++G A +E ++ +M ++G + T+N+LI+ + ++G+
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY IL+ + K G +++A + L + P Y
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNI 506
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ +D + F + +KG PN +YTT+I+ R G EA EM E G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 566
Query: 181 LTPISRCFD-LVTDGLKNCGKHDLAEKIEQLE 211
P S C++ L+ L++ K AE I+++
Sbjct: 567 TLPDSGCYNTLIRARLRDGDKAASAELIKEMR 598
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + L+ G + + A +V++M++ G PD TFN+LI + +
Sbjct: 142 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D+ TY ++ + K G ID A LL + + +Y
Sbjct: 202 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNT 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDAF F++++ KG P+ Y +LI+ GR+ +A+ L +M E
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F+ + D GK AEK+
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKL 348
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P + L+ GL A ++++M+ +G PDL T+ +++ +CK G+
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + K A+V Y +I + K +D+AF L + + G P Y
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G++ DA S++ + PN + +LI + G+ +EA EM +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ P ++ + +G + D A++I L VS
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 389
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL +++ A + NKM +G PD+ T+NSLI +C G + + +
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T+ LI A +K G + EA +L +++ +P Y +I G + D+A
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 381
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ + K P+ Y TLI + R E EM++ GL + ++ + GL
Sbjct: 382 QIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 441
Query: 196 KNCGKHDLAEKIEQLEVS 213
G D+A+KI + VS
Sbjct: 442 FQAGDCDMAQKIFKKMVS 459
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V + L+ G L A+++ ++MI++ DP++ T+NSLI C
Sbjct: 317 MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + DV TY LI KA ++E L + + G Y
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F+ G D A F ++ G PP+ Y+ L+ + G+ +A + +
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 496
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++ +G+ GK
Sbjct: 497 MEPNIYTYNIMIEGMCKAGK 516
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ L N G A ++++ MI++ +P++ TFNSLI+ K G+
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + ++ TY LI +DEA ++ +V P Y
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + ++ F E+ +G N Y TLI + G A +M G
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ DGL GK + A
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKA 485
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T++ L+ C+ ++ + + + KLG D+ T L+ I EA L+ +
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGR 165
VE G+ P + +I G F + +A + +G P+ Y T++ +C RG
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD- 236
Query: 166 FVEAANYLMEMTEMGLTPISRC-FDLVTDGL 195
++ A L++ E G + ++ + DGL
Sbjct: 237 -IDLALSLLKKMEKGKIEANVVIYNTIIDGL 266
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L + L+ L+ A + +M+K P + F+ L+ I K + + + + +
Sbjct: 49 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 108
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
LG + TY IL+ + + A +L +++ G+ P + ++ G +
Sbjct: 109 NLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 168
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A ++ G+ P+ + TLI + EA + M G P + V
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 228
Query: 193 DGLKNCGKHDLA 204
+GL G DLA
Sbjct: 229 NGLCKRGDIDLA 240
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + +V GL A L+SA +V +M G PD T+ +LI+ CK E
Sbjct: 247 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ ++ G D TY LI +SKAG +A R+L ++E G P + Y
Sbjct: 307 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 366
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R+G E++ KG P Y ++ + G+ A L M +G
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++P ++++ DG +C KH IE+L+
Sbjct: 427 VSPDDITYNILLDG--HC-KHGKVTDIEELK 454
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P V L+QGL G +E A+ + KM +G P+ F LI+ CK G+
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E++ + + G D TY ++ + +A + A ++ + G P Y
Sbjct: 237 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 296
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A + +G + YT LI+ + GR +A L EM E G
Sbjct: 297 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 356
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + + +V D C K D+ + L+
Sbjct: 357 LEPDNTTYTMVIDAF--CRKGDVKTGLRLLK 385
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 100/207 (48%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P + ++L++ L+ G L SA+ + ++M +G + +FN++I +C++G+++
Sbjct: 109 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 168
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + + G DV TY LI + + G I++A + + G P ++ +I
Sbjct: 169 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 228
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
++G + E++ +G P+ Y ++ R A+ ++EM GL
Sbjct: 229 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 288
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + + DG + D+A +I+Q
Sbjct: 289 PDTVTYTTLIDGYCKEEELDMAMEIKQ 315
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+++ G P+ + FN L+ + + GE+ ++ + G V ++ +I + +AG
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D A L + E G P Y +I+G R G+ +DA F ++ +G PN V+T
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
LI + G EM E G+ P + ++ + +GL C DL + + V +
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL--CRARDL-KSASGIVVEM 282
Query: 215 RS 216
RS
Sbjct: 283 RS 284
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 32/230 (13%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + ++ G + ++A +++ +M +G PD+ T+N LI ++C G+++ ++
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + V TY ILI A G ID+A RLL ++ G P Y I++G
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262
Query: 127 RRGQFDDAFCFFSEIK--------------------------------IKGHPPNRPVYT 154
+RG D AF F S + +KG PN Y+
Sbjct: 263 KRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYS 322
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
LI+ R G+ EA + L M E GL P + C+D + GK DLA
Sbjct: 323 VLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLA 372
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 5/215 (2%)
Query: 1 MSD---KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK 57
MSD KG P + +L+ L G A ++ M ++G +PD ++ LI CK
Sbjct: 306 MSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCK 365
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+V+ + + G D+ Y ++ ++ K G DEA + L E G P S
Sbjct: 366 EGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASS 425
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y + + G A E+ G P+R Y +LI+ R G EA L++M
Sbjct: 426 YNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDME 485
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P +++V GL C H + + IE L V
Sbjct: 486 RTEWQPTVISYNIVLLGL--CKAHRIVDAIEVLAV 518
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 98/217 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG NP D L+ G ++ A V+ MI G PD+ +N+++ ++CK G
Sbjct: 344 MKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGR 403
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + ++G + S+Y + A+ +G A ++ ++ +G +P Y
Sbjct: 404 ADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNS 463
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G D+A +++ P Y ++ + R V+A L M + G
Sbjct: 464 LISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNG 523
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P + L+ +G+ G A ++ + VS+ ++
Sbjct: 524 CQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMNAI 560
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P V L++GL + E A + V ++++Q DPD +N++I C+S
Sbjct: 103 MVKRGYKPDVILCTKLIKGLFTSKRTEKAVR-VMEILEQYGDPDSFAYNAVISGFCRSDR 161
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G DV TY ILI ++ G +D A +++ L+ED NP Y
Sbjct: 162 FDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTI 221
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+I+ G DDA E+ +G P+ Y ++ MC RG
Sbjct: 222 LIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRG 265
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G E+ +++++ MI +G +P++ T++ LI ++C+ G+ V++ + + G D Y
Sbjct: 297 GRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCY 356
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI A K G +D A + +++ G P Y I+ ++G+ D+A F +++
Sbjct: 357 DPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEE 416
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G PPN Y T+ G + A ++EM G+ P
Sbjct: 417 VGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDP 456
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K G EA L +V+ G+ P L +IKG F + + A ++ G P+
Sbjct: 89 KTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD-PDSF 147
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y +I+ R RF A ++ M G +P ++++ L GK DLA K+
Sbjct: 148 AYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V + ++ L A ++ A +++N M+K G PD T+NS++ C SG+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 61 --------------------VEFCVEMYYSVCKLGSCA----------------DVSTYK 84
V + + M Y +CK G C +++TY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDY-LCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
L+ + G + E LL +V +G +P +++ +I ++G+ D A FS+++ +
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G PN Y +I + + GR +A Y +M + GL+P + ++ + GL C K + A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 205 EKI 207
E++
Sbjct: 461 EEL 463
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P + L+ GL E A++++ +M+ +G + FNS+I++ CK G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G +V TY LI AG +DEA +LL +V G P Y+
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E++ G P+ Y ++ + R A + +TE G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++++ GL KN D + + L
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ---GSDPDLETFNSLIETICK 57
M++ G P V ++L++GL + + A ++++ M GS PD+ ++ ++I K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+ + Y+ + G DV TY +I A+ KA +D+A +L+ +V++G P
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y I+ G GQ +A F +++ G P+ Y+ L+ + GR +EA MT
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 178 EMGLTP 183
+ GL P
Sbjct: 329 KRGLKP 334
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V LL+ L G A+++ + M K+G P++ T+ +L++ G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 61 VEFCVEMYYSV---CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ VEM+ + + G D + ILI A +K G +D+A + + + G NP
Sbjct: 352 L---VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I + G+ +DA +F ++ +G P VY +LI ++ A ++EM
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ G+ + F+ + D G+ +EK+ +L V +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A +MI +G P +NSLI +C +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + G C + + +I + K G + E+ +L +V G P Y
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A S + G PN Y+TLI + R +A EM G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 577 VSPDIITYNIILQGL 591
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G PD F+ LI K G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G + TY +I + K+G +++A ++++G +P +Y
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +++ A E+ +G N + ++I + GR +E+ M +G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + +G GK D A K+
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKL 533
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ G G + A ++M+ +G PD+ T+NS+I +CK+ ++
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ ++ K G D TY ++ +G EA L + DG P Y+ ++
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +A F + +G P Y TL+ G VE L M G+ P
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
F ++ GK D A
Sbjct: 371 HYVFSILICAYAKQGKVDQA 390
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G AG ++ A ++++ M+ G P+ T+++LI CK +E
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D+ TY I++ + + A L + E G S Y I+ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ DDA F + + + +I + GR EA + + + GL P
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ L+ + + G L E+++QL +S+
Sbjct: 686 YWTYRLMAENIIGQG---LLEELDQLFLSM 712
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 81/178 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL +AK++ ++ + G+ +L T+N ++ +CK+
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++M+ ++C + + T+ I+I A+ K G DEA L +G P Y
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G + + ++ + G A YL + E
Sbjct: 692 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 75/175 (42%), Gaps = 1/175 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++ G + ++++ GL + A QM + + TFN +I+ + K G
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + TY+++ + G+++E +L ++ ++G +
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
I++ +RG+ A + S I K + I + GG++ E +L E
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYYRFLPE 780
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 5/156 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ D+ TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTY 90
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIK 142
ILI +AG +D F L N+++ G + P++KG + DA +
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G PN Y L+ R EA L M +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
>gi|260780430|gb|ACX50761.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780496|gb|ACX50794.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 188
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P ++ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 176
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGN 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV T+ +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 185
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ ++ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 37/145 (25%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ TF+ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVED 109
LI A +K G +DEA L + E+
Sbjct: 162 ALIDAFTKHGKVDEAMTLFKRMEEE 186
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 90/183 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + G E+A ++ +M G PD+ T++++I+ K G+
Sbjct: 247 MKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQ 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + G A++ TY I+I A +K G +EA LL + E+G P Y+
Sbjct: 307 WEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSS 366
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I ++GQ+++A E+ ++G PN Y +I+ C + GR+ EA + L EM G
Sbjct: 367 TISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG 426
Query: 181 LTP 183
+ P
Sbjct: 427 VPP 429
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + NA E A +++ M +G+ PD+ T++S I K
Sbjct: 177 MQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSR 236
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + S+ G +V Y I A K G + A LL + G P Y+
Sbjct: 237 WKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYST 296
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RGQ++ AF E+ KG N Y+ +I C + G++ EA L EM E G
Sbjct: 297 VIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG 356
Query: 181 LTP 183
+ P
Sbjct: 357 VAP 359
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 75/158 (47%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G A ++++M +QG PD + ++S I + + E VE+ S+ G+ DV TY
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I A +K EA LL ++ G P +Y+ I + GQ++ A E+
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
G P+ Y+T+I C + G++ A LMEM G+
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGV 322
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 85/202 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + + G+ E A ++ +M G PD ++ + I+ K
Sbjct: 527 MQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDR 586
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + +G D +Y+ + A S G+ EA LL +++ G +P Y
Sbjct: 587 WKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNS 646
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G++ +A ++ G P+ + I CG G ++ A L EM +G
Sbjct: 647 AINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALG 706
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
++P + K CG+ D
Sbjct: 707 VSPNEATYLTAMYACKRCGEKD 728
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + A E A ++ +M G P++ ++NS I+ K+G
Sbjct: 422 MQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGR 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE+ + G DV TY +I + + +EA L + G P
Sbjct: 482 SKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNT 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G +++A E+ G P+ Y T I C +G R+ E + L EM+ +G
Sbjct: 542 AINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVG 601
Query: 181 LTP 183
LTP
Sbjct: 602 LTP 604
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 76/183 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + +++ G E A ++ +M + G PD+ T++S I K G+
Sbjct: 317 MPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQ 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E V + + G + +Y I+I A +K G EA LL + G P Y+
Sbjct: 377 WEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSA 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + +++ A E+ G PN Y + I C + GR A L EM G
Sbjct: 437 AIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHG 496
Query: 181 LTP 183
L P
Sbjct: 497 LAP 499
Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 3/217 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +++ G A ++ +M G PD+ +++ I+ ++
Sbjct: 387 MPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASR 446
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + G +V +Y I A +K G A LL + G P Y+
Sbjct: 447 WEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSA 506
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I Q+++A F E++ +G P+ T I C +GG + EA + L EM MG
Sbjct: 507 VIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMG 566
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
L P + + D C K D ++I L + +V
Sbjct: 567 LVPDAISYRTAIDA---CAKGDRWKEIIDLLREMSTV 600
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 78/202 (38%), Gaps = 3/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ E A + +M +QG PD+ + N+ I + G
Sbjct: 492 MPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGW 551
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + +G D +Y+ I A +K E LL + G P Y
Sbjct: 552 WEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRF 611
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + +A ++ G P+ Y + I C +GGR+ EA L +M G
Sbjct: 612 AMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFG 671
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
L P F+ D CG D
Sbjct: 672 LAPDVNSFNAAIDA---CGNGD 690
Score = 40.0 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+A +L + E G P Y+ I Q++ A + + +G PP+ Y++ I
Sbjct: 169 KALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAI 228
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTP 183
C + R+ EA L M G+ P
Sbjct: 229 AACAKVSRWKEAVGLLRSMKGQGVKP 254
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 49/133 (36%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P + G + A ++ M+ G PD+ T+NS I K G
Sbjct: 597 MSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGR 656
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G DV+++ I A A +L + G +P + Y
Sbjct: 657 WKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLT 716
Query: 121 IIKGAFRRGQFDD 133
+ R G+ DD
Sbjct: 717 AMYACKRCGEKDD 729
>gi|341605687|gb|AEK82946.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK B A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEA 176
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRMEE 185
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G D+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ B+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVBEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G + Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSXFYSSLIDGLGKAGRIDEAERL 144
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ L + G + A+ + + MI++G PD T+ ++I+ K G
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 623
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + K G D Y L+ K +D+AF + +V G P +
Sbjct: 624 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G F+ G+ D AF F E+ K PP YT LI G+ GR EA + EM +
Sbjct: 684 LMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR 743
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
G+ P + + L G+ A+K+ + V L
Sbjct: 744 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 778
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P ++Q G +E+A +++ M K G PD +NSL++ K
Sbjct: 599 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 658
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V+ +Y + G + T+ +L+ + K G D AF L ++E P P+L Y
Sbjct: 659 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVP-PTLVSY 717
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ +AF F E+ +G P YT+LI + GR EA + +M +
Sbjct: 718 TILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 777
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+G+ P + + + GL + D A + Q
Sbjct: 778 LGVNPDVQAYSALITGLIDSSMVDTAWDVFQ 808
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K F P V ++ G AG L++ +++ +M+ G PD + LI+ +CK G V+
Sbjct: 118 KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E++ + K G D T+ LI A+S G +DEA L ++E G+ P+ + +I
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ D+A + + K +R Y +L+ + GR + L++M E P
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ ++++ G + D A ++ +L
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKL 324
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 7/199 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L N G L+ A ++ +MI++G +P LE +SLI +CK+G+V+ E+Y +V
Sbjct: 200 LIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKK 259
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
Y L+ K G +D+ +LL +VE + P Y ++ G R + DDA
Sbjct: 260 VATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDAL 319
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + G PN YTT+I R EA + E L IS + V GL
Sbjct: 320 ELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE----ALDVIS--YTTVIKGL 373
Query: 196 KNCGKHDLA-EKIEQLEVS 213
+ + D A E E+L+ +
Sbjct: 374 ADSKRIDEACELFEKLKTA 392
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + ++ GL + ++ A + N MI G +PD+ F +LI CK+G+
Sbjct: 46 MPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ 105
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K DV Y +I KAG +D F++L ++ G P + Y
Sbjct: 106 PQVGHMLLNQALKRFR-PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFV 164
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A+ F ++ G + + TLI G+ EA EM E G
Sbjct: 165 LIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P D + L GK D A +I Q V+
Sbjct: 225 YEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ P + +D L+ L AG ++ A ++ ++ + +NSL++ CK G
Sbjct: 220 MIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGR 279
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + + D+ TY IL+ S+A +D+A L L G P + Y
Sbjct: 280 VDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTT 339
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G + + ++A FF E + YTT+I R EA ++ G
Sbjct: 340 IIQGLYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAG 393
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+P + V DGL G+
Sbjct: 394 CSPNVVAYTAVIDGLLKAGR 413
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V ++ GLL AG +E + M P T+ +I+ +CK+ +
Sbjct: 393 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G D TY LI SKA +DEA +LL ++ G P Y I+ G
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ ++A ++++ +G P ++T+L++ GR EA L EMT G P
Sbjct: 513 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 572
Query: 185 SRCFDLVTDGLKNCGK 200
+ + D L + G+
Sbjct: 573 VILYTSLIDLLFSTGR 588
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 6/200 (3%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++ ++LV G A L+ A ++ + G P+ T+ ++I+ + + +E
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ DV +Y +I ++ + IDEA L L G +P Y +I G +
Sbjct: 357 F------DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +D F ++ P R YT +I + +A +M + G P +
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + DG K D A K+
Sbjct: 471 YTTLIDGFSKASKMDEARKL 490
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI-KQGSDPDLETFNSLIETICKSG 59
M G P ++L+ GL G + A + +M+ K P L ++ LI+ + K+G
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAG 728
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V + + G + TY LI +++KAG I EA +L+ ++V+ G NP Y+
Sbjct: 729 RVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 788
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I G D A+ F E+ +G PN Y L
Sbjct: 789 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G A ++ A+++++ M+ +G +P T+ S++ CK
Sbjct: 459 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + + G + + L+ G +EA+++L + G P LY
Sbjct: 519 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 578
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEM 179
+I F G+ +A F + KG P+ Y T+I + G VEAA ++E M +
Sbjct: 579 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN-VEAAGEILELMAKS 637
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
G+ P ++ + DG + D A
Sbjct: 638 GVGPDCFAYNSLMDGYVKLERVDQA 662
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 6/195 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G P ++QGL +A +E AK ++ + D+ ++ ++I+ + S
Sbjct: 325 LSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKR 378
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G +V Y +I + KAG I++ + ++ P + Y
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTV 438
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + DA F ++ KG P+ YTTLI + + EA L M G
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 498
Query: 181 LTPISRCFDLVTDGL 195
P + + + G
Sbjct: 499 PEPTAVTYGSIVHGF 513
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L+ GL AG + A +MI +G P+ T+ SLI ++ K+G + ++
Sbjct: 712 PTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 771
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ KLG DV Y LI + + M+D A+ + +++ G P Y + +G FR
Sbjct: 772 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG-FR 830
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+E A + +M G PD+ N ++ +CK+ +++ +E++ + +G + +Y
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I ++ +DEA++ ++++++G P + +I G + GQ ++ +K
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKR 119
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ +YT++I + G L EM G P + + ++ D L G+ D A
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 206 KI 207
++
Sbjct: 180 EL 181
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+ L AG + AK++V M+K G +PD++ +++LI + S
Sbjct: 740 MIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSM 799
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
V+ +++ + K G + TYK+L AG
Sbjct: 800 VDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ G + A+ + M G PDL T++ L+ET K
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + GS D+++Y +L+ A +K+G I EA + H + G P + Y+
Sbjct: 298 LEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G++DD F E+K P+ Y LI + G GG F E +M E
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P ++ + G H+ A KI Q
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQ 446
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D G P + LV+ LE ++++M GS PD+ ++N L+E KSG
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +++ + G + +TY +L+ ++G D+ +L + +P + Y
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G F + F ++ + P+ Y +I CG+GG +A L MT
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S+ + V + ++ A
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEA 476
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ +G + +Q+ +M +DPD T+N LIE + G
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V +++ + + D+ TY+ +I A K G+ ++A ++L + + P Y
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + +++A F+ + G P+ Y +L+ RGG E+ L + + G
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ F+ + K GK + A K
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVK 548
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + ++L++ +G ++ A + ++M G P+ T++ L+ +SG
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + D +TY ILI + G E L H++VE+ P Y
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G +DA + P+ YT +I G+ + EA M E+G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 181 LTP 183
P
Sbjct: 488 SNP 490
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +P ++L++ GY + + + M+++ +PD+ET+ +I K G
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + Y +I A +A + +EA + + E G NP Y
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHS 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G ++ S + G P NR + I +GG+F EA ++M +
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 181 LTPISRCFDLV 191
P R + V
Sbjct: 558 CDPDERTLEAV 568
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P+ + +I + + G ++ C+E++ + G V +Y LI A + G + + L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRG-QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
L + D +P Y +I R G ++ F+E++ +G P+ Y TL++ C
Sbjct: 199 LDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG--LKNCGKHDLAEKIEQL 210
G EA M + G+ P DL T ++ GK EK+ L
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVP-----DLTTYSHLVETFGKLRRLEKVSDL 304
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G NP + L+ G ++ ++ ++++++ G + +TFN+ IE + G+
Sbjct: 483 MHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
E V+ Y + K D T + ++ S A ++DE
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE 580
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S G P ++++ L + + ++ M+K G +P + TF LI +C G+V
Sbjct: 103 SSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDV 162
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
VE+ V K G +DV TY +LI + K G EA L + E NP +Y+ +
Sbjct: 163 GRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTV 222
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G + G +A E+ KG PN YT LI GR+ EA + L EM +MG+
Sbjct: 223 MDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGV 282
Query: 182 TPISRCFDLVTDGLKNCGK 200
P + +++ D L GK
Sbjct: 283 MPDLQSLNILVDVLCKEGK 301
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P + L+QGL N G + A ++++M+K G PDL++ N L++ +CK G+
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G DV TY LI +DEA R+ +V G P Y
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + A E+ G P+ +TTLI + GR + A + M + G
Sbjct: 362 LIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYG 421
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + ++ DGL C L+E +
Sbjct: 422 QVPNLQTCAIILDGL--CKSQLLSEALS 447
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G + A ++++MIK G PD+ T+ +LI C+ G
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++ ++ K G ++ T I++ + K+ ++ EA L H + + + +Y+
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSI 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G G+ + A FS + KG N YT +I + G +A + L M E G
Sbjct: 467 ILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENG 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P S +++ GL + ++A I+ L
Sbjct: 527 CMPDSCTYNVFVQGL--VAEREIARSIKYL 554
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +NP V ++ GL G + A + +M +G P+L T+ LI+ +C G
Sbjct: 207 MEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGR 266
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K+G D+ + IL+ + K G I +A ++ ++ G P Y
Sbjct: 267 WKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNS 326
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + Q D+A F + +G P+ YT+LI + +A + L EM ++G
Sbjct: 327 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 386
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP + + G G+
Sbjct: 387 FTPDVVTWTTLIGGFCQVGR 406
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ ++LV L G + AK ++ MI G PD+ T+NSLI+ C +
Sbjct: 277 MMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQ 336
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ Y LI K I++A LL +++ G P +
Sbjct: 337 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 396
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F + G PN ++ + EA + M +
Sbjct: 397 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 456
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L + ++ DG+ + GK + A
Sbjct: 457 LDLNIVIYSIILDGMCSAGKLNTA 480
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +L+ GL G + A ++V+ + K G D++T+ LI +CK G+
Sbjct: 141 GLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEA 200
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V + + +V Y ++ + K G++ EA L + G P Y +I+G
Sbjct: 201 VGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQG 260
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G++ +A E+ G P+ L+ + + G+ ++A + + M +G P
Sbjct: 261 LCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPD 320
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + D + D A ++ +L VS
Sbjct: 321 VFTYNSLIDRYCLQNQMDEATRVFELMVS 349
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 1/206 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P V L+ G G +AK++ M K G P+L+T +++ +CKS
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQL 441
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++++ K ++ Y I++ + AG ++ A L L G Y
Sbjct: 442 LSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTI 501
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G D A S ++ G P+ Y + + YL M + G
Sbjct: 502 MINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKG 561
Query: 181 LTPISRCFDLVTDGLK-NCGKHDLAE 205
+ + +++ + L N G ++L E
Sbjct: 562 FSVDATTTEMIINYLSTNQGDNELRE 587
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ LE A ++ N M+ PDL T+N++I + G
Sbjct: 321 GIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREA 380
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G D TY L+ A ++ G +D+ + ++V+ G Y II
Sbjct: 381 GRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHM 440
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+RGQ D AF +S++K+ G P+ YT LI G+ EAA + EM + P
Sbjct: 441 YGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPT 500
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
R F + G GK AE E + LRS
Sbjct: 501 LRTFSALICGYAKAGKRVEAE--ETFDCMLRS 530
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV--EFCVEMYYSVCKLGSCADVS 81
G +++++ M +G +PDL +FN+LI KSG + +E+ V + G D+
Sbjct: 268 GRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDII 327
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY LI A S+ ++EA ++ +++V P Y +I R G +A F ++
Sbjct: 328 TYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDL 387
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ KG P+ Y +L+ R G + +M +MG ++ + G+H
Sbjct: 388 ESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQH 447
Query: 202 DLA 204
DLA
Sbjct: 448 DLA 450
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KGF P + L+ G ++ K++ M+K G D T+N++I K G+
Sbjct: 387 LESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQ 446
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + G D TY +LI ++ KA MI EA ++ ++ P ++
Sbjct: 447 HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSA 506
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + G P+ Y+ ++ + R +A EM
Sbjct: 507 LICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHS 566
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++++ L+ GK + E + ++
Sbjct: 567 FKPDHALYEVM---LRVLGKENREEDVHKV 593
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 81/207 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + +++ L + + MV++M PDL +NS+++ G+
Sbjct: 910 MKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGD 969
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + + G D TY LI + +E L+H + G P Y
Sbjct: 970 FKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKS 1029
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + A F + K +R Y ++ M G +A L M E G
Sbjct: 1030 LISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAG 1089
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P L+ G+ + AEK+
Sbjct: 1090 VEPTIATMHLLMVSYSGSGQPEEAEKV 1116
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 38/230 (16%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ +G E A+ + N M++ G P +++ N L++ + G ++ + + +G
Sbjct: 820 LIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMG 879
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII----KGAFRR--- 128
S+ +++ A + AG I E ++ + G+ P LY +I KG R
Sbjct: 880 FKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVE 939
Query: 129 ----------------------------GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
G F + I+ G P+ Y TLI M
Sbjct: 940 AMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMY 999
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
R R E + + EM +GL P D + GK + E+ E+L
Sbjct: 1000 CRDRRPEEGLSLMHEMRRVGLEP---KLDTYKSLISAFGKLQMVEQAEEL 1046
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P + + +++ G + Q+ + + G PD +T+N+LI C+ E +
Sbjct: 950 FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGL 1009
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + ++G + TYK LI A K M+++A L L+ S Y ++K
Sbjct: 1010 SLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMF 1069
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G A +K G P L+ G+ EA L + GL +
Sbjct: 1070 RNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLST 1129
Query: 186 RCFDLVTDGLKNCGKHDLA 204
+ V D G H++A
Sbjct: 1130 LPYSSVIDAYLKNGDHNVA 1148
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 96/183 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M+ S+ K G +++TY L+ + G + E LL +V +G +P +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ D A FS+++ +G P+ Y T+I + + GR +A Y +M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 LTP 183
L+P
Sbjct: 440 LSP 442
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M+ G P V ++L++GL + + A +++ M G D PD+ ++ ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+++ Y+ + G +V TY +I A+ KA +D+A +L ++V++G P Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A F ++ G P+ Y +L+ + GR EA MT+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 MGLTP 183
GL P
Sbjct: 333 RGLKP 337
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Query: 3 DKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
D G PP V ++ G G L+ A ++M+ +G P++ T++S+I +CK+ +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +E+ S+ K G + TY ++ +G EA L + DG P Y +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + G+ +A F + +G P Y TL+ G VE L M G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P F ++ GK D A
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQA 393
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G P+ F+ LI K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D TY +I + K+G +++A R ++++ +P +Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I ++D A +F + I+
Sbjct: 450 LIHSLCIFDKWDKAKDYFLKCWIEA 474
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 14/186 (7%)
Query: 11 RGRDLLVQGLLNAGYLESAKQ-------MVNKMIKQGSD---PDLETFNSLIETICKSGE 60
RGR + GL N + A+ N+M + G+D P+L T+ LI + C +G
Sbjct: 48 RGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGR 106
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL-LHNLVEDGHNPFPSLYA 119
++ +V K G D + L+ + +A + L + + G P Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
++KG + +A + G PP+ YTT+I + G +A EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 178 EMGLTP 183
+ G+ P
Sbjct: 227 DRGILP 232
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ ++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTY 94
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIK 142
ILI + AG +D F L N+++ G + P++KG + DA +
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
G PN Y L+ R EA L M + G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDG 192
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L++GL +A E ++++ +M + D TFN L++ C++G
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 479
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG ++ DA S++ +G P N + TLI + G +A L +M G
Sbjct: 480 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 539
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK D E +E L V
Sbjct: 540 CSPDLISYSTVIDGLGKAGKTD--EALELLNV 569
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P ++++GL +A A+ ++++MI+QG + TFN+LI +CK G
Sbjct: 465 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 524
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG DEA LL+ +V G +P +Y+
Sbjct: 525 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 584
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R G+ + F I+ + +Y +I+ + G A +L M G
Sbjct: 585 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 644
Query: 181 LTPISRCFDLVTDGLKNCG 199
P + ++ GL + G
Sbjct: 645 CVPNESTYTILIRGLASEG 663
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L G + A ++++M ++G P ++ ++E C+ G V + + G
Sbjct: 165 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 224
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV +++ A+ G +DEA LL +L G P Y ++KG ++
Sbjct: 225 CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 284
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ PPN + TLI+ R G F L +M E G TP R + + DG+
Sbjct: 285 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGI 344
Query: 196 KNCGKHDLAEKI 207
G ++A +I
Sbjct: 345 CKEGHLEVAHEI 356
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 87/187 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M++ G PD+ T+ ++I CK G ++ V + S+
Sbjct: 408 NILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 467
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + A +A L+ +++ G P + +I ++G +
Sbjct: 468 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 527
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G++P + + +
Sbjct: 528 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 587
Query: 194 GLKNCGK 200
L G+
Sbjct: 588 ALSREGR 594
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L++ + + G ++ A ++ + G +PD+ ++N++++ +C + E+ + +
Sbjct: 233 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 292
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ ++ T+ LI + + G+ + +L +VE G P +YA II G + G +
Sbjct: 293 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 352
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + + G PN Y TL+ R+ E L EM + F+++ D
Sbjct: 353 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 412
Query: 194 GLKNCGKHD-LAEKIEQL 210
G D + E +EQ+
Sbjct: 413 FFCQNGLVDRVIELLEQM 430
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + +++GL A ++++ +M++ P++ TFN+LI +C++G E
Sbjct: 259 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 318
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + G D+ Y +I + K G ++ A +L+ + G P Y ++KG
Sbjct: 319 HEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 378
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++++ +E+ K P + + L+ + G L +M E G P
Sbjct: 379 LCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPD 438
Query: 185 SRCFDLVTDG 194
+ V +G
Sbjct: 439 VITYTTVING 448
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ G G ++ A ++ M G P+ ++ +++ +C +
Sbjct: 430 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 489
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + T+ LI + K G++++A LL ++ +G +P Y+
Sbjct: 490 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 549
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+I G + G+ D+A + + KG PN +Y+++ + R GR
Sbjct: 550 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 595
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P + L G + QM + + D +N++I ++CK GE
Sbjct: 570 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 629
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
E +E + G + STY ILI ++ G + EA +L L G
Sbjct: 630 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---LYAPIIKGAFRRGQFDDAFCFFS 139
Y ++ +AG ++ A RL + P P Y P+++ RG+ DA
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV------PVPPNAYTYFPVVRALCARGRIADALAVLD 183
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
E+ +G P P+Y ++ RGG F A L ++ G
Sbjct: 184 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 224
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K NP V ++L+ G + A+ M N M+K+G PD+ TFN+LI C G
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ +V + G DV +Y ILI K IDEA L + + LY+
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-----------------TMCGRG 163
+I G + G+ A+ FS I G PPN Y LI MCG+G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464
Query: 164 ------------------GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
R EA N L M L P S ++ + DGL G+
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G +P + L++G G KQ++ +M+ + +P++ TFN LI+ C+ G++
Sbjct: 252 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 311
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
M+ + K G D+ T+ LI G + EA +L + E G P Y +I
Sbjct: 312 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 371
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + D+A F+E++ K + +Y++LI + GR A + G
Sbjct: 372 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP 431
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P ++++ D C D+ IE ++
Sbjct: 432 PNVITYNILIDAF--CKIQDIDMGIELFKL 459
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++G P V +L+ G ++ A + N+M + D+ ++SLI+ +CKSG +
Sbjct: 357 ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRIS 416
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ E++ ++ G +V TY ILI A K ID L + G P Y +I
Sbjct: 417 YAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 476
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + +A S ++ K P+ Y +L + GR +A L ++ +G
Sbjct: 477 NGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWE-LFKVMHVGGP 535
Query: 183 PIS-RCFDLVTDGLKNCGKHDLA 204
P+ ++++ D C D+A
Sbjct: 536 PVDVATYNVLLDAF--CKAQDVA 556
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G A Q++ +M Q P++ +N +I++ CK ++Y + +G
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 254
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY LI + G E +L+ +V NP + +I R+G+ +A
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ + +G P+ + TLI+ G +EA + E G+ P + ++ G
Sbjct: 315 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 374
Query: 196 KNCGKHDLA 204
C + D A
Sbjct: 375 CKCKRIDEA 383
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + + + G + A ++ ++K+G P+ T ++++ +C +GE
Sbjct: 110 MVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGE 169
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + +V G D Y LI + K G +AF+LL + P +Y
Sbjct: 170 VQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNM 229
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + A + +I G P+ YT+LI R G++ E + EM
Sbjct: 230 IIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN 289
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P F+++ D GK A+ + L V
Sbjct: 290 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G + + A +++ M + PD T+NSL + +CKSG
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
+ E++ + G DV+TY +L+ A KA
Sbjct: 520 ISDAWELFKVMHVGGPPVDVATYNVLLDAFCKA 552
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 4/191 (2%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A + N +I P + FN++I ++ K + + + G + T I
Sbjct: 65 IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
I G + AF +L +++ G+ P ++KG G+ A F + +G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL----KNCGKH 201
+ Y TLI + GR ++A L EM + P ++++ D C
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244
Query: 202 DLAEKIEQLEV 212
DL KI + +
Sbjct: 245 DLYLKIVDMGI 255
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 74/176 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ ++ + A ++ +M+ +G P + T + I C GE+ F +
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
V K G + T ++ + G + +A N+ G Y +I G +
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ DAF E++ + PN +Y +I + +A + +++ +MG+ P
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDP 257
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ LE A ++ N M+ PDL T+N++I + G
Sbjct: 264 GIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREA 323
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G D TY L+ A ++ G +D+ + ++V+ G Y II
Sbjct: 324 GRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHM 383
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+RGQ D AF +S++K+ G P+ YT LI G+ EAA + EM + P
Sbjct: 384 YGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPT 443
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
R F + G GK AE E + LRS
Sbjct: 444 LRTFSALICGYAKAGKRVEAE--ETFDCMLRS 473
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV--EFCVEMYYSVCKLGSCADVS 81
G +++++ M +G +PDL +FN+LI KSG + +E+ V + G D+
Sbjct: 211 GRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDII 270
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY LI A S+ ++EA ++ +++V P Y +I R G +A F ++
Sbjct: 271 TYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDL 330
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ KG P+ Y +L+ R G + +M +MG ++ + G+H
Sbjct: 331 ESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQH 390
Query: 202 DLA 204
DLA
Sbjct: 391 DLA 393
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KGF P + L+ G ++ K++ M+K G D T+N++I K G+
Sbjct: 330 LESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQ 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + G D TY +LI ++ KA MI EA ++ ++ P ++
Sbjct: 390 HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSA 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + G P+ Y+ ++ + R +A EM
Sbjct: 450 LICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHS 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++++ L+ GK + E + ++
Sbjct: 510 FKPDHALYEVM---LRVLGKENREEDVHKV 536
>gi|341605689|gb|AEK82947.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G Y+ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK B A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEA 176
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY ++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRMEE 185
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G D+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ B+A F ++ + ++ VYT I + G
Sbjct: 162 ALIDALTKHGKVBEAMTLFKRME-EEEGCDQTVYTYTILISG 202
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G + Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
>gi|260780426|gb|ACX50759.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780428|gb|ACX50760.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780432|gb|ACX50762.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780434|gb|ACX50763.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780436|gb|ACX50764.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780438|gb|ACX50765.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780440|gb|ACX50766.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780442|gb|ACX50767.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780444|gb|ACX50768.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780446|gb|ACX50769.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780448|gb|ACX50770.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780450|gb|ACX50771.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780452|gb|ACX50772.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780454|gb|ACX50773.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780456|gb|ACX50774.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780458|gb|ACX50775.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780460|gb|ACX50776.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780462|gb|ACX50777.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780464|gb|ACX50778.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780466|gb|ACX50779.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780470|gb|ACX50781.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780472|gb|ACX50782.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780474|gb|ACX50783.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780476|gb|ACX50784.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780478|gb|ACX50785.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780480|gb|ACX50786.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780482|gb|ACX50787.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780486|gb|ACX50789.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780488|gb|ACX50790.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780490|gb|ACX50791.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780492|gb|ACX50792.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780494|gb|ACX50793.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780498|gb|ACX50795.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780500|gb|ACX50796.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780502|gb|ACX50797.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780504|gb|ACX50798.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P ++ ++ G + G+ ++A +F + G N
Sbjct: 64 KSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D GK D A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 176
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGN 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV T+ +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 185
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G P+ ++ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 37/145 (25%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ TF+ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKL------------------------------------GSCADVSTYK 84
VE ++ Y+ C+ G D Y
Sbjct: 103 VEEALD-YFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVED 109
LI A +K G +DEA L + E+
Sbjct: 162 ALIDAFTKHGKVDEAMTLFKRMEEE 186
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P + L+QGL N G + A ++++M+K G PDL+ N L++ CK G+
Sbjct: 243 MNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGK 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G DV TY LI ++EA R+ H +V G P ++
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTS 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + A E+ G P+ +TTLI + GR + A + M + G
Sbjct: 363 LIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYG 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + ++ DGL C ++ L+E +
Sbjct: 423 QVPNLQTCAVILDGL--CKENLLSEAVS 448
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
++ M K G +P + T +LI +C G V V + + K+ DV TY +LI +
Sbjct: 133 SVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGL 192
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
K G A L + E P +Y+ I+ G + G +A SE+ KG PN
Sbjct: 193 CKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNL 252
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
Y LI GR+ EA + L EM +MG+ P + +++ D GK
Sbjct: 253 VTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGK 302
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ + P V ++ GL G + A + ++M +G P+L T+ LI+ +C G
Sbjct: 208 MEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGR 267
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K+G D+ IL+ A K G + +A ++ ++ G P Y
Sbjct: 268 WKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNS 327
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + ++A F + +G P+ V+T+LI + +A + L EM++MG
Sbjct: 328 LIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMG 387
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + G G+
Sbjct: 388 FVPDVATWTTLIGGFCQAGR 407
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P V L+ G AG +AK++ M K G P+L+T +++ +CK
Sbjct: 383 MSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENL 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + ++ K ++ Y IL+ + AG ++ A+ L +L G +Y
Sbjct: 443 LSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTI 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG ++G D A ++ G PN Y + + YL M + G
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562
Query: 181 LT 182
+
Sbjct: 563 FS 564
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ ++LV G + AK ++ MI G PD+ T+NSLI C +
Sbjct: 278 MMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNK 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D+ + LI K I++A LL + + G P + +
Sbjct: 338 MNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTT 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F + G PN ++ + EA + M +
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSN 457
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + ++ DG+ + GK + A ++
Sbjct: 458 LDLNIVIYSILLDGMCSAGKLNAAWEL 484
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 37/222 (16%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ A ++ + M+ +G PD+ F SLI CK + + + + K+G DV+T+
Sbjct: 338 MNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTT 397
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS----------------------------- 116
LI +AG A L N+ + G P
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSN 457
Query: 117 ------LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
+Y+ ++ G G+ + A+ FS + KG N +YT +I + G +A
Sbjct: 458 LDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAE 517
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ L+ M E G P + +++ GL K ++A I+ L +
Sbjct: 518 DLLINMEENGCLPNNCTYNVFVQGLLT--KKEIARSIKYLTI 557
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + ++ G + A ++ +M ++G PD+ TFNS I + SG
Sbjct: 483 MPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGR 542
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + + G AD TY + ++ AG ++A LL + G +P Y
Sbjct: 543 PDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTA 602
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G+ D+A E+ G PN Y+ I+ CG+ GR+ + L EM +G
Sbjct: 603 AIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALG 662
Query: 181 LTPISRCFDLVTDGLKNCG 199
LTP C+ T + CG
Sbjct: 663 LTPNEFCY---TAAITGCG 678
Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + + L N+G + A +++ +M + G D T++S + + +G
Sbjct: 518 MPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGR 577
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + G V Y I A +AG DEA LL + G P Y+
Sbjct: 578 WEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSA 637
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+++ +E+ G PN YT IT CG GG++ A M G
Sbjct: 638 TISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASG 697
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + L +CG+ DLA
Sbjct: 698 IQPTVVGYTSAVSALAHCGEVDLA 721
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 72/155 (46%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ M K+G P + ++N++I K GE + + + + + G DV T+ I
Sbjct: 476 ALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIA 535
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A+S +G D+A RL+ + G Y+ + G G+++ A E++ G P
Sbjct: 536 ALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSP 595
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
YT I CG G+ EA L EM G+TP
Sbjct: 596 TVICYTAAIRACGEAGKGDEALLLLREMPTAGVTP 630
Score = 62.8 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVE 66
P V +L + + G E A +++ M + G +PD+ T+N ++ K+G+ E +E
Sbjct: 298 PNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIE 357
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + ++G DV ++ I A G+ +EA + + G P + ++
Sbjct: 358 IFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACI 417
Query: 127 RRGQFDDAFCFFSEIKIKG----------------HPPNRPVYTTLITMCGRGGRFVEAA 170
GQ+++A FF+E+ + Y T ++ C G ++ A
Sbjct: 418 AAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRAL 477
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ L +M + G+ P+ ++ V CG+ D A
Sbjct: 478 SLLRDMPKRGVKPVVISYNTVISACGKCGEGDQA 511
Score = 59.7 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 1/179 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK-LGSCADVS 81
G E A MI G P + + S + + GEV+ +E+ + + G +
Sbjct: 680 GGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQ 739
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY +I A G ++ ++ G P + Y I+ + G + +A E+
Sbjct: 740 TYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEM 799
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ G PP Y IT CG+ G++ EA + L EM GL S + G+
Sbjct: 800 EAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAISACQKAGR 858
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V ++ AG + A ++ +M G P+L ++++ I K G
Sbjct: 588 MQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGR 647
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + LG + Y I G + A +++ G P Y
Sbjct: 648 WEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTS 707
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ G+ D A SE+K + G PN Y +I CG GG+ A +M
Sbjct: 708 AVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASA 767
Query: 180 GLTP 183
G+TP
Sbjct: 768 GITP 771
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V +Y +I A K G D+A LL + E G P + I G+ DDA
Sbjct: 492 VISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMR 551
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
E+ G + Y++ +T GR+ +A + L EM G++P C+ T ++ CG
Sbjct: 552 EMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICY---TAAIRACG 608
Query: 200 K 200
+
Sbjct: 609 E 609
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ +M + G+ P+ N+ ++ K+G V+ + + G DV +Y IP
Sbjct: 143 ALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIP 202
Query: 89 AVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
A G + A ++ + E G P Y IK R G+ D+A E+K G P
Sbjct: 203 ACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVP 262
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
VY+ + R + AA+ L E+ + + P ++L +CG+ + A
Sbjct: 263 LKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEA 319
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 42/222 (18%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV-CKLGSCADVS 81
AG ++ A ++ G + D+ ++N I G+ E + M + + G +
Sbjct: 172 AGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHI 231
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR------------- 128
TY+ I + G DEA LL + +DG P + + AFRR
Sbjct: 232 TYQAAIKVCGRCGKADEAASLLIEM-KDGGVPLKTSVYSAVFNAFRRVDHWQAAASTLRE 290
Query: 129 -----------------------GQFDDAFCFFSEIK-IKGHPPNRPVYTTLITMCGRGG 164
G++++A ++ + G P+ Y ++ CG+ G
Sbjct: 291 IHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAG 350
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
+ +A EM+E+G+ P F T + CG L+E+
Sbjct: 351 QGEKAIEIFREMSEVGIKPDVISF---TTAISACGSCGLSEE 389
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + LV+GL G + A Q++N+M ++G PD++T+N +I +CK G +
Sbjct: 355 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 414
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ G DV T+ LI K +D A +L+ + E G P Y ++
Sbjct: 415 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 474
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ ++ F E+ +KG PN Y LI R + EA+ +++M++ GL P
Sbjct: 475 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 534
Query: 184 ISRCFDLVTDGLKNCGKHDL 203
+ F+ + G C DL
Sbjct: 535 DAVSFNTLIYGF--CRNGDL 552
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ ++GL AG L A ++V+ M + + PD+ T+N+LI +CK + + +
Sbjct: 226 NIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 284
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY +I K M+ EA LL + V G P Y +I G G +
Sbjct: 285 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 344
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F+E + KG P+ VY +L+ G + A + EM E G P + +++V +
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404
Query: 194 GLKNCG 199
GL G
Sbjct: 405 GLCKMG 410
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G +P ++ ++++ GL G + A ++N I +G PD+ TFN+LI+ CK +
Sbjct: 387 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 446
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G D TY ++ + KAG ++E ++ G +P P Y
Sbjct: 447 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R + ++A ++ +G P+ + TLI R G A ++ E G
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + F+ + +AEKI
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKI 593
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + ++ G ++ A +++ + +G PD T+ SLI +C G+
Sbjct: 282 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E++ G D+ Y L+ + G+I A ++++ + E+G +P Y
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DA ++ +KG+ P+ + TLI + + A + M E G
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++ V +GL GK
Sbjct: 462 IAPDTITYNSVLNGLCKAGK 481
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P L+ GL G +E A ++ N+ +G PD+ +NSL++ +C G +
Sbjct: 320 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILH 379
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ TY I+I + K G I +A ++++ + G+ P + +I
Sbjct: 380 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 439
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G +R + D A + G P+ Y +++ + G+ E EM G P
Sbjct: 440 GYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 499
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++++ + K + A K+
Sbjct: 500 NPITYNILIENFCRSNKMEEASKV 523
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +P ++L++ + +E A +++ KM ++G PD +FN+LI C++G++E
Sbjct: 495 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 554
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G A T+ LI A S + A ++ ++ GH Y +I
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 614
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ + D A+ E+ KG P+ + +I R +A + M ++G+ P
Sbjct: 615 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
V D + N K ++A
Sbjct: 675 ------EVVDTILNADKKEIA 689
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL G+ A+Q+ ++M+ P+L FN ++ +CK G+V + V + G
Sbjct: 158 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 217
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF--PSL--YAPIIKGAFRRGQF 131
++ TY I I + +AG + EA RL+ DG + P + Y +I+G ++
Sbjct: 218 MSINLFTYNIWIRGLCEAGRLPEAVRLV-----DGMRAYAVPDVVTYNTLIRGLCKKSMP 272
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+A + + +G P+ Y T+I + EA L + G P + +
Sbjct: 273 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 332
Query: 192 TDGLKNCGKHDLAEKIE 208
+GL C + D+ +E
Sbjct: 333 INGL--CAEGDVERALE 347
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G +P + L+ G G LE A + K+ ++G +TFN+LI
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 586
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G AD TY++LI K +D A+ L +++ G P S +
Sbjct: 587 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 646
Query: 121 IIKG 124
+I
Sbjct: 647 VINS 650
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 82/218 (37%), Gaps = 32/218 (14%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ L++A Y + A ++ +M+ G PDL T + + C + + +
Sbjct: 84 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 143
Query: 68 YYSVCKLGSCA-------------------------------DVSTYKILIPAVSKAGMI 96
++ G+ A +++ + ++ A+ K G +
Sbjct: 144 LRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 203
Query: 97 DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
EA LL +++ G + Y I+G G+ +A ++ P+ Y TL
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTL 262
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
I + EA +YL M G P ++ + DG
Sbjct: 263 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDG 300
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G L+ G A ++A+ + +M+ G PD+ T+N L++ +C +G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++ + K D+ TY +I A+ KAG +++ + L +L G P Y
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R+G ++A F E+K G PN Y TLI R G +A + EM G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 181 LTPISRCFDLVTDGLKN 197
+ F LVT+ L +
Sbjct: 562 FAGDASTFGLVTNMLHD 578
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + + L+ G + + A +V++M++ G PD TF +L+ + + +
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D+ TY +I + K G D A LL+ + + +Y
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDAF F++++ KG P+ Y LI+ GR+ +A+ L +M E
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F+ + D GK AEK+
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P LV GL A +V +M+ +G PDL T+ ++I +CK GE
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + K ADV Y +I + K +D+AF L + + G P Y P
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G++ DA S++ K P+ + LI + G+ VEA EM +
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 37/247 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
M +K NP + + L+ + G L A+++ ++M+K + PD+ +N+LI+ CK
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------ 113
VE +E++ + + G + TY LI +A D A + +V DG +P
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 114 ------------------FPSL-----------YAPIIKGAFRRGQFDDAFCFFSEIKIK 144
F + Y +I+ + G+ +D + F + +K
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD-LVTDGLKNCGKHDL 203
G PN YTT+++ R G EA +EM E G P S ++ L+ L++ +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 204 AEKIEQL 210
AE I+++
Sbjct: 551 AELIKEM 557
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ GL G + A ++NKM K + D+ +N++I+ +CK
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G DV TY LI + G +A RLL +++E NP +
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G+ +A + E +K K P+ Y TLI + R E EM++
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
GL + + + G D A+ + + VS
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ L N G A ++++ M+++ +PDL FN+LI+ K G+
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 61 VEFCVEMYYSVCKLGSC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ ++Y + K C DV Y LI K ++E + + + G Y
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME 175
+I G F+ D+A F ++ G P+ Y L+ +C G VE A + E
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN--VETALVVFE 450
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M G +L T++ I C+ ++ + + + KLG + T L+
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
I EA L+ +VE G+ P + ++ G F+ + +A + +KG P+ Y
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 155 TLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+I +C RG + A N L +M + + ++ + DGL
Sbjct: 220 AVINGLCKRGEPDL-ALNLLNKMEKGKIEADVVIYNTIIDGL 260
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L + +L L+ A + M+K P + F+ L+ I K + + + + +
Sbjct: 43 RENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 102
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
LG ++ TY I I + + A +L +++ G+ P ++ G +
Sbjct: 103 NLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 162
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A ++ G+ P+ +TTL+ + + EA + M G P + V
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 193 DGLKNCGKHDLA 204
+GL G+ DLA
Sbjct: 223 NGLCKRGEPDLA 234
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P L+ G +E A + N MI +G P++ T+N LI +C+ G+
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGD 383
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + ADV TY ILI ++ K G +A +LL + E G NP Y
Sbjct: 384 VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNT 443
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G A + ++ KG N + LI GR +A L EM E G
Sbjct: 444 LMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERG 503
Query: 181 LTPISRCFDLVTD 193
L P ++++ +
Sbjct: 504 LVPNRTTYEIIKE 516
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++L+ GL + G ++ A + ++M+ +P++ T N LI CK+
Sbjct: 254 MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + K G + TY LI A K G +++AF L + +++ G P S Y
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G A +E+ K + Y LI + G +A L EM E G
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433
Query: 181 LTPISRCFDLVTDG 194
L P ++ + DG
Sbjct: 434 LNPSHVTYNTLMDG 447
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G + A ++ +M +QG P++ T+N LI +C G+
Sbjct: 219 MVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGK 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + +V T+ +LI K ++EA L +++ + G +P Y
Sbjct: 279 VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTT 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +DAF ++ + +G P Y LI R G A + + EM
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+ ++++ D L G+ A K+
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKL 425
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 5/206 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQG---LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK 57
M G +P V + L+ G + G + A ++ +M+ +G P+ T+N LI+ CK
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK 240
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
V + ++ + + G +V TY ILI + G +DEA L +V P
Sbjct: 241 DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+ +I G + ++A F++++ +G PN YTTLI + GR +A M
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI 360
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDL 203
+ G+ P ++ + GL C K D+
Sbjct: 361 DRGIFPEVSTYNCLIAGL--CRKGDV 384
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 5/208 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF + + L+ GL+ + + +MIK+ + ++ +FN ++ +CK G++
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR---LLHNLVEDGHNPFPSLYA 119
++ + G +V TY LI K G I + ++ +L +V G P Y
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYN 232
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + A F E++ +G PN Y LI G+ EA +M
Sbjct: 233 ILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS 292
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P +++ +G C + E I
Sbjct: 293 DLEPNVVTHNVLINGF--CKNKTVNEAI 318
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K + V ++L+ L G A +++++M ++G +P T+N+L++ C+ G
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGN 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + + G A+V T+ +LI G +++A LL+ ++E G P + Y
Sbjct: 454 LRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513
Query: 121 IIKGAFRRG 129
I + +G
Sbjct: 514 IKEEMMEKG 522
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V ++L+ G L+ AK ++ +M ++ PD T+++L++ +C+ G
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ +C G D+ TY L+ + K G +DEA +LL ++ E P LY
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNI 482
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F G+ + A FS++ G P YT +I + G EA +M + G
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542
Query: 181 LTPISRCFDLVTDGL 195
P S ++++ G
Sbjct: 543 FLPNSCSYNVIIQGF 557
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++ G + G+L A + N+M+ + P+ TF L++ +CK G
Sbjct: 258 MVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGM 317
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ K G+ + TY L+ +DEA ++L +V+ G P Y
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNI 377
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +R + D+A E+ K P+ Y+TL+ + GR EA N EM G
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + DGL G D A K+
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKL 464
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G V ++L+ L ++ A ++ KM K G PD TFN+LI C GE++
Sbjct: 122 GVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEA 181
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V ++ + + G DV +Y +I + K+G A +LL + E G P Y II
Sbjct: 182 VGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS 241
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +DA SE+ +G PP+ Y+T++ G EA EM + P
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301
Query: 185 SRCFDLVTDGL 195
+ F ++ DGL
Sbjct: 302 TVTFTILVDGL 312
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 101/208 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G G ++ A + N+M+++G PD+ +++++I +CKSG
Sbjct: 157 GIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMA 216
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G ++ Y +I ++ K ++++A LL +V+ G P Y+ I+ G
Sbjct: 217 LQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHG 276
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G ++A F+E+ + PN +T L+ + G EA MT+ G P
Sbjct: 277 FCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPN 336
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ ++ + DG + D A+K+ + V
Sbjct: 337 AYTYNALMDGYCLNNQMDEAQKVLDIMV 364
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ GL +G A Q++ KM ++G P+L + ++I+++CK
Sbjct: 188 MVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTL 247
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + G DV TY ++ G ++EA L + +V P +
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G +A C F + KG PN Y L+ + EA L M + G
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P+ ++++ +G C + L E
Sbjct: 368 CAPVVHSYNILINGY--CKRRRLDE 390
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P +LV GL G + A+ + M K+G++P+ T+N+L++ C + +
Sbjct: 293 MVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ 352
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G V +Y ILI K +DEA LL + E P Y+
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + G+ +A F E+ G P+ Y+TL+ + G EA L M E
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++++ +G+ GK ++A+++
Sbjct: 473 IEPDIVLYNILIEGMFIAGKLEVAKEL 499
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ N+M G ++ + N LI +C+ V F + + + KLG D T+ LI
Sbjct: 114 LCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRC 173
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G I EA L + +V GH P Y+ +I G + G A +++ KG PN
Sbjct: 174 IEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLV 233
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
YTT+I + +A + L EM + G+ P + + G + G
Sbjct: 234 AYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLG 281
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ GL G+L+ A +++ M + +PD+ +N LIE + +G+
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + TY I+I + K G+ DEA+ L + +DG P Y
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNV 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
II+G + A E+ K + + L+ + R
Sbjct: 553 IIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
N+ ++ A +M++ P + F + +I K + V + + G +V
Sbjct: 69 NSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVY 128
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ILI + + + A +L + + G P + +I G G+ +A F+E+
Sbjct: 129 SLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM 188
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+GH P+ Y+T+I + G A L +M E G P + + D L
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSL 242
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 186 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTT 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + VYT LI+ R G V+A L EM +G
Sbjct: 306 LIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVG 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 366 LKPDARTYTMIINEF--CKKGDVWK 388
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 155
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDAN 215
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 216 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 276 --CKKGDLKQ 283
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 151 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 210
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 211 IDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 270
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 271 LIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQEN 330
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + GL G AEK+ E L V L+
Sbjct: 331 TRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLK 367
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 224 KGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 283
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ +Y +I
Sbjct: 284 AHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALIS 343
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 344 GLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 403
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 404 SVVTYNVLMNG 414
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K ID+A L ++ G P + +I G
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDG 239
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 299
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + DG G D A
Sbjct: 300 KITYTTLIDGCCKDGDLDTA 319
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 256 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGD 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 316 LDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTM 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 376 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ + D + +LI +C+ G
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGX 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 351 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 410
Query: 121 IIKG 124
++ G
Sbjct: 411 LMNG 414
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V LV GL A + A +++ M+ G +P+ +++L++ CK GE++ E
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQE 664
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + K G V TY LI + K G +D A ++L +++D NP Y ++ G
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ + A S ++ KG PN YT LI G+ G+ M+M G P
Sbjct: 725 KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAP 781
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 35/248 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D LV G G ++SA+++ +M K G P + T+ SLI+ + K G
Sbjct: 634 MLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR 693
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + K +V TY ++ + K G ++A LL + + G +P Y
Sbjct: 694 LDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTA 753
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG---------------- 164
+I G + G+ D F ++K KG PN Y LI C G
Sbjct: 754 LIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTH 813
Query: 165 -----------------RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
RF+ + L EM PI+ + ++ D G+ + A ++
Sbjct: 814 WPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALEL 873
Query: 208 --EQLEVS 213
E +EVS
Sbjct: 874 HKEMMEVS 881
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ L + L A + ++M+ P+ T+++LI+ +CK+GE
Sbjct: 513 MRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGE 572
Query: 61 VEFCVEMYYSVCKLGSCAD-------------------VSTYKILIPAVSKAGMIDEAFR 101
++ E+Y KL +D V TY L+ + KA + +A
Sbjct: 573 IQKACEVY---AKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHD 629
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
LL ++ G P +Y ++ G + G+ D A F + G+ P+ YT+LI
Sbjct: 630 LLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ GR A L +M + P + + DGL G+ + A
Sbjct: 690 KDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKA 732
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++ L A ++ A + +M K G +PD+ T+ LI++ CK+G
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGL 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G +V TY L+ A K+ + +A + H +V D P Y+
Sbjct: 503 IEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSA 562
Query: 121 IIKGAFRRGQFDDAFCFF-----------SEIKIKGH-----PPNRPVYTTLITMCGRGG 164
+I G + G+ A + S+ +G PN Y L+ +
Sbjct: 563 LIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQ 622
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +A + L M G P +D + DG G+ D A+++
Sbjct: 623 KVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEV 665
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V +L+ AG +E A+ ++M G P++ T+ +L+ KS +
Sbjct: 478 MKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN-------- 112
+ ++++ + + TY LI + KAG I +A + L+ N
Sbjct: 538 LYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFE 597
Query: 113 --------PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
P Y ++ G + + DA + G PN+ VY L+ + G
Sbjct: 598 GKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVG 657
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
A + MT+ G P + + D + G+ DLA K+
Sbjct: 658 EIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G E A Q+V +M+++G PD T+ +I +C++ V+ ++ + K+G D
Sbjct: 427 LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPD 486
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V TY ILI + KAG+I++A + G +P Y ++ + Q A F
Sbjct: 487 VYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH 546
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+ PN Y+ LI + G +A
Sbjct: 547 RMVGDACYPNAITYSALIDGLCKAGEIQKA 576
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 83/224 (37%), Gaps = 41/224 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L+ G L L K+++N M+ +G +P FNSL+ T C + +
Sbjct: 297 MRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAED 356
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAV------------------------------ 90
+ +++ + G Y I I ++
Sbjct: 357 YAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLN 416
Query: 91 -----------SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
G ++AF+++ ++ G P S Y +I + + D AF F
Sbjct: 417 KINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQ 476
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
E+K G P+ YT LI + G +A ++ EM G +P
Sbjct: 477 EMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSP 520
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%)
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+C G+ E ++ + + G D STY +I + +A +D+AF L + + G NP
Sbjct: 427 LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPD 486
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y +I + G + A +F E++ G PN YT L+ + + +A +
Sbjct: 487 VYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH 546
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGK 200
M P + + + DGL G+
Sbjct: 547 RMVGDACYPNAITYSALIDGLCKAGE 572
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 33/195 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
+ D G+ P + LVQ L +AG +E A ++ +M G D T S + +CK G
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGR 254
Query: 60 ---------------EVEFCVEMYYSVCKLG------------SC----ADVSTYKILIP 88
+ C +M + + C +V TY+ L+
Sbjct: 255 WGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLT 314
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
K + R+++ ++ +G NP PSL+ ++ + A+ F+ + G PP
Sbjct: 315 GFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPP 374
Query: 149 NRPVYTTLI-TMCGR 162
VY I ++CGR
Sbjct: 375 GYVVYNIFIGSICGR 389
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 5/151 (3%)
Query: 10 VRGR--DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
V GR ++LV+ G A + + ++ G P T+N+L++ + +G+VE +
Sbjct: 167 VLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRV 226
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G C D ST A+ K G +A LL + L +I G
Sbjct: 227 QKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE---REDFKLDTVLCTQMISGLME 283
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
F++A F ++ + PN Y TL+T
Sbjct: 284 ASLFNEAMSFLHRMRCNSYIPNVVTYRTLLT 314
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLET---FNSLIETICKSGEVEFCV 65
PV G +L+ AG LE+A ++ +M++ S ++ + SLI+ +C S +VE V
Sbjct: 852 PVYG--MLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAV 909
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
+Y + + G D+S + L+ + + +EA +L + + ++G N
Sbjct: 910 ALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVN 956
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST---YKILIP 88
++ +M + P + LI++ K+G +E +E++ + ++ S ++++ + LI
Sbjct: 838 LLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQ 897
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+ + ++EA L + G P S + ++KG R ++++A
Sbjct: 898 ALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEAL 944
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + LV+GL G + A Q++N+M ++G PD++T+N +I +CK G +
Sbjct: 354 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 413
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ G DV T+ LI K +D A +L+ + E G P Y ++
Sbjct: 414 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 473
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ ++ F E+ +KG PN Y LI R + EA+ +++M++ GL P
Sbjct: 474 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 533
Query: 184 ISRCFDLVTDGLKNCGKHDL 203
+ F+ + G C DL
Sbjct: 534 DAVSFNTLIYGF--CRNGDL 551
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ ++GL AG L A ++V+ M + + PD+ T+N+LI +CK + + +
Sbjct: 225 NIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 283
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY +I K M+ EA LL + V G P Y +I G G +
Sbjct: 284 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 343
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F+E + KG P+ VY +L+ G + A + EM E G P + +++V +
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403
Query: 194 GLKNCG 199
GL G
Sbjct: 404 GLCKMG 409
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G +P ++ ++++ GL G + A ++N I +G PD+ TFN+LI+ CK +
Sbjct: 386 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 445
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G D TY ++ + KAG ++E ++ G +P P Y
Sbjct: 446 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R + ++A ++ +G P+ + TLI R G A ++ E G
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + F+ + +AEKI
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKI 592
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + ++ G ++ A +++ + +G PD T+ SLI +C G+
Sbjct: 281 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E++ G D+ Y L+ + G+I A ++++ + E+G +P Y
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DA ++ +KG+ P+ + TLI + + A + M E G
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++ V +GL GK
Sbjct: 461 IAPDTITYNSVLNGLCKAGK 480
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P L+ GL G +E A ++ N+ +G PD+ +NSL++ +C G +
Sbjct: 319 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILH 378
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ TY I+I + K G I +A ++++ + G+ P + +I
Sbjct: 379 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 438
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G +R + D A + G P+ Y +++ + G+ E EM G P
Sbjct: 439 GYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 498
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++++ + K + A K+
Sbjct: 499 NPITYNILIENFCRSNKMEEASKV 522
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +P ++L++ + +E A +++ KM ++G PD +FN+LI C++G++E
Sbjct: 494 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 553
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G A T+ LI A S + A ++ ++ GH Y +I
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 613
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ + D A+ E+ KG P+ + +I R +A + M ++G+ P
Sbjct: 614 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
V D + N K ++A
Sbjct: 674 ------EVVDTILNADKKEIA 688
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL G+ A+Q+ ++M+ P+L FN ++ +CK G+V + V + G
Sbjct: 157 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 216
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF--PSL--YAPIIKGAFRRGQF 131
++ TY I I + +AG + EA RL+ DG + P + Y +I+G ++
Sbjct: 217 MSINLFTYNIWIRGLCEAGRLPEAVRLV-----DGMRAYAVPDVVTYNTLIRGLCKKSMP 271
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+A + + +G P+ Y T+I + EA L + G P + +
Sbjct: 272 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 331
Query: 192 TDGLKNCGKHDLAEKIE 208
+GL C + D+ +E
Sbjct: 332 INGL--CAEGDVERALE 346
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G +P + L+ G G LE A + K+ ++G +TFN+LI
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 585
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G AD TY++LI K +D A+ L +++ G P S +
Sbjct: 586 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 645
Query: 121 IIKG 124
+I
Sbjct: 646 VINS 649
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 82/218 (37%), Gaps = 32/218 (14%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ L++A Y + A ++ +M+ G PDL T + + C + + +
Sbjct: 83 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 142
Query: 68 YYSVCKLGSCA-------------------------------DVSTYKILIPAVSKAGMI 96
++ G+ A +++ + ++ A+ K G +
Sbjct: 143 LRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 202
Query: 97 DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
EA LL +++ G + Y I+G G+ +A ++ P+ Y TL
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTL 261
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
I + EA +YL M G P ++ + DG
Sbjct: 262 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDG 299
>gi|260780558|gb|ACX50825.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 176
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +K+G +++A RLLH +
Sbjct: 9 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 68
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+++G P ++ ++ G + G+ ++A +F + G N Y++LI G+ GR
Sbjct: 69 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 128
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EA EM+E G T S C++ + D GK D A
Sbjct: 129 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 166
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ TF+ ++ +CK+G
Sbjct: 33 MIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGR 92
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 93 VEEALD-YFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 151
Query: 120 PIIKGAFRRGQFDDAFCFFSEIK 142
+I + G+ D+A F ++
Sbjct: 152 ALIDAFTKHGKVDEAMTLFKRME 174
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L++ GL G L + MI++GS P++ + LI+ KSG VE
Sbjct: 1 KGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVED 60
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G DV T+ +++ + K G ++EA +G Y+ +I
Sbjct: 61 AIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLID 120
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 121 GLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 175
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 9 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 68
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ ++ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 69 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 128
Query: 202 DLAEKI 207
D AE++
Sbjct: 129 DEAERL 134
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
P ++ +I G + G+ ++ + F + KG PN +YT LI + G +A L
Sbjct: 7 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLH 66
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGK 200
M + G P F +V +GL G+
Sbjct: 67 RMIDEGFKPDVVTFSVVVNGLCKNGR 92
>gi|260780548|gb|ACX50820.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 183
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +K+G +++A RLLH +
Sbjct: 9 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 68
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+++G P ++ ++ G + G+ ++A +F + G N Y++LI G+ GR
Sbjct: 69 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 128
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EA EM+E G T S C++ + D GK D A
Sbjct: 129 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 166
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ TF+ ++ +CK+G
Sbjct: 33 MIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGR 92
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 93 VEEALD-YFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 151
Query: 120 PIIKGAFRRGQFDDAFCFFSEIK 142
+I + G+ D+A F ++
Sbjct: 152 ALIDAFTKHGKVDEAMTLFKRME 174
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L++ GL G L + MI++GS P++ + LI+ KSG VE
Sbjct: 1 KGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVED 60
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G DV T+ +++ + K G ++EA +G Y+ +I
Sbjct: 61 AIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLID 120
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
G + G+ D+A F E+ KG + Y LI + G+ EA M
Sbjct: 121 GLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 9 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 68
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ ++ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 69 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 128
Query: 202 DLAEKI 207
D AE++
Sbjct: 129 DEAERL 134
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
P ++ +I G + G+ ++ + F + KG PN +YT LI + G +A L
Sbjct: 7 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLH 66
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGK 200
M + G P F +V +GL G+
Sbjct: 67 RMIDEGFKPDVVTFSVVVNGLCKNGR 92
>gi|260780506|gb|ACX50799.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780508|gb|ACX50800.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780510|gb|ACX50801.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780512|gb|ACX50802.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780514|gb|ACX50803.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780516|gb|ACX50804.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780518|gb|ACX50805.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780520|gb|ACX50806.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780522|gb|ACX50807.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780524|gb|ACX50808.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780526|gb|ACX50809.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780528|gb|ACX50810.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780530|gb|ACX50811.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780532|gb|ACX50812.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780534|gb|ACX50813.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780536|gb|ACX50814.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780538|gb|ACX50815.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780540|gb|ACX50816.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780542|gb|ACX50817.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780544|gb|ACX50818.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780550|gb|ACX50821.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780552|gb|ACX50822.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780554|gb|ACX50823.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780556|gb|ACX50824.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780560|gb|ACX50826.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780562|gb|ACX50827.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780564|gb|ACX50828.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780566|gb|ACX50829.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780568|gb|ACX50830.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780570|gb|ACX50831.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780572|gb|ACX50832.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780574|gb|ACX50833.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780576|gb|ACX50834.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780578|gb|ACX50835.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780580|gb|ACX50836.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780582|gb|ACX50837.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780584|gb|ACX50838.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780586|gb|ACX50839.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780588|gb|ACX50840.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780590|gb|ACX50841.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780592|gb|ACX50842.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780594|gb|ACX50843.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780596|gb|ACX50844.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780598|gb|ACX50845.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780600|gb|ACX50846.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780602|gb|ACX50847.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780604|gb|ACX50848.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780606|gb|ACX50849.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780608|gb|ACX50850.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780610|gb|ACX50851.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780612|gb|ACX50852.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780614|gb|ACX50853.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780616|gb|ACX50854.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780618|gb|ACX50855.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780620|gb|ACX50856.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780622|gb|ACX50857.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780624|gb|ACX50858.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 183
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +K+G +++A RLLH +
Sbjct: 9 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 68
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+++G P ++ ++ G + G+ ++A +F + G N Y++LI G+ GR
Sbjct: 69 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 128
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EA EM+E G T S C++ + D GK D A
Sbjct: 129 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 166
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ TF+ ++ +CK+G
Sbjct: 33 MIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGR 92
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 93 VEEALD-YFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 151
Query: 120 PIIKGAFRRGQFDDAFCFFSEIK 142
+I + G+ D+A F ++
Sbjct: 152 ALIDAFTKHGKVDEAMTLFKRME 174
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L++ GL G L + MI++GS P++ + LI+ KSG VE
Sbjct: 1 KGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVED 60
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G DV T+ +++ + K G ++EA +G Y+ +I
Sbjct: 61 AIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLID 120
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 121 GLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 175
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 9 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 68
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ ++ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 69 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 128
Query: 202 DLAEKI 207
D AE++
Sbjct: 129 DEAERL 134
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
P ++ +I G + G+ ++ + F + KG PN +YT LI + G +A L
Sbjct: 7 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLH 66
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
M + G P F +V +GL G+ + A
Sbjct: 67 RMIDEGFKPDVVTFSVVVNGLCKNGRVEEA 96
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ LE A ++ N M+ PDL T+N++I + G
Sbjct: 289 GIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREA 348
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G D TY L+ A ++ G +D+ + ++V+ G Y II
Sbjct: 349 GRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHM 408
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+RGQ D AF +S++K+ G P+ YT LI G+ EAA + EM + P
Sbjct: 409 YGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPT 468
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
R F + G GK AE E + LRS
Sbjct: 469 LRTFSALICGYAKAGKRVEAE--ETFDCMLRS 498
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV--EFCVEMYYSVCKLGSCADVS 81
G +++++ M +G +PDL +FN+LI KSG + +E+ V + G D+
Sbjct: 236 GRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDII 295
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY LI A S+ ++EA ++ +++V P Y +I R G +A F ++
Sbjct: 296 TYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDL 355
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ KG P+ Y +L+ R G + +M +MG ++ + G+H
Sbjct: 356 ESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQH 415
Query: 202 DLA 204
DLA
Sbjct: 416 DLA 418
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KGF P + L+ G ++ K++ M+K G D T+N++I K G+
Sbjct: 355 LESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQ 414
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + G D TY +LI ++ KA MI EA ++ ++ P ++
Sbjct: 415 HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSA 474
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + G P+ Y+ ++ + R +A EM
Sbjct: 475 LICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHS 534
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++++ L+ GK + E + ++
Sbjct: 535 FKPDHALYEVM---LRVLGKENREEDVHKV 561
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 81/207 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + +++ L + + MV++M PDL +NS+++ G+
Sbjct: 878 MKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGD 937
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + + G D TY LI + +E L+H + G P Y
Sbjct: 938 FKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKS 997
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + A F + K +R Y ++ M G +A L M E G
Sbjct: 998 LISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAG 1057
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P L+ G+ + AEK+
Sbjct: 1058 VEPTIATMHLLMVSYSGSGQPEEAEKV 1084
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 38/230 (16%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ +G E A+ + N M++ G P +++ N L++ + G ++ + + +G
Sbjct: 788 LIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMG 847
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII----KGAFRR--- 128
S+ +++ A + AG I E ++ + G+ P LY +I KG R
Sbjct: 848 FKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVE 907
Query: 129 ----------------------------GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
G F + I+ G P+ Y TLI M
Sbjct: 908 AMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMY 967
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
R R E + + EM +GL P D + GK + E+ E+L
Sbjct: 968 CRDRRPEEGLSLMHEMRRVGLEP---KLDTYKSLISAFGKLQMVEQAEEL 1014
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P + + +++ G + Q+ + + G PD +T+N+LI C+ E +
Sbjct: 918 FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGL 977
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + ++G + TYK LI A K M+++A L L+ S Y ++K
Sbjct: 978 SLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMF 1037
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G A +K G P L+ G+ EA L + GL +
Sbjct: 1038 RNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLST 1097
Query: 186 RCFDLVTDGLKNCGKHDLA 204
+ V D G H++A
Sbjct: 1098 LPYSSVIDAYLKNGDHNVA 1116
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + +V GL A L+SA +V +M G PD T+ +LI+ CK E
Sbjct: 371 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ ++ G D TY LI +SKAG +A R+L ++E G P + Y
Sbjct: 431 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R+G E++ KG P Y ++ + G+ A L M +G
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++P ++++ DG +C KH IE+L+
Sbjct: 551 VSPDDITYNILLDG--HC-KHGKVTDIEELK 578
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P V L+QGL G +E A+ + KM +G P+ F LI+ CK G+
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E++ + + G D TY ++ + +A + A ++ + G P Y
Sbjct: 361 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A + +G + YT LI+ + GR +A L EM E G
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + + +V D C K D+ + L+
Sbjct: 481 LEPDNTTYTMVIDAF--CRKGDVKTGLRLLK 509
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 100/207 (48%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P + ++L++ L+ G L SA+ + ++M +G + +FN++I +C++G+++
Sbjct: 233 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 292
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + + G DV TY LI + + G I++A + + G P ++ +I
Sbjct: 293 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 352
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
++G + E++ +G P+ Y ++ R A+ ++EM GL
Sbjct: 353 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 412
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + + DG + D+A +I+Q
Sbjct: 413 PDTVTYTTLIDGYCKEEELDMAMEIKQ 439
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+++ G P+ + FN L+ + + GE+ ++ + G V ++ +I + +AG
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D A L + E G P Y +I+G R G+ +DA F ++ +G PN V+T
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
LI + G EM E G+ P + ++ + +GL C DL + + V +
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL--CRARDL-KSASGIVVEM 406
Query: 215 RS 216
RS
Sbjct: 407 RS 408
>gi|260780546|gb|ACX50819.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 182
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +K+G +++A RLLH +
Sbjct: 8 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 67
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+++G P ++ ++ G + G+ ++A +F + G N Y++LI G+ GR
Sbjct: 68 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 127
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EA EM+E G T S C++ + D GK D A
Sbjct: 128 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 165
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ TF+ ++ +CK+G
Sbjct: 32 MIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGR 91
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 92 VEEALD-YFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 150
Query: 120 PIIKGAFRRGQFDDAFCFFSEIK 142
+I + G+ D+A F ++
Sbjct: 151 ALIDAFTKHGKVDEAMTLFKRME 173
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L++ GL G L + MI++GS P++ + LI+ KSG VE
Sbjct: 1 GIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDA 60
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G DV T+ +++ + K G ++EA +G Y+ +I G
Sbjct: 61 IRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDG 120
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 121 LGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 174
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 8 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 67
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ ++ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 68 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 127
Query: 202 DLAEKI 207
D AE++
Sbjct: 128 DEAERL 133
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
P ++ +I G + G+ ++ + F + KG PN +YT LI + G +A L
Sbjct: 6 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLH 65
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGK 200
M + G P F +V +GL G+
Sbjct: 66 RMIDEGFKPDVVTFSVVVNGLCKNGR 91
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V ++L++GL G +E A + + K+G P+ T+ LI +CK+G + ++++
Sbjct: 361 VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFK 420
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
D Y ++ + K G +DEA +++ + + G+ P + P+I G R
Sbjct: 421 EAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRAS 480
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ +DA FF E++ KG P Y TLI + RF EA +++ EM E P
Sbjct: 481 KLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCS 540
Query: 190 LVTDGLKNCGKHDLAEKIEQ 209
L+ DGL K ++A + Q
Sbjct: 541 LLMDGLCQEKKIEMALNLWQ 560
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ GL G + + ++ +M K + D+ T++SLI +C++G ++ V +
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRV 314
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
Y + + D T+ ++ +AG I E+F L + ++ S Y +IKG F
Sbjct: 315 YKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVS-YNILIKGLFE 373
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ ++A + + KG P Y LI + GR +A E + +
Sbjct: 374 NGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYA 433
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + DGL G+ D A I
Sbjct: 434 YSSMVDGLCKEGRMDEAISI 453
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 86/197 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + + L++GL A A V +M+++ PD+ T + L++ +C+ +
Sbjct: 492 MECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKK 551
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ G D++ Y IL+ + +++A +L ++ P
Sbjct: 552 IEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNT 611
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G ++ ++ A + I G P+ Y I R +A +L + G
Sbjct: 612 LMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRG 671
Query: 181 LTPISRCFDLVTDGLKN 197
+ P + ++++ N
Sbjct: 672 ILPTAVTWNILVRAAVN 688
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 90/196 (45%), Gaps = 3/196 (1%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P ++ ++L++ +E A +++ M Q PD+ ++ +LI + K G++ ++
Sbjct: 148 SPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALK 207
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKG 124
++ + G ADV+ Y +LI K G D+ + LV+D + +P++ Y +I G
Sbjct: 208 VFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDC-SVYPNVVTYNIMING 266
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+FD++ + + + Y++LI G A E+ E L
Sbjct: 267 LCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVD 326
Query: 185 SRCFDLVTDGLKNCGK 200
+ + + +G GK
Sbjct: 327 AVTHNAMLNGFCRAGK 342
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 10/218 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M +G+ + L+ G + A LE A +M +G P + ++N+LI+ +CK
Sbjct: 457 MDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAER 516
Query: 58 -SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
S F EM K D+ T +L+ + + I+ A L ++ G P +
Sbjct: 517 FSEAYSFVKEMLEKEWK----PDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDIT 572
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+Y ++ G + +DA +S +K PN TL+ + + +A+ +
Sbjct: 573 MYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCI 632
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ GL P +++ GL +C + +++ IE L +L
Sbjct: 633 LKDGLHPDIISYNITIKGLCSCSR--ISDAIEFLNDAL 668
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 3/213 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P VR + L+ + + A+ P+L+T+N LI+ CK ++E
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + DV +Y LI + K G + A ++ + G + Y +I G
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDG 230
Query: 125 AFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F+ G +D + +K PN Y +I + GRF E+ MT+
Sbjct: 231 FFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREK 290
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
+ + GL G D A ++ E +E SL
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL G ++ A +VN+M K+G D N LI ++ ++E + + + G
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ +Y LI + KA EA+ + ++E P + ++ G + + + A
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556
Query: 136 CFFSEIKIKGHPPNRPVYTTLI 157
+ + KG P+ +Y L+
Sbjct: 557 NLWQQALDKGFKPDITMYNILM 578
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ GL + G L+ A + +KM G P++ T+N+LI CK
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ EM + K G +V T+ LI A KAG +D+AF L +++ G P S Y
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G +A E++ G + Y L+ + G +A L EM E+G
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L P ++ + DG G A + L
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTL 534
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ AG ++ A + + M+ G P++ T+N LI C+ G V+
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G AD+ TY IL+ A+ K G +A RLL + E G NP Y +I
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G FR G A + ++ KG N Y LI G+ EA L EM E GL P
Sbjct: 518 GYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 577
Query: 184 ISRCFDLVTD 193
+D++ D
Sbjct: 578 NRTTYDILRD 587
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P ++L+ G + +AK++ +M +QG P++ T+NSLI +C +G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + +G +V TY LI K M+ EA +L ++ + G P +
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DDAF S + G PN Y LI R G EA EM G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
L ++++ D L G+ A ++ E EV L
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGL 505
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+P V + ++ G AG + A ++ +M+ + P+ TFN LI+ C+
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + G +V TY LI + G +DEA L + G P Y
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ +A +I +G PN + TLI G+ GR +A M + G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P ++ + G G A K+ +
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF + ++ L+ G + + + +MI++ ++ TF+ +I +CK G+ +
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + G V TY +I KAG + +A LL +V +P + +I
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R A F E++ +G PN Y +LI G+ EA +M+ MGL
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P ++ + +G C K L E E L+
Sbjct: 367 PNVVTYNALINGF--CKKKMLKEAREMLD 393
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D+LV + G ++ A + ++ G + N ++ ++ K G + +Y + +
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+V T+ ++I + K G +A ++ ++ G +P Y II G + G+
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+ K PN + LI R A EM GL P ++ + +
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342
Query: 194 GLKNCGKHDLA 204
GL + GK D A
Sbjct: 343 GLCSNGKLDEA 353
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G NP + L+ G G +A + M K+G ++ T+N LI+ C G+
Sbjct: 500 MFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGK 559
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+E + + + G + +TY IL + + G I + L+N+
Sbjct: 560 LEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNV 605
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V + L GL + AK +++ MI++G P+ T+ +LI CK G+
Sbjct: 333 MEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGD 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G+ V TY +++ K G I EA R + + G P YA
Sbjct: 393 MVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYAS 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D A F E+K +G PN YT LI+ + GR EA +M + G
Sbjct: 453 LVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAG 512
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
LTP + + L + D+ K Q++VS
Sbjct: 513 LTPDDSLYSALVGSLHTDNRKDIHHK--QIKVS 543
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P R +L+ G G +E+A+ ++ M +G + FN++I+ C+ G V+
Sbjct: 267 GIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNA 326
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ ++ K+G DV TY L + + + EA LLH ++E G P Y +I
Sbjct: 327 LKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISI 386
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G +A F E+ KG P+ Y ++ + G EA + EM + GL P
Sbjct: 387 HCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPD 446
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + G GK D+A K+
Sbjct: 447 VYTYASLVHGHCVNGKVDVALKL 469
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 95/244 (38%), Gaps = 35/244 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G V +LV L AG + + +V++M + D+ + ++I C++G
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ G + TY +LI K G ++ A LL ++ G ++
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312
Query: 121 IIKGAFRRGQFDDAFCF----------------------------FSEIKI-------KG 145
+I G R+G D+A +E K KG
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PPN YTTLI++ + G VEA EM G P ++++ DG G AE
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAE 432
Query: 206 KIEQ 209
+ +
Sbjct: 433 RFRK 436
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++V G +G ++ A+ ++++M + G + +NSL++ + + E+ +
Sbjct: 137 VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENG 196
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G A V TY IL+ ++S AG I + ++ + LY +I R G A
Sbjct: 197 GIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRA 256
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E G PN Y LI + G+ A L +M G+ F+ + DG
Sbjct: 257 SEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDG 316
Query: 195 LKNCGKHDLAEKIE 208
G D A K++
Sbjct: 317 YCRQGMVDNALKVK 330
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + LV+GL G + A Q++N+M ++G PD++T+N +I +CK G +
Sbjct: 357 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 416
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ G DV T+ LI K +D A +L+ + E G P Y ++
Sbjct: 417 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 476
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ ++ F E+ +KG PN Y LI R + EA+ +++M++ GL P
Sbjct: 477 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 536
Query: 184 ISRCFDLVTDGLKNCGKHDL 203
+ F+ + G C DL
Sbjct: 537 DAVSFNTLIYGF--CRNGDL 554
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ ++GL AG L A ++V+ M + + PD+ T+N+LI +CK + + +
Sbjct: 228 NIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 286
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY +I K M+ EA LL + V G P Y +I G G +
Sbjct: 287 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 346
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F+E + KG P+ VY +L+ G + A + EM E G P + +++V +
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406
Query: 194 GLKNCG 199
GL G
Sbjct: 407 GLCKMG 412
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G +P ++ ++++ GL G + A ++N I +G PD+ TFN+LI+ CK +
Sbjct: 389 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 448
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G D TY ++ + KAG ++E ++ G +P P Y
Sbjct: 449 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R + ++A ++ +G P+ + TLI R G A ++ E G
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + F+ + +AEKI
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKI 595
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + ++ G ++ A +++ + +G PD T+ SLI +C G+
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E++ G D+ Y L+ + G+I A ++++ + E+G +P Y
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DA ++ +KG+ P+ + TLI + + A + M E G
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++ V +GL GK
Sbjct: 464 IAPDTITYNSVLNGLCKAGK 483
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P L+ GL G +E A ++ N+ +G PD+ +NSL++ +C G +
Sbjct: 322 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILH 381
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ TY I+I + K G I +A ++++ + G+ P + +I
Sbjct: 382 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 441
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G +R + D A + G P+ Y +++ + G+ E EM G P
Sbjct: 442 GYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 501
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++++ + K + A K+
Sbjct: 502 NPITYNILIENFCRSNKMEEASKV 525
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +P ++L++ + +E A +++ KM ++G PD +FN+LI C++G++E
Sbjct: 497 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 556
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G A T+ LI A S + A ++ ++ GH Y +I
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 616
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ + D A+ E+ KG P+ + +I R +A + M ++G+ P
Sbjct: 617 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
V D + N K ++A
Sbjct: 677 ------EVVDTILNADKKEIA 691
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL G+ A+Q+ ++M+ P+L FN ++ +CK G+V + V + G
Sbjct: 160 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 219
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF--PSL--YAPIIKGAFRRGQF 131
++ TY I I + +AG + EA RL+ DG + P + Y +I+G ++
Sbjct: 220 MSINLFTYNIWIRGLCEAGRLPEAVRLV-----DGMRAYAVPDVVTYNTLIRGLCKKSMP 274
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+A + + +G P+ Y T+I + EA L + G P + +
Sbjct: 275 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 334
Query: 192 TDGLKNCGKHDLAEKIE 208
+GL C + D+ +E
Sbjct: 335 INGL--CAEGDVERALE 349
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G +P + L+ G G LE A + K+ ++G +TFN+LI
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 588
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G AD TY++LI K +D A+ L +++ G P S +
Sbjct: 589 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 648
Query: 121 II 122
+I
Sbjct: 649 VI 650
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 82/218 (37%), Gaps = 32/218 (14%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ L++A Y + A ++ +M+ G PDL T + + C + + +
Sbjct: 86 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 145
Query: 68 YYSVCKLGSCA-------------------------------DVSTYKILIPAVSKAGMI 96
++ G+ A +++ + ++ A+ K G +
Sbjct: 146 LRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 205
Query: 97 DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
EA LL +++ G + Y I+G G+ +A ++ P+ Y TL
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTL 264
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
I + EA +YL M G P ++ + DG
Sbjct: 265 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDG 302
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/113 (20%), Positives = 54/113 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG++ + L+ + A+++ ++M+ +G D T+ LI+ CK+
Sbjct: 564 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 623
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V+ + K G +ST+ +I +++ + +A ++H +V+ G P
Sbjct: 624 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 335 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 394
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +DEA RL + E G Y
Sbjct: 395 VEEALD-YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 453
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMT 177
+I + + D+A F ++ + ++ VYT I + G + R EA M
Sbjct: 454 ALIDAFTKHRKVDEAIALFKRME-EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI 512
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ G+TP + CF ++ GL GK A KI
Sbjct: 513 DKGITPTAACFRALSTGLCLSGKVARACKI 542
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++Q S + +M ++G F+ +I +CK G++ ++ ++ + G
Sbjct: 280 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 339
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A
Sbjct: 340 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 399
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+F + G N Y++LI G+ GR EA EM+E G T S C++ + D
Sbjct: 400 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 459
Query: 196 KNCGKHDLA 204
K D A
Sbjct: 460 TKHRKVDEA 468
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ GL++A +++SA+++ M PD+ T+N++I+ CK+G+
Sbjct: 195 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 254
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + G AD TY +I A L + E G P ++
Sbjct: 255 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 314
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++ + F + KG PN +YT LI + G +A L M + G
Sbjct: 315 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 374
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + +V +GL G+
Sbjct: 375 FKPDVVTYSVVVNGLCKNGR 394
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+GF P V ++V GL G +E A + G + ++SLI+ + K+G
Sbjct: 370 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 429
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYA 119
V+ ++ + + G D Y LI A +K +DEA L + E+G + Y
Sbjct: 430 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 489
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G F+ + ++A + + KG P + L T G+ A L E+ M
Sbjct: 490 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 549
Query: 180 GLTPISRCFDLVT 192
G+ + C D++
Sbjct: 550 GVILDAACEDMIN 562
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
N+LI++ K G VE + ++ + + G + TY L+ + A +D A R+ +
Sbjct: 173 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 232
Query: 109 DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
P Y +IKG + GQ A +++ +GH ++ Y T+I C F
Sbjct: 233 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 292
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EM E G+ F LV GL GK
Sbjct: 293 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 324
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L GL +G + A ++++++ G D +I T+CK+G
Sbjct: 511 MIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGR 569
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ ++ + + G ++I A+ K G D A +L+H+ + G+ S+
Sbjct: 570 IKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSV 626
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ GL G + A+++V++M G PD T+ +LI+ CK G++E
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESA 417
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + + G D + LI + G + +A R L +VE G P + Y +I G
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME-MTEMGLT 182
++G F E++I GH P Y L+ +C +G ++ AN L+E M +G+T
Sbjct: 478 YCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ--MKNANMLLEAMLNLGVT 535
Query: 183 PISRCFDLVTDG-LKNCGKHDL 203
P ++++ +G KN DL
Sbjct: 536 PDDITYNILLEGHCKNGKAEDL 557
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +L+ GL G L+ A+Q+ ++M ++G P+ TF +LI+ C+S
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRR 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + Y+ + +G D+ Y L+ + K G +++A +L+ + G P Y
Sbjct: 344 IDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTT 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A + +G + +T LI+ R GR +A L EM E G
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463
Query: 181 LTPISRCFDLVTDG 194
+ P + +V DG
Sbjct: 464 MKPDDATYTMVIDG 477
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ F P G L+ ++N+ + +++++ G P ++ +N LI CK G +
Sbjct: 181 NSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIR 240
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + K G ++ LI + K+ +DE FRL + E+ P Y+ +I
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ D A F E++ +G PN +T LI R R A N +M MG+
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + +GL G + A K+
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKL 385
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G + A++ + +M++ G PD T+ +I+ CK G V+ ++ + G
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY +L+ + K G + A LL ++ G P Y +++G + G+ +D
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT 158
+E KG + YT+L++
Sbjct: 559 KLRNE---KGLIVDYAYYTSLVS 578
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +++ G G ++ +++ +M G P + T+N L+ +CK G+
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
++ + ++ LG D TY IL+ K G ++ +L
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V ++L++G G L+ A + + K+ G PD+ + N ++ ++C G
Sbjct: 242 MRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGR 301
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ ++ + G V T+ ILI + + G++ +A +L + + GH P + P
Sbjct: 302 WMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNP 361
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G D A + + +G P+ Y L+T + G+ +A L +++ G
Sbjct: 362 LIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG 421
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+P ++ V DGL GK +LA +E LE
Sbjct: 422 CSPSLISYNTVIDGLLKVGKAELA--VELLE 450
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P D ++ L + G L+ A Q++ + ++ PD+ T LI+ CK V
Sbjct: 176 GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQA 235
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + G DV TY +LI K G +DEA R L L G P + I++
Sbjct: 236 MKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRS 295
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G++ DA + + KG P+ + LI + G +A N L M + G TP
Sbjct: 296 LCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 355
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
SR F+ + G C + IE LE+
Sbjct: 356 SRSFNPLIQGF--CNGKGIDRAIEYLEI 381
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ L G L A ++ M K G P+ +FN LI+ C
Sbjct: 312 MLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKG 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + G D+ TY IL+ A+ K G +D+A +L L G +P Y
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A E+ KG P+ T+++ R G+ EA + +
Sbjct: 432 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA 491
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ + GL + LA
Sbjct: 492 IRPNAFIYNSIITGLCKSQQTSLA 515
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + L+QG N ++ A + + M+ +G PD+ T+N L+ +CK G+
Sbjct: 347 MPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGK 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G + +Y +I + K G + A LL + G P
Sbjct: 407 VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTS 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ +A FF +K PN +Y ++IT + + A ++L +M G
Sbjct: 467 VVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKG 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + + G+ G LAE +L L S
Sbjct: 527 CKPTEATYTTLIKGITYEG---LAEDASKLSNELYS 559
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++L+ L G ++ A +++++ +G P L ++N++I+ + K G+
Sbjct: 382 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 441
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E VE+ +C G D+ T ++ +S+ G + EA + H L P +Y
Sbjct: 442 AELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNS 501
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + Q A F +++ KG P YTTLI G +A+ E+ G
Sbjct: 502 IITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561
Query: 181 LTPIS 185
L S
Sbjct: 562 LVKRS 566
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G V ++L+ G +G +E A +++++M G P+ T+++++ ++C G+
Sbjct: 140 LEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGK 196
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + DV T +LI A K + +A +L + + G P Y
Sbjct: 197 LKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNV 256
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G+ D+A F ++ G P+ + ++ GGR+++A L M G
Sbjct: 257 LIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P F+++ + L C K L + + LE+
Sbjct: 317 CLPSVVTFNILINFL--CQKGLLGKALNVLEM 346
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +++++ L + G A +++ M+++G P + TFN LI +C+ G +
Sbjct: 281 GCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKA 340
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + K G + ++ LI ID A L +V G P Y ++
Sbjct: 341 LNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTA 400
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ DDA S++ KG P+ Y T+I + G+ A L EM GL P
Sbjct: 401 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP- 459
Query: 185 SRCFDLVT 192
DL+T
Sbjct: 460 ----DLIT 463
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 38/199 (19%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L+ G LE + + M +G PD+ +LI CK G + ++ + + G+ D
Sbjct: 89 LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD------- 132
V++Y +LI K+G I+EA R+L + G +P + Y ++ RG+
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205
Query: 133 ------------------DAFC----------FFSEIKIKGHPPNRPVYTTLITMCGRGG 164
DA C F+E++ KG P+ Y LI +GG
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265
Query: 165 RFVEAANYLMEMTEMGLTP 183
R EA +L ++ G P
Sbjct: 266 RLDEAIRFLKKLPSYGCQP 284
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ GL G + A+++V++M G PD T+ +LI+ CK G++E
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESA 417
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + + G D + LI + G + +A R L +VE G P + Y +I G
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME-MTEMGLT 182
++G F E++I GH P Y L+ +C +G ++ AN L+E M +G+T
Sbjct: 478 YCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ--MKNANMLLEAMLNLGVT 535
Query: 183 PISRCFDLVTDG-LKNCGKHDL 203
P ++++ +G KN DL
Sbjct: 536 PDDITYNILLEGHCKNGKAEDL 557
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ F P G L+ ++N+ + +++++ G P ++ +N LI CK G +
Sbjct: 181 NSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIR 240
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + K G ++ LI + K+ +DE FRL + E+ P Y+ +I
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ D A F E++ +G PN +T LI R R A N +M MG+
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + +GL G + A K+
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKL 385
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 70/260 (26%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V+ ++L+ G + AK + N++ K+G P +FN+LI +CKS ++
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + DV TY +LI + K G +D A +L + + G P + +I G
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337
Query: 125 AFRRGQFDDAFCFF-----------------------------------SEIKIKGHPPN 149
+R + D A + E+K+ G P+
Sbjct: 338 QYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPD 397
Query: 150 RPVYTTLIT-MCGRG----------------------------------GRFVEAANYLM 174
+ YTTLI C G GR +A L
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457
Query: 175 EMTEMGLTPISRCFDLVTDG 194
EM E G+ P + +V DG
Sbjct: 458 EMVEAGMKPDDATYTMVIDG 477
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G + A++ + +M++ G PD T+ +I+ CK G V+ ++ + G
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY +L+ + K G + A LL ++ G P Y +++G + G+ +D
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT 158
+E KG + YT+L++
Sbjct: 559 KLRNE---KGLIVDYAYYTSLVS 578
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +++ G G ++ +++ +M G P + T+N L+ +CK G+
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
++ + ++ LG D TY IL+ K G ++ +L
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G +LVQG +G LE A+++ +M+ G PD+ T+ L++ +C +G+
Sbjct: 371 ISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGK 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ + K D+ Y I+I + K G +++A+ L +L G P Y
Sbjct: 431 LEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A +++ G+ PN Y TLI R G +A + EM G
Sbjct: 491 MISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 550
Query: 181 LTPISRCFDLVTDGLKN 197
+ + +V D L +
Sbjct: 551 FSADASSIKMVIDMLSS 567
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L+ GL + A +V +M++ G P++ T+NS++ ICKSG+
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + ADV TY +I ++ + G ID A L + G Y ++ G
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGG 249
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+++D ++ + PN + LI + + G+ EA EM G++P
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ ++ + DG C ++ L+E L++ +R+
Sbjct: 310 TITYNSLMDGY--CMQNRLSEANNMLDLMVRN 339
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G ++ ++ K+ K+G + T++ L++ C+SG++E E++ + LG
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY IL+ + G +++A + +L + N +Y II+G + G+ +DA+
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F + KG PN YT +I+ + G EA L +M E G P
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEP 518
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + + LV GL AG Q++ M + P++ TFN LI+ K G+
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + G + TY L+ + EA +L +V + +P +
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + D+ F +I +G N Y+ L+ + G+ A EM +G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
+ P + ++ DGL + GK + A +I E L+ S
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 444
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ K++K G +PD TFN+LI +C +V V + + + G +V TY ++
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ K+G A LL + E Y+ II R G D A F E++ KG
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y +L+ + G++ + L +MT + P F+++ D GK A ++
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANEL 297
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + +V G+ +G A ++ KM ++ D+ T++++I+++C+ G
Sbjct: 161 MVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGC 220
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + + TY L+ + KAG ++ +LL ++ P +
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A + E+ KG PN Y +L+ R EA N L M
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340
Query: 181 LTPISRCFDLVT 192
+P D+VT
Sbjct: 341 CSP-----DIVT 347
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ V ++ L G +++A + +M +G L T+NSL+ +CK+G+
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V++ + +V T+ +LI K G + EA L ++ G +P Y
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNS 315
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + +A + P+ +T+LI + R E ++++ G
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG 375
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
L + + ++ G GK ++AE++ Q VSL
Sbjct: 376 LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSL 409
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
KM G ++ T N +I C+ + F + V KLG D +T+ LI +
Sbjct: 90 KMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLES 149
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+ EA L+ +VE+G P Y I+ G + G A ++ + + Y+
Sbjct: 150 KVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYS 209
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
T+I R G A + EM G+ ++ + GL GK +
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWN 257
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + GF P + + L+ G AG + A ++ +M ++ +P++ +F +LI+ +C +
Sbjct: 145 IREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKK 204
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +++ + G AD TY LI K G I + + LL N+++ GH P P Y
Sbjct: 205 MEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLH 264
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + ++ E++ G P+ +Y +I + + G E EM G
Sbjct: 265 IMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATG 324
Query: 181 LTPISRCFDLVTDGL 195
L+P F ++ G
Sbjct: 325 LSPGLDTFVIMIHGF 339
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 37/231 (16%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G + ++++ MI+QG P+ T+ ++ K E+E C+E+ + K+G
Sbjct: 230 LISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIG 289
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D++ Y I+I K G I E R+ + + G +P + +I G + +A
Sbjct: 290 CTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEAC 349
Query: 136 CFFSE-------------------------------------IKIKGHPPNRPVYTTLIT 158
FF E I KG N +T I
Sbjct: 350 EFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIH 409
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G EA +Y ++M + G+ P F + GL+ +A +I +
Sbjct: 410 ALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITE 460
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+Q L +E A ++ +M G D T+ +LI CK G+
Sbjct: 180 MRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK 239
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ ++ + G + TY ++ A K ++E L+ + + G P ++Y
Sbjct: 240 ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 299
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ A + G+ + ++E++ G P + +I VEA + EM G
Sbjct: 300 VIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRG 359
Query: 181 L 181
L
Sbjct: 360 L 360
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 1/154 (0%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F L++ +CK+G V+ ++ + ++ + + L+ + G + EA +L +
Sbjct: 87 VFGCLLDALCKNGSVKEAASLFEDM-RIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQI 145
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
E G P +Y ++ G G+ DA+ E++ K PN +TTLI +
Sbjct: 146 REAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKM 205
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EA EM G + + + G GK
Sbjct: 206 EEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK 239
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ L G + A ++ M+ +G D T+N LI+ +CK+G
Sbjct: 474 MLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGN 533
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D TY LI A + G++ EA + +++ DG P Y
Sbjct: 534 LNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I RRG A+ +F ++ +G PN Y LI R GR A + EM E G
Sbjct: 594 FIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG 653
Query: 181 LTPISRCFDLVTDGLKNC 198
L P + L+ DG NC
Sbjct: 654 LVPNKYTYTLLIDG--NC 669
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + ++ GLL +G +E+A+ +M G PD+ T+NSL+ CK+G
Sbjct: 334 MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G V TY ILI + G ++EA RL +VE G P Y
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG+ A FF E+ KG P+ Y T I G +A M G
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
++ + ++++ DGL G + A+ ++
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQ 541
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ GL G L AK + KM+ G PD T+ LI C+ G + + + +
Sbjct: 522 NILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMIS 581
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G TY + I A + G + A+ ++E+G P Y +I R G+
Sbjct: 582 DGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQL 641
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A+ F E+ +G PN+ YT LI + G + +A + EM + G+ P
Sbjct: 642 AYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHP 691
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L++G NA L A++ ++M+ +G PD +N+ I G
Sbjct: 439 MVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGA 498
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G +D TY ILI + K G +++A L +V +G P Y
Sbjct: 499 IAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTC 558
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RG +A FF ++ G P+ YT I R G A + +M E G
Sbjct: 559 LIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ P ++++ L G+ LA +
Sbjct: 619 VEPNEITYNVLIHALCRTGRTQLAYR 644
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL G+++ A + +M +G P + T+N++I + +SG+VE + + +G
Sbjct: 314 LITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMG 373
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY L+ KAG + EA L +L G P Y +I G R G ++A
Sbjct: 374 LQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEAR 433
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
E+ +G P+ YT L+ A + EM GL P CF
Sbjct: 434 RLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQP--DCF 484
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G L A++ MI G P T+ I C+ G
Sbjct: 544 MVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGN 603
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + TY +LI A+ + G A+R H ++E G P Y
Sbjct: 604 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTL 663
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I G + G ++DA F+ E+ G P+ + L
Sbjct: 664 LIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKAL 699
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M G P + + L+ L G + ++ +M +GS P+ T N +I + +
Sbjct: 228 MLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARK 287
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G++E EM + +L A TY LI + G + +A L + +G P Y
Sbjct: 288 GDLEEAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTY 346
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + GQ + A F E++ G P+ Y +L+ + G EA ++
Sbjct: 347 NAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
GL P ++++ DG G + A ++++
Sbjct: 407 AGLAPTVLTYNILIDGYCRLGDLEEARRLKE 437
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G AG L+ A + + G P + T+N LI+ C+ G+
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G DV TY IL+ A + A ++ G P Y
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G AF + ++G + Y LI + G +A + M+M G
Sbjct: 489 RIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNG 548
Query: 181 LTP 183
L P
Sbjct: 549 LQP 551
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + G L SA KM+++G +P+ T+N LI +C++G
Sbjct: 579 MISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGR 638
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + TY +LI K G ++A R + ++G +P +
Sbjct: 639 TQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKA 698
Query: 121 IIKGAFRRGQFDDAFCFF 138
+ KG F G + A +
Sbjct: 699 LFKG-FDEGHMNHAIEYL 715
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 74/174 (42%), Gaps = 3/174 (1%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
++M G PD++ N ++ + + + ++ + +LG + TY L+ + K
Sbjct: 191 HEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKE 250
Query: 94 GMIDEAFRLLHNLVEDGHNPFPS--LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G D+ LL + G P+ + +I G R+G ++A +++ +
Sbjct: 251 GRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSF- 309
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
Y LIT G +A + +EM G+ P ++ + GL G+ + A+
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ 363
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV GL A ++ A ++++ M+ G +P+ +++LI+ CK+G+++ E+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K G V TY LI + K G +D A ++L +++D P Y +I G R
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ + A S ++ KG PN YT LI G+ G+ + + +M+ G +P
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 188 FDLVTDGLKNCGKHDLAE 205
+ ++ + L G D A
Sbjct: 622 YRVLINHLCAAGLLDKAR 639
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 16/226 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ L A + A + ++M+ G P+ T+ +L++ +CK+G
Sbjct: 349 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408
Query: 61 VEFCVEMYYSVCKLGSCAD----------------VSTYKILIPAVSKAGMIDEAFRLLH 104
+ E+Y + AD V TY L+ + KA +D A LL
Sbjct: 409 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
++ G P +Y +I G + G+ D A F ++ G+ P+ YT+LI + G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
R A L +M + TP + + DGL G+ + A K+ L
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSL 574
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 35/247 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D L+ G AG ++SA+++ +M K G P + T+ SLI+ + K G
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 529
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + K +V TY +I + + G ++A +LL + E G +P Y
Sbjct: 530 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG---------------- 163
+I G + G+ D + F+++ KG PN Y LI +C G
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 649
Query: 164 ----------------GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
F+ + L EM G PI+ + ++ D G+ ++A ++
Sbjct: 650 WPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 709
Query: 208 --EQLEV 212
E +EV
Sbjct: 710 HKEMMEV 716
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 16/220 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI----------------KQGSDPD 44
M D G P LV GL AG + A ++ K+I + P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+ T+ +L++ +CK+ +V+ E+ ++ G + Y LI KAG ID A +
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ + G+ P Y +I F+ G+ D A S++ PN YT +I R G
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+A L M E G +P + + DGL GK DL+
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++ L +A +E A + +M G PD+ T+ LI++ CK+G
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + +G V TY LI A KA + +A + H +V+ G P Y
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 121 IIKGAFRRGQFDDAFCFFSEI----------------KIKGHPPNRPVYTTLITMCGRGG 164
++ G + G AF ++++ PN Y L+ +
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ A L M G P +D + DG GK D A+++
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G + A Q++ +M+++G PD T++ +I +C + +VE ++ + +G D
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V TY ILI + KAG+I++A L + G +P Y +I + Q A F
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+ G PN Y L+ + G +A
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 43/218 (19%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G L L K+++N M+ +G +P+ FNSL+ + C + + ++
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199
Query: 68 YYSVCKLGSCADVSTYKILIPAV------------------------------------- 90
+ G Y I I ++
Sbjct: 200 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 259
Query: 91 ----SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
G D+AF+L+ ++ G P S Y+ +I + + AF F E+K+ G
Sbjct: 260 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMGLTP 183
P+ YT LI + G +E A +L EM +G +P
Sbjct: 320 TPDVYTYTILIDSFCKAG-LIEQAQWLFEEMRSVGCSP 356
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V L+ GL AG ++ + + +M ++G P+ T+ LI +C +G
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 634
Query: 61 VE---------------------FCVEMYYS---VCKLGSCADVSTYK---------ILI 87
++ C +S + LG ++ +Y +LI
Sbjct: 635 LDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLI 694
Query: 88 PAVSKAGMIDEAFRLLHNLVE--DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
SKAG ++ A L ++E +YA +I+ Q ++AF +SE+ +G
Sbjct: 695 DCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 754
Query: 146 HPPNRPVYTTLI 157
P V+ LI
Sbjct: 755 FVPELSVFVCLI 766
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 70/174 (40%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L+ A+++ +M+ + + +C G+ + ++ + + G D STY
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + A +++AF L + G P Y +I + G + A F E++ G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
P YT LI + + +A + M + G P + + DGL G
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 407
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ--------------------- 39
MS KG +P +L+ L AG L+ A+ ++ +M +
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 669
Query: 40 ------------GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC--ADVSTYKI 85
G+ P + LI+ K+G +E +E++ + ++ S D Y
Sbjct: 670 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYAS 729
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
LI A+ A ++EAFRL + G P S++ +IKG ++D+A
Sbjct: 730 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 33/195 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
+ D G+ P + LVQ L +AG ++ ++ +M + G D T +CK G
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 60 ---------------EVEFCVEM---------------YYSVCKLGSCA-DVSTYKILIP 88
+ C M + + SC +V TY+ L+
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
K + R+++ ++ +G NP PSL+ ++ + A+ + + G PP
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 149 NRPVYTTLI-TMCGR 162
VY I ++CG+
Sbjct: 211 GYVVYNIFIGSICGQ 225
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEVEFCVE 66
PV G +L+ AG LE A ++ +M++ S D + + SLI+ +C + +VE
Sbjct: 688 PVYG--MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
+Y + + G ++S + LI + + DEA +L + + +G N
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 791
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +DEA RL + E G Y
Sbjct: 413 VEEALD-YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMT 177
+I + + D+A F ++ + ++ VYT I + G + R EA M
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRME-EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI 530
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ G+TP + CF ++ GL GK A KI
Sbjct: 531 DKGITPTAACFRALSTGLCLSGKVARACKI 560
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++Q S + +M ++G F+ +I +CK G++ ++ ++ + G
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+F + G N Y++LI G+ GR EA EM+E G T S C++ + D
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 196 KNCGKHDLA 204
K D A
Sbjct: 478 TKHRKVDEA 486
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ GL++A +++SA+++ M PD+ T+N++I+ CK+G+
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + G AD TY +I A L + E G P ++
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++ + F + KG PN +YT LI + G +A L M + G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + +V +GL G+
Sbjct: 393 FKPDVVTYSVVVNGLCKNGR 412
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+GF P V ++V GL G +E A + G + ++SLI+ + K+G
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYA 119
V+ ++ + + G D Y LI A +K +DEA L + E+G + Y
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G F+ + ++A + + KG P + L T G+ A L E+ M
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Query: 180 GLTPISRCFDLVT 192
G+ + C D++
Sbjct: 568 GVILDAACEDMIN 580
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
N+LI++ K G VE + ++ + + G + TY L+ + A +D A R+ +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 109 DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
P Y +IKG + GQ A +++ +GH ++ Y T+I C F
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EM E G+ F LV GL GK
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L GL +G + A ++++++ G D +I T+CK+G
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGR 587
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ ++ + + G ++I A+ K G D A +L+H+ + G+ S+
Sbjct: 588 IKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSV 644
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV GL A ++ A ++++ M+ G +P+ +++LI+ CK+G+++ E+
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K G V TY LI + K G +D A ++L +++D P Y +I G R
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ + A S ++ KG PN YT LI G+ G+ + + +M+ G +P
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556
Query: 188 FDLVTDGLKNCGKHDLA 204
+ ++ + L G D A
Sbjct: 557 YRVLINHLCAAGLLDKA 573
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 16/226 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ L A + A + ++M+ G P+ T+ +L++ +CK+G
Sbjct: 284 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 343
Query: 61 VEFCVEMYYSVCKLGSCAD----------------VSTYKILIPAVSKAGMIDEAFRLLH 104
+ E+Y + AD V TY L+ + KA +D A LL
Sbjct: 344 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 403
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
++ G P +Y +I G + G+ D A F ++ G+ P+ YT+LI + G
Sbjct: 404 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 463
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
R A L +M + TP + + DGL G+ + A K+ L
Sbjct: 464 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSL 509
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 35/247 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D L+ G AG ++SA+++ +M K G P + T+ SLI+ + K G
Sbjct: 405 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 464
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + K +V TY +I + + G ++A +LL + E G +P Y
Sbjct: 465 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 524
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG---------------- 163
+I G + G+ D + F+++ KG PN Y LI +C G
Sbjct: 525 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 584
Query: 164 ----------------GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
F+ + L EM G PI+ + ++ D G+ ++A ++
Sbjct: 585 WPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 644
Query: 208 --EQLEV 212
E +EV
Sbjct: 645 HKEMMEV 651
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 16/220 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI----------------KQGSDPD 44
M D G P LV GL AG + A ++ K+I + P+
Sbjct: 319 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 378
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+ T+ +L++ +CK+ +V+ E+ ++ G + Y LI KAG ID A +
Sbjct: 379 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ + G+ P Y +I F+ G+ D A S++ PN YT +I R G
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 498
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+A L M E G +P + + DGL GK DL+
Sbjct: 499 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++ L +A +E A + +M G PD+ T+ LI++ CK+G
Sbjct: 214 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 273
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + +G V TY LI A KA + +A + H +V+ G P Y
Sbjct: 274 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 333
Query: 121 IIKGAFRRGQFDDAFCFFSEI----------------KIKGHPPNRPVYTTLITMCGRGG 164
++ G + G AF ++++ PN Y L+ +
Sbjct: 334 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 393
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ A L M G P +D + DG GK D A+++
Sbjct: 394 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G + A Q++ +M+++G PD T++ +I +C + +VE ++ + +G D
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V TY ILI + KAG+I++A L + G +P Y +I + Q A F
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+ G PN Y L+ + G +A
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKA 347
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 43/218 (19%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G L L K+++N M+ +G +P+ FNSL+ + C + + ++
Sbjct: 75 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134
Query: 68 YYSVCKLGSCADVSTYKILIPAV------------------------------------- 90
+ G Y I I ++
Sbjct: 135 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 194
Query: 91 ----SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
G D+AF+L+ ++ G P S Y+ +I + + AF F E+K+ G
Sbjct: 195 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 254
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMGLTP 183
P+ YT LI + G +E A +L EM +G +P
Sbjct: 255 TPDVYTYTILIDSFCKAG-LIEQAQWLFEEMRSVGCSP 291
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V L+ GL AG ++ + + +M ++G P+ T+ LI +C +G
Sbjct: 510 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 569
Query: 61 VE---------------------FCVEMYYS---VCKLGSCADVSTYK---------ILI 87
++ C +S + LG ++ +Y +LI
Sbjct: 570 LDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLI 629
Query: 88 PAVSKAGMIDEAFRLLHNLVE--DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
SKAG ++ A L ++E +YA +I+ Q ++AF +SE+ +G
Sbjct: 630 DCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 689
Query: 146 HPPNRPVYTTLI 157
P V+ LI
Sbjct: 690 FVPELSVFVCLI 701
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 70/174 (40%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L+ A+++ +M+ + + +C G+ + ++ + + G D STY
Sbjct: 169 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + A +++AF L + G P Y +I + G + A F E++ G
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
P YT LI + + +A + M + G P + + DGL G
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 342
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ--------------------- 39
MS KG +P +L+ L AG L+ A+ ++ +M +
Sbjct: 545 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 604
Query: 40 ------------GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC--ADVSTYKI 85
G+ P + LI+ K+G +E +E++ + ++ S D Y
Sbjct: 605 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYAS 664
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
LI A+ A ++EAFRL + G P S++ +IKG ++D+A
Sbjct: 665 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 714
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEVEFCVE 66
PV G +L+ AG LE A ++ +M++ S D + + SLI+ +C + +VE
Sbjct: 623 PVYG--MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 680
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
+Y + + G ++S + LI + + DEA +L + + +G N
Sbjct: 681 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 726
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P L+ GL G + A ++V++M++ G P L T N+L+ +C +G+V
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V + + + G + TY ++ + K+G A LL + E Y+ II G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G D+AF F+E++IKG + +YTTLI GR+ + A L +M + +TP
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
F + D GK AE++ +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHK 341
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + LV GL G + A ++++M++ G P+ T+ +++ +CKSG+
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + + D Y I+I + K G +D AF L + + G +Y
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G++DD ++ + P+ ++ LI + G+ EA EM + G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
++P + + + DG + D A + L VS
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+QG G LE AK++ +M+ + PD+ ++ L++ +C +GE
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E++ + K D+ Y I+I + A +D+A+ L +L G P Y
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F +++ GH PN Y LI G ++A + E+ G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 181 LT 182
+
Sbjct: 593 FS 594
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF + L++G AG + +++ MIK+ PD+ F++LI+ K G+
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + G D TY LI K +D+A +L +V G P +
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + DD F ++ ++G + Y TLI G+ A EM
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA----EKIEQLEVSL 214
+ P + ++ DGL + G+ + A EKIE+ ++ L
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +R ++L+ G A ++ ++ KM +G D T+N+LI+ C+ G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + D+ +YKIL+ + G ++A + + + +Y
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA+ F + +KG P+ Y +I + G EA +M E G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 181 LTP 183
+P
Sbjct: 558 HSP 560
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P L+ G L+ A M++ M+ +G P++ TFN LI CK+
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + G AD TY LI + G ++ A L +V P Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F +I+ + +Y +I + +A + + G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + ++++ GL C K L+E
Sbjct: 523 VKPDVKTYNIMIGGL--CKKGSLSE 545
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 24/221 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + +L+ GL + G E A ++ K+ K + D+ +N +I +C + +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ S+ G DV TY I+I + K G + EA L + EDGH+P Y
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 121 IIKGAFRRGQFDDAFCFFSEIK----------------------IKGHPPNRPVYTTLIT 158
+I+ G + EIK GH P+ +TTL+
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLR 627
Query: 159 -MC-GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
C +A M MG P ++ V GL N
Sbjct: 628 PFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL G L++A + N+M +G D+ + +LI C +G + ++ + K
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
DV + LI K G + EA L +++ G +P Y +I G + Q D A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ KG PN + LI + + +M+ G+ + ++ + G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 195 LKNCGKHDLAEKIEQLEVSLR 215
GK ++A+++ Q VS R
Sbjct: 432 FCELGKLEVAKELFQEMVSRR 452
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P +++ + +G A +++ KM ++ D ++ +I+ +CK G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G AD+ Y LI AG D+ +LL ++++ P ++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A E+ +G P+ YT+LI + + +A + L M G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
P R F+++ +G C + + + +E ++SLR V
Sbjct: 383 CGPNIRTFNILINGY--CKANLIDDGLELFRKMSLRGV 418
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M +G +L T + +I C+ ++ + KLG D T+ LI +
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G + EA L+ +VE GH P ++ G G+ DA + G PN
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y ++ + + G+ A L +M E + + + ++ DGL G D A
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 70/184 (38%), Gaps = 19/184 (10%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V+ ++++ GL G L A + KM + G P+ T+N LI G+
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPSLYA 119
++ + + G D ST + A L +++ GH P F +L
Sbjct: 581 SAKLIEEIKRCGFSVDASTLRF-------------ALSTLARMLKAGHEPDVFTFTTLLR 627
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
P DA F +K G+ PN Y T+I G + L +M E
Sbjct: 628 PFC--LEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFER 685
Query: 180 GLTP 183
G P
Sbjct: 686 GCQP 689
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV GL A ++ A ++++ M+ G +P+ +++LI+ CK+G+++ E+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K G V TY LI + K G +D A ++L +++D P Y +I G R
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ + A S ++ KG PN YT LI G+ G+ + + +M+ G +P
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 188 FDLVTDGLKNCGKHDLAE 205
+ ++ + L G D A
Sbjct: 622 YRVLINHLCAAGLLDKAR 639
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 16/226 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ L A + A + ++M+ G P+ T+ +L++ +CK+G
Sbjct: 349 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408
Query: 61 VEFCVEMYYSVCKLGSCAD----------------VSTYKILIPAVSKAGMIDEAFRLLH 104
+ E+Y + AD V TY L+ + KA +D A LL
Sbjct: 409 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
++ G P +Y +I G + G+ D A F ++ G+ P+ YT+LI + G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
R A L +M + TP + + DGL G+ + A K+ L
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSL 574
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 35/247 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D L+ G AG ++SA+++ +M K G P + T+ SLI+ + K G
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 529
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + K +V TY +I + + G ++A +LL + E G +P Y
Sbjct: 530 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG---------------- 163
+I G + G+ D + F+++ KG PN Y LI +C G
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 649
Query: 164 ----------------GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
F+ + L EM G PI+ + ++ D G+ ++A ++
Sbjct: 650 WPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 709
Query: 208 --EQLEV 212
E +EV
Sbjct: 710 HKEMMEV 716
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 16/220 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI----------------KQGSDPD 44
M D G P LV GL AG + A ++ K+I + P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+ T+ +L++ +CK+ +V+ E+ ++ G + Y LI KAG ID A +
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ + G+ P Y +I F+ G+ D A S++ PN YT +I R G
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+A L M E G +P + + DGL GK DL+
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++ L +A +E A + +M G PD+ T+ LI++ CK+G
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + +G V TY LI A KA + +A + H +V+ G P Y
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 121 IIKGAFRRGQFDDAFCFFSEI----------------KIKGHPPNRPVYTTLITMCGRGG 164
++ G + G AF ++++ PN Y L+ +
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ A L M G P +D + DG GK D A+++
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G + A Q++ +M+++G PD T++ +I +C + +VE ++ + +G D
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V TY ILI + KAG+I++A L + G +P Y +I + Q A F
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+ G PN Y L+ + G +A
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 43/218 (19%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G L L K+++N M+ +G +P+ FNSL+ + C + + ++
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199
Query: 68 YYSVCKLGSCADVSTYKILIPAV------------------------------------- 90
+ G Y I I ++
Sbjct: 200 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 259
Query: 91 ----SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
G D+AF+L+ ++ G P S Y+ +I + + AF F E+K+ G
Sbjct: 260 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMGLTP 183
P+ YT LI + G +E A +L EM +G +P
Sbjct: 320 TPDVYTYTILIDSFCKAG-LIEQAQWLFEEMRSVGCSP 356
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V L+ GL AG ++ + + +M ++G P+ T+ LI +C +G
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 634
Query: 61 VE---------------------FCVEMYYS---VCKLGSCADVSTYK---------ILI 87
++ C +S + LG ++ +Y +LI
Sbjct: 635 LDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLI 694
Query: 88 PAVSKAGMIDEAFRLLHNLVE--DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
SKAG ++ A L ++E +YA +I+ Q ++AF +SE+ +G
Sbjct: 695 DCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 754
Query: 146 HPPNRPVYTTLI 157
P V+ LI
Sbjct: 755 FVPELSVFVCLI 766
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 70/174 (40%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L+ A+++ +M+ + + +C G+ + ++ + + G D STY
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + A +++AF L + G P Y +I + G + A F E++ G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
P YT LI + + +A + M + G P + + DGL G
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 407
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ--------------------- 39
MS KG +P +L+ L AG L+ A+ ++ +M +
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 669
Query: 40 ------------GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC--ADVSTYKI 85
G+ P + LI+ K+G +E +E++ + ++ S D Y
Sbjct: 670 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYAS 729
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
LI A+ A ++EAFRL + G P S++ +IKG ++D+A
Sbjct: 730 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 33/195 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
+ D G+ P + LVQ L +AG ++ ++ +M + G D T +CK G
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 60 ---------------EVEFCVEM---------------YYSVCKLGSCA-DVSTYKILIP 88
+ C M + + SC +V TY+ L+
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
K + R+++ ++ +G NP PSL+ ++ + A+ + + G PP
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 149 NRPVYTTLI-TMCGR 162
VY I ++CG+
Sbjct: 211 GYVVYNIFIGSICGQ 225
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEVEFCVE 66
PV G +L+ AG LE A ++ +M++ S D + + SLI+ +C + +VE
Sbjct: 688 PVYG--MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
+Y + + G ++S + LI + + DEA +L + + +
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHE 788
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ G + A+ + M G PDL T++ L+ET K
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + GS D+++Y +L+ A +K+G I EA + H + G P + Y+
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G++DD F E+K P+ Y LI + G GG F E +M E
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P ++ + G H+ A KI Q
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQ 446
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D G P + LV+ LE ++ +M GS PD+ ++N L+E KSG
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +++ + G + +TY +L+ ++G D+ +L + +P + Y
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G F + F ++ + P+ Y +I CG+GG +A L MT
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S+ + V + ++ A
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEA 476
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ +G + +Q+ +M +DPD T+N LIE + G
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V +++ + + D+ TY+ +I A K G+ ++A ++L + + P Y
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + +++A F+ + G P+ + +L+ RGG E+ L + + G
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ F+ + K GK + A K
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVK 548
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + ++L++ +G ++ A + ++M G P+ T++ L+ +SG
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + D +TY ILI + G E L H++VE+ P Y
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G +DA + P+ YT +I G+ + EA M E+G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 181 LTPISRCF 188
P F
Sbjct: 488 SNPSIETF 495
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +P ++L++ GY + + + M+++ +PD+ET+ +I K G
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + Y +I A +A + +EA + + E G NP +
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G ++ S + G P NR + I +GG+F EA ++M +
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 181 LTPISRCFDLV 191
P R + V
Sbjct: 558 CDPDERTLEAV 568
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y I+I + + G++D+ + + G + Y +I R G+++ + +K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEA-ANYLMEMTEMGLTPISRCFDLVTDG--LKNCG 199
+ P+ Y T+I C RGG E EM G+ P D+VT L C
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQP-----DIVTYNTLLSACA 258
Query: 200 KHDLAEKIEQL 210
L ++ E +
Sbjct: 259 IRGLGDEAEMV 269
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G NP + L+ G ++ ++ ++++++ G + +TFN+ IE + G+
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
E V+ Y + K D T + ++ S A ++DE
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE 580
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V ++++ G + A + +M + PD+ T+NSLI +CKSG+
Sbjct: 196 MSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGK 255
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D+ TY L+ A+ K +D+A LL NL + G P Y
Sbjct: 256 ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTI 315
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +DA F ++ +KG+ YT +I G F EA L +M +
Sbjct: 316 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNS 375
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++++ L + ++D AE +
Sbjct: 376 CFPNALTYEIIIRSLFDNDENDKAENL 402
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ GL +G + A ++V++M +G PD+ T++SL++ +CK+ +V+ + +
Sbjct: 238 PDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIAL 297
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ G ++ TY ILI + K G +++A + +L+ G+N + Y +I G
Sbjct: 298 LKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 357
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+G FD+A S++K PN Y +I +A N L EM GL
Sbjct: 358 KGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGL 411
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
N G ++ AK ++ M+KQG +P+ T++SL++ C EV ++ ++ G A+V
Sbjct: 147 NEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVW 206
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+Y I+I K M DEA L + P Y +I G + G+ A E+
Sbjct: 207 SYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEM 266
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G PP+ Y++L+ + + +A L + + G+ P + ++ DGL G+
Sbjct: 267 HDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRL 326
Query: 202 DLAEKI 207
+ A I
Sbjct: 327 EDAHNI 332
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ L ++ A ++ + QG P++ T+ LI+ +CK G
Sbjct: 266 MHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGR 325
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G V+TY ++I G+ DEA LL + ++ P Y
Sbjct: 326 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEI 385
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+ F + D A E+ +G
Sbjct: 386 IIRSLFDNDENDKAENLLREMITRG 410
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P L+ GL G + A ++V++M++ G P L T N+L+ +C +G+V
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V + + + G + TY ++ + K+G A LL + E Y+ II G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G D+AF F+E++IKG + +YTTLI GR+ + A L +M + +TP
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
F + D GK AE++ +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHK 341
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+QG G LE AK++ +M+ + PD+ ++ L++ +C +GE
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E++ + K D+ Y I+I + A +D+A+ L +L G P Y
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F +++ GH PN Y LI G ++A + E+ G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 181 LTPISRCFDLVTDGLKN 197
+ + +V D L +
Sbjct: 593 FSVDASTVKMVVDMLSD 609
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + LV GL G + A ++++M++ G P+ T+ +++ +CKSG+
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + + D Y I+I + K G +D AF L + + G +Y
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G++DD ++ + P+ ++ LI + G+ EA EM + G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
++P + + + DG + D A + L VS
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF + L++G AG + +++ MIK+ PD+ F++LI+ K G+
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + G D TY LI K +D+A +L +V G P +
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + DD F ++ ++G + Y TLI G+ A EM
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA----EKIEQLEVSL 214
+ P + ++ DGL + G+ + A EKIE+ ++ L
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +R ++L+ G A ++ ++ KM +G D T+N+LI+ C+ G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + D+ +YKIL+ + G ++A + + + +Y
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA+ F + +KG P+ Y +I + G EA +M E G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 181 LTP 183
+P
Sbjct: 558 HSP 560
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P L+ G L+ A M++ M+ +G P++ TFN LI CK+
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + G AD TY LI + G ++ A L +V P Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F +I+ + +Y +I + +A + + G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + ++++ GL C K L+E
Sbjct: 523 VKPDVKTYNIMIGGL--CKKGSLSE 545
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + +L+ GL + G E A ++ K+ K + D+ +N +I +C + +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ S+ G DV TY I+I + K G + EA L + EDGH+P Y
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+I+ G + EIK G + ++ M G
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL G L++A + N+M +G D+ + +LI C +G + ++ + K
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
DV + LI K G + EA L +++ G +P Y +I G + Q D A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ KG PN + LI + + +M+ G+ + ++ + G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 195 LKNCGKHDLAEKIEQLEVSLR 215
GK ++A+++ Q VS R
Sbjct: 432 FCELGKLEVAKELFQEMVSRR 452
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P +++ + +G A +++ KM ++ D ++ +I+ +CK G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G AD+ Y LI AG D+ +LL ++++ P ++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A E+ +G P+ YT+LI + + +A + L M G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 181 LTPISRCFDLVTDG 194
P R F+++ +G
Sbjct: 383 CGPNIRTFNILING 396
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M +G +L T + +I C+ ++ + KLG D T+ LI +
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G + EA L+ +VE GH P ++ G G+ DA + G PN
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y ++ + + G+ A L +M E + + + ++ DGL G D A
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 37/243 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V + ++ L A ++ A +++N M+K G PD T+NS++ C SG+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 61 --------------------VEFCVEMYYSVCKLGSCA----------------DVSTYK 84
V + + M Y +CK G C +++TY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDY-LCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
L+ + G + E LL +V +G +P +++ +I +G+ D A FS+++ +
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQ 400
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G PN Y +I + + GR +A Y +M + GL+P + ++ + GL C K + A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 205 EKI 207
E++
Sbjct: 461 EEL 463
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P + L+ GL E A++++ +M+ +G + FNS+I++ CK G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G +V TY LI AG +DEA +LL +V G P Y+
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E++ G P+ Y ++ + R A + +TE G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
++++ GL KN D + + L
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ---GSDPDLETFNSLIETICK 57
M++ G P V ++L++GL + + A ++++ M GS PD+ ++ ++I K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+ + Y+ + G DV TY +I A+ KA +D+A +L+ +V++G P
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y I+ G GQ +A F +++ G P+ Y+ L+ + GR +EA MT
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 178 EMGLTP 183
+ GL P
Sbjct: 329 KRGLKP 334
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A +MI +G P +NSLI +C +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + G C + + +I + K G + E+ +L +V G P Y
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A S + G PN Y+TLI + R +A EM G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 577 VSPDIITYNIILQGL 591
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V LL+ L G A+++ + M K+G P++ T+ +L++ G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 61 VEFCVEMYYSV---CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ VEM+ + + G D + ILI A + G +D+A + + + G NP
Sbjct: 352 L---VEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I + G+ +DA +F ++ +G P VY +LI ++ A ++EM
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ G+ + F+ + D G+ +EK+ +L V +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ G G + A ++M+ +G PD+ T+NS+I +CK+ ++
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ ++ K G D TY ++ +G EA L + DG P Y+ ++
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +A F + +G P Y TL+ G VE L M G+ P
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
F ++ N GK D A
Sbjct: 371 HYVFSILICAYANQGKVDQA 390
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G PD F+ LI G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G + TY +I + K+G +++A ++++G +P +Y
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +++ A E+ +G N + ++I + GR +E+ M +G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + +G GK D A K+
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKL 533
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G AG ++ A ++++ M+ G P+ T+++LI CK +E
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D+ TY I++ + + A L + E G S Y I+ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ DDA F + + + +I + GR EA + + + GL P
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ L+ + + G L E+++QL +S+
Sbjct: 686 YWTYRLMAENIIGQG---LLEELDQLFLSM 712
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 81/178 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL +AK++ ++ + G+ +L T+N ++ +CK+
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++M+ ++C + + T+ I+I A+ K G DEA L +G P Y
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G + + ++ + G A YL + E
Sbjct: 692 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 75/175 (42%), Gaps = 1/175 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++ G + ++++ GL + A QM + + TFN +I+ + K G
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + TY+++ + G+++E +L ++ ++G +
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
I++ +RG+ A + S I K + I + GG++ E +L E
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYYRFLPE 780
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 5/156 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ D+ TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTY 90
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIK 142
ILI +AG +D F L N+++ G + P++KG + DA +
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G PN Y L+ R EA L M +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P +R + ++ + C K D+ + + L+
Sbjct: 383 LKPDARTYTMIINEF--CKKGDVWKGXKLLK 411
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 228 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 AHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KITYTTLIDGC--CKEGDLDSAFEH 339
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLM 429
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L+SA + +MI++ D + +LI +C+ G
Sbjct: 308 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
>gi|260780468|gb|ACX50780.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780484|gb|ACX50788.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +K+G +++A RLLH +
Sbjct: 19 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 78
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+++G P ++ ++ G + G+ ++A +F + G N Y++LI G+ GR
Sbjct: 79 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EA EM+E G T S C++ + D GK D A
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 176
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ TF+ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGR 102
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 103 VEEALD-YFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 161
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I + G+ D+A F ++ + ++ VYT I
Sbjct: 162 ALIDAFTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTI 198
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKRIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGN 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV T+ +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 185
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 19 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 78
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G P+ ++ ++ + GR EA +Y GL S + + DGL G+
Sbjct: 79 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 202 DLAEKI 207
D AE++
Sbjct: 139 DEAERL 144
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ GL G L AK++V +M ++G PD T+ LI+ CK G+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + K G D + LI + G + EA R L ++E G P + Y
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G F E++ GH P Y L+ + G+ A L M +G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 181 LTP 183
+ P
Sbjct: 536 VVP 538
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ F P V +L+ GL G L+ A ++ +M +G P+ TF +LI C +G
Sbjct: 287 MENRVF-PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+Y + + G DV TY LI + K G + EA +L+ + + G P Y
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A E+ +G + +T LI+ R G+ +EA L EM E G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + +V G C K D+ + L+
Sbjct: 466 IKPDDATYTMVIHGF--CKKGDVKTGFKLLK 494
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G+ P V ++L+ L + A+ + ++ K+G P + +FN+LI CKSG ++
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + DV TY +LI + K G +D+A +L + + G P + +I
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G G+ D + ++ KG P+ Y TLI + G EA ++EMT+ GL
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIE 208
P + ++ DG C + DL +E
Sbjct: 398 PDKFTYTMLIDGC--CKEGDLESALE 421
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
P L L+ A +++ G PD+ FN L+ +CK ++ ++
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ K G V ++ LI K+G +D+ FRL ++E+ P Y+ +I G +
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
GQ DDA F E+ +G PN +TTLI GR +M G+ P +
Sbjct: 309 GQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITY 368
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ + +GL G A+K+
Sbjct: 369 NTLINGLCKVGDLREAKKL 387
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+ G G + ++ +M+++G PD+ T+N+LI +CK G+
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G D TY +LI K G ++ A + +V++G +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R GQ +A E+ G P+ YT +I + G L EM G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++++ +GL G+
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQ 520
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +++ G G +++ +++ +M G P + T+N L+ +CK G+
Sbjct: 461 MLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQ 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
++ + ++ LG D TY IL+ +A
Sbjct: 521 MKNANMLLDAMLNLGVVPDDITYNILLERTLQA 553
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + GF P + + L+ G AG + A ++ +M ++ +P++ +F +LI+ +C +
Sbjct: 253 IREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKK 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +++ + G AD TY LI K G I + + LL N+++ GH P P Y
Sbjct: 313 MEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLH 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + ++ E++ G P+ +Y +I + + G E EM G
Sbjct: 373 IMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATG 432
Query: 181 LTPISRCFDLVTDGL 195
L+P F ++ G
Sbjct: 433 LSPGLDTFVIMIHGF 447
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 37/231 (16%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G + ++++ MI+QG P+ T+ ++ K E+E C+E+ + K+G
Sbjct: 338 LISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIG 397
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D++ Y I+I K G I E R+ + + G +P + +I G + +A
Sbjct: 398 CTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEAC 457
Query: 136 CFFSE-------------------------------------IKIKGHPPNRPVYTTLIT 158
FF E I KG N +T I
Sbjct: 458 EFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIH 517
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G EA +Y ++M + G+ P F + GL+ +A +I +
Sbjct: 518 ALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITE 568
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ +A ++ A +++++M K G +PD F L++ +CK+G V+ ++ + ++
Sbjct: 163 VLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDM-RI 221
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+ + L+ + G + EA +L + E G P +Y ++ G G+ DA
Sbjct: 222 RFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDA 281
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ E++ K PN +TTLI + EA EM G + + + G
Sbjct: 282 YDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISG 341
Query: 195 LKNCGK 200
GK
Sbjct: 342 FCKWGK 347
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+Q L +E A ++ +M G D T+ +LI CK G+
Sbjct: 288 MRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ ++ + G + TY ++ A K ++E L+ + + G P ++Y
Sbjct: 348 ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ A + G+ + ++E++ G P + +I VEA + EM G
Sbjct: 408 VIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRG 467
Query: 181 L 181
L
Sbjct: 468 L 468
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 1/182 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P + + GL GY++ A ++ +M+ +G P++ T SLI+ +CK G
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E ++ + K S +V TY ++I K G + A LL +VE G P + Y
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G FD AF +++K++G PN Y +I + G+ EA L T
Sbjct: 362 TLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQ 421
Query: 180 GL 181
GL
Sbjct: 422 GL 423
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF ++V+ G + + +M + G+ P++ +++ I+ +C+ G
Sbjct: 207 MWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGY 266
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG-HNPFPSLYA 119
V+ + + G +V T+ LI + K G ++ AFRL LV+ + P Y
Sbjct: 267 VKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYT 326
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ A + +G PN YTTLI +GG F A + +M
Sbjct: 327 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLE 386
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
G P ++ + G GK A K+ ++ S
Sbjct: 387 GFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATS 420
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + P V +++ G G L A+ ++ +M++QG P+ T+ +LI CK G
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGS 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G ++ TY +I K G I EA+++L G + Y
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTI 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G A F ++ K P+ YTT+I M + + ++ + +G
Sbjct: 433 LITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + G GK A K+
Sbjct: 493 LVPTKQTYTSMIAGYCRLGKLTSALKV 519
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 2/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G G + A +++NKM +G P++ T+N++I CK G+
Sbjct: 348 MVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ G D TY ILI K G I A L + E +P Y
Sbjct: 408 IQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTT 467
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II ++ Q + + F + G P + YT++I R G+ A M + G
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHG 527
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P S + + L C + L E E L
Sbjct: 528 CLPDSITYGALISSL--CKESRLEEARALFETML 559
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 38/228 (16%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQ--GSDPDLETFNSLIETICKSGEVE---------- 62
+L GL + G A++ + M + G PD +F +L+ C+ G E
Sbjct: 149 VLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMW 208
Query: 63 ---FCV----------------------EMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
FC+ +++ + ++G+ ++ Y I + + G +
Sbjct: 209 AQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVK 268
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIKIKGHPPNRPVYTTL 156
+AF +L +V G P + +I G + G + AF F +K + PN YT +
Sbjct: 269 QAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVM 328
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
I + G+ A L M E GL P + + + G G D A
Sbjct: 329 IGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRA 376
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + + ++ G G ++ A +++ QG D T+ LI CK G
Sbjct: 383 MKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGH 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + + D+ TY +I + ++++ +L + G P Y
Sbjct: 443 ITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTS 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ A F + G P+ Y LI+ + R EA M +
Sbjct: 503 MIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKH 562
Query: 181 LTP 183
L P
Sbjct: 563 LVP 565
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 65/159 (40%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ G++ A + +M ++ PD+ T+ ++I C+ ++E +++ +
Sbjct: 432 ILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSI 491
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G TY +I + G + A ++ +V+ G P Y +I + + ++A
Sbjct: 492 GLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEA 551
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
F + K P TL R + A ++L
Sbjct: 552 RALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFL 590
>gi|50261843|gb|AAT72474.1| AT1G03560 [Arabidopsis lyrata subsp. petraea]
Length = 201
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G +E A +++++MI +G +PD+ T++ ++ +CK+G
Sbjct: 11 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGR 70
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +DEA RL + E G Y
Sbjct: 71 VEEAMD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 129
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 130 ALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMID 189
Query: 179 MGLTPISRCF 188
G+TP + CF
Sbjct: 190 KGITPTAACF 199
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K G +++A RLLH ++++G NP Y+ ++ G
Sbjct: 7 VFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLC 66
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 67 KNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 126
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D GK D A
Sbjct: 127 CYNALIDAFTKHGKVDEA 144
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
E + + N++ G P ++Y +I G + G +DA + +G P+ Y+ ++
Sbjct: 3 EGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVV 62
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 63 NGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERL 112
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P ++++ L AG +E A + ++M G P+L T N +++ +CK+ + E
Sbjct: 385 KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEP 444
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
EM+ + + G + TY LI + K G +D+A+RL N+++ GHN P +Y +I+
Sbjct: 445 AYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIR 504
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F G+ +D F E+ +G P+ + T + + G + ++ G P
Sbjct: 505 NFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLP 564
Query: 184 ISRCFDLVTDGLKNCGK 200
R + ++ GL G+
Sbjct: 565 DVRSYSILIHGLTKAGQ 581
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + + + AG +E + + + G PD+ +++ LI + K+G+
Sbjct: 522 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 581
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++++ + G D Y ++ K+G +D+A+ +L + P + Y
Sbjct: 582 ARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGS 641
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + + D+A+ F E K KG N VY++LI G+ GR EA L EM + G
Sbjct: 642 IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 701
Query: 181 LTPISRCFDLVTDGL 195
LTP ++ + D L
Sbjct: 702 LTPNVYTWNSLMDAL 716
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P VR +L+ GL AG + + M +QG D +N++++ CKSG+++
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + V+TY +I ++K +DEA+ L G +Y+ +I G
Sbjct: 621 YEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 680
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D+A+ E+ KG PN + +L+ + EA M EM +P
Sbjct: 681 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 740
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + ++ +GL K++ A
Sbjct: 741 TYTYSILINGLCRVQKYNKA 760
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V LV+ L G +E A +V+++ +PD+ +N I+ K+G
Sbjct: 208 MQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 267
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D +Y +I + KAG + EA L + + P Y
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G GQF++A+ ++K +G P+ + +++T G+ R V+ A L E +
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGK-KRKVDEALTLFEAMKKD 386
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S ++++ D L GK + A I
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMI 413
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+K+G P++ T+NSL++ + K+ E+ + + S+ ++
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + + ++AF + + G P Y +I G + G DA
Sbjct: 737 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDAC 796
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
F K G P+ + LI R +EA + E
Sbjct: 797 SLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEE 836
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G+ P LV L+ L+ A++++ M + P + LI + ++ +
Sbjct: 138 MSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQ 197
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + ++G V + L+ A+++ G ++ A L+ + P LY
Sbjct: 198 PERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNV 257
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G D A+ FF E+K +G P+ YT++I + + GR EA +M
Sbjct: 258 CIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETER 317
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + G + G+ + A K+
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKL 344
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ L+ A + A M + P+ T++ LI +C+ +
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G +V TY +I ++K G I +A L +G P + +
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G + +A+ F E ++KG
Sbjct: 817 LIEGMSHANRAIEAYHVFEETRLKG 841
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + GF P + + L+ G AG + A ++ +M ++ +P++ +F +LI+ +C +
Sbjct: 286 IREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKK 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +++ + G AD TY LI K G I + + LL N+++ GH P P Y
Sbjct: 346 MEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLH 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + ++ E++ G P+ +Y +I + + G E EM G
Sbjct: 406 IMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATG 465
Query: 181 LTPISRCFDLVTDGL 195
L+P F ++ G
Sbjct: 466 LSPGLDTFVIMIHGF 480
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 37/231 (16%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G + ++++ MI+QG P+ T+ ++ K E+E C+E+ + K+G
Sbjct: 371 LISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIG 430
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D++ Y I+I K G I E R+ + + G +P + +I G + +A
Sbjct: 431 CTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEAC 490
Query: 136 CFFSE-------------------------------------IKIKGHPPNRPVYTTLIT 158
FF E I KG N +T I
Sbjct: 491 EFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIH 550
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G EA +Y ++M + G+ P F + GL+ +A +I +
Sbjct: 551 ALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITE 601
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ +A ++ A +++++M K G +PD F L++ +CK+G V+ ++ + ++
Sbjct: 196 VLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDM-RI 254
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+ + L+ + G + EA +L + E G P +Y ++ G G+ DA
Sbjct: 255 RFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDA 314
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ E++ K PN +TTLI + EA EM G + + + G
Sbjct: 315 YDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISG 374
Query: 195 LKNCGK 200
GK
Sbjct: 375 FCKWGK 380
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V L+Q L +E A ++ +M G D T+ +LI CK G+
Sbjct: 321 MRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ ++ + G + TY ++ A K ++E L+ + + G P ++Y
Sbjct: 381 ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ A + G+ + ++E++ G P + +I VEA + EM G
Sbjct: 441 VIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRG 500
Query: 181 L 181
L
Sbjct: 501 L 501
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 383 LKPDARTYTMIINEF--CKKGDVWK 405
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 228 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P+ +++ L+ Y + ++++ G L FN L+ CK G++
Sbjct: 103 FWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQ 162
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V +Y L+ + G +DE FRL ++ G P Y+ +I G
Sbjct: 163 SVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGL 222
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ +KG PN +TTLI + GR A +M L+P
Sbjct: 223 CKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 282
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 283 ITYNTLIYGL--CKKGDLKQ 300
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 AHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KITYTTLIDGC--CKEGDLDSAFEH 339
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L+SA + +MI++ D + +LI +C+ G
Sbjct: 308 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + ++T ++E + K + Y + + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L++GL +A E ++++ +M + D TFN L++ C++G
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG ++ DA S++ +G P N + TLI + G +A L +M G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK D E +E L V
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTD--EALELLNV 532
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P ++++GL +A A+ ++++MI+QG + TFN+LI +CK G
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG DEA LL+ +V G +P +Y+
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R G+ + F I+ + +Y +I+ + G A +L M G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607
Query: 181 LTPISRCFDLVTDGLKNCG 199
P + ++ GL + G
Sbjct: 608 CVPNESTYTILIRGLASEG 626
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L G + A ++++M ++G P ++ ++E C+ G V + + G
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 187
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV +++ A+ G +D+A LL +L G P Y ++KG ++
Sbjct: 188 CALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 247
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ PPN + TLI+ R G F L +M E G TP R + + DG+
Sbjct: 248 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGI 307
Query: 196 KNCGKHDLAEKI 207
G +A +I
Sbjct: 308 CKEGHLKVAHEI 319
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 86/187 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M+ G PD+ T+ ++I CK G ++ V + S+
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + A +A L+ +++ G P + +I ++G +
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G++P + + +
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 550
Query: 194 GLKNCGK 200
L G+
Sbjct: 551 ALSREGR 557
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L++ + + G ++ A ++ + G +PD+ ++N++++ +C + E+ + +
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ ++ T+ LI + + G+ + +L + E G P +YA II G + G
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKV 315
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + + G PN Y TL+ R+ E L EM + F+++ D
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375
Query: 194 GLKNCGKHD-LAEKIEQLEV 212
G D + E +EQ+ V
Sbjct: 376 FFCQNGLVDRVIELLEQMLV 395
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + +++GL A ++++ +M++ P++ TFN+LI +C++G E
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 281
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + G D+ Y +I + K G + A +L+ + G P Y ++KG
Sbjct: 282 HEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKG 341
Query: 125 AFRRGQFD-------------------------DAFC----------FFSEIKIKGHPPN 149
+++ D FC ++ + G P+
Sbjct: 342 LCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPD 401
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
YTT+I + G EA L MT G P + + +V GL
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 76/162 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ G G ++ A ++ M G P+ ++ +++ +C +
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G + T+ LI + K G++++A LL ++ +G +P Y+ +I G
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 516
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+ G+ D+A + + KG PN +Y+++ + R GR
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P + L G + QM + + D +N++I ++CK GE
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
E +E + G + STY ILI ++ G + EA +L L G
Sbjct: 593 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 82/207 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++++ G SA +++ + +G D+ N ++ IC G
Sbjct: 148 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G DV +Y ++ + A L+ +V P +
Sbjct: 208 VDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G F+ +++ G P+ +Y T+I + G A L M G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG 327
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P C++ + GL + + + E++
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEEL 354
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---LYAPIIKGAFRRGQFDDAFCFFS 139
Y ++ +AG ++ A RL + P P Y P+++ RG+ DA
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV------PVPPNAYTYFPVVRALCARGRIADALAVLD 146
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT-PISRCFDLVTDGLKNC 198
E+ +G P P+Y ++ RGG F A L ++ G + C +LV + + +
Sbjct: 147 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC-NLVLNAICDQ 205
Query: 199 GKHDLA 204
G D A
Sbjct: 206 GSVDKA 211
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GL N G LE A + +KM+ G P++ T+N+LI CK
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ V K +V T+ +I A K GM++E F L +++++G P S Y
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+ A +E++ KG + Y LI + + A L EM +G
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478
Query: 181 LTPISRCFDLVTDG 194
L P ++ + DG
Sbjct: 479 LKPNHVTYNTLMDG 492
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G + +AK+ +M KQG P++ T+NSLI +C +G++E ++++ +
Sbjct: 277 NTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVG 336
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG ++ TY LI K M+ EA ++ ++ + P + +I + G ++
Sbjct: 337 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEE 396
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F S + +G PN Y LI R A L EM GL ++++ D
Sbjct: 397 GFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILID 456
Query: 194 GLKNCGKHDLAEKI 207
GL K AEK+
Sbjct: 457 GLCKNDKSRNAEKL 470
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S + P V + ++ G +E + + M+ +G P++ T+N LI +C+ +
Sbjct: 369 VSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQD 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G DV TY ILI + K A +LL+ + G P Y
Sbjct: 429 LQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNT 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ A + ++ + PN Y LI + + A L EM E G
Sbjct: 489 LMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG 548
Query: 181 LTPISRCFDLV 191
L P +D+V
Sbjct: 549 LNPNRTTYDIV 559
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 5/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLL---NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK 57
M G +P V + LV G +AG + A+ + +M+ P+ TFN+LI+ CK
Sbjct: 226 MKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCK 285
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
V + + + K G ++ TY LI + G ++EA L +V G P
Sbjct: 286 DENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVT 345
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G ++ +A F ++ + PN + T+I + G E + M
Sbjct: 346 YNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSML 405
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ G+ P ++ + GL C K DL E L
Sbjct: 406 DEGILPNVSTYNCLIAGL--CRKQDLQAAKELL 436
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 5/206 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF + + L+ L+ + + + +MIK+ +L TFN I +C++G++
Sbjct: 158 DYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLN 217
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSK---AGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ + G +V TY L+ K AG + +A + ++ + P +
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFN 277
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + A F E++ +G PN Y +LI G+ EA + +M +
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL 337
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
GL P ++ + +G C K + E
Sbjct: 338 GLKPNIVTYNALINGF--CKKKMMKE 361
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 3/194 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D+LV + L A + + G L + N L+ + K ++ +Y + K
Sbjct: 134 DMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK 193
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR---GQ 130
+++T+ I I + +AG +++A + ++ G +P Y ++ G +R G+
Sbjct: 194 RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGK 253
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
A F E+ PN + TLI + A EM + GL P ++
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313
Query: 191 VTDGLKNCGKHDLA 204
+ +GL N GK + A
Sbjct: 314 LINGLCNNGKLEEA 327
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V +L+ G ++ AKQ+ N+MI QG P+ ++ +LI C+ G+
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G D+ TY +L+ K G + +AFRL + P +Y
Sbjct: 422 LREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTI 481
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G + A FSE+ + G P+ +YTT+I + G EA +M E G
Sbjct: 482 LIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDG 541
Query: 181 LTPISRCFDLVTDGL 195
P ++++ G
Sbjct: 542 CPPNEFSYNVIIRGF 556
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ GL AG A ++ + M+ +G PD+ T+ ++I +CK GE
Sbjct: 156 GLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAA 215
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + ++G DV TY LI ++ K +++EA + + G +P Y +I+G
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +A +E+ P+ ++ LI + + G +EA L MTEMG+ P
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP 334
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++L+ +++ ++ K+IK G P + TF +LI +CK+GE
Sbjct: 117 MELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ + G DV TY +I + K G A L+ + E G P Y+
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYST 236
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + ++A FS +K KG P YT+LI R+ EA+ L EMT +
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 181 LTPISRCFDLVTD 193
+ P F L+ D
Sbjct: 297 IMPDIVTFSLLID 309
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+QGL + + A M+N+M PD+ TF+ LI+ CK G
Sbjct: 257 MKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGN 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ ++G +V TY L+ S + EA +L ++ G P Y+
Sbjct: 317 VLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSI 376
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F+E+ +G PN YTTLI + G+ EA +M G
Sbjct: 377 LINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNG 436
Query: 181 LTPISRCFDLVTDGL 195
P + ++ +G
Sbjct: 437 YLPDLCTYSVLLEGF 451
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V + L+ G + A+++ + MI +G PD+ +++ LI C
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G + +Y LI A + G + EA L ++ +G+ P Y+
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G ++G AF F ++ PN +YT LI + G A E+ G
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + + + +GL C + L E +E
Sbjct: 507 LQPDVQIYTTIINGL--CKEGLLDEALE 532
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + +L++G GYL A ++ M P+L + LI+++CKSG
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGN 491
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G DV Y +I + K G++DEA + EDG P Y
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNV 551
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + A E++ KG
Sbjct: 552 IIRGFLQHKDESRAVQLIGEMRDKG 576
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ P + LL+ G + A+ ++ M + G +P++ T+NSL+ E
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + G DV +Y ILI IDEA +L + ++ G P Y
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A F ++ G+ P+ Y+ L+ + G +A M
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ D + G + A K+
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKL 498
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ GL G +A ++ KM + G PD+ T+++LI+++CK
Sbjct: 187 MVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRL 246
Query: 61 VEFCVEMY--------------YSVCKLGSCA---------------------DVSTYKI 85
V ++++ Y+ G C+ D+ T+ +
Sbjct: 247 VNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSL 306
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI K G + EA +L + E G P Y ++ G + + +A F + +G
Sbjct: 307 LIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRG 366
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
P+ Y+ LI R EA EM GLTP + + + GK
Sbjct: 367 CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK 421
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + GF V ++ + G G + A ++ ++M ++G P++ T+NSLI+ +CK+GE
Sbjct: 316 IGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGE 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+ ++ + G D+ T IL+ + K+ +D+A L + LVE G P Y
Sbjct: 376 VSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTI 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +A ++ +K P+ Y+ LI R GR A L EM G
Sbjct: 436 LIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKG 495
Query: 181 LTPISRCFDLVTDGL 195
P + + ++ D L
Sbjct: 496 PLPDTITYSILLDAL 510
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ P + L+ G G ++ A+++ + + + G D+ T+N I CK G
Sbjct: 281 MVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGR 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V V ++ +C+ G ++ TY LI + KAG + A+ ++ + G P
Sbjct: 341 VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCI 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A F+++ G P+ YT LI C R EA N L +M
Sbjct: 401 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + DGL G+ A ++
Sbjct: 461 LVPHIVTYSCLIDGLCRSGRISNAWRL 487
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L AG + A ++V M + G PD+ T L++ +CKS
Sbjct: 351 MCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKR 410
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G DV +Y ILI + + EA LL ++ P Y+
Sbjct: 411 LDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSC 470
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ +A+ +E+ +KG P+ Y+ L+ + EA +M + G
Sbjct: 471 LIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRG 530
Query: 181 LTPISRCFDLVTDG 194
L P C+ ++ DG
Sbjct: 531 LEPDVMCYTIMIDG 544
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + V +L+ GL G L A++M ++M+ +G +P++ T +L+ C G
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E++ ++ + G DV TY + I K G + +A R+ + +G P Y
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ A+ + G P+ L+ + R +A ++ E G
Sbjct: 366 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
LTP + ++ G C + E + L
Sbjct: 426 LTPDVWSYTILIHGC--CTSRRMGEAMNLLR 454
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ GL + L+ A + N++++ G PD+ ++ LI C S
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + + TY LI + ++G I A+RLL+ + G P Y+
Sbjct: 446 MGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ +++ D+A F+++ +G P+ YT +I + R EA N EM
Sbjct: 506 LLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKN 565
Query: 181 LTPISRCFDLVT 192
L P D+VT
Sbjct: 566 LVP-----DIVT 572
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G P V +L+ G + + A ++ M + P + T++ LI+ +C+SG
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D TY IL+ A+ K +DEA L + +++ G P Y
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTI 540
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+I G + + D+A F E+ +K P+ YT L + G
Sbjct: 541 MIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++GL G +V++MI++G D + F LI+ +CK+G + EM+ + G
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ T L+ G +D A L + E G Y I G + G+ DA
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +G PN Y +LI + G A + M GLTP ++ DGL
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405
Query: 196 KNCGKHDLA 204
+ D A
Sbjct: 406 CKSKRLDQA 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
+ G++ + + K++K+G D N++++ +C +G V +E + + G +
Sbjct: 82 FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVE------DGH--NPFPSLYAPIIKGAFRRGQF 131
+Y ILI + + G ++EA LL + + DG +Y+ +I R G
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
D+ F F++E+ G PN Y +LI +CG G+F+E + EM GL F +
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGV-GKFLEGFGLVDEMIRRGLDVSVYVFTV 260
Query: 191 VTDGLKNCGKHDLAEKIEQLE 211
+ DGL C L E E +
Sbjct: 261 LIDGL--CKNGMLVEAREMFD 279
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + L+ GL +G + +A +++N+M +G PD T++ L++ + K
Sbjct: 456 MHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQH 515
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V ++ + K G DV Y I+I K+ IDEA L + P Y
Sbjct: 516 LDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTI 575
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ F+ G + F + I+ PP
Sbjct: 576 LFNAVFKSGSNSYEWKFVNVIRDINPPP 603
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 8/188 (4%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ + +++GL G + A + ++++ G + ++ LI +C++G V
Sbjct: 101 RGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNE 160
Query: 64 CVEMYYSVCKLGSC--------ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
V + + K +V Y I+I + + G +DE F + ++ +G P
Sbjct: 161 AVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNE 220
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y +I+G G+F + F E+ +G + V+T LI + G VEA E
Sbjct: 221 FTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDE 280
Query: 176 MTEMGLTP 183
M G P
Sbjct: 281 MVNRGYEP 288
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ L G+++ + N+M+ G P+ T+ SLI +C G+ + + +
Sbjct: 190 IVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRR 249
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V + +LI + K GM+ EA + +V G+ P ++ G +G D A
Sbjct: 250 GLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMA 309
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F I G + Y I + GR +A EM G+ P ++ + D
Sbjct: 310 RELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDC 369
Query: 195 LKNCGKHDLAEKI 207
L G+ A +I
Sbjct: 370 LCKAGEVSGAWEI 382
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETF---------NSLIE 53
+ GF+ +L+ GL G + A ++ +MI++ + + + F + +I+
Sbjct: 135 NNGFSLNEVSYGILINGLCENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVID 193
Query: 54 TICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
+C++G V+ E Y + G C + TY LI + G E F L+ ++ G +
Sbjct: 194 CLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDV 253
Query: 114 FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
++ +I G + G +A F E+ +G+ PN T L+
Sbjct: 254 SVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALM 297
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G++ + L++G G A M +M++ G P + T+ SLI ++CK+G
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + G C + TY L+ S+ G ++EA+R+L + ++G +P Y
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +DA ++K KG P+ Y+T+++ R EA EM E G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P + + + G C + E + E LR
Sbjct: 481 IKPDTITYSSLIQGF--CEQRRTKEACDLYEEMLR 513
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P R LV G GY+ A +++ +M G P + T+N+LI C +G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G DV +Y ++ ++ +DEA R+ +VE G P Y+
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + + +A + E+ G PP+ YT LI G +A EM E G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ +GL + A+++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRL 577
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P + ++++ GL G ++ ++ +M ++G D T+N+LI+ CK G
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M+ + + G V TY LI ++ KAG ++ A L + G P Y
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G ++A+ E+ G P+ Y LI G+ +A L +M E G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P + V G C +D+ E +
Sbjct: 446 LSPDVVSYSTVLSGF--CRSYDVDEAL 470
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P V ++L++G AG ++ A + +KM +G P++ T+N+LI+ CK +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ S+ G ++ +Y ++I + + G + E +L + G++ Y
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G F A +E+ G P+ YT+LI + G A +L +M G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P R + + DG G + A ++
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRV 402
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ G ++ +++ M +G +P+L ++N +I +C+ G
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D TY LI K G +A + ++ G P Y
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G + A F +++++G PN YTTL+ + G EA L EM + G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+P ++ + +G +C + + I LE
Sbjct: 411 FSPSVVTYNALING--HCVTGKMEDAIAVLE 439
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGY-LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
GF P V + ++ + + + A+ + +M++ P++ T+N LI C +G ++
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ + G +V TY LI K ID+ F+LL ++ G P Y +I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ + +E+ +G+ + Y TLI + G F +A EM GLTP
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 184 ISRCFDLVTDGLKNCGKHDLA-EKIEQLEV 212
+ + + G + A E ++Q+ V
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D GF+P V + L+ G G +E A ++ M ++G PD+ ++++++ C+S +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + + G D TY LI + EA L ++ G P Y
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + A +E+ KG P+ Y+ LI + R EA L+++
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V ++ G + ++ A ++ +M+++G PD T++SLI+ C+
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + ++G D TY LI A G +++A +L + +VE G P Y+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I G ++ + +A ++ + P+ Y TLI C
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 56/134 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G G + A Q+ M+ + PD +N +I C++G++ +Y + K G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
T L+ A+ K G ++E ++ +++ +++ R G D
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 136 CFFSEIKIKGHPPN 149
+E+ G PN
Sbjct: 731 DVLAEMAKDGFLPN 744
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 15/198 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIET------ 54
M +KG P V +L+ GL AK+++ K+ + S P T+++LIE
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 55 ---------ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
C G + +++ S+ D + Y I+I +AG I +A+ L
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+V+ G ++K + G+ ++ + L+ + R G
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGN 725
Query: 166 FVEAANYLMEMTEMGLTP 183
+ L EM + G P
Sbjct: 726 MDVVLDVLAEMAKDGFLP 743
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 36/248 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P + +L++ L+ A + N+M+K +PD+ T+ LI +CK+ +
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213
Query: 61 VEFCVEMY--------------YSVCKLGSCA---------------------DVSTYKI 85
+ + ++ YS+ G C D+ TY +
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ K+G +D+AF LL L +DGH Y +I G FR ++++A ++ ++ +
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ +YT +I + GR EA L EMTE GL P + C++ + G + G D AE
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393
Query: 206 KIEQLEVS 213
+ +LE+S
Sbjct: 394 SL-RLEIS 400
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +L+ G+ G + A+ + +M K G P + TFNSLI +CK+ +E +
Sbjct: 406 PNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLL 465
Query: 68 YYSV---------CKLGS----CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+Y + +L D+++ ++++ + ++GMI +A++LL LV+ G P
Sbjct: 466 FYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPD 525
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y +I G + G + AF F E+++KGH P+ Y TLI R GR +A
Sbjct: 526 IRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585
Query: 175 EMTEMGLTPISRCFDLV 191
+M + G P S + +
Sbjct: 586 QMVKKGCVPESSTYKTI 602
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 13/188 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM-----------IKQGSDP--DLET 47
M G P V + L+ GL A LE A+ + +M + QG+D D+ +
Sbjct: 434 MEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
++E +C+SG + ++ + G D+ TY ILI K G I+ AF+L +
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ 553
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
GH P Y +I G +R G+ +DA F ++ KG P Y T++T R
Sbjct: 554 LKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNIS 613
Query: 168 EAANYLME 175
A + M+
Sbjct: 614 LALSVWMK 621
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G N + ++L+ G +GYL+ A ++ + K G + + LI + ++
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E Y + + DV Y I+I +S+ G + EA LL + E G P Y
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG G D+A EI PN Y+ LI + G +A + EM ++G
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P F+ + +GL C + L E
Sbjct: 439 CLPSVVTFNSLINGL--CKANRLEE 461
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 99/220 (45%), Gaps = 13/220 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++++GL G + A ++ +M ++G PD +N+LI+ C G
Sbjct: 329 MLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGY 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K + TY ILI + K G+I++A + + + G P +
Sbjct: 389 LDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNS 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP--------NRPVY--TTLITMCGR---GGRFV 167
+I G + + ++A F +++I P V+ +L M R G +
Sbjct: 449 LINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMIL 508
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+A LM++ + G+ P R ++++ +G G + A K+
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKL 548
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ AG E A + M PDL FN ++ + + + +Y + K
Sbjct: 133 VLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC 192
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
DV TY ILI + K +A L + + G P +Y+ ++ G + + DA
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
FS+++ G + Y L+ + G +A L +T+ G
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG 298
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 84/198 (42%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+DL++ L+ E +++ ++ E F+ LIE ++G E VE + +
Sbjct: 96 QDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMR 155
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
D+ + +++ + + A + + +++ NP Y +I G + +
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA F E+ +G PN+ +Y+ +++ + + +A +M G ++++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275
Query: 193 DGLKNCGKHDLAEKIEQL 210
+G G D A + QL
Sbjct: 276 NGFCKSGYLDDAFTLLQL 293
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 244 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 304 LINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVG 363
Query: 181 LTPISRCFDLVTD 193
L P +R + ++ +
Sbjct: 364 LKPDARTYTMIIN 376
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ + + M+ G PD+ T++ LI +CK +
Sbjct: 149 ITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESK 208
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 209 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 268
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 269 LIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQEN 328
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + G G+ AEK+ E L V L+
Sbjct: 329 IRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLK 365
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE F L ++ G P Y+ +I G + + DDA
Sbjct: 154 LRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDAN 213
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 274 --CKKGDLKQ 281
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 222 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 281
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 282 AHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALIS 341
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + L EM G P
Sbjct: 342 GXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVP 401
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 402 SVVTYNVLMNG 412
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEG 177
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 178 FXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 237
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPD 297
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + +G C + DL E
Sbjct: 298 KITYTTLINGC--CKEGDLDSAFEH 320
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI CK G+
Sbjct: 254 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGD 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + G +A ++L ++ G P Y
Sbjct: 314 LDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTM 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II + G E++ GH P+ Y L+
Sbjct: 374 IINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLM 410
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 59 LIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 118
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGF 178
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 179 XLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 239 CKNGRVDLAMEI 250
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L+SA + +MI++ D + +LI C+ G
Sbjct: 289 MSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGR 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + +LL + DGH P Y
Sbjct: 349 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNV 408
Query: 121 IIKG 124
++ G
Sbjct: 409 LMNG 412
>gi|224576657|gb|ACN57002.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R A M +
Sbjct: 132 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEXALKLWDMMID 191
Query: 179 MGLTPISRCFDLVTDG 194
G+TP + CF ++ G
Sbjct: 192 KGITPTAACFRALSTG 207
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 155
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + L+ GL G + +++ +MI +G P+ N++++++CK G
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGR 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + +G DV +Y ILI G +DE+ +LL +V G P Y+
Sbjct: 416 VLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSA 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DDA + E+ K PN Y ++ GR V A + M++ + G
Sbjct: 476 LLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSG 535
Query: 181 LTPISRCFDLVTDGL 195
+ +++V GL
Sbjct: 536 IQLGINTYNIVLGGL 550
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 53/260 (20%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G+N P V ++++ GL G ++ A + ++M+ QG P++ T+NS+I+ +CK+
Sbjct: 128 MADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKA 187
Query: 59 ----------------GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
G++E V + + G DV TY +LI K G EA +
Sbjct: 188 QAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNI 247
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRG--------------------------------- 129
++V G NP Y ++ G +G
Sbjct: 248 FDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAK 307
Query: 130 --QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
D A F E++ KG PN YTT+I + + GR +A ++ +M GL+P
Sbjct: 308 NETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIIT 367
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
F + GL G+ EK+
Sbjct: 368 FTSLIHGLCTIGEWKKVEKL 387
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V LL+ G A+ + + M+++G +PD T+ +L+ G
Sbjct: 216 MSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGA 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + + ILI A +K +D+A + + G +P Y
Sbjct: 276 LVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTT 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +DA FS++ +G P+ +T+LI G + + EM G
Sbjct: 336 VIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRG 395
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKI 207
+ P + + + D L G+ HD ++I
Sbjct: 396 IHPNAIFLNTIMDSLCKEGRVLEAHDFFDQI 426
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP L+ G G L ++ MI+ G + FN LI K+
Sbjct: 251 MVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNET 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G +V TY +I + KAG +++A +V +G +P +
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G++ E+ +G PN T++ + GR +EA ++ ++ +G
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVG 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + ++ DG GK D + K+ VS+
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSI 464
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++ L+ A +M ++G P++ T+ ++I+ +CK+G VE V + +
Sbjct: 299 NILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ T+ LI + G + +L ++ G +P I+ + G+ +
Sbjct: 359 EGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A FF +I G P+ YT LI G+ E+ L M +GL P + + + +
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478
Query: 194 GLKNCGKHDLA 204
G G+ D A
Sbjct: 479 GYCKNGRVDDA 489
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 86/230 (37%), Gaps = 35/230 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +L+ G G ++ + +++ +M+ G PD T+++L+ CK+G V+
Sbjct: 430 GVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDA 489
Query: 65 V-----------------------------------EMYYSVCKLGSCADVSTYKILIPA 89
+ E Y + G ++TY I++
Sbjct: 490 LALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGG 549
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+ + +DEA R+ L + +I G + G+ DA FS I G P+
Sbjct: 550 LCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPD 609
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+Y +I G E+ + M + G T SR + + L G
Sbjct: 610 AIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKG 659
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P ++++ GL +AG + +A++ K++ G + T+N ++ +C++
Sbjct: 496 MFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSF 555
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + M+ + +V T+ I+I + K G I +A L ++ G P +Y
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGL 615
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I+ G +++ F ++ G N ++ G A YL ++ E
Sbjct: 616 MIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDE 673
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G+ G LE A + +KM++ G P+ T+N+LI+ C G+
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + K G VSTY +L+ A+ G + EA ++ + + G P Y
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF +E+ KG P YT+LI + R R EA + ++ + G
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467
Query: 181 LTPISRCFDLVTDG 194
++P F+ + DG
Sbjct: 468 VSPDVIMFNAMVDG 481
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P V + ++ G + G +E A+++++ M +G +PD T+ SLI +CK G
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + ++G + TY LI G ++ AF +V+ G P S Y
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ F G+ +A E++ KG P+ Y LI R G +A + EM G
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432
Query: 181 LTP 183
+ P
Sbjct: 433 IEP 435
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +LLV L G + A M+ +M K+G PD T+N LI + G
Sbjct: 358 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 417
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G TY LI +S+ + EA L +++ G +P ++
Sbjct: 418 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 477
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G + AF E+ K PP+ + TL+ R G+ EA L EM G
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537
Query: 181 LTPISRCFDLVTDG 194
+ P ++ + G
Sbjct: 538 IKPDHISYNTLISG 551
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++V L G L+ A++ + M G P++ ++N++I G +E + ++
Sbjct: 231 NIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 290
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY LI + K G ++EA L +VE G P Y +I G +G +
Sbjct: 291 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 350
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF + E+ KG P+ Y L+ GR EA + + EM + G+ P + ++++ +
Sbjct: 351 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410
Query: 194 GLKNCG 199
G CG
Sbjct: 411 GYSRCG 416
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G G + A + N+M+ +G +P T+ SLI + +
Sbjct: 393 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G DV + ++ G ++ AF LL + P +
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ ++A E+K +G P+ Y TLI+ GR G +A EM +G
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + L + DLAE++
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEEL 599
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLLV+ + A + M ++G P +ET N ++ K +E +Y + +
Sbjct: 161 DLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFR 220
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
L + V T+ I++ + K G + +A + + G P Y II G RG +
Sbjct: 221 LRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEG 280
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A +++KG P+ Y +LI+ + GR EA+ +M E+GL P + ++ + D
Sbjct: 281 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 340
Query: 194 GLKNCGKHDL 203
G C K DL
Sbjct: 341 GY--CNKGDL 348
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + + ++ L +E A + +M + + TFN ++ +CK G+
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + LG +V +Y +I S G I+ A R+L + G P Y
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++A F ++ G PN Y TLI G A +Y EM + G
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 181 LTPISRCFDLVTDGL 195
+ P ++L+ L
Sbjct: 363 IMPSVSTYNLLVHAL 377
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G N G LE A ++M+K+G P + T+N L+ + G
Sbjct: 323 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 382
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + K G D TY ILI S+ G +AF L + ++ G P Y
Sbjct: 383 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 442
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RR + +A F +I +G P+ ++ ++ G A L EM
Sbjct: 443 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 502
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+ + G GK
Sbjct: 503 VPPDEVTFNTLMQGRCREGK 522
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ L ++ A + K++ QG PD+ FN++++ C +G
Sbjct: 428 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 487
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + D T+ L+ + G ++EA LL + G P Y
Sbjct: 488 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 547
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G RRG DAF E+ G P Y LI + A L EM G
Sbjct: 548 LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 607
Query: 181 LTPISRCFDLVTDGLKN 197
++P + + +G+ N
Sbjct: 608 ISPDDSTYLSLIEGMGN 624
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+G +P V + +V G G +E A ++ +M ++ PD TFN+L++ C+ G+VE
Sbjct: 465 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 524
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + G D +Y LI + G I +AFR+ ++ G NP Y +I
Sbjct: 525 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
K + + D A E+ KG P+ Y +LI G VE
Sbjct: 585 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G G ++ A ++ ++M+ G +P L T+N+LI+ +CK+ E
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
+ E+ + G D STY LI + + E
Sbjct: 593 GDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ G +E A Q++++ +++G PD+ TF ++I +C++G
Sbjct: 228 MVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGR 287
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ +C G ++ TY +L+ + K G ++EAF L + P +Y
Sbjct: 288 PLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTI 347
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D FS + +G PN YT L+ + G +EA +M E G
Sbjct: 348 LIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDG 407
Query: 181 LTPISRCFDLVTDGL 195
TP ++++ G
Sbjct: 408 CTPDKCAYNVIIQGF 422
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G + +L+ + ++ +++K++K G +P + TF +L+ +C G+++
Sbjct: 92 GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ +Y + G +V TY ++I ++SK+G +EA L + + G P Y+ +I G
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
RGQ D+A F + KG PN YT+L+ + R EA L E GL P
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
F + GL G+ A+++
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQL 294
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ G G ++ A+ + + M+ +G P++ T+ SL+ CK
Sbjct: 193 MEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIER 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V++ + G D+ T+ +I + +AG A +L + GH P Y
Sbjct: 253 IEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGV 312
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G ++AF F E++ PN +YT LI + G+ + + + G
Sbjct: 313 LLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEG 372
Query: 181 LTPISRCFDLVTDGLKNCG----KHDLAEKIEQ 209
L P + + L G H L K+E+
Sbjct: 373 LKPNVYTYTALVGALCKEGLIIEAHKLFRKMEE 405
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ GL G ++ + + M+ +G P++ T+N +I ++ KSG+
Sbjct: 127 GLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEA 186
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + K+G +V Y LI G +DEA + +V G P Y ++ G
Sbjct: 187 LGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNG 246
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + ++A E KG P+ +TT+I+ R GR + A + G TP
Sbjct: 247 YCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPN 306
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ ++ DGL C +L E + RS
Sbjct: 307 IMTYGVLLDGL--CKHGNLEEAFALFQEMQRS 336
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++++ L +G A + +M K G P++ +++LI+ C G+
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G +V TY L+ K I+EA +LL + G P +
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G R G+ A F I GH PN Y L+ + G EA EM
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++ D L CGK
Sbjct: 338 VKPNLVIYTILIDSLCKCGK 357
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L ++ G+ E+ + ++ G + D+ + + LI C V+F + + + KLG
Sbjct: 68 LFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLG 127
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ T+ L+ + G +D+ L +++ G P Y II + G+ ++A
Sbjct: 128 LEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEAL 187
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F +++ G PN Y+TLI G+ EA + M G TP + + +G
Sbjct: 188 GFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGY 247
Query: 196 KNCGKHDLAEKIEQLEVSLR 215
C + E ++ L+ +LR
Sbjct: 248 --CKIERIEEAVQLLDETLR 265
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + F+ L +I + G E V + + LG D+ + ILI +D +
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L +++ G P + ++ G G+ D + ++ ++G PN Y +I +
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
G+ EA +L +M ++G P + + DG G+ D A + L VS
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS 230
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + +L+ L G ++ K++ +++I +G P++ T+ +L+ +CK G
Sbjct: 333 MQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGL 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH--------- 111
+ +++ + + G D Y ++I + A +L+ +V G
Sbjct: 393 IIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRAL 452
Query: 112 -NPFPSLYAPIIK 123
N FP+ P +K
Sbjct: 453 LNDFPTNDIPALK 465
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 189 MHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 248
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + AD+ TY LI + K G + +A L+ + G P Y
Sbjct: 249 VDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTT 308
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + VYTTLI+ + GR V+A L EM +G
Sbjct: 309 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVG 368
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 369 LKPDTGTYTMIINEF--CKKGDV 389
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G +PD+ T++ LI +CK +
Sbjct: 154 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESK 213
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ + Y
Sbjct: 214 IDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNT 273
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+++KG P++ YTTLI C + G A + M +
Sbjct: 274 LIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEN 333
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 334 IRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLK 370
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK GE+ ++ ++ K G
Sbjct: 99 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWG 158
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + G P Y+ +I G + + D A
Sbjct: 159 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGAN 218
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ KG PN +TTLI + GR A +M L+ ++ + GL
Sbjct: 219 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGL 278
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 279 --CKKGDLKQ 286
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + +FN+L+ + G+++
Sbjct: 123 GYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 182
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K ID A L +++ G P + +I G
Sbjct: 183 FRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDG 242
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + + Y TLI + G +A N + EM GL P
Sbjct: 243 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPD 302
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 303 KITYTTLIDGC--CKEGDLETAFEH 325
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q DL T+N+LI +CK G+
Sbjct: 224 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGD 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D TY LI K G ++ AF ++++ +Y
Sbjct: 284 LKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTT 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT +I + G + L EM G
Sbjct: 344 LISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 403
Query: 181 LTP 183
P
Sbjct: 404 HVP 406
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G++E E + +
Sbjct: 274 LIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEN 333
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y LI + + G +A ++L ++ G P Y II ++G
Sbjct: 334 IRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGS 393
Query: 136 CFFSEIKIKGHPPN 149
E++ GH P+
Sbjct: 394 KLLKEMQRDGHVPS 407
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 64 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECG 123
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P + ++ G R G D+ F
Sbjct: 124 YPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 183
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMGLTPISRCFDLVTDG 194
S + G P+ Y+ LI + + ++ AN L EM + GL P F + DG
Sbjct: 184 RLKSAMHASGVEPDVYTYSVLINGLCKESK-IDGANELFDEMLDKGLVPNGVTFTTLIDG 242
Query: 195 LKNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 243 HCKNGRVDLAMEI 255
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + + + + AG E + + ++ G PD +++ LI + K+G
Sbjct: 535 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 594
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++Y++ + G D Y +I K+G +++A++LL + GH P Y
Sbjct: 595 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 654
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A+ F E K G N VY++LI G+ GR EA + E+ + G
Sbjct: 655 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 714
Query: 181 LTPISRCFDLVTDGL 195
LTP ++ + D L
Sbjct: 715 LTPNVYTWNCLLDAL 729
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L++ G E ++ +M+ G PDL N+ ++ + K+GE
Sbjct: 500 MLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE 559
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + G D +Y ILI + KAG+ +E + L + + E G Y
Sbjct: 560 TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 619
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A+ E+K+KGHPP Y ++I + R EA E G
Sbjct: 620 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 679
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ + + DG G+ D A
Sbjct: 680 IKLNVVVYSSLIDGFGKVGRIDEA 703
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P R +L+ GL+ AG ++ M +QG D +N++I+ CKSG+V
Sbjct: 574 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 633
Query: 65 VEMYY---------SVCKLGSCAD--------------------------VSTYKILIPA 89
++ +V GS D V Y LI
Sbjct: 634 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 693
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
K G IDEA+ ++ L++ G P + ++ + + ++A F +K PPN
Sbjct: 694 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 753
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+ Y+ LI R +F +A + EM ++GL P + + + GL G
Sbjct: 754 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAG 803
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V L++ G +++A ++++M D D+ +N I+ K+G+
Sbjct: 221 MQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGK 280
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D TY +I + KA +DEA L L ++ P Y
Sbjct: 281 VDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNT 340
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+FD+A+ K KG P+ Y ++T G+ R EA EM
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 400
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++++ D L GK + A +I
Sbjct: 401 V-PNVPTYNILIDMLCREGKLNAALEI 426
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ L G L +A ++ + M + G P++ T N +I+ +CK+ ++E +
Sbjct: 402 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 461
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + T+ LI + K G +D+A+ L +++ GH P +Y +I+ F+
Sbjct: 462 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 521
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +D + E+ G P+ + T + + G + E+ G P +R
Sbjct: 522 CGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARS 581
Query: 188 FDLVTDGLKNCG 199
+ ++ GL G
Sbjct: 582 YSILIHGLVKAG 593
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L +E A ++ +M K+ + P++ T+N LI+ +C+ G++
Sbjct: 364 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNA 422
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E+ + + G +V T I+I + KA ++EA + + + P ++ +I
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 482
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DDA+ + ++ GH P VYT+LI + GR + EM G +P
Sbjct: 483 GLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP 542
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++++ L A LE A + M + P+ TF+SLI+ + K G
Sbjct: 430 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 489
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +Y + G Y LI + K G ++ ++ +V G +P +L
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F EI G P+ Y+ LI + G E M E G
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLEV 212
+ ++ V DG GK + A + +E+++V
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKV 642
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P LV + + L A ++ M K P + LI + + E
Sbjct: 151 MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVRE 210
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + +LG +V + LI ++ G +D A LL + + + LY
Sbjct: 211 PDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNV 270
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D ++ FF E+K G P+ YT++I + + R EA ++ +
Sbjct: 271 CIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNR 330
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ + G + GK D A
Sbjct: 331 KVPCAYAYNTMIMGYGSAGKFDEA 354
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +++++G P++ T+N L++ + K+ E+ + + S+ L
Sbjct: 690 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 749
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + + ++AF + + G P Y +I G + G +A
Sbjct: 750 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 809
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
FS K G P+ Y +I + ++A
Sbjct: 810 GLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 843
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 71/178 (39%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +L+ L + + ++M + G + ++ F +LI + G V+ +
Sbjct: 191 FRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAAL 250
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + AD+ Y + I KAG +D +++ H + G P Y +I
Sbjct: 251 SLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVL 310
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + D+A F +++ P Y T+I G G+F EA L G P
Sbjct: 311 CKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 368
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG P V + L+ L+ A + A M P+ T++ LI +C+ +
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + KLG + TY +I ++KAG I EA L +G P + Y
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G + DA+ F E ++KG
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKG 854
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 1/183 (0%)
Query: 30 KQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPA 89
++++ +M G P L+ KS ++ ++ ++ K S Y ILI A
Sbjct: 145 ERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGA 204
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+S+ D L H + E G+ L+ +I+ R G+ D A E+K +
Sbjct: 205 LSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDAD 264
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA-EKIE 208
+Y I G+ G+ + + EM GL P + + L + D A E E
Sbjct: 265 IVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFE 324
Query: 209 QLE 211
QLE
Sbjct: 325 QLE 327
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++ G G E A +M +M +G PD+ ++NS ++++CK G
Sbjct: 177 MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGR 236
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++YS+ G ++ TY IL+ + G + + + DG ++
Sbjct: 237 SKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTI 296
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG D+A SE++ +G P+ Y+TLI+ R GR +A + +M G
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + + + G C DL + E
Sbjct: 357 VQPNTVVYHSLIQGF--CTHGDLVKAKE 382
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M G P L+QG G L AK++V +M+ G P++ FNS++ +ICK G
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V ++ V +G +D+ + LI G + +AF +L ++ G P Y
Sbjct: 412 RVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G F+ G+ DD F E+ K P Y ++ R GR V A L EM
Sbjct: 472 TLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGC 531
Query: 180 GLTPISRCFDLVTDGL--KNC 198
G T ++++ GL NC
Sbjct: 532 GTTVSLPTYNIILKGLCRNNC 552
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P V + ++ L A +++A+ ++ +M+ G P+ T+ S+I G
Sbjct: 142 MMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGR 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +M+ + G D+ ++ + ++ K G EA + +++ GH P Y
Sbjct: 202 WEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGI 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G F D FF+ +K G N V+T LI + G EA L EM G
Sbjct: 262 LLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
L+P + + L G+ D +K Q+
Sbjct: 322 LSPDVFTYSTLISALCRMGRLADAVDKFNQM 352
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V L+ L G L A N+MI G P+ ++SLI+ C G+
Sbjct: 317 MQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGD 376
Query: 61 VEFCVEMYYSVCKLG-SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ E+ Y + G +++ + ++ ++ K G + +A + + + G ++
Sbjct: 377 LVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFN 436
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G G+ AF + G P+ Y TL+ + GR + N EM++
Sbjct: 437 TLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++++ DGL G+ A+K+
Sbjct: 497 KIKPTTVTYNIILDGLFRAGRTVAAQKM 524
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 84/173 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MSDK P ++++ GL AG +A++M+++MI G+ L T+N +++ +C++
Sbjct: 493 MSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNC 552
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ +C + +++T +I ++ +EA L + + G P S Y
Sbjct: 553 TDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGI 612
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+I+ + G ++A FS ++ G P + I G V+A NY+
Sbjct: 613 MIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYM 665
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKS 58
M++ G P ++++ L + + A ++ M K+ PD+ T+N++I K
Sbjct: 70 MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKE 129
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G++ +Y+ + + G DV T+ +I A+ KA +D A LL +V++G P Y
Sbjct: 130 GKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTY 189
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G G++++A F E+ +G P+ + + + + GR EAA M
Sbjct: 190 TSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAA 249
Query: 179 MGLTPISRCFDLVTDGL 195
G P ++VT G+
Sbjct: 250 KGHRP-----NIVTYGI 261
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL-GSCA-DVSTYK 84
++ K ++ +M + G PD ++ +++ +C + +++ + K G C+ DV TY
Sbjct: 61 DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+I K G I +A L H +++ G P + II + D+A ++
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G PPN+ YT++I GR+ EA EMT GL P ++ D L G+ A
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEA 240
Query: 205 EKI 207
+I
Sbjct: 241 AEI 243
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 74/189 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + LV G +G ++ + +M + P T+N +++ + ++G
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + + G+ + TY I++ + + DEA + L +
Sbjct: 518 TVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNT 577
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + ++A FS I G PN Y +I + G EA N M + G
Sbjct: 578 MINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637
Query: 181 LTPISRCFD 189
P SR +
Sbjct: 638 CAPCSRLLN 646
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +LV G A ++ AKQ+ ++M +G PD ++N+LI +C++
Sbjct: 362 MISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARR 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++ + G ++ TY IL+ +SK G +D+A L + G P Y
Sbjct: 422 PLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNI 481
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+F DA F+E+ +KG PN V T I +GG EA +M +
Sbjct: 482 MIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDD 541
Query: 181 LTPISRCFD 189
+P C +
Sbjct: 542 CSPAQGCIN 550
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 1/206 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L+ + G + A+ ++ M + G +PD+ T+N+L+ C EV ++
Sbjct: 299 PDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKV 358
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV ++ IL+ KA IDEA +L + G P Y +I G +
Sbjct: 359 FEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQ 418
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ +A F ++ G+PPN Y+ L+ + G +A M GL P
Sbjct: 419 ARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVT 478
Query: 188 FDLVTDGLKNCGK-HDLAEKIEQLEV 212
++++ DG+ GK D E +L V
Sbjct: 479 YNIMIDGMCKYGKFKDARELFAELSV 504
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ GL N G + A ++N+M PDL F+ LI+ +CK GE
Sbjct: 257 MKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGE 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ ++G DV+TY L+ + EA ++ ++ G P ++
Sbjct: 317 VSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSI 376
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D+A F E+ +G P+ Y TLI+ + R +EA +M G
Sbjct: 377 LVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNG 436
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ D L G D A
Sbjct: 437 YPPNLVTYSILLDCLSKQGYLDQA 460
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 2/210 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V L+ G G + A ++ + M+ +G P++ +++ +I+ +C+ G+
Sbjct: 156 GLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEV 215
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + +G DV Y ++ + K +++EA + + G P Y +I G
Sbjct: 216 IKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHG 275
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G++ +AF +E+K P+ ++ LI + + G EA L MTEMG+ P
Sbjct: 276 LRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPD 335
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
++ + +G C + ++ E + EV +
Sbjct: 336 VATYNTLMNGY--CLRMEVVEARKVFEVMI 363
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V + L+ G + A+++ MI +G PD+ +F+ L+ CK+
Sbjct: 327 MTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKR 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G D +Y LI + +A EA L ++ +G+ P Y+
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++G D A F ++ G P+ Y +I + G+F +A E++ G
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK-IEQLE 211
L P + DG+ G D A K Q+E
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + V +L+ +++ ++ K+IK G +P++ TF++LI C G+
Sbjct: 117 MEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGK 176
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + G +V +Y I+I + + G E +LL ++ G P +Y
Sbjct: 177 IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNT 236
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + ++A F ++K G P YT+LI GR+ EA L EM
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296
Query: 181 LTPISRCFDLVTD 193
+ P F ++ D
Sbjct: 297 IMPDLVAFSVLID 309
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P V ++++GL G +++ M G +PD+ +N++++ +CK
Sbjct: 187 MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V V ++ + G V TY LI + G EAF LL+ + G N P L +
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM--KGGNIMPDLVAF 304
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +I + G+ +A + G P+ Y TL+ VEA M
Sbjct: 305 SVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS 364
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P F ++ +G + D A+++
Sbjct: 365 KGRMPDVFSFSILVNGYCKAKRIDEAKQL 393
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L L+ + ++ + +M G D+ + LI C+ V++ + + KLG
Sbjct: 97 LFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLG 156
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T+ LI G I A L +V G+ P Y+ IIKG R G+ +
Sbjct: 157 LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVI 216
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+K+ G P+ +Y T++ + EA + +M G+ P + + GL
Sbjct: 217 KLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276
Query: 196 KNCGK 200
+N G+
Sbjct: 277 RNLGR 281
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 185 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 244
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 245 VDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTA 304
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 305 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 364
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 365 LKPDARTYTMIINEF--CKKGDVWK 387
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK ++ ++ ++ K G
Sbjct: 95 VLEHLMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWG 154
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL + G P Y+ +I G + + DDA
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 214
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 215 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGL 274
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 275 --CKKGDLKQ 282
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 150 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 209
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 210 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNT 269
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YT LI C + G A + M +
Sbjct: 270 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQEN 329
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 330 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 366
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A+ + + + K G P + ++N+L+ + G+++ + ++ G DV TY +LI
Sbjct: 143 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 202
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ K +D+A L ++ G P + +I G + G+ D A + ++ + P
Sbjct: 203 GLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLP 262
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ Y TLI + G +A + + EM+ GL P + + DG C + DL E
Sbjct: 263 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGC--CKEGDLDTAFE 320
Query: 209 Q 209
Sbjct: 321 H 321
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 74/192 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 60 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESG 119
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K I A + + + G P Y ++ G R G D+ F
Sbjct: 120 YPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 179
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 180 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 239
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 240 CKNGRVDLALEI 251
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 290 MSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
+M + +G D TY ++I K G + + +LL
Sbjct: 350 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 392
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 1/198 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ G ++ A + +M +QG PD T+N+LI +C G
Sbjct: 325 MVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR 384
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D+ TY+IL + K + EA LL + +P +Y+
Sbjct: 385 LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 444
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + A FS++ KG P+ YT +I + G EA+ EM E G
Sbjct: 445 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG 504
Query: 181 LTPISRCFDLVTDG-LKN 197
+P + ++L+T G L+N
Sbjct: 505 CSPNACTYNLITRGFLRN 522
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV L G + A +V+ MI+ PD+ T+NSL++ C E+ V ++ ++ + G
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y LI K ++D+A L + + G P Y +I G G+ DA
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ + G P+ Y L + R EA L + L P + +V DG+
Sbjct: 390 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 449
Query: 196 KNCGKHDLAEKI 207
G+ + A +
Sbjct: 450 CRAGELEAARDL 461
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P L++GL G + A Q+ +KM +G PD+ T+ +LI +CK G
Sbjct: 119 GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTA 178
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ S+ + V Y +I ++ K + EA L +++ G +P Y+ +I G
Sbjct: 179 IRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHG 238
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G + +A F + + P++ + TL+ + G V+A + M + L P
Sbjct: 239 LCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPD 298
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
++ + DG +C + ++ + + + +R
Sbjct: 299 VVTYNSLMDG--HCLRSEMGKTVNVFDTMVR 327
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + L A ++ ++K G P TF +LI +C G++ ++++ +
Sbjct: 93 NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY LI + K G A R L ++ + P +Y+ II + Q +
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE 212
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A FS++ KG PN Y++LI G + EA M + P F+ + D
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272
Query: 194 GL 195
L
Sbjct: 273 AL 274
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 5/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P + L+ GL + G L A + ++M+ G PDL T+ L + +CK+
Sbjct: 360 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + D+ Y I++ + +AG ++ A L L G +P Y
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F E+ G PN Y + R + A EM G
Sbjct: 480 MINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539
Query: 181 LT-PISRCFDLVT----DGLKNCGKHDLAEKIE 208
+ +S LV DGL K L E ++
Sbjct: 540 FSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ L L A + + M+ +G P+ T++SLI +C G
Sbjct: 185 MEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH 244
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++Y++ D T+ L+ A+ K GM+ +A ++ +++ P Y
Sbjct: 245 WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS 304
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + F + KG P+ YTTLI + +A EM++ G
Sbjct: 305 LMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQG 364
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + ++ + GL + G+
Sbjct: 365 LIPDTVTYNTLIHGLCHVGR 384
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 2/188 (1%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
LN ++ A + N+M++ P + F+ L+ +I + + +Y + G +
Sbjct: 30 LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T ILI + + AF +L ++++ G+ P + + +I+G G+ +A F +
Sbjct: 90 YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ +G P+ Y TLI + G A +L M + P + + D L C
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSL--CKD 207
Query: 201 HDLAEKIE 208
L E +
Sbjct: 208 RQLTEALS 215
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 75/188 (39%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + L+ + + + + +M G + T N LI + C + F +
Sbjct: 52 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ KLG +T+ LI + G I EA +L + +G P Y +I G +
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G A F ++ + P VY+T+I + + EA + +M G++P +
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 188 FDLVTDGL 195
+ + GL
Sbjct: 232 YSSLIHGL 239
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + + + + AG E + + ++ G PD +++ LI + K+G
Sbjct: 290 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++Y++ + G D Y +I K+G +++A++LL + GH P Y
Sbjct: 350 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A+ F E K G N VY++LI G+ GR EA + E+ + G
Sbjct: 410 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 469
Query: 181 LTPISRCFDLVTDGL 195
LTP ++ + D L
Sbjct: 470 LTPNVYTWNCLLDAL 484
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L++ G E ++ +M+ G PDL N+ ++ + K+GE
Sbjct: 255 MLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + G D +Y ILI + KAG+ +E + L + + E G Y
Sbjct: 315 TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A+ E+K+KGHPP Y ++I + R EA E G
Sbjct: 375 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 434
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ + + DG G+ D A
Sbjct: 435 IKLNVVVYSSLIDGFGKVGRIDEA 458
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P R +L+ GL+ AG ++ M +QG D +N++I+ CKSG+V
Sbjct: 329 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 388
Query: 65 VEMYY---------SVCKLGSCAD--------------------------VSTYKILIPA 89
++ +V GS D V Y LI
Sbjct: 389 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 448
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
K G IDEA+ ++ L++ G P + ++ + + ++A F +K PPN
Sbjct: 449 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 508
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+ Y+ LI R +F +A + EM ++GL P + + + GL G
Sbjct: 509 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAG 558
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ L G L +A ++ + M + G P++ T N +I+ +CK+ ++E +
Sbjct: 157 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 216
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + T+ LI + K G +D+A+ L +++ GH P +Y +I+ F+
Sbjct: 217 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 276
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +D + E+ G P+ + T + + G + E+ G P +R
Sbjct: 277 CGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARS 336
Query: 188 FDLVTDGLKNCG 199
+ ++ GL G
Sbjct: 337 YSILIHGLVKAG 348
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L +E A ++ +M K+ + P++ T+N LI+ +C+ G++
Sbjct: 119 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNA 177
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E+ + + G +V T I+I + KA ++EA + + + P ++ +I
Sbjct: 178 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 237
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DDA+ + ++ GH P VYT+LI + GR + EM G +P
Sbjct: 238 GLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP 297
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++++ L A LE A + M + P+ TF+SLI+ + K G
Sbjct: 185 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 244
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +Y + G Y LI + K G ++ ++ +V G +P +L
Sbjct: 245 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 304
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F EI G P+ Y+ LI + G E M E G
Sbjct: 305 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 364
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLEV 212
+ ++ V DG GK + A + +E+++V
Sbjct: 365 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKV 397
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +++++G P++ T+N L++ + K+ E+ + + S+ L
Sbjct: 445 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 504
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + + ++AF + + G P Y +I G + G +A
Sbjct: 505 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 564
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FS K G P+ Y +I + ++A E G ++ ++ D L
Sbjct: 565 GLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 624
Query: 196 KNCGKHDLAEKIEQLEV 212
AE +EQ +
Sbjct: 625 HK------AECLEQAAI 635
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG P V + L+ L+ A + A M P+ T++ LI +C+ +
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 524
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + KLG + TY +I ++KAG I EA L +G P + Y
Sbjct: 525 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 584
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G + DA+ F E ++KG
Sbjct: 585 MIEGLSSANKAMDAYALFEETRLKG 609
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 86/249 (34%), Gaps = 46/249 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
MS GF P LV + + L A ++ M K P + LI
Sbjct: 1 MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60
Query: 53 --ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
+CK+ ++ VE++ + + Y +I AG DEA+ LL G
Sbjct: 61 FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120
Query: 111 HNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
P Y I+ ++ + ++A F E+K + PN P Y LI M R G+ A
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAAL 179
Query: 171 NYLMEMTEMGL-----------------------------------TPISRCFDLVTDGL 195
+M GL TP + F + DGL
Sbjct: 180 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 239
Query: 196 KNCGKHDLA 204
CG+ D A
Sbjct: 240 GKCGRVDDA 248
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 81 STYKILIPAVS----------KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
S Y ILI V KA +DEA L L ++ P Y +I G G+
Sbjct: 46 SAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGK 105
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
FD+A+ K KG P+ Y ++T G+ R EA EM + P +++
Sbjct: 106 FDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNI 164
Query: 191 VTDGLKNCGKHDLAEKI 207
+ D L GK + A +I
Sbjct: 165 LIDMLCREGKLNAALEI 181
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G+ G LE A + +KM++ G P+ T+N+LI+ C G+
Sbjct: 310 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 369
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + K G VSTY +L+ A+ G + EA ++ + + G P Y
Sbjct: 370 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 429
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF +E+ KG P YT+LI + R R EA + ++ + G
Sbjct: 430 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489
Query: 181 LTPISRCFDLVTDG 194
++P F+ + DG
Sbjct: 490 VSPDVIMFNAMVDG 503
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P V + ++ G + G +E A+++++ M +G +PD T+ SLI +CK G
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + ++G + TY LI G ++ AF +V+ G P S Y
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ F G+ +A E++ KG P+ Y LI R G +A + EM G
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454
Query: 181 LTP 183
+ P
Sbjct: 455 IEP 457
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +LLV L G + A M+ +M K+G PD T+N LI + G
Sbjct: 380 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 439
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G TY LI +S+ + EA L +++ G +P ++
Sbjct: 440 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 499
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G + AF E+ K PP+ + TL+ R G+ EA L EM G
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559
Query: 181 LTPISRCFDLVTDG 194
+ P ++ + G
Sbjct: 560 IKPDHISYNTLISG 573
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++V L G L+ A++ + M G P++ ++N++I G +E + ++
Sbjct: 253 NIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 312
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY LI + K G ++EA L +VE G P Y +I G +G +
Sbjct: 313 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 372
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF + E+ KG P+ Y L+ GR EA + + EM + G+ P + ++++ +
Sbjct: 373 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432
Query: 194 GLKNCG 199
G CG
Sbjct: 433 GYSRCG 438
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G G + A + N+M+ +G +P T+ SLI + +
Sbjct: 415 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G DV + ++ G ++ AF LL + P +
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ ++A E+K +G P+ Y TLI+ GR G +A EM +G
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + L + DLAE++
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEEL 621
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLLV+ + A + M ++G P +ET N ++ K +E +Y + +
Sbjct: 183 DLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFR 242
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
L + V T+ I++ + K G + +A + + G P Y II G RG +
Sbjct: 243 LRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEG 302
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A +++KG P+ Y +LI+ + GR EA+ +M E+GL P + ++ + D
Sbjct: 303 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 362
Query: 194 GLKNCGKHDL 203
G C K DL
Sbjct: 363 GY--CNKGDL 370
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + + ++ L +E A + +M + + TFN ++ +CK G+
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + LG +V +Y +I S G I+ A R+L + G P Y
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++A F ++ G PN Y TLI G A +Y EM + G
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 181 LTPISRCFDLVTDGL 195
+ P ++L+ L
Sbjct: 385 IMPSVSTYNLLVHAL 399
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G N G LE A ++M+K+G P + T+N L+ + G
Sbjct: 345 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 404
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + K G D TY ILI S+ G +AF L + ++ G P Y
Sbjct: 405 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 464
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RR + +A F +I +G P+ ++ ++ G A L EM
Sbjct: 465 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 524
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+ + G GK
Sbjct: 525 VPPDEVTFNTLMQGRCREGK 544
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ L ++ A + K++ QG PD+ FN++++ C +G
Sbjct: 450 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 509
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + D T+ L+ + G ++EA LL + G P Y
Sbjct: 510 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 569
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G RRG DAF E+ G P Y LI + A L EM G
Sbjct: 570 LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 629
Query: 181 LTPISRCFDLVTDGLKN 197
++P + + +G+ N
Sbjct: 630 ISPDDSTYLSLIEGMGN 646
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+G +P V + +V G G +E A ++ +M ++ PD TFN+L++ C+ G+VE
Sbjct: 487 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 546
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + G D +Y LI + G I +AFR+ ++ G NP Y +I
Sbjct: 547 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
K + + D A E+ KG P+ Y +LI G VE
Sbjct: 607 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G G ++ A ++ ++M+ G +P L T+N+LI+ +CK+ E
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 614
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
+ E+ + G D STY LI + + E
Sbjct: 615 GDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + ++L+ G L A + N+M K+ PD+E++ L++ +C+ +V
Sbjct: 148 GVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRA 207
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V++ + G D +Y L+ ++ + + EA++LL + G NP Y +I G
Sbjct: 208 VDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILG 267
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ DA ++ G PN Y TL++ G + EA NY+ EM G +P
Sbjct: 268 FCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPH 327
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
F + +G N GK L E E L LR
Sbjct: 328 FSVFHALINGFCNVGK--LEEACEVLXEMLR 356
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 8 PPVRGRDLLVQGLL-NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P + + L+Q L+ + Y+ A + + G PD +++N L+ C +G++
Sbjct: 115 PLPKHLNXLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYT 174
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + K DV +Y+IL+ + + ++ A LL +++ G+ P Y ++
Sbjct: 175 LFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLC 234
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
R+ + +A+ +K+KG P+ Y T+I R GR ++A L +M G +P
Sbjct: 235 RKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLM 294
Query: 187 CFDLVTDGLKNCGKHDLAE 205
+ + GL + G +D A+
Sbjct: 295 SYGTLVSGLCDQGLYDEAK 313
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +L+QGL + A ++ M+ +G PD ++ +L+ ++C+ +
Sbjct: 179 MFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKK 238
Query: 61 VEFCVEMYYSVCKL---GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ E Y +C++ G D+ Y +I + G +A ++L ++ +G +P
Sbjct: 239 LK---EAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMS 295
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y ++ G +G +D+A + E+ KG P+ V+ LI G+ EA L EM
Sbjct: 296 YGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEML 355
Query: 178 EMG 180
G
Sbjct: 356 RHG 358
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 82/186 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+ P L+ L L+ A +++ +M +G +PD+ +N++I C+ G
Sbjct: 214 MLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGR 273
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G ++ +Y L+ + G+ DEA + ++ G +P S++
Sbjct: 274 XLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHA 333
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ ++A E+ G + + +I + V N E ++
Sbjct: 334 LINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLKLE 393
Query: 181 LTPISR 186
+TP +R
Sbjct: 394 ITPNTR 399
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V +L+ GL ++ A ++ ++M+++G P+ TF +LI+ CK+G
Sbjct: 203 MHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGW 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 383 LKPDTRTYTMIINEF--CKKGDVWK 405
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNA 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ + G P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L+ G G+++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 238 MLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGD 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G +D AF ++++ Y
Sbjct: 298 LKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTA 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT +I + G + + L EM G
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Query: 181 LTPISRCFDLVTDG 194
P ++++ +G
Sbjct: 418 HVPSVVTYNVLMNG 431
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL + G +P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ KG PN +TTLI + G A +M L P ++ + GL
Sbjct: 233 KLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A +L ++E G P + +I G
Sbjct: 197 FRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G D A + ++ + P+ Y LI + G +A + + EM+ GL P
Sbjct: 257 HCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ + DG C + DL E ++ ++
Sbjct: 317 KITYTTLIDGC--CKEGDLDTAFEHRKMMIQ 345
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G+L A + +T ++E + K + Y + + G
Sbjct: 78 LITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM E GL P S F + DG
Sbjct: 198 RLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G DLA +I + +S
Sbjct: 258 CKNGWVDLAMEIYKQMLS 275
>gi|357129672|ref|XP_003566485.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 564
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIET-ICKSGEVEFCVE 66
P V + LV L AG + A ++M+ G P++ + N L++ +S + +
Sbjct: 111 PNVLCYNTLVNSLAEAGRVAEAHDAFDEMLAAGVAPNVSSLNILVKLHSWRSSRFDLAYK 170
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ +LG ADV TY L+ + + G EA+ +L ++E+G P Y PI++G
Sbjct: 171 EILRMRELGVEADVGTYSTLVTGLCRVGRTGEAWGVLEWMLEEGCYPMVQTYTPIVQGYC 230
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G+ ++A + ++ G PPN Y LI RF E L E TP +
Sbjct: 231 HEGRVEEAMEVMATMERAGCPPNVVTYNVLIRALCDAARFDEVKQVLAESRSKDWTPSTV 290
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
++ +GL C K E +EQL V L
Sbjct: 291 TYNTFMNGL--CKKGMAKEALEQLNVML 316
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V+ +VQG + G +E A +++ M + G P++ T+N LI +C +
Sbjct: 210 MLEEGCYPMVQTYTPIVQGYCHEGRVEEAMEVMATMERAGCPPNVVTYNVLIRALCDAAR 269
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ TY + + K GM EA L+ ++ +G +P +
Sbjct: 270 FDEVKQVLAESRSKDWTPSTVTYNTFMNGLCKKGMAKEALEQLNVMLGEGLDPSDFTLSI 329
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ + DA +K + T + +CG G ++ L +M +
Sbjct: 330 LLNCLCHDSRVSDAIDLLERSTSLKWYAGVVGYNTVMSRLCGMGN-WMGVLKLLTDMVKK 388
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+TP +R F++ L GK +A+ +
Sbjct: 389 GITPNTRTFNVFIRSLCFGGKLSIAKSL 416
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 5/180 (2%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V G + ++ L G +++ M+K+G P+ TFN I ++C G++ + +
Sbjct: 359 VVGYNTVMSRLCGMGNWMGVLKLLTDMVKKGITPNTRTFNVFIRSLCFGGKLSIAKSLLH 418
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
S G A++ TY LI + E L+ ++ + P Y II G R
Sbjct: 419 SQ---GFVANIVTYNTLIYWFYYYKKLSEVQHLISDMAVEKIAPDEVTYTVIIDGLCRDE 475
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+FD A F E +G +R + LI G+ E M G P + FD
Sbjct: 476 KFDMATSCFLESLERGL--SRDLLAVLINRLAHSGKIWEIFRVFQGMEREGFLPDNCIFD 533
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 7/216 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQ-GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M G P V ++LV+ + + A + + +M + G + D+ T+++L+ +C+ G
Sbjct: 139 MLAAGVAPNVSSLNILVKLHSWRSSRFDLAYKEILRMRELGVEADVGTYSTLVTGLCRVG 198
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ + + G V TY ++ G ++EA ++ + G P Y
Sbjct: 199 RTGEAWGVLEWMLEEGCYPMVQTYTPIVQGYCHEGRVEEAMEVMATMERAGCPPNVVTYN 258
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ +FD+ +E + K P+ Y T + + G EA L M
Sbjct: 259 VLIRALCDAARFDEVKQVLAESRSKDWTPSTVTYNTFMNGLCKKGMAKEALEQLNVMLGE 318
Query: 180 GLTPISRCFDLVTDGLKNCGKHD--LAEKIEQLEVS 213
GL P D L NC HD +++ I+ LE S
Sbjct: 319 GLDP----SDFTLSILLNCLCHDSRVSDAIDLLERS 350
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 5/213 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K + P + + GL G + A + +N M+ +G DP T + L+ +C V
Sbjct: 283 KDWTPSTVTYNTFMNGLCKKGMAKEALEQLNVMLGEGLDPSDFTLSILLNCLCHDSRVSD 342
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ L A V Y ++ + G +LL ++V+ G P + I+
Sbjct: 343 AIDLLERSTSLKWYAGVVGYNTVMSRLCGMGNWMGVLKLLTDMVKKGITPNTRTFNVFIR 402
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ A S + +G N Y TLI + E + + +M + P
Sbjct: 403 SLCFGGKLSIAK---SLLHSQGFVANIVTYNTLIYWFYYYKKLSEVQHLISDMAVEKIAP 459
Query: 184 ISRCFDLVTDGLKNCGKHDLAEK--IEQLEVSL 214
+ ++ DGL K D+A +E LE L
Sbjct: 460 DEVTYTVIIDGLCRDEKFDMATSCFLESLERGL 492
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGH------PPNRPVYTTLITMCGRGGRFVEAANYLME 175
+K R G D F+EI+ G PPN Y TL+ GR EA + E
Sbjct: 79 MKALARAGDIDQVLALFAEIRTSGQGQGCTTPPNVLCYNTLVNSLAEAGRVAEAHDAFDE 138
Query: 176 MTEMGLTP-ISRCFDLVTDGLKNCGKHDLAEK 206
M G+ P +S LV + DLA K
Sbjct: 139 MLAAGVAPNVSSLNILVKLHSWRSSRFDLAYK 170
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P V ++L+ L G +E A +++ +M + G P+ ++N L+ CK +
Sbjct: 297 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKK 356
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + G D+ +Y L+ A+ + G +D A LLH L + G +P Y
Sbjct: 357 IHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNT 416
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A E+ KG P+ Y+T+ + R R EA ++ +MG
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG 476
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + ++ + GL C + + I+
Sbjct: 477 IRPTAALYNAILLGL--CKRRETHNAID 502
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D P + L++GL G +A ++ M ++G PD+ T+ L+E CK
Sbjct: 157 VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSG 216
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY +++ + + G +++A L NL G P Y
Sbjct: 217 YKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNI 276
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG F +++DA E+ KG PPN + LI+ R G A L +M + G
Sbjct: 277 VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG 336
Query: 181 LTPISRCFD 189
TP S ++
Sbjct: 337 CTPNSLSYN 345
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ + A + V M+ +G PD+ ++N+L+ +C++GE
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGE 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G + +Y +I ++KAG EA LL + G P Y+
Sbjct: 392 VDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYST 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT-LITMCGRGGRFVEAANYLMEMTEM 179
I G R + ++A F +++ G P +Y L+ +C R A + M
Sbjct: 452 IASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETH-NAIDLFAYMISS 510
Query: 180 GLTPISRCFDLVTDGL 195
G P + ++ +GL
Sbjct: 511 GCMPNESTYTILVEGL 526
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 94/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++++ G+ G +E A + + + G +P+ ++N +++ + +
Sbjct: 227 MHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAER 286
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + G +V T+ +LI + + G+++ A +L + + G P Y P
Sbjct: 287 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNP 346
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + A F + +G P+ Y TL+T R G A L ++ + G
Sbjct: 347 LLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKG 406
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+P+ ++ V DGL GK
Sbjct: 407 CSPVLISYNTVIDGLTKAGK 426
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + +V G AG L++A+++V M +PD T+N+LI +C G + +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV TY IL+ A K +A +LL + + G P Y ++ G +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +DA F + G PN Y ++ R+ +A + EM G P
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLE 211
F+++ L C + + +E LE
Sbjct: 309 FNMLISFL--CRRGLVEPAMEVLE 330
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G ++ A ++++++ +G P L ++N++I+ + K+G+
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGK 426
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G D+ TY + + + I+EA R + + G P +LY
Sbjct: 427 TKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNA 486
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G +R + +A F+ + G PN YT L+ G EA ++ G
Sbjct: 487 ILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
Query: 181 L 181
+
Sbjct: 547 V 547
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + +LL+ G L A +++ +M +G +P+ T+N+ + +CK G+
Sbjct: 71 MRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ ++ + DV Y LI + +AG + EA+ LL + G P P Y
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 121 IIK-----------------------------------GAFRRGQFDDAFCFFSEIKIKG 145
I+ G R + DDA ++K G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
P +Y TLI R GR EA L EM GL+P SR + L+
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P V +LV GL A L A ++V M ++G P+ FN +++ +CK G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +G + TY +LI K + A +L + GH P Y
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + G+ DDA F + K + YTTLI + G+ EA + L EM G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P C++ + L + + A K+
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKL 207
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + +++GL +A E A++++ +M D TFN L++ C++G
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E+ + + G DV TY +I K G+IDEA LL ++ G P Y
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTI 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG ++ DA S++ +G PN + T+I + G +A L +M G
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG 500
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+P + V DGL GK D E +E L V
Sbjct: 501 CSPDLISYSTVIDGLGKAGKTD--EALELLNV 530
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P ++++GL +A A+ ++++MI+QG P+ TFN++I +CK G
Sbjct: 426 MAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG DEA LL+ +V G +P +Y+
Sbjct: 486 VEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEM 179
I + G+ + F I+ + +Y +I ++C RGG A +L M
Sbjct: 546 IASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD-RAIEFLAYMVSS 604
Query: 180 GLTPISRCFDLVTDGLKNCG 199
G P + ++ GL + G
Sbjct: 605 GCMPNESTYTILIRGLASEG 624
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 10/215 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P +R ++ G+ G+LE A +++++M G P++ +N++++ +C +
Sbjct: 286 MVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345
Query: 61 V----EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
E EM+ + C L D T+ IL+ + G++ LL ++E G P
Sbjct: 346 WEQAEELLAEMFDNDCPL----DDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVI 401
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +I G + G D+A + G PN YT ++ R+V+A + + +M
Sbjct: 402 TYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQM 461
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
E G +P F+ V + L C K + + IE L+
Sbjct: 462 IEQGCSPNPVTFNTVINFL--CKKGLVEQAIELLK 494
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 88/187 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G + +++ +M++ G PD+ T+ ++I CK G ++ V + S+
Sbjct: 369 NILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAA 428
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + A +A L+ ++E G +P P + +I ++G +
Sbjct: 429 CGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQ 488
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ + G P+ Y+T+I G+ G+ EA L M G++P + + +
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 548
Query: 194 GLKNCGK 200
L G+
Sbjct: 549 ALSKEGR 555
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV---EFCVEMYYSVC 72
+V+ L G + A ++++M ++G P ++ ++E C G V + +
Sbjct: 121 VVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLH 180
Query: 73 KLGSCADVSTYKILIPAV-SKAGMIDEAFRLLHNLVED-GHNPFPSLYAPIIKG---AFR 127
G DV +++ AV + G +DEA RLL +L G +P Y ++KG A R
Sbjct: 181 GRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKR 240
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D E+ G PPN + TLI R G F L +M + G TP R
Sbjct: 241 WGRVQD---LMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRM 297
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ V DG+ G ++A +I
Sbjct: 298 YATVLDGVCKEGHLEVAHEI 317
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V + +++GL A + ++ +M++ G P++ TFN+LI +C++G E
Sbjct: 220 GCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERV 279
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G D+ Y ++ V K G ++ A +L + G P Y ++KG
Sbjct: 280 HQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKG 339
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+++ A +E+ P + + L+ + G L +M E G P
Sbjct: 340 LCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPD 399
Query: 185 SRCFDLVTDG 194
+ V +G
Sbjct: 400 VITYTTVING 409
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 78/166 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ G G ++ A ++ M G P+ ++ +++ +C +
Sbjct: 391 MLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAER 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + T+ +I + K G++++A LL ++ +G +P Y+
Sbjct: 451 WVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYST 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+I G + G+ D+A + + KG PN +Y+++ + + GR
Sbjct: 511 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRI 556
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P L+QG G + + + ++MI +G PD T+ +LI+ CK+GE
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + ++G ++ TY LI + K G +D A LL + + G +Y
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G + A E+++ G P+ YTT+I R G +A L EM + G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 181 LTPISRCFDLVTDGL 195
L P F+++ +G
Sbjct: 569 LQPTVVTFNVLMNGF 583
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G++ +A + ++M+ + PD T+ +LI+ + G+V +++ + G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI KAG + AF L + +V+ G P Y +I G + G+ D A
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E++ KG N +Y +++ + G +A + EM G+ P + + V D
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Query: 196 KNCGKHDLAEKIEQ 209
G D A K+ Q
Sbjct: 549 CRLGDIDKAHKLLQ 562
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 4/204 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE-VE 62
K + P D+ Q L+ G+L A+++++K++ G +++ N+ + I + E +E
Sbjct: 184 KYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++++ C+ G + ++Y I+I ++ + G + EA RLL + P Y+ +I
Sbjct: 244 MAIKVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G G+ A +++IKG PNR Y ++I + + G+ EA L EM +
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 183 PISRCFDLVTDGLKNCGKHDLAEK 206
P + + + G G A K
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANK 384
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++L+ G G LE +++ M+++G PD T+N+L++ C
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + G D +TY ILI KA + EA+ L ++E G+ P + Y
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+IK +++ + +A F E++ G + +Y + MC G
Sbjct: 684 LIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ GL G L++A +++++M K+G ++ +NS++ ICK+G
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G D TY +I A + G ID+A +LL +++ G P +
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + KG P+ Y TL+ C R Y M
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY-KRMRNQ 637
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P S ++++ G +C +L E
Sbjct: 638 GVAPDSNTYNILIKG--HCKARNLKE 661
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G + ++++ L G ++ A +++ +M + S PD+ +++++I+ C GE++
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + G + TY +I + K G EA ++L ++ P +Y +I G
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ G A +F E+ K P+ YTTLI G+GG+ +E N EM GL P
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 185 SRCFDLVTD 193
+ + D
Sbjct: 433 EVTYTTLID 441
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ G + G L+ A ++++ M +G P+ T+NS+I +CK G+
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + D Y LI K G + A + ++ +P Y
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ + F E+ +G P+ YTTLI + + G V A + EM +MG
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+TP + + DGL G+ D A ++
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANEL 490
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ AG + +A + N+M++ G P++ T+ +LI+ +CK GE
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + K G +V Y ++ + KAG I++A +L+ + G +P Y
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G D A E+ +G P + L+ G + L M E G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 181 LTP 183
+ P
Sbjct: 604 IVP 606
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + +V G+ AG +E A +++ +M G DPD T+ ++I+ C+ G+
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G V T+ +L+ GM+++ RLL ++E G P Y
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K R + + ++ +G P+ Y LI + EA EM E G
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673
Query: 181 LTPISRCFD 189
P ++
Sbjct: 674 YVPTVTSYN 682
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ L G A++++ +M+ Q PD + +LI K G
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + D TY LI + G + E L H ++ G P Y
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +AF +E+ G PN Y LI + G A L EM + G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
L ++ + +G+ G + A K+ +++EV+
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA 532
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 77/193 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++ G ++ A +++ +M+ +G P + TFN L+ C G
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G D TY L+ ++ ++ + G P + Y
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + +A+ + E+ KG+ P Y LI + + +EA EM G
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHG 708
Query: 181 LTPISRCFDLVTD 193
L ++ D
Sbjct: 709 LVADGEIYNFFVD 721
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M + G PP V +V L+ +G ++ A ++V M+ +G P++ T++SL+ +CK+G
Sbjct: 210 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAG 269
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ + + + G ++ TY +I K G IDEA+ LL +V+ G P Y
Sbjct: 270 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 329
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ + G+ +DA + KG+ PN Y +L+ M + A L M +
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389
Query: 180 GLTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
G P ++ V GL K H+ +EQ+
Sbjct: 390 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +L+ G E A +V M+++G P+L T+NSL++ CK E
Sbjct: 316 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ S+ + G +V +Y +I + KA + E LL ++ + P +
Sbjct: 376 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EM 179
II + + D A+ F+ I+ G PN Y +L+ + RF +A L EMT +
Sbjct: 436 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 495
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P ++ V DGL + D A K+
Sbjct: 496 GCSPDIITYNTVIDGLCKSKRVDRAYKL 523
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI-KQGSDPDLETFNSLIETICKSG 59
+ + G P + + LV GL + + A+ ++ +M KQG PD+ T+N++I+ +CKS
Sbjct: 456 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 515
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ +++ + G D TY I+I ++ K +DEA +L ++++G +P Y
Sbjct: 516 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 575
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G D A + KG P+ ++ I + GR +A L M
Sbjct: 576 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 635
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
GL P + ++ + G C + ++ EV
Sbjct: 636 GLVPDTVTYNTLLKGF--CDASRTEDAVDLFEV 666
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D GF P V + ++ G A +E+A ++ +M+ +G PD+ ++ ++I +CK +
Sbjct: 70 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQ 129
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G +V TY L+ + G +D A L+ + E G+ P Y
Sbjct: 130 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 189
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ G + D A F E++ G PP+ Y+T++ + G+ +A + M
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G +P + + GL GK D A + Q
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQ 279
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ GL AG L+ A ++ +M + G P++ T+N++I+ CK G
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G +V TY +L+ A K G ++A L+ +VE G+ P Y
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + + A S + KG PN Y T+I + + E L +M
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P F+ + D + + D+A ++ L
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNL 455
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +++ L +++ A ++ M+K G DP T+ +LI+ CK+G
Sbjct: 527 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 586
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + GS DV T+ I I +SK G + +A LL ++ G P Y
Sbjct: 587 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 646
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG + +DA F ++ G P+ YTTL+ G V+ +Y + E+
Sbjct: 647 LLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV------GHLVDKKSYKDLLAEVS 700
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ + F L H+L+ K+E
Sbjct: 701 KSMVDTGFKL---------NHELSSKLE 719
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG +++GL +AG A +M K PD T+N++I + KS
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G +V +Y ++ KA ++ A LL +V G P Y
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + Q D+A ++ +G PN Y TL+ R G A + +MTE G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + GL + K D A ++
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQL 206
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++++G L+ G N+G L++A+ +VN+M QG D +L FN+LI CK G
Sbjct: 346 LNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGM 405
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + M + K G D+ TY + + K +EA R L +VE G +P +
Sbjct: 406 IDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTI 465
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +A F ++K KG PN Y TLI + G+ EA EM +G
Sbjct: 466 MIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIG 525
Query: 181 LTP 183
+T
Sbjct: 526 MTS 528
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF + + + GL E AK+ + M+++G DP+ +F +I+ CK G
Sbjct: 416 MEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGN 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G +V TY LI SK G + EA+RL + G Y
Sbjct: 476 LVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTT 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ ++A +E+ KG + YT +I+ + GR EA EM G
Sbjct: 536 LVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595
Query: 181 LTPISRCF 188
LTP R +
Sbjct: 596 LTPDDRVY 603
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
LL++ ++G + A+++ KM+++G + D+ F S+I CK G ++ ++ + +
Sbjct: 290 LLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNER 349
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G A+ TY LI +G +D A L++ + G + ++ +I G ++G D+A
Sbjct: 350 GLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEA 409
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
++ KG + Y T+ + R EA +L M E G+ P + F ++ D
Sbjct: 410 LRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMID- 468
Query: 195 LKNCGKHDLAE 205
+C + +L E
Sbjct: 469 -IHCKEGNLVE 478
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P +++ G L A+++ M K+G P++ T+N+LI+ K G+
Sbjct: 451 MVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGK 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + +G +D+ TY L+ G ++EA LL+ + G Y
Sbjct: 511 LKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTA 570
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II G + G+ ++AF + E+ G P+ VYT+L+
Sbjct: 571 IISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + + + L+ G G ++ A +M + M K+G + D+ T+N++ +CK
Sbjct: 381 MQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNR 440
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + G + ++ I+I K G + EA R+ ++ + G P Y
Sbjct: 441 HEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNT 500
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G+ +A+ E++ G + YTTL+ G+ EA L E+ G
Sbjct: 501 LIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKG 560
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L + + GL G+ + A
Sbjct: 561 LAISIVTYTAIISGLSKEGRSEEA 584
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 84/206 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P V + LV + E +M+ M + T+ LIE SG+
Sbjct: 241 MTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGK 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G AD+ + +I K G + AF L L E G Y
Sbjct: 301 IAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGA 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G GQ D A +E++ +G N ++ TLI + G EA M + G
Sbjct: 361 LIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKG 420
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
++ + GL +H+ A++
Sbjct: 421 FENDIFTYNTIAGGLCKLNRHEEAKR 446
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Query: 26 LESAKQMV------NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L+ + QMV KM++ D + + +I+ +CK G VE ++ + G +
Sbjct: 190 LKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPN 249
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V TY L+ A K + +L + D + Y +I+ G+ +A F
Sbjct: 250 VVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFE 309
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
++ +G + V+T++I+ + G A E+ E GL + + + G N G
Sbjct: 310 KMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSG 369
Query: 200 KHDLAE 205
+ D AE
Sbjct: 370 QLDAAE 375
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + L+ GL N G ++ A ++ N+M+++G +P++ ++N++I +CK+G
Sbjct: 153 GIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMA 212
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V+++ + + G DV TY +I ++ K ++++A L +++ G P Y ++ G
Sbjct: 213 VDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHG 272
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ ++A F E+ + P+ T L+ + G EA MTE G+ P
Sbjct: 273 FCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPN 332
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
++ + DG C + + E + E+ +R
Sbjct: 333 ISTYNALMDGY--CLQRLMNEAKKVFEIMIR 361
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++L+ G + ++ AK ++ +M + +PD T+++L++ +C+ G
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ +C G ++ TY IL+ K G +DEA +LL ++ E P +
Sbjct: 419 PKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTI 478
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F G+ + A FS++ G P YT +I + G EA + +M + G
Sbjct: 479 LIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 538
Query: 181 LTPISRCFDLVTDGL 195
P S ++++ G
Sbjct: 539 FLPNSCSYNVMIQGF 553
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V + +V G G L A ++ +M+ + PD T L++ +CK G
Sbjct: 254 MLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGM 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ + G ++STY L+ +++EA ++ ++ G P Y
Sbjct: 314 VSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNI 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A +E+ K P+ Y+TL+ + GR EA N EM G
Sbjct: 374 LINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYG 433
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ DG G D A K+
Sbjct: 434 LLPNLVTYSILLDGFCKHGHLDEALKL 460
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G V ++L+ L +++ A ++ KM K G P TFN+LI +C G+++
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE++ + + G +V +Y +I + K G A + + ++G P Y II
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +DA F SE+ +G PPN Y ++ G+ EA EM + P
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297
Query: 185 SRCFDLVTDGL 195
+ ++ DGL
Sbjct: 298 TVTLTILVDGL 308
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +LV GL G + A+ + M ++G +P++ T+N+L++ C + ++
Sbjct: 296 PDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G V +Y ILI K+ +DEA LL + NP Y+ +++G +
Sbjct: 356 FEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +A F E+ G PN Y+ L+ + G EA L M E L P
Sbjct: 416 FGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVH 475
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ +G+ GK ++A+++
Sbjct: 476 HTILIEGMFIAGKLEVAKEL 495
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 12/216 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P + + L+ G + AK++ MI+QG P + ++N LI CKS
Sbjct: 324 MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRR 383
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
++ EMY+ D TY L+ + + G EA + + G P
Sbjct: 384 MDEAKSLLAEMYHKALN----PDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLV 439
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y+ ++ G + G D+A ++ K PN +T LI G+ A ++
Sbjct: 440 TYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKL 499
Query: 177 TEMGLTPISRCFDLVTDGLKNCG----KHDLAEKIE 208
G+ P R + ++ GL G +DL K+E
Sbjct: 500 FADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ N+M G ++ + N LI +C+ V+F V + + KLG ST+ LI +
Sbjct: 110 LCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLC 169
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G I EA L + +V GH P Y II G + G A F +++ G P+
Sbjct: 170 NEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVV 229
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y T+I + +A +L EM + G+ P ++ + G G+ + A ++
Sbjct: 230 TYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRL 285
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 92/235 (39%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M +G P V + ++ GL G A + KM + G PD+ T+N++I+++CK
Sbjct: 184 MVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRL 243
Query: 58 -SGEVEFCVEMY---------------YSVCKLGSC----------------ADVSTYKI 85
+ +EF EM + C LG D T I
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTI 303
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + K GM+ EA + + E G P S Y ++ G + ++A F + +G
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
P Y LI + R EA + L EM L P + + + GL G+
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ G G+L+ A +++ M ++ +P++ LIE + +G+
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + TY ++I + K G+ DEA+ L + +DG P Y
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 548
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+I+G + A E+ K N + L+ +
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDL 587
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M++ P + F + + K + V + + G +V + +LI + +
Sbjct: 78 RMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLN 137
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D A +L + + G +P S + +I G G+ +A F+E+ +GH PN Y
Sbjct: 138 HVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYN 197
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
T+I + G A + +M + G P ++ + D L
Sbjct: 198 TIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSL 238
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ LLV+ L A + +M+++G PD+ +++ I+ K
Sbjct: 513 MRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKA 572
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ +C G C DV Y LI K + EA +L +V G P Y
Sbjct: 573 VDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNL 632
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF S + K PN YTTLI GR +A + EM G
Sbjct: 633 LIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 692
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P F + GL CG D A
Sbjct: 693 CSPNRISFIALIHGLCKCGWPDAA 716
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + + G + ++ A ++ + +G PD+ +N+LI CK
Sbjct: 548 MVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKR 607
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G V TY +LI K G ID+AF L +V P Y
Sbjct: 608 VSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTT 667
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G G+ DDA ++E++ KG PNR + LI + G A Y EM E
Sbjct: 668 LIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGE 725
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 33 VNK--MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
VNK M+K+ P +F+ +I+ +C +G+++ + ++ + ++G +V Y LI +
Sbjct: 403 VNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKL 462
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
S + ++E + LL + G P + I RR A E+++ GH P
Sbjct: 463 SNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWI 522
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
YT L+ + R EA N+L EM G P + DG D A +I
Sbjct: 523 KHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEI 579
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L N+ LE ++ +M G P T NS+ +C+ +V ++M + G
Sbjct: 458 LIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHG 517
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y +L+ + K EA L +V +G P Y+ I G + D A
Sbjct: 518 HEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQAL 577
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F +I +G+ P+ Y TLI + R EA + L EM GL P ++L+ DG
Sbjct: 578 EIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGW 637
Query: 196 KNCGKHDLA 204
G D A
Sbjct: 638 CKNGDIDQA 646
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G ++ + + +M G +PD T S+++ C S + + + ++ + G D
Sbjct: 172 SGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRG-WVDGHV 230
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
IL+ SK G +D+AF L+ + + G + +I G R+ + D A F +++
Sbjct: 231 LSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQ 290
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G P+ VY LI +A + L EM E+G+ P
Sbjct: 291 KSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP 331
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 97/253 (38%), Gaps = 50/253 (19%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G+ P ++Q N+ + A + N++ +G D + L+ T K GE
Sbjct: 185 MCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGW-VDGHVLSILVLTFSKCGE 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + LG + T+ +LI + +D+A +L + + G P S+Y
Sbjct: 244 VDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDA 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR------------------ 162
+I G + + + A SE+K G P+ + + LI C
Sbjct: 304 LIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTE 363
Query: 163 --------------GGRFVEAANYLME-----------------MTEMGLTPISRCFDLV 191
G+ V+ A YL+ M + + P + F +V
Sbjct: 364 AMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIV 423
Query: 192 TDGLKNCGKHDLA 204
DGL N GK DLA
Sbjct: 424 IDGLCNTGKLDLA 436
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+++G P+ TF +LI+ CK+G+
Sbjct: 197 MHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGK 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+Y + G D+ TY LI K G + + L+ + G P Y
Sbjct: 257 LDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + ++ + + VYT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTD 193
L P S + +V +
Sbjct: 377 LKPDSGTYTIVMN 389
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ N M G+ PD+ T++ LI +CK +
Sbjct: 162 ITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + + G + T+ LI K G +D A + ++ G +P Y
Sbjct: 222 MDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G E+ +KG P++ YTTLI + G A Y +M E
Sbjct: 282 LIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLK 378
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L+ Y + ++++ G L FN L+ CK GE+ ++ ++ K G
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPS 170
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V ++ L+ K G++DE FRL + + G P Y+ +I G + + D+A F
Sbjct: 171 VVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFD 230
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
E+ KG PN +TTLI + G+ A ++ GL+P ++ + G C
Sbjct: 231 EMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGF--CK 288
Query: 200 KHDLAE 205
K DL +
Sbjct: 289 KGDLKQ 294
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + +FN+L+ K G ++
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEG 190
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G+ DV TY +LI + K +DEA L ++E G P + +I G
Sbjct: 191 FRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDG 250
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + +I +G P+ Y TLI + G + + + EM+ GL P
Sbjct: 251 HCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPD 310
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ + DG +C + DL E
Sbjct: 311 KITYTTLIDG--SCKEGDLETAFE 332
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L+ G G L+ A ++ +++ QG PDL T+N+LI CK G+
Sbjct: 232 MLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++E+ +Y
Sbjct: 292 LKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT ++ + G + L EM G
Sbjct: 352 LISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 HVP 414
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G +P + + L+ G G L+ + ++++M +G PD T+ +LI+ CK G++E
Sbjct: 270 QGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLET 329
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E + + D Y LI + K G +A ++L ++ G P Y ++
Sbjct: 330 AFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMN 389
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPN 149
+ G + E++ GH P+
Sbjct: 390 EFCKNGDVNTGSKLLKEMQRDGHVPS 415
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T +++ + K + Y + + G
Sbjct: 72 LITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P+ Y+ LI + + EA EM E GL P F + DG
Sbjct: 192 RLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
GK DLA +I
Sbjct: 252 CKNGKLDLAMEI 263
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 36/248 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P + +L++ L+ A + N+M+K +PD+ T+ LI +CK+ +
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213
Query: 61 VEFCVEMY--------------YSVCKLGSCA---------------------DVSTYKI 85
+ + ++ YS+ G C D+ TY +
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ K+G +D+AF LL L +DGH Y +I G FR ++++A ++ ++ +
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ +YT +I + GR EA L EMTE GL P + C++ + G + G D AE
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393
Query: 206 KIEQLEVS 213
+ +LE+S
Sbjct: 394 SL-RLEIS 400
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +L+ G+ G + A+ + +M K G P + TFNSLI +CK+ +E +
Sbjct: 406 PNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLL 465
Query: 68 YYSV---------CKLGS----CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+Y + +L D+++ ++++ + ++GMI +A++LL LV+ G P
Sbjct: 466 FYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPD 525
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y +I G + G + AF F E+++KGH P+ Y TLI R GR +A
Sbjct: 526 IRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585
Query: 175 EMTEMGLTPISRCFDLV 191
+M + G P S + +
Sbjct: 586 QMVKKGCVPESSTYKTI 602
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 13/188 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM-----------IKQGSDP--DLET 47
M G P V + L+ GL A LE A+ + +M + QG+D D+ +
Sbjct: 434 MEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
++E +C+SG + ++ + G D+ TY ILI K G I+ AF+L +
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ 553
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
GH P Y +I G +R G+ +DA F ++ KG P Y T++T R
Sbjct: 554 LKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNIS 613
Query: 168 EAANYLME 175
A + M+
Sbjct: 614 LALSVWMK 621
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G N + ++L+ G +GYL+ A ++ + K G + + LI + ++
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E Y + + DV Y I+I +S+ G + EA LL + E G P Y
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG G D+A EI PN Y+ LI + G +A + EM ++G
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P F+ + +GL C + L E
Sbjct: 439 CLPSVVTFNSLINGL--CKANRLEE 461
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 99/220 (45%), Gaps = 13/220 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++++GL G + A ++ +M ++G PD +N+LI+ C G
Sbjct: 329 MLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGY 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K + TY ILI + K G+I++A + + + G P +
Sbjct: 389 LDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNS 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP--------NRPVY--TTLITMCGR---GGRFV 167
+I G + + ++A F +++I P V+ +L M R G +
Sbjct: 449 LINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMIL 508
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+A LM++ + G+ P R ++++ +G G + A K+
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKL 548
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ AG E A + + M PDL FN ++ + + + +Y + K
Sbjct: 133 VLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC 192
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
DV TY ILI + K +A L + + G P +Y+ ++ G + + DA
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
FS+++ G + Y L+ + G +A L +T+ G
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG 298
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 84/198 (42%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+DL++ L+ E +++ ++ E F+ LIE ++G E VE + +
Sbjct: 96 QDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMR 155
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
D+ + +++ + + A + + +++ NP Y +I G + +
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA F E+ +G PN+ +Y+ +++ + + +A +M G ++++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275
Query: 193 DGLKNCGKHDLAEKIEQL 210
+G G D A + QL
Sbjct: 276 NGFCKSGYLDDAFTLLQL 293
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ LLV+ L A + +M+++G PD+ +++ I+ K
Sbjct: 553 MRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKA 612
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ +C G C DV Y LI K + EA +L +V G P Y
Sbjct: 613 VDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNL 672
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF S + K PN YTTLI GR +A + EM G
Sbjct: 673 LIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 732
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P F + GL CG D A
Sbjct: 733 CSPNRISFIALIHGLCKCGWPDAA 756
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + + G + ++ A ++ + +G PD+ +N+LI CK
Sbjct: 588 MVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKR 647
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G V TY +LI K G ID+AF L +V P Y
Sbjct: 648 VSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTT 707
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G G+ DDA ++E++ KG PNR + LI + G A Y EM E
Sbjct: 708 LIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGE 765
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 33 VNK--MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
VNK M+K+ PD +F+ +I+ +C +G+++ + ++ + ++G +V Y LI +
Sbjct: 443 VNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKL 502
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
S + ++E + LL + G P + I RR A E+++ GH P
Sbjct: 503 SNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWI 562
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
YT L+ + R EA N+L EM G P + DG D A +I
Sbjct: 563 KHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEI 619
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L N+ LE ++ +M G P T NS+ +C+ +V ++M + G
Sbjct: 498 LIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHG 557
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y +L+ + K EA L +V +G P Y+ I G + D A
Sbjct: 558 HEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQAL 617
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F +I +G+ P+ Y TLI + R EA + L EM GL P ++L+ DG
Sbjct: 618 EIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGW 677
Query: 196 KNCGKHDLA 204
G D A
Sbjct: 678 CKNGDIDQA 686
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ + +G ++ + + +M G +PD T S+++ C S + + + ++ + G
Sbjct: 205 LLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRG 264
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D IL+ SK G +D+AF L+ + + G + +I G R+ + D A
Sbjct: 265 -WVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKAL 323
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F +++ G P+ VY LI +A + L EM E+G+ P
Sbjct: 324 QLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP 371
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 97/253 (38%), Gaps = 50/253 (19%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G+ P ++Q N+ + A + N++ +G D + L+ T K GE
Sbjct: 225 MCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGW-VDGHVLSILVLTFSKCGE 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + LG + T+ +LI + +D+A +L + + G P S+Y
Sbjct: 284 VDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDA 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR------------------ 162
+I G + + + A SE+K G P+ + + LI C
Sbjct: 344 LIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTE 403
Query: 163 --------------GGRFVEAANYLME-----------------MTEMGLTPISRCFDLV 191
G+ V+ A YL+ M + + P + F +V
Sbjct: 404 AMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIV 463
Query: 192 TDGLKNCGKHDLA 204
DGL N GK DLA
Sbjct: 464 IDGLCNTGKLDLA 476
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
++ L+ A+SK+G ID L + + G P +++ +FD A F+EI
Sbjct: 201 SFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEI 260
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+G V + L+ + G +A + M ++G+ + F ++ G +
Sbjct: 261 YGRGWVDGH-VLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRV 319
Query: 202 DLAEKI 207
D A ++
Sbjct: 320 DKALQL 325
>gi|399107202|gb|AFP20365.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 91/177 (51%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 61
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+K+G +++A RLLH ++++G Y+ ++ G + G+ ++A +F G
Sbjct: 62 DGYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLA 121
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N Y++LI G+ GR EA EM+E G T S C++ + D L GK B A
Sbjct: 122 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEA 178
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 10 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 70 VEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 129
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMXLFKRMEE 187
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G + Y+ ++ + GR EA +Y GL
Sbjct: 63 GYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAI 122
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 123 NSMFYSSLIDGLGKAGRIDEAERL 146
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G D+ T++ ++ +CK+G
Sbjct: 45 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGR 104
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 105 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 164
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +BEA L + E+G + Y +I G F+
Sbjct: 165 LIDALTKHGKVBEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 207
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V ++L+ G+ G L+ A + +N M G P++ T N ++ ++C +G
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V T+ ILI + + G++ A +L + G P Y P
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A + + +G P+ Y TL+T + G+ A L +++ G
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P+ ++ V DGL GK + A K+
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKL 426
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V ++L+ L G L A ++ KM G P+ ++N L+ CK +
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + G D+ TY L+ A+ K G +D A +L+ L G +P Y
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A E++ KG P+ Y++L++ R G+ EA + ++ +G
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ + GL + D A
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRA 493
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G ++ A + ++ M+ +G PD+ T+N+L+ +CK G+V+
Sbjct: 329 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 388
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + G + TY +I +SK G + A +LL + G P Y+ ++ G
Sbjct: 389 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 448
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ D+A FF +++ G PN Y +++ + + A ++L M P
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 508
Query: 185 SRCFDLVTDGL 195
+ ++ +G+
Sbjct: 509 EATYTILIEGI 519
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + +++ L ++G L+ A +++++ +++ PD+ T+ LIE CK V +++
Sbjct: 157 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKL 216
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ GS DV TY +LI + K G +DEA + L+N+ G P + I++
Sbjct: 217 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCS 276
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G++ DA S++ KG P+ + LI R G A + L +M G TP S
Sbjct: 277 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEV 212
++ + G C + + IE L++
Sbjct: 337 YNPLLHGF--CKEKKMDRAIEYLDI 359
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G ++ A +++N++ +G P L T+N++I+ + K G+
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + G D+ TY L+ +S+ G +DEA + H+L G P Y
Sbjct: 420 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 479
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q D A F + + K P YT LI G EA + L E+ G
Sbjct: 480 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539
Query: 181 LTPIS 185
L S
Sbjct: 540 LVKKS 544
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 34/228 (14%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE--------- 66
L++G G + A ++ + + G+ PD+ T+N LI CKSGE++ ++
Sbjct: 98 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAP 157
Query: 67 -------MYYSVCKLGSCA----------------DVSTYKILIPAVSKAGMIDEAFRLL 103
+ ++C G DV TY ILI A K + +A +LL
Sbjct: 158 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLL 217
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ G P Y +I G + G+ D+A F + + G PN + ++
Sbjct: 218 DEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCST 277
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
GR+++A L +M G +P F+++ + L C + L I+ LE
Sbjct: 278 GRWMDAEKLLSDMLRKGCSPSVVTFNILINFL--CRQGLLGRAIDILE 323
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 32/223 (14%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
++ L+ G LE + + M+ +G PD+ SLI C+ G+ + + + + G+
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 77 CADVSTYKILIPAVSKAGMIDEAFR----------------LLHNLVEDG---------- 110
DV TY +LI K+G ID A + +L L + G
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 111 ----HNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+P + Y +I+ + A E++ KG P+ Y LI + G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R EA +L M G P +++ + + G+ AEK+
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 286
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++KG P ++L+ L+ A + + + ++ +G PD+ F + I CK G+
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 264
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE V+++ + + G +V T+ +I + G DEAF +VE G P Y+
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R + DA+ E+ KG PPN VY LI G +A M G
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+ S ++ + G G+ D AE++
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERL 411
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +++ G A E ++ ++M+ + P+ +N LI C+SG +
Sbjct: 594 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 653
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + G + +TY LI +S ++EA L + +G P Y +I G
Sbjct: 654 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 713
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ GQ C E+ K PN+ YT +I R G EA+ L EM E G+ P
Sbjct: 714 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 773
Query: 185 S 185
S
Sbjct: 774 S 774
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + +LV+GL A + A ++ +M K+G P++ +N+LI++ ++G
Sbjct: 310 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 369
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G STY LI K G D A RLL ++ G N +
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I FD A F E+ ++ P + TTLI+ + G+ +A + G
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+R + + GL GK D A +I++
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQK 518
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ GL N +E A Q + + G PD+ T++ +I+ CK+
Sbjct: 555 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 614
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E + + + Y LI A ++G + A L ++ G +P + Y
Sbjct: 615 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 674
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + ++A F E++++G PN YT LI G+ G+ V+ L EM
Sbjct: 675 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 734
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ G G A ++
Sbjct: 735 VHPNKITYTVMIGGYARDGNVTEASRL 761
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
+ +G P T N L+ ++ ++ E + C E + VCK G DV + I A K G
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGK 264
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++EA +L + E G P + +I G G++D+AF F ++ +G P Y+
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L+ R R +A L EMT+ G P ++ + D G + A +I+ L VS
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 382
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF R + L+ GL AG L+ A ++ +++ +G D ++N+LI C +++
Sbjct: 487 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 546
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ K G D TY ILI + ++EA + + +G P Y+ +I
Sbjct: 547 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 606
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + ++ FF E+ K PN VY LI R GR A +M G++
Sbjct: 607 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 666
Query: 183 PISRCFDLVTDGL 195
P S + + G+
Sbjct: 667 PNSATYTSLIKGM 679
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G A ++ + + +G D T N+L+ +C++G+++ + + G
Sbjct: 465 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 524
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +Y LI +DEAF L +V+ G P Y+ +I G F + ++A
Sbjct: 525 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 584
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ + K G P+ Y+ +I C + R E + EM + P + ++ +
Sbjct: 585 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 644
Query: 196 KNCGKHDLAEKIEQ 209
G+ +A ++ +
Sbjct: 645 CRSGRLSMALELRE 658
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G L+ A +++M+K+G PD T++ LI + +VE ++ + +
Sbjct: 533 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 592
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY ++I KA +E ++ P +Y +I+ R G+
Sbjct: 593 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 652
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++K KG PN YT+LI R EA EM GL P + + D
Sbjct: 653 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 712
Query: 194 GLKNCGK 200
G G+
Sbjct: 713 GYGKLGQ 719
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + ++ GL G + A KM+++G +P L T++ L++ + ++
Sbjct: 275 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 334
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K G +V Y LI + +AG +++A + +V G + S Y
Sbjct: 335 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 394
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + GQ D+A E+ G N+ +T++I + F A ++ EM
Sbjct: 395 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 454
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++P + GL GKH A
Sbjct: 455 MSPGGGLLTTLISGLCKHGKHSKA 478
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KGF P V + L+ + AG L A ++ + M+ +G T+N+LI+ CK+G+
Sbjct: 345 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 404
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G + ++ +I + M D A R + ++ +P L
Sbjct: 405 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 464
Query: 121 IIKGAFRR-----------------------------------GQFDDAFCFFSEIKIKG 145
+I G + G+ D+AF EI +G
Sbjct: 465 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 524
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+R Y TLI+ C + EA +L EM + GL P + + ++ GL N K
Sbjct: 525 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 579
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P L++G+ +E AK + +M +G +P++ + +LI+ K G+
Sbjct: 660 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 719
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + TY ++I ++ G + EA RLL+ + E G P Y
Sbjct: 720 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 779
Query: 121 IIKGAFRRGQFDDAF 135
I G ++G +AF
Sbjct: 780 FIYGYLKQGGVLEAF 794
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P V + L+ G ++ A + +M ++ P+ T+N+L+ C G
Sbjct: 340 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGR 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +++ + G D++TY+IL+ + K +DEA LL + +P +Y
Sbjct: 399 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ + A FS + KG PN YT +I R G EA MEM G
Sbjct: 459 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 518
Query: 181 LTPISRCFDLVTDGL 195
+P ++ +T GL
Sbjct: 519 CSPDGCTYNTITQGL 533
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L+ + L A ++ K++K G PD TF +LI +C G+
Sbjct: 95 MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K G + A RLL ++ + P +Y
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + Q +AF FS++ +G P+ YT+LI + L +M
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAE 205
+ P F V D L GK HD+ +
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVD 303
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + L+ L N + ++N+MI PD+ F+++++ +CK G+
Sbjct: 235 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +V TY L+ +DEA ++ +V +G+ P Y
Sbjct: 295 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 354
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F E+ K PN Y TL+ C GR +A EM G
Sbjct: 355 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHG 413
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + ++ D L C K L E + L+
Sbjct: 414 QIPDLATYRILLDYL--CKKSHLDEAMALLKT 443
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 1/204 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ G ++ A ++ + M+ G P++ ++N+LI CK ++
Sbjct: 308 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 367
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ +C+ + TY L+ G + +A L H +V G P + Y ++
Sbjct: 368 ATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLD 426
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ D+A I+ P+ +YT +I R G A + ++ GL P
Sbjct: 427 YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRP 486
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
R + ++ +GL G D A K+
Sbjct: 487 NVRTYTIMINGLCRRGLLDEANKL 510
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
+ G L+ A + ++M+ G PDL T+ L++ +CK ++ + + ++ D+
Sbjct: 395 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
Y I+I + +AG ++ A + NL G P Y +I G RRG D+A F E+
Sbjct: 455 IYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G P+ Y T+ + + A L EM G +
Sbjct: 515 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFS 555
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ N+M G PD+ T N LI + C + F + + KLG D +T+ LI +
Sbjct: 91 LSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLC 150
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G I +A L ++ +G P Y +I G + G + A ++ P+
Sbjct: 151 VEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV 210
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
VYT++I + + EA N +M G++P
Sbjct: 211 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 242
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V ++ L + A + +KM+ QG PD+ T+ SLI ++C E
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV + ++ A+ K G I EA ++ ++ G P Y
Sbjct: 260 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D+A F + G+ PN Y TLI + R +A EM +
Sbjct: 320 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 379
Query: 181 LTP 183
L P
Sbjct: 380 LIP 382
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
LN L+ A N+M+ P FN L+ +I K+ + + + G DV
Sbjct: 45 LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 104
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T ILI + + AF +L +++ GH P + + +I+G G+ DA F +
Sbjct: 105 YTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDK 164
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + G A L M + P + + D L
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 219
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ L +L+ A ++ + DPD++ + +I+ +C++GE
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ ++ G +V TY I+I + + G++DEA +L + +G +P Y
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
I +G + + A E+ +G + T L+ M
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 567
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 82/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P V L+ GL G +A +++ M + PD+ + S+I+++CK +
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 224
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G D+ TY LI ++ LL+ ++ P +++
Sbjct: 225 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 284
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A + I+G PN Y L+ EA M G
Sbjct: 285 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 344
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + +G + D A
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKA 368
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P VR +++ GL G L+ A ++ +M G PD T+N++ + + ++ E
Sbjct: 479 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 538
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
+++ + G ADVST +L+ + + ++L V+
Sbjct: 539 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MSD G P V L++G G +E+A +M N+M G +P+ F +LI+ CK G
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++Y + G D+ Y L+ + +A + A ++ + G P Y
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTT 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A ++ K + YT LI+ + GR V+A L EM E
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + +V D C K D+
Sbjct: 426 LEPDNTTYTMVIDAF--CRKGDV 446
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P R ++L++ + G L SA+++ ++M ++ P + TFN+LI +C++ +++
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLD 237
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+Y + +G DV TY LI + G ++ A ++ + + + G NP ++ +I
Sbjct: 238 AVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLI 297
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ G + + +++++G P+ Y L+ R A + + EM GL
Sbjct: 298 DAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLK 357
Query: 183 PISRCFDLVTDGLKNCGKHDLA----EKIEQLEVSLRSV 217
P + + DG GK D+A +K+ + EVSL V
Sbjct: 358 PDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEV 396
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + LV GL A L++A+ +V +M G PD T+ +LI+ CK G+
Sbjct: 316 MRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGK 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + D TY LI +SKAG +A R+L ++E P + Y
Sbjct: 376 LDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTM 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R+G F E++ KG P Y ++ + G+ A L M +G
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIG 495
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
++P ++++ DG C KH E+LE S
Sbjct: 496 VSPDDITYNILLDG--QC-KHGKVANSEELESS 525
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 2/213 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ P V + L+ G+ A L++ + +M G PD+ T+ +LI+ C++G +E
Sbjct: 214 RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMEN 273
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
V+M+ + G + + LI A K G ++ L ++ G P Y ++
Sbjct: 274 AVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVN 333
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R A E+K G P++ YTTLI C + G+ A + +M E ++
Sbjct: 334 GLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSL 393
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
+ + GL G+ AE++ E +E +L
Sbjct: 394 DEVTYTALISGLSKAGRPVDAERVLREMMEAAL 426
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + +++G+ +A E A++++ +M ++ D TFN L++ C++G
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G DV TY +I K G+IDEA LL N+ G P Y
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG ++ DA S + +G PN + T+I + G +A L +M G
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + V DGL GK + E +E L V
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTE--EALELLNV 501
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P +R ++ G+ G+ E A +++++M G P++ +N++++ IC +
Sbjct: 257 MAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADR 316
Query: 61 V----EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
E EMY C L D T+ IL+ + G++D LL ++E G P
Sbjct: 317 WEKAEELLTEMYQKNCPL----DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI 372
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +I G + G D+A + G PN YT ++ R+V+A + M
Sbjct: 373 TYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRM 432
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ G P F+ + + L C K + + IE L+
Sbjct: 433 IQQGCLPNPVTFNTIINFL--CKKGLVEQAIELLK 465
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++++GL + A++++++MI+QG P+ TFN++I +CK G
Sbjct: 397 MPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGL 456
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + G D+ +Y +I + KAG +EA LL+ ++ G P Y+
Sbjct: 457 VEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSS 516
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ R G+ D F I+ + +Y +I+ + A ++L M G
Sbjct: 517 MAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNG 576
Query: 181 LTPISRCFDLVTDGLKN----CGKHDLAEKI 207
P + + GL + C DL ++
Sbjct: 577 CMPNESTYTALIKGLASEGLLCEAQDLLSEL 607
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 81/170 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ +++ +M++ G PD+ T+ ++I CK G ++ V + ++
Sbjct: 340 NILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPS 399
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y I++ + +A L+ +++ G P P + II ++G +
Sbjct: 400 CGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQ 459
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A ++ + G P+ Y+T+I G+ G+ EA L M G+TP
Sbjct: 460 AIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITP 509
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ G G ++ A ++ M G P+ ++ +++ +C +
Sbjct: 362 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTER 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + + G + T+ +I + K G++++A LL ++ +G NP Y+
Sbjct: 422 WVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYST 481
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+I G + G+ ++A + + KG PN Y+++ R GR
Sbjct: 482 VIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRI 527
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+GL G + A ++++M + P ++ +IE+ C+SG + + ++ G
Sbjct: 122 VVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKG 181
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG---AFRRGQFD 132
S D ++I A+ G +DE +L L G Y ++KG A R G +
Sbjct: 182 STLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVE 241
Query: 133 D-------AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ S++ G P+ +Y T+I + G A L M GL P
Sbjct: 242 ELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNV 301
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
C++ V G+ + + + AE++
Sbjct: 302 VCYNTVLKGICSADRWEKAEEL 323
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 11/207 (5%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++ +G SA +++ + +GS D N +I IC G V+ +EM +
Sbjct: 156 VIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLF 215
Query: 75 GSCADVSTYKILIPAVSKAG-------MIDEAFRL---LHNLVEDGHNPFPSLYAPIIKG 124
G AD+ +Y ++ + A ++DE ++ L + + G P +YA II G
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G + A S + G PN Y T++ R+ +A L EM +
Sbjct: 276 ICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD 335
Query: 185 SRCFDLVTDGLKNCGKHD-LAEKIEQL 210
F+++ D G D + E +EQ+
Sbjct: 336 DVTFNILVDFFCQNGLVDRVIELLEQM 362
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 14/166 (8%)
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
++LI ++C +G V + G+ A V Y ++ + G ++ A RL +
Sbjct: 55 LSALIRSLCVAGRTADAVRALDAA---GNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV- 110
Query: 108 EDGHNPFPS---LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
P P Y P+++G RG+ DA E+ + P P+Y +I R G
Sbjct: 111 -----PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSG 165
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ A L + G T + +LV + + C + + E +E L
Sbjct: 166 GYSSALRVLEALHAKGSTLDTGNCNLVINAI--CDQGCVDEGLEML 209
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + +VQG N G + A ++++M + G +PD+ T+N LI C G
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G AD TY +LI A+ K G +DEA L L G P +
Sbjct: 386 IESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT 445
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMC-GRGGRFVEAANYLMEMTE 178
+I G + G+FD A F ++ G P+ Y+ I +C +G R E +++ EM +
Sbjct: 446 VINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSR--EGLSFIDEMLQ 503
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + + +V D L + LA +I VSL
Sbjct: 504 KDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSL 539
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P +V G + A ++ M +G +P++ T+N++++ C G+
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGK 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + + G DV TY +LI G I+ AFRLL + +G Y
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNV 410
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F ++ +G PN + T+I +GG+F A +L +M G
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470
Query: 181 LTP 183
P
Sbjct: 471 CAP 473
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P R LV E A++M+N+M G P T +++ C+ G
Sbjct: 256 MKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGR 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V ++ S+ G +V TY ++ G + +A LL + E G P Y
Sbjct: 316 MSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNL 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G + AF ++ G ++ Y LI + G+ EA + + G
Sbjct: 376 LIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S F+ V +GL GK D+A
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVA 459
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V +LL++G G++ESA +++ M G D T+N LI+ +CK+G+
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G + T+ +I + K G D A L +V G P Y+P
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK-----------------------------------G 145
I+ + + F E+ K G
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLG 540
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ YTT + GR EA N +MEM + G+ + ++ + DG + GK D A
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAV 600
Query: 206 KI 207
I
Sbjct: 601 TI 602
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L L A++ ++ M++ G PD TFNSLI C++ +++ +++ + G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY--APIIKGAFRRGQFDD 133
D +Y LI + G +DEA L L + P +Y A ++KG + ++
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQ------PDMYTHAALVKGLCDARRGEE 248
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++K G P Y L+ + R + EA L EM + GL P
Sbjct: 249 GLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVP 298
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + L+ G L+ A+ + +KM +G D ++ +LIE C++G
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ + + D+ T+ L+ + A +E +L + E G P YA
Sbjct: 215 VDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R + ++A +E+ G P T ++ R GR A M G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++ + G N GK
Sbjct: 331 CEPNVWTYNAMVQGFCNVGK 350
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+ L++G G ++ A ++ ++ PD+ T +L++ +C +
Sbjct: 190 MPLRGFSQDAVSYAALIEGFCETGRVDEALELFREL----EQPDMYTHAALVKGLCDARR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + M + +LG Y L+ + +EA ++L+ + ++G P
Sbjct: 246 GEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTA 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G+ A F +K+KG PN Y ++ G+ +A L +M E G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 181 LTPISRCFDLVTDG 194
+ P ++L+ G
Sbjct: 366 VEPDVVTYNLLIRG 379
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 4/165 (2%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P T+N+LI +C+ ++ + + G D T+ LI + +D A L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ G + YA +I+G G+ D+A F E++ P+ + L+
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCD 242
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R E L +M E+G P +R + + D K + AEK+
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKM 287
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 77/198 (38%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P + LV+GL +A E M+ KM + G P + +L++ C+ + E +
Sbjct: 227 QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEK 286
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
M + G T ++ A + G + A R+ ++ G P Y +++G
Sbjct: 287 MLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFC 346
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G+ A +++ G P+ Y LI G A L M GL
Sbjct: 347 NVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQY 406
Query: 187 CFDLVTDGLKNCGKHDLA 204
++++ D L GK D A
Sbjct: 407 TYNVLIDALCKTGKVDEA 424
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 8/184 (4%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-GEVE 62
+G P + ++ GL G + A + KM+ G PD T++ IE +CK+ G E
Sbjct: 434 RGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSRE 493
Query: 63 ---FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
F EM K + Y I+I + K A R+ +V G +P Y
Sbjct: 494 GLSFIDEMLQKDVKPSTV----NYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYT 549
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G+ +A E+K G + Y TLI G+ A L MT +
Sbjct: 550 TSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGV 609
Query: 180 GLTP 183
P
Sbjct: 610 ASMP 613
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V V+ N G L A+ +V +M K G D +N+LI+ G+
Sbjct: 536 MVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGK 595
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKIL------------IP----AVSKAGMIDEAFRLLH 104
+ V + + + S + T+ IL +P +V K + + F L
Sbjct: 596 TDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFE 655
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ ++ Y I++G + D+ S +K P N +YT+L+ +
Sbjct: 656 LMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLR 715
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +A L M G P + + G G+ D A++I
Sbjct: 716 MYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEI 758
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P L+QG G + + + ++MI +G PD T+ +LI+ CK+GE
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + ++G ++ TY LI + K G +D A LL + + G +Y
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G + A E+++ G P+ YTT+I R G +A L EM + G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 181 LTPISRCFDLVTDGL 195
L P F+++ +G
Sbjct: 569 LQPTVVTFNVLMNGF 583
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++L+ G G LE +++ M+++G PD T+N+L++ C
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + G D +TY ILI KA + EA+ L ++E G+ P + Y
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+IK +++ +F +A F E++ G + +Y + MC G
Sbjct: 684 LIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G++ +A + ++M+ + PD T+ +LI+ + G+V +++ + G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI KAG + AF L + +V+ G P Y +I G + G+ D A
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E++ KG N +Y +++ + G +A + EM G+ P + + V D
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Query: 196 KNCGKHDLAEKIEQ 209
G D A K+ Q
Sbjct: 549 CRLGDIDKAHKLLQ 562
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 4/204 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE-VE 62
K + P D+ Q L+ G+L A+++++K++ G +++ N+ + I + E +E
Sbjct: 184 KYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++++ C+ G + ++Y I+I ++ + G + EA RLL + P Y+ +I
Sbjct: 244 MAIKVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G G+ A +++IKG PNR Y ++I + + G+ EA L EM +
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 183 PISRCFDLVTDGLKNCGKHDLAEK 206
P + + + G G A K
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANK 384
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ GL G L++A +++++M K+G ++ +NS++ ICK+G
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G D TY +I A + G ID+A +LL +++ G P +
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + KG P+ Y TL+ C R Y M
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY-KRMRNQ 637
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P S ++++ G +C +L E
Sbjct: 638 GVAPDSNTYNILIKG--HCKARNLKE 661
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G + ++++ L G ++ A +++ +M + S PD+ +++++I+ C GE++
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + G + TY +I + K G EA ++L ++ P +Y +I G
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ G A +F E+ K P+ YTTLI G+GG+ +E N EM GL P
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 185 SRCFDLVTD 193
+ + D
Sbjct: 433 EVTYTTLID 441
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ G + G L+ A ++++ M +G P+ T+NS+I +CK G+
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + D Y LI K G + A + ++ +P Y
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ + F E+ +G P+ YTTLI + + G V A + EM +MG
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+TP + + DGL G+ D A ++
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANEL 490
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ AG + +A + N+M++ G P++ T+ +LI+ +CK GE
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + K G +V Y ++ + KAG I++A +L+ + G +P Y
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G D A E+ +G P + L+ G + L M E G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 181 LTP 183
+ P
Sbjct: 604 IVP 606
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + +V G+ AG +E A +++ +M G DPD T+ ++I+ C+ G+
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G V T+ +L+ GM+++ RLL ++E G P Y
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K R + + ++ +G P+ Y LI + EA EM E G
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673
Query: 181 LTPISRCFD 189
P ++
Sbjct: 674 YVPTVTSYN 682
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ L G A++++ +M+ Q PD + +LI K G
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + D TY LI + G + E L H ++ G P Y
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +AF +E+ G PN Y LI + G A L EM + G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
L ++ + +G+ G + A K+ +++EV+
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA 532
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++ G ++ A +++ +M+ +G P + TFN L+ C G
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G D TY L+ ++ ++ + G P + Y
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + +A+ + E+ KG+ P Y LI + +F EA EM G
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHG 708
Query: 181 LTPISRCFDLVTD 193
L ++ D
Sbjct: 709 LVADGEIYNFFVD 721
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P V ++L+ L G +E A ++++++ K G P+ ++N ++ CK +
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ +Y L+ A+ + G +D A LLH L + G P Y
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++A +E+ KG P+ Y+T+ + R GR EA ++ +MG
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ + GL
Sbjct: 463 IRPNTVLYNAILLGL 477
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + +++V G+ G ++ A + + + G +P+ ++N +++ +C +
Sbjct: 213 MRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAER 272
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + + G +V T+ +LI + + G+++ A +L + + G P Y P
Sbjct: 273 WEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNP 332
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + D A F + G P+ Y TL+T RGG A L ++ + G
Sbjct: 333 ILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 392
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
TP+ ++ V DGL GK + A
Sbjct: 393 CTPVLISYNTVIDGLTKAGKTEEA 416
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
P + L++GL G ++A +++ M+++G PD+ T+ L+E CK + V
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + G D+ TY +++ + + G +D+A L +L G P Y ++KG
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+++DA +E+ KG PPN + LI+ R G A L ++ + G TP S
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + K D A +L VS
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVS 355
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + +V G G L++A+++V M + PD T+N+LI +C G + + +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAV 174
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV TY IL+ A K +A +LL + + G P Y ++ G +
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DDA F + G PN Y ++ R+ +A + EM+ G P
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294
Query: 188 FDLV 191
F+++
Sbjct: 295 FNML 298
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ L G +++A ++++++ +G P L ++N++I+ + K+G+
Sbjct: 353 MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + G D+ TY + + + G I+EA + + + G P LY
Sbjct: 413 TEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNA 472
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G +R A F+ + G PN YT LI G EA + E+ G
Sbjct: 473 ILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532
Query: 181 L 181
+
Sbjct: 533 V 533
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ L + G + A+ + + MI++G PD T+ ++I+ K G
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 368
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + K G D Y L+ K +D+AF + +V G P +
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G F+ G+ D AF F E+ K PP YT LI G+ GR EA EM +
Sbjct: 429 LMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDR 488
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
G+ P + + L G+ A+K+ + V L
Sbjct: 489 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 523
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P ++Q G +E+A +++ M K G PD +NSL++ K
Sbjct: 344 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 403
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V+ +Y + G + T+ +L+ + K G D AF L ++E P P+L Y
Sbjct: 404 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP-PTLVSY 462
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ +AF F E+ +G P YT+LI + GR EA + +M +
Sbjct: 463 TILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 522
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+G+ P + + + GL + D A + Q
Sbjct: 523 LGVNPDVQAYSALITGLIDSSMVDTAWDVFQ 553
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V L+ G AG + +++N+ +K+ PD+ + S+I CK+G+
Sbjct: 33 MIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFR-PDVFLYTSVIHGYCKAGD 91
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y+ + DV +Y +I ++ + IDEA L L G +P Y
Sbjct: 92 LD---TGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTA 148
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +D F E+ P R YT +I + +A +M + G
Sbjct: 149 VIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 208
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + + DG K D A K+
Sbjct: 209 CVPDTITYTTLIDGFSKASKMDEARKL 235
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ G +P V ++ GLL AG +E + +M P T+ +I+ +CK+
Sbjct: 134 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQM 193
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G D TY LI SKA +DEA +LL ++ G P Y
Sbjct: 194 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 253
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + ++A ++++ +G P ++T+L++ GR EA L EMT G
Sbjct: 254 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 313
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + D L + G+
Sbjct: 314 CAPDVILYTSLIDLLFSTGR 333
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI-KQGSDPDLETFNSLIETICKSG 59
M G P ++L+ GL G + A + +M+ K+ P L ++ LI+ + K+G
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V + + G + TY LI +++KAG I EA +L+ ++V+ G NP Y+
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 533
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I G D A+ F E+ +G PN Y L
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G A ++ A+++++ M+ +G +P T+ S++ CK
Sbjct: 204 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 263
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + + G + + L+ G +EA+++L + G P LY
Sbjct: 264 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 323
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEM 179
+I F G+ +A F + KG P+ Y T+I + G VEAA ++E M +
Sbjct: 324 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN-VEAAGEILELMAKS 382
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
G+ P ++ + DG + D A
Sbjct: 383 GVGPDCFAYNSLMDGYVKLERVDQA 407
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L+ GL AG + A +MI +G P+ T+ SLI ++ K+G + ++
Sbjct: 457 PTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 516
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ KLG DV Y LI + + M+D A+ + +++ G P Y + +G FR
Sbjct: 517 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG-FR 575
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+ L AG + AK++V M+K G +PD++ +++LI + S
Sbjct: 485 MIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSM 544
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
V+ +++ + K G + TYK+L AG
Sbjct: 545 VDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG+ P + LV G G A + +M++ G P++ T+ SLI ++CK+G
Sbjct: 79 MSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGN 138
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + + G C + TY +I ++ G++DEA+R+L+ + G P Y
Sbjct: 139 LNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNA 198
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ ++A ++ KG P+ Y+T+I+ R A +EM
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS 258
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + + + GL C + L E + +
Sbjct: 259 VLPDAVTYSSLIQGL--CEQRRLTEACDMFQ 287
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ G + A + M +G +P+L TFN +I +C+ G
Sbjct: 9 MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + + G D TY L+ K G +A L +V +G +P Y
Sbjct: 69 LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTS 128
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G + A FF ++ ++G PN YTT+I + G EA L EMT G
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188
Query: 181 LTPISRCFDLVTDG 194
P ++ + +G
Sbjct: 189 FIPSIVTYNALING 202
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P R ++ G G L+ A +++N+M + G P + T+N+LI C G
Sbjct: 149 MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGR 208
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G DV +Y +I ++ +D AF++ ++ P Y+
Sbjct: 209 MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSS 268
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + + +A F E+ PP+ YTTLI + G +A + EM + G
Sbjct: 269 LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++++ +GL + A ++
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRL 355
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 15/183 (8%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+QGL L A M +M+ PD T+ +LI CK G++ + ++ + + G
Sbjct: 269 LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY---------------AP 120
D TY +LI ++K EA RLL L D P Y
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG +G D+A F + K H PN +Y +I R G ++A EM +
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448
Query: 181 LTP 183
P
Sbjct: 449 FVP 451
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M + G P++ T+N++I+ CK + S+ G ++ T+ ++I + + G
Sbjct: 8 EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+ E +L + G+ P Y ++ G + G F A +E+ G PN YT
Sbjct: 68 RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+LI + G A + +M GL P R + + +G G D A ++
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++ G L+ A QM +MI + PD T++SLI+ +C+
Sbjct: 219 MVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M+ + + D TY LI A K G +++A L +++ G P Y
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+I G ++ + +A ++ P+ Y TLI C
Sbjct: 339 LINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENC 378
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 75/176 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF P + + L+ G G +E A ++ M+ +G PD+ +++++I ++ E
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M + D TY LI + + + EA + ++ P Y
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I + G + A E+ KG P+ Y LI + R EA L+++
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++L+ GL + A++++ K+ S P T+N+LIE C
Sbjct: 324 MIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCN--- 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+EF + L+ G++DEA ++ +++ H P ++Y
Sbjct: 381 IEF-----------------KSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNV 423
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
II G R G A+ + E+
Sbjct: 424 IIHGHCRIGNVLKAYKLYKEM 444
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%)
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
R + +G P Y +I G + + D+AF F + +KG PN + +I
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
R GR E + L+EM+ G P ++ + +G
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNG 97
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K F P + ++L++GL G L++A ++ N I +G D T+N++I +CK G
Sbjct: 396 MVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 455
Query: 61 VEFCVEMYYSVC-KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
E ++ + K G D +TY +I + G +++AF+ + +VE P
Sbjct: 456 FEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCN 515
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+++G R G A F+ KG + Y T+I+ + GRF EA + L EM E
Sbjct: 516 ILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEK 575
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
L P ++ + L + G+ + E
Sbjct: 576 KLGPDCYTYNAILCALADAGRMEAEE 601
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K F P + ++L++GL G L++A ++ N I +G D T+N++I +CK G
Sbjct: 290 MVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA-GMIDEAFRLLHNLVEDGHNPFPSLYA 119
E ++ + + D TY ++ A++ A G +++AF+ + +VE P
Sbjct: 350 FEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCN 409
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+++G G D+A F+ KG + Y T+I+ + GRF EA + L EM E
Sbjct: 410 ILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEK 469
Query: 180 -GLTPISRCFDLVTDG 194
GL P ++ + G
Sbjct: 470 NGLVPDQTTYNTIILG 485
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMI-KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+ ++ GL G E A ++ +M K G PD T+N++I C+ G+VE + +
Sbjct: 444 NTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMV 503
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ D+ T IL+ + + GM+ +A +L + + G Y II G + G+F+
Sbjct: 504 EKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFE 563
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+AF +E+K K P+ Y ++ GR +EA ++ ++
Sbjct: 564 EAFDLLAEMKEKKLGPDCYTYNAILCALADAGR-MEAEEFMSKI 606
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
V L +G + + +N++++ G P T+N++I C+ G+VE + + +
Sbjct: 236 VLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSF 295
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
D+ T IL+ + GM+D A +L + + G Y II G + G+F++AF
Sbjct: 296 KPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFD 355
Query: 137 FFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+E++ K P+ Y ++ + G+ +A + +M E P +++ GL
Sbjct: 356 LLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGL 415
Query: 196 KNCGKHDLAEKIEQLEVS 213
G D A K+ +S
Sbjct: 416 CTEGMLDNALKLFNTWIS 433
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 82/214 (38%), Gaps = 59/214 (27%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICK-SGEVEFCVE--MYYSVCKLG---------- 75
A Q+ N+M + P+L T N+LI + + + C+ ++ +V K G
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIG 213
Query: 76 --------SC-ADVSTYKILIPAVS--KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
SC D ++Y ++ + ++G D++ L+ L+E G P Y II G
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273
Query: 125 AFRRGQFDDAFCF-----------------------------------FSEIKIKGHPPN 149
R GQ + AF F F+ KG +
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
Y T+I+ + GRF EA + L EM E L P
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGP 367
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF L++ GY A +++ G +P+L F +IE +CK G
Sbjct: 231 MLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGS 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DGHNPFPSLYA 119
++ EM + G +V T+ LI + K G ++AFRL LV + H P Y
Sbjct: 291 IKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 350
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R + + A S +K +G PN YTTLI + G F A + + M+
Sbjct: 351 AMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSE 410
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G +P ++ + +GL C + + E + LE
Sbjct: 411 GFSPNLCTYNAIVNGL--CKRGRVQEAYKMLE 440
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G AG E A ++N M +G P+L T+N+++ +CK G
Sbjct: 372 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR 431
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +M + G D TY IL+ K I +A L + +++ G P Y
Sbjct: 432 VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTT 491
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R + ++ FF E G P YT++I R G A + +++ G
Sbjct: 492 LIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHG 551
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S + + GL K D A +
Sbjct: 552 CAPDSITYGAIISGLCKQSKRDEARSL 578
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +GF+P + + +V GL G ++ A +M+ + G PD T+N L+ CK
Sbjct: 407 MSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQEN 466
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + K+G D+ +Y LI + + E+ V G P Y
Sbjct: 467 IRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTS 526
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A FF + G P+ Y +I+ + + EA + M E G
Sbjct: 527 MICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKG 586
Query: 181 LTP 183
L P
Sbjct: 587 LVP 589
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ G L A+ ++++M +QG P+ T+ +LI+ CK+G E ++
Sbjct: 344 PNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 403
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G ++ TY ++ + K G + EA+++L + ++G P Y ++ +
Sbjct: 404 MNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCK 463
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A F+++ G P+ YTTLI + R R E+ + E +G+ P ++
Sbjct: 464 QENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKT 523
Query: 188 FDLVTDGLKNCGKHDLAEK 206
+ + G G LA K
Sbjct: 524 YTSMICGYCREGNLTLAMK 542
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 36/246 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P R + +++ G +E A+ + +M +G PD ++ ++ CK G
Sbjct: 161 MHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGN 220
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVS----------------------------- 91
+ + + + G D +T+ ++I S
Sbjct: 221 ILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTC 280
Query: 92 ------KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF-CFFSEIKIK 144
K G I +AF +L +V G P + +I G ++G + AF F ++ +
Sbjct: 281 MIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSE 340
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
H PN YT +I+ R + A L M E GL P + + + DG G + A
Sbjct: 341 NHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERA 400
Query: 205 EKIEQL 210
+ L
Sbjct: 401 YDLMNL 406
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ G L+ A +MV +M QG P+ T N +I+ + G VE+ ++ +C G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +Y++++ K G I EA + L ++E G + + II +G A
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+F + G PN +T +I + G +A L EM G P + DGL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + ++ GL AG+ + A ++++ M+ + P T+ L+ ++CK+G
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + Y LI +K+G + EA L +VE G+ P +
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G F+ A F E+ G PN YTT+I + GR A + M G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S + + DG G+ D A ++
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQL 457
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 1 MSDKGFNPPVRG-RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M GF PP R +V+ LL A ++ A+++ +M K G PD +N++I+ + K+G
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ +++ ++ TY IL+ ++ KAG ++ A L + G P +Y
Sbjct: 275 HAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYT 334
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ +A F E+ G+ P+ +T +I + G F +AA EM
Sbjct: 335 SLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG 394
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G P + + GL G+
Sbjct: 395 GCKPNVVTYTTIIQGLSKIGR 415
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 5/216 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF P L+ G +G ++ A + ++M++ G PD+ T +I+ +CKSG
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + + G +V TY +I +SK G + AFR++ ++ G P Y
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+A E+ PN +Y++L+ GG + + L E ++
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAA 500
Query: 181 ---LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P C +V GL G+ D A +I Q VS
Sbjct: 501 AETLDPGLCCSIIV--GLCKTGRLDEACRIFQRMVS 534
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNA--GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M +G P ++L+ GL + +E A +++ + K G PD T+ L +CK
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI 591
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GEV+ V+M G ADV Y L + G +D A L +V G P + Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
II G + + +DA FF E+ KG P YT L+ G EA + M
Sbjct: 652 CCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLA 711
Query: 179 MG-LTPISRCFDLVTDGLKNCGKHDLAEKI 207
G L +D + G K D A K+
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKL 741
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 2/191 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE--VEFCVEMYYSVCK 73
++ GL G L+ A ++ +M+ +G PD T+N LI +C+S E VE + + + K
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK 571
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+G D TY L + K G +D A ++L G N Y + G +GQ D
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ +G P+ Y +I + + +A + EM G P + +
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 194 GLKNCGKHDLA 204
L + G D A
Sbjct: 692 ALCHAGNVDEA 702
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M K P + +LV L AG E A ++ ++M+ G PD +++ T+ K+
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ E++ + K G D Y +I ++KAG EA ++L N++ P Y
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ + G + A F + G PN +YT+LI + GR EA + EM E
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK 206
G P ++ DGL G + A K
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAK 386
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 4/210 (1%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S +G+N V L GL G ++ A + +M++QG PD + +I + K ++
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKL 664
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL-YAP 120
E + + + G V+TY L+ A+ AG +DEAF +++ G + Y
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDA 724
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F ++ +G+ P +L R G+ +A L EM G
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + F + DGL+ K D + K+ +L
Sbjct: 785 SPPHAATFTAILDGLR---KSDESGKLLKL 811
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV L AG LE A+++ M G P+ + SLI KSG ++ ++ + +
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G DV T+ ++I + K+G ++A + ++ G P Y II+G + G+ +A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + G P+ Y L+ + GR EAA L E+ + +P + + + +G
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNG 479
Query: 195 LKNCG 199
L + G
Sbjct: 480 LCDGG 484
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 38/218 (17%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI----------------------- 52
L+ G G L+ A Q+++++ K S P+L+ ++SL+
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAA 500
Query: 53 -ETI------------CKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV--SKAGMID 97
ET+ CK+G ++ ++ + G D +TY ILI + S+ ++
Sbjct: 501 AETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVE 560
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
AF LLH+L + G+ P Y P+ G + G+ D A E +G + YT L
Sbjct: 561 RAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
T G+ A + EM G P + + + +GL
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF V + L+ L+ + +M+K G P+ +FN LI + ++ +
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPII 122
V + + K C D+ T+ IL+ + KAGM ++AF + H ++ G P +L+ ++
Sbjct: 174 VTCF-EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ + + +A F +++ G PP+ Y T+I + G EA L M
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + L G + AE++
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEEL 317
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V ++L+ G+ G L+ A + +N M G P++ T N ++ ++C +G
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 336
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V T+ ILI + + G++ A +L + G P Y P
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 396
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A + + +G P+ Y TL+T + G+ A L +++ G
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P+ ++ V DGL GK + A K+
Sbjct: 457 CSPVLITYNTVIDGLSKVGKTERAIKL 483
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V ++L+ L G L A ++ KM G P+ ++N L+ CK +
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + G D+ TY L+ A+ K G +D A +L+ L G +P Y
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A E++ KG P+ Y++L++ R G+ EA + ++ +G
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ + GL + D A
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRA 550
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G ++ A + ++ M+ +G PD+ T+N+L+ +CK G+V+
Sbjct: 386 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 445
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + G + TY +I +SK G + A +LL + G P Y+ ++ G
Sbjct: 446 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 505
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ D+A FF +++ G PN Y +++ + + A ++L M P
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 565
Query: 185 SRCFDLVTDGL 195
+ ++ +G+
Sbjct: 566 EATYTILIEGI 576
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + +++ L ++G L+ A +++++ +++ PD+ T+ LIE CK V +++
Sbjct: 214 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKL 273
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ GS DV TY +LI + K G +DEA + L+N+ G P + I++
Sbjct: 274 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCS 333
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G++ DA S++ KG P+ + LI R G A + L +M G TP S
Sbjct: 334 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 393
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEV 212
++ + G C + + IE L++
Sbjct: 394 YNPLLHGF--CKEKKMDRAIEYLDI 416
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G ++ A +++N++ +G P L T+N++I+ + K G+
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + G D+ TY L+ +S+ G +DEA + H+L G P Y
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q D A F + + K P YT LI G EA + L E+ G
Sbjct: 537 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596
Query: 181 LTPIS 185
L S
Sbjct: 597 LVKKS 601
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 34/228 (14%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE--------- 66
L++G G + A ++ + + G+ PD+ T+N LI CKSGE++ ++
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAP 214
Query: 67 -------MYYSVCKLGSCA----------------DVSTYKILIPAVSKAGMIDEAFRLL 103
+ ++C G DV TY ILI A K + +A +LL
Sbjct: 215 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLL 274
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ G P Y +I G + G+ D+A F + + G PN + ++
Sbjct: 275 DEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCST 334
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
GR+++A L +M G +P F+++ + L C + L I+ LE
Sbjct: 335 GRWMDAEKLLSDMLRKGCSPSVVTFNILINFL--CRQGLLGRAIDILE 380
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 32/223 (14%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
++ L+ G LE + + M+ +G PD+ SLI C+ G+ + + + + G+
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 77 CADVSTYKILIPAVSKAGMIDEAFR----------------LLHNLVEDG---------- 110
DV TY +LI K+G ID A + +L L + G
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 111 ----HNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+P + Y +I+ + A E++ KG P+ Y LI + G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R EA +L M G P +++ + + G+ AEK+
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 343
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY L+ + G + E LL +V +G +P +++
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + ++A FS+++ +G PN Y T+I + + GR +A Y +M + G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P S ++ + L K + AE++
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEEL 348
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 9/194 (4%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G + P V ++ G G L+ KM+ Q P++ T+NS+I +CK+
Sbjct: 77 MADDGGDCPPDVVSYSTVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKA 129
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
V+ +E+ ++ K G D TY ++ +G EA L + DG P Y
Sbjct: 130 QTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 189
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ +A F + +G P+ Y TL+ G VE L M
Sbjct: 190 NSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR 249
Query: 179 MGLTPISRCFDLVT 192
G+ P F ++
Sbjct: 250 NGIHPNHYVFSILV 263
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A +MI +G PD +NSLI ++C +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
E E++ + G C + +I + K G + E+ +L +V G P
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKP 394
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFC 136
DV +Y IL+ + EA LLH + +DG + P + Y+ +I G F+ G D
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML- 108
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ +I PN Y ++I + +A L M + G+ P ++ + G
Sbjct: 109 ---DQRIS---PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162
Query: 197 NCGK 200
+ G+
Sbjct: 163 SSGQ 166
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P +R + + + AG + + ++ +G PD+ +++ LI + K+G
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGF 597
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++Y++ + G D Y I K+G +++A++LL + G P Y
Sbjct: 598 ARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGS 657
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A+ F E K G N +Y++LI G+ GR EA + E+ + G
Sbjct: 658 VIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 717
Query: 181 LTPISRCFDLVTDGL 195
LTP ++ + D L
Sbjct: 718 LTPNVYTWNCLLDAL 732
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +GF P V +L+ GL+ AG+ ++ M +QG D +N+ I+ CKSG+
Sbjct: 573 IKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGK 632
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G V TY +I ++K +DEA+ L +G +Y+
Sbjct: 633 VNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSS 692
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A+ E+ KG PN + L+ + EA M +
Sbjct: 693 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLK 752
Query: 181 LTPISRCFDLVTDGL 195
TP + ++ +GL
Sbjct: 753 GTPNHITYSILINGL 767
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++ GL L+ A + + G + ++ ++SLI+ K G
Sbjct: 643 MKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G +V T+ L+ A+ KA I+EA N+ P Y+
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R +F+ AF F+ E++ +G PN YTT+I + G EA++ G
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822
Query: 181 LTPISRCFDLVTDGL 195
P S ++ + +GL
Sbjct: 823 GVPDSASYNAIIEGL 837
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + ++ L G L A + +M K+ + P+L T+N LI+ +CK+GEVE
Sbjct: 367 RGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEA 425
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ ++ + G +V T I+I + KA +DEA + + +P + +I
Sbjct: 426 AFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLID 485
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G+ DDA+ + ++ PN VYT+LI + GR + EM G +P
Sbjct: 486 GLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP 545
Query: 184 ISRCFDLVTDGLKNCGK 200
R + D + G+
Sbjct: 546 DLRLLNAYMDCVFKAGE 562
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V +++ G L++A ++++M D+ +N I+ K+G+
Sbjct: 224 MQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGK 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D TY +I + K +DEA + + ++ + P Y
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+FD+A+ K +G P+ Y ++T G+ GR EA EM +
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-D 402
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++++ D L G+ + A K+
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKV 429
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P + L+ + + L ++ M K P + +LI + E
Sbjct: 154 MSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQE 213
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + +LG V + +I ++ G +D A LL + + + LY
Sbjct: 214 SDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNV 273
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D A+ FF EIK G P+ YT++I + +G R EA +M +
Sbjct: 274 CIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNR 333
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ + G + GK D A
Sbjct: 334 NVPCAYAYNTMIMGYGSAGKFDEA 357
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++L+ L AG +E+A ++ + M + G P++ T N +I+ +CK+ +++ +
Sbjct: 405 PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSI 464
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + D T+ LI + K G +D+A+RL +++ P +Y +IK F+
Sbjct: 465 FEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFK 524
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +D F E+ +G P+ + + + G + E+ G P
Sbjct: 525 CGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMS 584
Query: 188 FDLVTDGLKNCG 199
+ ++ GL G
Sbjct: 585 YSILIHGLVKAG 596
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++++ L A L+ A + M + PD TF SLI+ + K G
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGR 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +Y + + Y LI + K G ++ ++ ++ G +P L
Sbjct: 493 VDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNA 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ F EIK +G P+ Y+ LI + G E M E G
Sbjct: 553 YMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG 612
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ DG GK + A ++
Sbjct: 613 CVLDTHAYNTFIDGFCKSGKVNKAYQL 639
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +++++G P++ T+N L++ + K+ E+ + + ++ L
Sbjct: 693 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLK 752
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + + ++AF + + G P Y +I G + G +A
Sbjct: 753 GTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEAS 812
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
F K G P+ Y +I R +EA + E T M
Sbjct: 813 SLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYK-IFEETRM 855
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ G +AG + A ++ + +G P + +N ++ + K G + +
Sbjct: 336 PCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRT 395
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K + ++STY +LI + KAG ++ AF++ + E G P +I +
Sbjct: 396 FEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCK 454
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ D+A F + K P+ + +LI G+ GR +A +M + P +
Sbjct: 455 AKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVV 514
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + CG+ + KI
Sbjct: 515 YTSLIKSFFKCGRKEDGHKI 534
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG P V + L+ L+ A + A M P+ T++ LI +C+ +
Sbjct: 713 LMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRK 772
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G + TY +I ++KAG I EA L +G P + Y
Sbjct: 773 FNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNA 832
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II+G + +A+ F E ++KG
Sbjct: 833 IIEGLSYSRRAMEAYKIFEETRMKG 857
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
E ++SL+ + K+ + ++ ++ + G T LI + K+ + E F L+
Sbjct: 129 EAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQC 188
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+ + P S Y +I + D F +++ G+ + ++TT+I + R GR
Sbjct: 189 MRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGR 248
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
A + L EM L +++ D GK D+A K
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWK 289
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++KG P ++L+ L+ A + + + ++ +G PD+ F + I CK G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE V+++ + + G +V T+ +I + G DEAF +VE G P Y+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R + DA+ E+ KG PPN VY LI G +A M G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+ S ++ + G G+ D AE++
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERL 422
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +++ G A E ++ ++M+ + P+ +N LI C+SG +
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + G + +TY LI +S ++EA L + +G P Y +I G
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ GQ C E+ K PN+ YT +I R G EA+ L EM E G+ P
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 185 S 185
S
Sbjct: 785 S 785
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + +LV+GL A + A ++ +M K+G P++ +N+LI++ ++G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G STY LI K G D A RLL ++ G N +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I FD A F E+ ++ P + TTLI+ + G+ +A + G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+R + + GL GK D A +I++
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQK 529
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ GL N +E A Q + + G PD+ T++ +I+ CK+
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E + + + Y LI A ++G + A L ++ G +P + Y
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + ++A F E++++G PN YT LI G+ G+ V+ L EM
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ G G A ++
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRL 772
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
+ +G P T N L+ ++ ++ E + C E + VCK G DV + I A K G
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGK 275
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++EA +L + E G P + +I G G++D+AF F ++ +G P Y+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L+ R R +A L EMT+ G P ++ + D G + A +I+ L VS
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF R + L+ GL AG L+ A ++ +++ +G D ++N+LI C +++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ K G D TY ILI + ++EA + + +G P Y+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + ++ FF E+ K PN VY LI R GR A +M G++
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 183 PISRCFDLVTDGL 195
P S + + G+
Sbjct: 678 PNSATYTSLIKGM 690
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G A ++ + + +G D T N+L+ +C++G+++ + + G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +Y LI +DEAF L +V+ G P Y+ +I G F + ++A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ + K G P+ Y+ +I C + R E + EM + P + ++ +
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 196 KNCGKHDLAEKIEQ 209
G+ +A ++ +
Sbjct: 656 CRSGRLSMALELRE 669
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G L+ A +++M+K+G PD T++ LI + +VE ++ + +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY ++I KA +E ++ P +Y +I+ R G+
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++K KG PN YT+LI R EA EM GL P + + D
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 194 GLKNCGK 200
G G+
Sbjct: 724 GYGKLGQ 730
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + ++ GL G + A KM+++G +P L T++ L++ + ++
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K G +V Y LI + +AG +++A + +V G + S Y
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + GQ D+A E+ G N+ +T++I + F A ++ EM
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++P + GL GKH A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKA 489
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KGF P V + L+ + AG L A ++ + M+ +G T+N+LI+ CK+G+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G + ++ +I + M D A R + ++ +P L
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 121 IIKGAFRR-----------------------------------GQFDDAFCFFSEIKIKG 145
+I G + G+ D+AF EI +G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+R Y TLI+ C + EA +L EM + GL P + + ++ GL N K
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P L++G+ +E AK + +M +G +P++ + +LI+ K G+
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + TY ++I ++ G + EA RLL+ + E G P Y
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 IIKGAFRRGQFDDAF 135
I G ++G +AF
Sbjct: 791 FIYGYLKQGGVLEAF 805
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A +M+N+M+ G P+ TF +LI+ CK+G+
Sbjct: 197 MHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGK 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + G D+ TY LI + + G + +A L+ ++ G P Y
Sbjct: 257 VDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + F + + + YT LI+ R GR +A L EM +G
Sbjct: 317 LIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + ++ + G A K+
Sbjct: 377 LKPDNGTYTMIMNEFCKTGDVKTASKL 403
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + ++L+ G + A+ + + + K P + +FN+L+ + G+++
Sbjct: 131 GYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEG 190
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +DEA +L+ ++++G P + +I G
Sbjct: 191 FRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDG 250
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ +G P+ Y TLI R G +A + + EM GL P
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ + DG +C + DL E
Sbjct: 311 KITYTTLIDG--SCKEGDLEITFE 332
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ QG PDL T+N+LI +C+ G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D TY LI K G ++ F L ++ + Y
Sbjct: 292 LGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ DA E+ G P+ YT ++ + G A+ L EM G
Sbjct: 352 LISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNG 411
Query: 181 LTP 183
P
Sbjct: 412 PVP 414
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y ++++ G P L FN L+ CK GE+ ++ ++ K
Sbjct: 107 VLEHLMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWS 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + G P Y+ +I G + + D+A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+E+ G PN +TTLI + G+ A +M G P ++ + GL
Sbjct: 227 EMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAEKIEQLE 211
C + DL + + +E
Sbjct: 287 --CRRGDLGQARDLVE 300
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G++ A Q K +T ++E + K Y + + G
Sbjct: 72 LMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ + IL+ K G + A + + + P + ++ G R G D+ F
Sbjct: 132 YPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + EA L EM + GL P F + DG
Sbjct: 192 RLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKIEQLEVS 213
GK DLA +I + +S
Sbjct: 252 CKNGKVDLAMEIYKQMLS 269
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G+ G LE A + +KM++ G P+ T+N+LI+ C G+
Sbjct: 234 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 293
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + K G VSTY +L+ A+ G + EA ++ + + G P Y
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 353
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF +E+ KG P YT+LI + R R EA + ++ + G
Sbjct: 354 LINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413
Query: 181 LTPISRCFDLVTDG 194
++P F+ + DG
Sbjct: 414 VSPDVIMFNAMIDG 427
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P V + ++ G + G +E A+++++ M +G +PD T+ SLI +CK G
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + ++G + TY LI G ++ AF +V+ G P S Y
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ F G+ +A E++ KG P+ Y LI R G A + EM G
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 181 LTP 183
+ P
Sbjct: 379 IEP 381
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +LLV L G + A M+ +M K+G PD T+N LI + G
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G TY LI +S+ + EA L +++ G +P ++
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G + AF E+ K PP+ + TL+ R G+ EA L EM G
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483
Query: 181 LTPISRCFDLVTDG 194
+ P ++ + G
Sbjct: 484 IKPDHISYNTLISG 497
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G G + A + N+M+ +G +P T+ SLI + +
Sbjct: 339 MRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G DV + +I G ++ AF LL + P +
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ ++A E+K +G P+ Y TLI+ GR G +A EM +G
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + L + DLAE++
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEEL 545
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L+ A++ + M G P++ ++N++I G +E + ++ G D TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI + K G ++EA L +VE G P Y +I G +G + AF + E+
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
KG P+ Y L+ GR EA + + EM + G+ P + ++++ +G CG
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G N G LE A ++M+K+G P + T+N L+ + G
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + K G D TY ILI S+ G AF L + ++ G P Y
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTS 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RR + +A F +I +G P+ ++ +I G A L EM
Sbjct: 389 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKS 448
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+ + G GK
Sbjct: 449 VPPDEVTFNTLMQGRCREGK 468
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ L ++ A + K++ QG PD+ FN++I+ C +G
Sbjct: 374 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGN 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + D T+ L+ + G ++EA LL + G P Y
Sbjct: 434 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNT 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G RRG DAF E+ G P Y LI + A L EM G
Sbjct: 494 LISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 553
Query: 181 LTPISRCFDLVTDGLKN 197
++P + + +G+ N
Sbjct: 554 ISPDDSTYLSLIEGMGN 570
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+G +P V + ++ G G +E A ++ +M ++ PD TFN+L++ C+ G+VE
Sbjct: 411 DQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 470
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + G D +Y LI + G I +AF + ++ G NP Y +I
Sbjct: 471 EARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALI 530
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
K + + D A E+ KG P+ Y +LI G VE
Sbjct: 531 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G G ++ A + ++M+ G +P L T+N+LI+ +CK+ E
Sbjct: 479 MKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQE 538
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
+ E+ + G D STY LI + + E
Sbjct: 539 GDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + +V GL AG +E A++M ++M ++G PD ++N+L+ CK+G
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + G DV T+ LI A+ +AG ++ A L+ + E G +
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G DDA E++ P+ Y LI + GR EA + EM G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + + G G D A ++ +
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNR 424
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + LV AG +++A+++V M + G P L TFN+++ +CK+G
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +M+ + + G D +Y L+ KAG + EA + + + G P +
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G + A +++ +G N +T LI R G +A + EM E
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
+ P C++++ +G G+ D A E I ++E
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEME 392
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + + ++ L +A L SA++++ M++ G P++ T+N L+ +C G+ E
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + CA +V TY L+ A +AG +D A RL+ + E G P + ++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ +DA F E+ +G P+ Y TL++ + G EA EM + G+ P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 184 ISRCFDLVT 192
D+VT
Sbjct: 294 -----DVVT 297
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 35/229 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + LV G AG L A + +M ++G PD+ TF SLI +C++G
Sbjct: 251 MAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGN 310
Query: 61 VEFCV--------------EMYYSVCKLGSCAD---------------------VSTYKI 85
+E V E ++ G C + V Y +
Sbjct: 311 LERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNV 370
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI K G +DEA L+H + G P Y+ I+ G + G D AF ++ KG
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
P+ Y++LI R +A +M ++GL P + + DG
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDG 479
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++L+ G G ++ A++++++M +G PD+ T+++++ CK G+
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGD 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + K G D TY LI + + + +A L +++ G P Y
Sbjct: 416 TDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTT 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + G A E+ KG P+ Y+ LI + R EA L ++
Sbjct: 476 LIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G+L+ A + +M + P + +N LI CK G ++ E+ + + G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY ++ K G D AF L +++ G P Y+ +I+G + DA
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ G P+ YTTLI + G +A + EM + G+ P + ++ DGL
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515
Query: 196 KNCGKHDLAEKI 207
+ A+++
Sbjct: 516 SKSARTKEAQRL 527
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L++GL L A ++ KM++ G PD T+ +LI+ CK G
Sbjct: 426 MLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
V+ + ++ + K G DV TY +LI +SK+ EA RLL L + P
Sbjct: 486 VQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEA 545
Query: 114 ---------FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
F S+ A ++KG +G + A + + + + VY+ LI RGG
Sbjct: 546 LMHCCRTAEFKSVVA-LLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGG 604
Query: 165 RFVEAANYLMEMTEMGLTPIS 185
++A ++ ++ G +P S
Sbjct: 605 NIMKALSFHKQLLRCGFSPNS 625
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++ G G +SA ++ KM+K+G PD T++SLI +C+
Sbjct: 391 MEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERR 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + +LG D TY LI K G + +A L +++ G P Y+
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSV 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+I G + + +A ++ + P+ Y L+ C
Sbjct: 511 LIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCC 550
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + ++ GL AG+ + A ++++ M+ + P T+ L+ ++CK+G
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + Y LI +K+G + EA L +VE G+ P +
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G F+ A F E+ G PN YTT+I + GR A + M G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S + + DG G+ D A ++
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQL 457
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 1 MSDKGFNPPVRG-RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M GF PP R +V+ LL A ++ A+++ +M K G PD +N++I+ + K+G
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ +++ ++ TY IL+ ++ KAG ++ A L + G P +Y
Sbjct: 275 HAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYT 334
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ +A F E+ G+ P+ +T +I + G F +AA EM
Sbjct: 335 SLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG 394
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G P + + GL G+
Sbjct: 395 GCKPNVVTYTTIIQGLSKIGR 415
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF P L+ G +G ++ A + ++M++ G PD+ T +I+ +CKSG
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + + G +V TY +I +SK G + AFR++ ++ G P Y
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+A E+ PN +Y++L+ GG + L E ++
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA 500
Query: 181 ---LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P C +V GL G+ D A +I Q VS
Sbjct: 501 AENLDPGLCCSIIV--GLCKTGRLDEACRIFQRMVS 534
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 2/191 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE--VEFCVEMYYSVCK 73
++ GL G L+ A ++ +M+ +G PD T+N LI +C+S E VE + + +
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+G D TY L + K G +D A ++L G N Y + G +GQ D
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ +G P+ Y +I +G + +A + EM G P + +
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 194 GLKNCGKHDLA 204
L + G D A
Sbjct: 692 ALCHAGNVDEA 702
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M K P + +LV L AG E A ++ ++M+ G PD +++ T+ K+
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ E++ + K G D Y +I ++KAG EA ++L N++ P Y
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ + G + A F + G PN +YT+LI + GR EA + EM E
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK 206
G P ++ DGL G + A K
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAK 386
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNA--GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M +G P ++L+ GL + +E A +++ + G PD T+ L +CK
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI 591
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GEV+ V+M G ADV Y L + G +D A L +V G P + Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
II G + + +DA FF E+ KG P YT L+ G EA + M
Sbjct: 652 CCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLA 711
Query: 179 MG-LTPISRCFDLVTDGLKNCGKHDLAEKI 207
G L +D + G K D A K+
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKL 741
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S +G+N V L GL G ++ A + +M++QG PD + +I + K ++
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL-YAP 120
E + + + G V+TY L+ A+ AG +DEAF ++ G + Y
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDA 724
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F ++ +G+ P +L R G+ +A L EM G
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + F + DGL+ K D + K+ +L
Sbjct: 785 SPPHAATFTAILDGLR---KSDESGKLLKL 811
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV L AG LE A+++ M G P+ + SLI KSG ++ ++ + +
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G DV T+ ++I + K+G ++A + ++ G P Y II+G + G+ +A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + G P+ Y L+ + GR EAA L E+ + +P + + + G
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKG 479
Query: 195 LKNCG 199
L + G
Sbjct: 480 LCDGG 484
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMV---NKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+P ++ LV+GL + G +E+ + +K + DP L S+I +CK+G ++
Sbjct: 467 SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTGRLDE 524
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAV--SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++ + G D +TY ILI + S+ ++ AF LLH+L G+ P Y P+
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPL 584
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
G + G+ D A E +G + YT L T G+ A + EM G
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 182 TPISRCFDLVTDGL 195
P + + + +GL
Sbjct: 645 APDAAAYCCIINGL 658
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF V + L+ L+ + +M+K G P+ +FN LI + ++ +
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPII 122
V + + K C D+ T+ IL+ + KAGM ++AF + H ++ G P +L+ ++
Sbjct: 174 VTCF-EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ + + +A F +++ G PP+ Y T+I + G EA L M
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + L G + AE++
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEEL 317
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P+ L ++ L +G LE A +++++ + S D T+ +L+ + + G E
Sbjct: 856 GYTIPL-SYSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEA 914
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ S+ + G V Y LI K I++A ++ + +DG P Y+ +I+G
Sbjct: 915 LAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRG 974
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ DDA+ + +K+KG P+ Y+ I+ + G+ EA L M E G+ P
Sbjct: 975 YMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVPS 1034
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ F V GL GK+DLA + Q +++L+S
Sbjct: 1035 TINFRTVFFGLNCEGKNDLARTVMQQKLALKS 1066
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 3/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLL--NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M D G+ P L+ L ++ A ++ ++MI+ PD E + + +C++
Sbjct: 780 MKDNGYIPNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEA 839
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G + + S+C++G +S Y + I A+ ++G ++EA LL + + Y
Sbjct: 840 GRLSEARKSTDSLCRIGYTIPLS-YSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTY 898
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G R+G+ ++A +K G P VYT+LI + + +A +M +
Sbjct: 899 GTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQ 958
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + + G N + D A +
Sbjct: 959 DGCEPTVVTYSALIRGYMNMERADDAWSV 987
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 1/180 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG + A +++ + + D E +L++ +C+ + VE+ + K + D
Sbjct: 363 AGKIREALELIRDLKNKDILIDYEYLGTLVKGLCRGDRITDAVEIV-EIMKKRNLIDAKI 421
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y I+I + + +A L + E G P S Y +++ F Q+D F F+E+
Sbjct: 422 YGIIINGYLRKKDLSKAIELFQRMKESGIQPITSTYTELMQCLFNLNQYDKGFELFNEML 481
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G + ++ R EA M + G P + + + L + D
Sbjct: 482 ERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTMKDKGANPTWKSYSIFIKELCRVSRTD 541
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +L+ A + A KM G +PD + + ++ ++C +G+
Sbjct: 236 MEKNSCEKDIKTWSILISQFGKAKLIGKALLFFEKMKTSGCEPDEKIYKMMVHSLCNAGK 295
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + Y + + D+S YKIL+ +++K+G + + +++ P +
Sbjct: 296 GEVALAFYKEMVQKDMRLDLSLYKILLISMAKSGDVGAVHLVANDMSRLSQIPEHDVNVC 355
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+K G+ +A ++K K + TL+ RG R +A + M +
Sbjct: 356 ILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGLCRGDRITDAVEIVEIMKKRN 415
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L ++ + ++ +G K DL++ IE
Sbjct: 416 LID-AKIYGIIINGY--LRKKDLSKAIE 440
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 1/202 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++V L NAG E A +M+++ DL + L+ ++ KSG+
Sbjct: 271 MKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKILLISMAKSGD 330
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + +L + ++ + AG I EA L+ +L
Sbjct: 331 VGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYLGT 390
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R + DA EI K + + +Y +I R +A M E G
Sbjct: 391 LVKGLCRGDRITDAVEIV-EIMKKRNLIDAKIYGIIINGYLRKKDLSKAIELFQRMKESG 449
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+ PI+ + + L N ++D
Sbjct: 450 IQPITSTYTELMQCLFNLNQYD 471
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
ET+N ++ + + + ++Y + + G T+ I+I + G+ + + +
Sbjct: 720 ETYNMAMKISGREKDFKHMRSLFYEMRRKGCLITPDTWAIMIMQYGRTGLTEISLKTFTE 779
Query: 106 LVEDGHNPFPSLYA-PIIKGAFRRG-QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ ++G+ P S Y +I ++G + D+A F E+ + P+R V T ++
Sbjct: 780 MKDNGYIPNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEA 839
Query: 164 GRFVEAANYLMEMTEMGLT-PIS 185
GR EA + +G T P+S
Sbjct: 840 GRLSEARKSTDSLCRIGYTIPLS 862
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L++G +N + A ++N + +G PD +T++ I +CK+G+
Sbjct: 956 MQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGK 1015
Query: 61 VEFCVEM 67
E +++
Sbjct: 1016 SEEALQL 1022
>gi|341605685|gb|AEK82945.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G Y+ ++ G + G+ ++A +F G N
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 123
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D L GK B A
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEA 176
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 8 MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV TY +++ + K G ++EA +G Y+
Sbjct: 68 VEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 127
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMXLFKRMEE 185
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
CV +Y + + G + ++I + K G ++E + + N++ G P ++Y +I
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +DA + +G + Y+ ++ + GR EA +Y GL
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAI 120
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S + + DGL G+ D AE++
Sbjct: 121 NSMFYSSLIDGLGKAGRIDEAERL 144
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G D+ T++ ++ +CK+G
Sbjct: 43 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGR 102
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 103 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 162
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A++K G +BEA L + E+G + Y +I G F+
Sbjct: 163 LIDALTKHGKVBEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++KG P ++L+ L+ A + + + ++ +G PD+ F + I CK G+
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 288
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE V+++ + + G +V T+ +I + G DEAF +VE G P Y+
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R + DA+ E+ KG PPN VY LI G +A M G
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+ S ++ + G G+ D AE++
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERL 435
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +++ G A E ++ ++M+ + P+ +N LI C+SG +
Sbjct: 618 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 677
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + G + +TY LI +S ++EA L + +G P Y +I G
Sbjct: 678 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 737
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ GQ C E+ K PN+ YT +I R G EA+ L EM E G+ P
Sbjct: 738 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 797
Query: 185 S 185
S
Sbjct: 798 S 798
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + +LV+GL A + A ++ +M K+G P++ +N+LI++ ++G
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G STY LI K G D A RLL ++ G N +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I FD A F E+ ++ P + TTLI+ + G+ +A + G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+R + + GL GK D A +I++
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQK 542
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ GL N +E A Q + + G PD+ T++ +I+ CK+
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E + + + Y LI A ++G + A L ++ G +P + Y
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + ++A F E++++G PN YT LI G+ G+ V+ L EM
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 758
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ G G A ++
Sbjct: 759 VHPNKITYTVMIGGYARDGNVTEASRL 785
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
+ +G P T N L+ ++ ++ E + C E + VCK G DV + I A K G
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGK 288
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++EA +L + E G P + +I G G++D+AF F ++ +G P Y+
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L+ R R +A L EMT+ G P ++ + D G + A +I+ L VS
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KGF R + L+ GL AG L+ A ++ +++ +G D ++N+LI C +++
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ K G D TY ILI + ++EA + + +G P Y+ +I
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + ++ FF E+ K PN VY LI R GR A +M G++
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 183 PISRCFDLVTDGL 195
P S + + G+
Sbjct: 691 PNSATYTSLIKGM 703
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G A ++ + + +G D T N+L+ +C++G+++ + + G
Sbjct: 489 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +Y LI +DEAF L +V+ G P Y+ +I G F + ++A
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 608
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ + K G P+ Y+ +I C + R E + EM + P + ++ +
Sbjct: 609 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 668
Query: 196 KNCGKHDLAEKIEQ 209
G+ +A ++ +
Sbjct: 669 CRSGRLSMALELRE 682
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G L+ A +++M+K+G PD T++ LI + +VE ++ + +
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY ++I KA +E ++ P +Y +I+ R G+
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++K KG PN YT+LI R EA EM GL P + + D
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Query: 194 GLKNCGK 200
G G+
Sbjct: 737 GYGKLGQ 743
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + ++ GL G + A KM+++G +P L T++ L++ + ++
Sbjct: 299 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K G +V Y LI + +AG +++A + +V G + S Y
Sbjct: 359 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 418
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + GQ D+A E+ G N+ +T++I + F A ++ EM
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++P + GL GKH A
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKA 502
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KGF P V + L+ + AG L A ++ + M+ +G T+N+LI+ CK+G+
Sbjct: 369 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G + ++ +I + M D A R + ++ +P L
Sbjct: 429 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 488
Query: 121 IIKGAFRR-----------------------------------GQFDDAFCFFSEIKIKG 145
+I G + G+ D+AF EI +G
Sbjct: 489 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+R Y TLI+ C + EA +L EM + GL P + + ++ GL N K
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P L++G+ +E AK + +M +G +P++ + +LI+ K G+
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + TY ++I ++ G + EA RLL+ + E G P Y
Sbjct: 744 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 803
Query: 121 IIKGAFRRGQFDDAF 135
I G ++G +AF
Sbjct: 804 FIYGYLKQGGVLEAF 818
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V ++L+ G+ G L+ A + +N M G P++ T N ++ ++C +G
Sbjct: 108 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 167
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V T+ ILI + + G++ A +L + G P Y P
Sbjct: 168 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 227
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A + + +G P+ Y TL+T + G+ A L +++ G
Sbjct: 228 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 287
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P+ ++ V DGL GK + A K+
Sbjct: 288 CSPVLITYNTVIDGLSKVGKTERAIKL 314
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V ++L+ L G L A ++ KM G P+ ++N L+ CK +
Sbjct: 178 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + G D+ TY L+ A+ K G +D A +L+ L G +P Y
Sbjct: 238 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 297
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A E++ KG P+ Y++L++ R G+ EA + ++ +G
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ + GL + D A
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRA 381
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A + ++ M+ +G PD+ T+N+L+ +CK G+
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ VE+ + G + TY +I +SK G + A +LL + G P Y+
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 332
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ D+A FF +++ G PN Y +++ + + A ++L M
Sbjct: 333 LVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 392
Query: 181 LTPISRCFDLVTDGL 195
P + ++ +G+
Sbjct: 393 CKPTEATYTILIEGI 407
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G ++ A +++N++ +G P L T+N++I+ + K G+
Sbjct: 248 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 307
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + G D+ TY L+ +S+ G +DEA + H+L G P Y
Sbjct: 308 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 367
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q D A F + + K P YT LI G EA + L E+ G
Sbjct: 368 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427
Query: 181 LTPIS 185
L S
Sbjct: 428 LVKKS 432
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
L F+ ++T CK V +++ + GS DV TY +LI + K G +DEA + L+
Sbjct: 82 LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
N+ G P + I++ G++ DA S++ KG P+ + LI R G
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
A + L +M G TP S ++ + G C + + IE L++
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGF--CKEKKMDRAIEYLDI 247
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
C +S + + K + +A +LL + G P Y +I G + G+ D+A
Sbjct: 79 CFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 138
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
F + + G PN + ++ GR+++A L +M G +P F+++ + L
Sbjct: 139 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL- 197
Query: 197 NCGKHDLAEKIEQLE 211
C + L I+ LE
Sbjct: 198 -CRQGLLGRAIDILE 211
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D GF P + L+ G L+ G + QM+ +M +G PD T+ SL+ +CK+G
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ S+ + G VSTY ILI + G + E L +VE+G +P ++
Sbjct: 320 CREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNI 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G D A F++++ G PN Y LI + GR +A +M G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+TP F+ + GL K + AE++
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEEL 466
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + LV GL E A+++V +M+ QG P+ FN+LI +C G
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + +G D +Y LI G DEA ++ +V G +P Y
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + DDA+C F E+ KG P Y T++ + RF EA + M G
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614
Query: 181 LTPISRCFDLVTDGL--KNC 198
++++ +GL NC
Sbjct: 615 TKCDIYTYNIILNGLCKSNC 634
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ L G ++ A+ N+MI +G P++ FNSL+ +C +
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ Y + G C + + LI + G + E RL+ + G P Y P
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A F + G P Y TL+ R +A EM G
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579
Query: 181 LTPISRCFDLVTDGL 195
+TP ++ + GL
Sbjct: 580 VTPGVVTYNTILHGL 594
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL AK++ MI G+ D+ T+N ++ +CKS
Sbjct: 575 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 634
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +M+ S+C G ++ T+ I+I A+ K G ++A L + +G P Y
Sbjct: 635 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRL 694
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G ++ FS ++ G PN + L+ G A YL ++ E
Sbjct: 695 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 754
Query: 181 LT 182
+
Sbjct: 755 FS 756
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G L ++ M++ G PD FN K G
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + + G +V Y LI A+ K G +D+A + ++ +G P ++
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +++ A E+ +G PN + TLI GR +E + M +G
Sbjct: 450 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + + G G+ D AEK+
Sbjct: 510 VRPDAFSYTPLISGYCLTGRTDEAEKV 536
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++ GL A + A+ + +MI G P+ T+N LI G+
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V+M + G D TY L+ + K G EA +++ G P S Y
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G + F + G P+ ++ + + G +A + +M + G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE-KIEQL 210
L+P + + D L G+ D AE K Q+
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 7/214 (3%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
SDK P + +L+ G+LE ++K G D N L++ +C V
Sbjct: 83 SDK-VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRV 141
Query: 62 EFCVE-MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSL-- 117
++ + + +LG D +Y IL+ + +EA LLH + +D G P++
Sbjct: 142 GEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVS 201
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y+ +I G F GQ D + F E+ +G PP+ YTT+I + F A +M
Sbjct: 202 YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ G P + ++ + G + GK E ++ LE
Sbjct: 262 DNGFKPNNYTYNCLIHGYLSIGK--WKEVVQMLE 293
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + L+ G +A ++ A + +M+++G P + T+N+++ + ++
Sbjct: 540 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 599
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y ++ G+ D+ TY I++ + K+ +DEAF++ +L G +
Sbjct: 600 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 659
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +DA F+ I G PN Y + G E + M + G
Sbjct: 660 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 719
Query: 181 LTPISRCFDLVTDGLKNCG 199
P S+ + + L + G
Sbjct: 720 TAPNSQMLNALVRRLLHRG 738
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 3/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD---PDLETFNSLIETICK 57
M + G P +L++GL N E A ++++ M P++ +++ +I
Sbjct: 152 MPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+V+ ++ + G DV TY +I + KA + D A + ++++G P
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G G++ + E+ +G P+ Y +L+ + GR EA + M
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331
Query: 178 EMGLTPISRCFDLVTDGLKNCG 199
G+ P + ++ G G
Sbjct: 332 RKGIKPKVSTYGILIHGYATKG 353
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G G + A+++ + M+ G P T+N+L+ C +
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G V TY ++ + + EA L N++ G Y
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + D+AF F + KG N +T +I +GGR +A + + G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 181 LTPISRCFDLVTDGL 195
L P + LV + L
Sbjct: 685 LVPNVVTYRLVAENL 699
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 73 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 132
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY L+ + G + E LL +V +G +P +++
Sbjct: 133 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 192
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + ++A FS+++ +G PN Y T+I + + GR +A Y +M + G
Sbjct: 193 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 252
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P S ++ + L K + AE++
Sbjct: 253 LRPDSIVYNSLIHSLCIFDKWEKAEEL 279
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G + P V ++ G G L+ N+M+ + P++ T+NS+I +CK+
Sbjct: 1 MADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKA 60
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
V+ +E+ ++ K G D TY ++ +G EA L + DG P Y
Sbjct: 61 QTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 120
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ +A F + +G P+ Y TL+ G VE L M
Sbjct: 121 NSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR 180
Query: 179 MGLTPISRCFDLVT 192
G+ P F ++
Sbjct: 181 NGIHPNHYVFSILV 194
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A +MI +G PD +NSLI ++C +
Sbjct: 213 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 272
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
E E++ + G C + +I + K G + E+ +L +V G P
Sbjct: 273 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKP 325
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++++ GL ++ A + +M + +PD+ T+N LI+ +CK G+
Sbjct: 243 MVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGK 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + +G D+ TY L+ A+ K +D+A L+ + + G P Y
Sbjct: 303 ISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTT 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +DA+ F EI +G+ Y +I + G F EA L M +
Sbjct: 363 LIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNA 422
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + ++ + L G+
Sbjct: 423 CIPDAVSYETIIYALSEKGE 442
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 89/182 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V ++L+ GL G + ++ ++V++M G D+ T+NSL+ +CK+
Sbjct: 278 MHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHH 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G +V TY LI + K G +++A+ + ++ +G++ Y
Sbjct: 338 LDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNV 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G FD+A S ++ P+ Y T+I G V+ L M G
Sbjct: 398 MINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRG 457
Query: 181 LT 182
L+
Sbjct: 458 LS 459
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++ G + A + N M+++G +P++ +N +I +CK
Sbjct: 208 MMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKR 267
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + DV TY ILI + K G I + L+ + G Y
Sbjct: 268 VDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNS 327
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + D A EIK +G PN YTTLI + GR +A E+ G
Sbjct: 328 LLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEG 387
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++++ +GL G D A
Sbjct: 388 YHITVWTYNVMINGLCKKGLFDEA 411
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 3/196 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF +L+ GL G +A QM+ K + D+ ++++I+++CK V
Sbjct: 110 GFKLDQVSYAILMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTDA 166
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+Y + G +V T+ IL+ A+ K +A LL +++ G P Y I+ G
Sbjct: 167 YRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDG 226
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
Q + A F+ + +G PN Y +I + R EA N EM + P
Sbjct: 227 YCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPD 286
Query: 185 SRCFDLVTDGLKNCGK 200
++++ DGL GK
Sbjct: 287 VVTYNILIDGLCKLGK 302
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
N V ++ L ++ A ++ ++MI +G P++ TF+ L++ +CK + + +
Sbjct: 144 NADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMN 203
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + K G +V TY ++ +++A + + +V++G P Y II G
Sbjct: 204 LLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLC 263
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
++ + D+A F E+ K P+ Y LI + G+ + + EM +G T
Sbjct: 264 KKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDII 323
Query: 187 CFDLVTDGLKNCGKHDLAEKI 207
++ + L C H L + I
Sbjct: 324 TYNSLLHAL--CKNHHLDQAI 342
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +LV L + A ++ M+K+G P++ T+ ++++ C +
Sbjct: 173 MIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQ 232
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + + G +V Y I+I + K +DEA L + NP Y
Sbjct: 233 VNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNI 292
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + E++ G + Y +L+ + +A + E+ + G
Sbjct: 293 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 352
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + + DGL G+ + A I Q
Sbjct: 353 IQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + +L+ + G + ++ K++K G +P+ TF +LI+ +C +G+
Sbjct: 40 GIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEA 99
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + V G D +Y IL+ + K G A ++L + N +Y+ II
Sbjct: 100 LLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDS 156
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ DA+ +SE+ KG PN ++ L+ + + +A N L M + G+ P
Sbjct: 157 LCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPN 216
Query: 185 SRCFDLVTDG 194
+ + DG
Sbjct: 217 VVTYGAIMDG 226
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M++ P + FN ++ ++ K + ++ + G + T IL+ G
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
I F +L +++ G+ P + +IKG GQ +A F + G ++ Y
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 156 LIT-MCGRG 163
L+ +C G
Sbjct: 121 LMNGLCKMG 129
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V L+ GL N G + +M+ +MI + PD+ TF++LI+ K G+
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y + G D TY LI K + EA ++ +V G P Y+
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 419
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + DD F EI KG PN Y TL+ + G+ A EM G
Sbjct: 420 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 479
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + ++ DGL C +L + +E E
Sbjct: 480 VPPSVVTYGILLDGL--CDNGELNKALEIFE 508
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P + LV G +G L +AK++ +M+ +G P + T+ L++ +C +GE
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 499
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + K + Y I+I + A +D+A+ L +L + G P Y
Sbjct: 500 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 559
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F ++K G P+ Y LI G + + + EM G
Sbjct: 560 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 619
Query: 181 LTPISRCFDLVTDGLKN 197
+ S +V D L +
Sbjct: 620 FSADSSTIKMVIDMLSD 636
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L+ + G L AK++ N+MI +G PD T+NSLI+ CK
Sbjct: 335 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 394
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M+ + G D+ TY ILI + KA +D+ RL + G P Y
Sbjct: 395 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + A F E+ +G PP+ Y L+ G +A +M +
Sbjct: 455 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+T ++++ G+ N K D A
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDA 538
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 2/185 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G + A ++++M++ G PD T+ ++ +CKSG ++++ + +
Sbjct: 210 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 269
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A V Y I+I ++ K G D+A L + + G Y+ +I G G++DD
Sbjct: 270 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 329
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ + P+ ++ LI + + G+ +EA EM G+ P + ++ + DG
Sbjct: 330 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 389
Query: 196 --KNC 198
+NC
Sbjct: 390 CKENC 394
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +L+ A ++ ++ ++ +G P+ T+N+L+ C+SG+
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G V TY IL+ + G +++A + + + +Y
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA+ F + KG P+ Y +I + G EA +M E G
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584
Query: 181 LTPISRCFD-LVTDGLKNCGKHDLAEKIEQLEV 212
TP ++ L+ L G E IE+++V
Sbjct: 585 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 617
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P LV G G + A +V++M++ PDL T ++LI +C G V
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G D TY ++ + K+G A L + E Y+ +I
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G FDDA F+E+++KG + Y++LI G++ + A L EM + P
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343
Query: 185 SRCFDLVTDGLKNCGK 200
F + D GK
Sbjct: 344 VVTFSALIDVFVKEGK 359
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ V +++ L G + A + N+M +G D+ T++SLI +C G+
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + DV T+ LI K G + EA L + ++ G P Y
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +A F + KG P+ Y+ LI + R + E++ G
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + ++ + G GK + A+++ Q VS
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 477
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P ++ L +G A + KM ++ + ++ +I+++CK G
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ + ++ + G ADV TY LI + G D+ ++L ++ G N P + +
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIPDVVTF 347
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+ +I + G+ +A ++E+ +G P+ Y +LI
Sbjct: 348 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 386
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 63/166 (37%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G + D+ T +I C+ ++ F + KLG D T+ L+ G + E
Sbjct: 128 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 187
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A L+ +VE P + +I G +G+ +A + G P+ Y ++
Sbjct: 188 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 247
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ G A + +M E + + +V D L G D A
Sbjct: 248 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 293
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY L+ + G + E LL +V +G +P +++
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + ++A FS+++ +G PN Y T+I + + GR +A Y +M + G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P S ++ + L K + AE++
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEEL 348
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 9/194 (4%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G + P V ++ G G L+ KM+ Q P++ T+NS+I +CK+
Sbjct: 77 MADDGGDCPPDVVSYSTVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKA 129
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
V+ +E+ ++ K G D TY ++ +G EA L + DG P Y
Sbjct: 130 QTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 189
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ +A F + +G P+ Y TL+ G VE L M
Sbjct: 190 NSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR 249
Query: 179 MGLTPISRCFDLVT 192
G+ P F ++
Sbjct: 250 NGIHPNHYVFSILV 263
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 75/200 (37%), Gaps = 10/200 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A +MI +G PD +NSLI ++C +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E++ + G C + +I + K G + E+ +L +V G P
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKP------- 394
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
G+ D+A F G PN Y + G E + M + G
Sbjct: 395 ---DIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 451
Query: 181 LTPISRCFDLVTDGLKNCGK 200
T S + + L G+
Sbjct: 452 CTVDSGMLNFIVRELLQRGE 471
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFC 136
DV +Y IL+ + EA LLH + +DG + P + Y+ +I G F+ G D
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML- 108
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ +I PN Y ++I + +A L M + G+ P ++ + G
Sbjct: 109 ---DQRIS---PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162
Query: 197 NCGK 200
+ G+
Sbjct: 163 SSGQ 166
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V L+ GL N G + +M+ +MI + PD+ TF++LI+ K G+
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y + G D TY LI K + EA ++ +V G P Y+
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + DD F EI KG PN Y TL+ + G+ A EM G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + ++ DGL C +L + +E E
Sbjct: 451 VPPSVVTYGILLDGL--CDNGELNKALEIFE 479
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P + LV G +G L +AK++ +M+ +G P + T+ L++ +C +GE
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + K + Y I+I + A +D+A+ L +L + G P Y
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F ++K G P+ Y LI G + + + EM G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 181 LTPISRCFDLVTDGLKN 197
+ S +V D L +
Sbjct: 591 FSADSSTIKMVIDMLSD 607
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L+ + G L AK++ N+MI +G PD T+NSLI+ CK
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M+ + G D+ TY ILI + KA +D+ RL + G P Y
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + A F E+ +G PP+ Y L+ G +A +M +
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+T ++++ G+ N K D A
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDA 509
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 2/185 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G + A ++++M++ G PD T+ ++ +CKSG ++++ + +
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A V Y I+I ++ K G D+A L + + G Y+ +I G G++DD
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ + P+ ++ LI + + G+ +EA EM G+ P + ++ + DG
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 196 --KNC 198
+NC
Sbjct: 361 CKENC 365
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +L+ A ++ ++ ++ +G P+ T+N+L+ C+SG+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G V TY IL+ + G +++A + + + +Y
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA+ F + KG P+ Y +I + G EA +M E G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 181 LTPISRCFD-LVTDGLKNCGKHDLAEKIEQLEV 212
TP ++ L+ L G E IE+++V
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P LV G G + A +V++M++ PDL T ++LI +C G V
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G D TY ++ + K+G A L + E Y+ +I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G FDDA F+E+++KG + Y++LI G++ + A L EM + P
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 185 SRCFDLVTDGLKNCGK 200
F + D GK
Sbjct: 315 VVTFSALIDVFVKEGK 330
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ V +++ L G + A + N+M +G D+ T++SLI +C G+
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + DV T+ LI K G + EA L + ++ G P Y
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +A F + KG P+ Y+ LI + R + E++ G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + ++ + G GK + A+++ Q VS
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P ++ L +G A + KM ++ + ++ +I+++CK G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ + ++ + G ADV TY LI + G D+ ++L ++ G N P + +
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIPDVVTF 318
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+ +I + G+ +A ++E+ +G P+ Y +LI
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 63/166 (37%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G + D+ T +I C+ ++ F + KLG D T+ L+ G + E
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A L+ +VE P + +I G +G+ +A + G P+ Y ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ G A + +M E + + +V D L G D A
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P R L+ G G + A +++++MI G P + T+N+L+ C G
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + + G DV +Y +I + + +AF++ +VE G P Y+
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + + +AF F E+ +G PP+ YT+LI G +A EM + G
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + ++ +GL + +A+++
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRL 579
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V +++++G+++ G LE + KM K+G P++ T+N+LI+ CK +
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + ++ G A++ +Y +I + G + E L+ + G P Y
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G SE+ KG PN YTTLI + G A +M G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P R + + DG G + A K+
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKV 404
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + LV G G L ++++M+ +G P++ T+ +LI +CK+G
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE++ + G + TY LI + G+++EA+++L ++ G +P Y
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +A + +G PP+ Y+T+I R +A EM E G
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P + + + GL C + L E + +R
Sbjct: 483 VLPDTVTYSSLIQGL--CLQQKLVEAFDLFREMMR 515
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ + AG L A ++ ++M +G P+ T+ +LI+ C+ G
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G V TY L+ G + EA +L +VE G P Y+
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + AF E+ KG P+ Y++LI + VEA + EM G
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 181 LTP 183
L P
Sbjct: 518 LPP 520
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L+QGL L A + +M+++G PD T+ SLI C GE
Sbjct: 478 MVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGE 537
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL---------------HN 105
+ + ++ + + G D TY +LI ++K A RLL +
Sbjct: 538 LSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNT 597
Query: 106 LVED-GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
L+E+ +N F S+ ++KG +G ++A F + + H PN +Y +I RGG
Sbjct: 598 LIENCSNNEFKSVEG-LVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGG 656
Query: 165 RFVEAANYLMEM 176
+A N ME+
Sbjct: 657 NVHKAYNLYMEL 668
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+P V + LV G G ++ A ++ M+++G PD+ +++++I C+ E+
Sbjct: 412 GFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKA 471
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+M + + G D TY LI + + EAF L ++ G P Y +I
Sbjct: 472 FQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINA 531
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
G+ A E+ +G P+ Y+ LI + R A L+++
Sbjct: 532 YCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V ++ G L A QM +M+++G PD T++SLI+ +C +
Sbjct: 443 MVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQK 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G D TY LI A G + +A RL +V+ G P Y+
Sbjct: 503 LVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSV 562
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+I G ++ + A ++ + P+ Y TLI C
Sbjct: 563 LINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENC 602
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 87/188 (46%), Gaps = 7/188 (3%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG-----EVEFCVEMY 68
DL+V+ L G++ A +++ + G P + ++N++++ + + + + ++
Sbjct: 136 DLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVF 195
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ + G +V TY ++I V G +++ + + ++G +P Y +I + ++
Sbjct: 196 RDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKK 255
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ +A + + G N Y ++I +CG+ GR E + EM GL P
Sbjct: 256 KKVKEAMALLRAMAVGGVAANLISYNSVINGLCGK-GRMSEVGELVEEMRGKGLVPDEVT 314
Query: 188 FDLVTDGL 195
++ + +G
Sbjct: 315 YNTLVNGF 322
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV-----SKAGMIDEAFR 101
F+ +++++ + G V + + + + G V +Y ++ A+ S D+A R
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+ ++V +G +P Y II+G +G + F +++ +G PN Y TLI
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ + EA L M G+ ++ V +GL CGK ++E E +E
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGL--CGKGRMSEVGELVE 301
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 9/215 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P ++ + NAG L+ A + M G DP++ T+ +LI ++ +
Sbjct: 138 MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKK 194
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + + G ++ TY +L+ A+ K M+ A ++ ++E G P +
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +RG DDA + KG PN Y+ LI + +F+EA L EM G
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+TP + + + GL A+KIE+ E LR
Sbjct: 315 VTPDAFTYSALIHGLCK------ADKIEEAEQMLR 343
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + ++LV L + +A+ +V KMI+ G P++ TFNSL++ CK G
Sbjct: 205 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 264
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G +V TY LI + K+ EA +L + G P Y+
Sbjct: 265 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSA 324
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A + G P+ VY+++I + G+ +EA L EM +
Sbjct: 325 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 384
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
+P ++ V DGL GK A+ I EQ++ S
Sbjct: 385 KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQES 418
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P V + LV G G ++ A++++ M+ +G P++ T+++LI+ +CKS +
Sbjct: 240 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + G D TY LI + KA I+EA ++L + G P +Y+
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ +A E++ + P+ Y T+I + G+ EA L +M E G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 181 -LTPISRCFDLVTDGL 195
+ P + V +GL
Sbjct: 420 DVLPDVVTYSTVINGL 435
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD-PDLETFNSLIETICKSG 59
M + +P V + ++ GL G + A+ ++ +M + G PD+ T++++I +CKS
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ ++ +CK G DV TY +I + K G ++EA LL + G P Y
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE- 178
+I G + + D+A E++ G PPN Y T++ GR EA + M +
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 559
Query: 179 -MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+P + + + + L + DL ++ EQL ++S
Sbjct: 560 RAECSPDAATYRTIVNALMS---SDLVQEAEQLLEQMKST 596
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V L+ A LE A +++ +M ++G P+L T+N L++ +CK V
Sbjct: 174 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 233
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G +V T+ L+ K G +D+A +LL +V G P Y+ +I G
Sbjct: 234 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 293
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +F +A E+K +G P+ Y+ LI + + EA L M G TP
Sbjct: 294 LCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + GK A+K Q
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQ 378
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+ + L+Q L+ A + + +PD+ ++N +I C +G++
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + G D T+ +I A++ AG +D A L ++ G +P Y +I
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 188
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R + ++A E++ +G PPN Y L+ + A + + +M E G P
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
F+ + DG G D A K+
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKL 271
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 9/215 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P ++ + NAG L+ A + M G DP++ T+ +LI ++ +
Sbjct: 16 MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKK 72
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + + G ++ TY +L+ A+ K M+ A ++ ++E G P +
Sbjct: 73 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 132
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +RG DDA + KG PN Y+ LI + +F+EA L EM G
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+TP + + + GL A+KIE+ E LR
Sbjct: 193 VTPDAFTYSALIHGLCK------ADKIEEAEQMLR 221
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + ++LV L + +A+ +V KMI+ G P++ TFNSL++ CK G
Sbjct: 83 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 142
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G +V TY LI + K+ EA +L + G P Y+
Sbjct: 143 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSA 202
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A + G P+ VY+++I + G+ +EA L EM +
Sbjct: 203 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 262
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
+P ++ V DGL GK A+ I +Q++ S
Sbjct: 263 KSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 6/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD-PDLETFNSLIETICKSG 59
M + +P V + ++ GL G + A+ ++++M + G PD+ T++++I +CKS
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ ++ +CK G DV TY +I + K G ++EA LL + G P Y
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE- 178
+I G + + D+A E++ G PPN Y T++ GR EA + M +
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 437
Query: 179 -MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+P + + + + L + DL ++ EQL
Sbjct: 438 RAECSPDAATYRTIVNALMS---SDLVQEAEQL 467
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P V + LV G G ++ A++++ M+ +G P++ T+++LI+ +CKS +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + G D TY LI + KA I+EA ++L + G P +Y+
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ +A E++ + P+ Y T+I + G+ EA L +M E G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 181 -LTPISRCFDLVTDGL 195
+ P + V +GL
Sbjct: 298 DVLPDVVTYSTVINGL 313
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V L+ A LE A +++ +M ++G P+L T+N L++ +CK V
Sbjct: 52 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 111
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G +V T+ L+ K G +D+A +LL +V G P Y+ +I G
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 171
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +F +A E+K G P+ Y+ LI + + EA L M G TP
Sbjct: 172 LCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + GK A+K Q
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQ 256
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
AG + A LL + G P + PII G D A ++ G PN
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVT 59
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
YT LI R + EA L EM E G P ++++ D L
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 102
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P L+ GLL G +E A+ + ++M+ G P+ +N L+ +G E
Sbjct: 875 EGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEK 934
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E++ ++ G D+ +Y +LI A+ AG ++++ L E G P Y +I
Sbjct: 935 VCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIH 994
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ ++A F++++ G PN Y +LI G+ G+ EA E+ + G P
Sbjct: 995 GLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKP 1054
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++ + G G D A
Sbjct: 1055 NVFTYNALIGGYSVSGSTDNA 1075
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G NP ++ +L+ L AG L + ++ + G +PDL T+N LI + +SG
Sbjct: 942 MVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGR 1001
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V ++ + K G ++ TY LI + K G EA ++ L+++G P Y
Sbjct: 1002 LEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNA 1061
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I G G D+AF + ++ + G PPN Y L
Sbjct: 1062 LIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 35/220 (15%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL++ ++ A+ + ++M + G DPD T+N +++ + KS +E +++ + G
Sbjct: 782 LICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKG 841
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ M+ EA L + L+ +G +P P Y P++ G + G+ +DA
Sbjct: 842 YESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAE 901
Query: 136 CFFSEIKIKGHPPNRPVY-----------------------------------TTLITMC 160
F E+ G PNR +Y T LI
Sbjct: 902 DLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGAL 961
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
GR ++ +Y ++TE+GL P ++L+ GL G+
Sbjct: 962 CTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGR 1001
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V +L+Q L +AG + AK + KM PD T+ +L++ +G+
Sbjct: 277 MEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGD 336
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ ++ G +V Y ++ A+ + G +DEA + + + G P Y
Sbjct: 337 SRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNS 396
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + + A F+ + I G PN Y I G+ G ++A M G
Sbjct: 397 LISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKG 456
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V L G+ +A+++
Sbjct: 457 IVPDVVAGNAVLYSLAKSGRLGMAKRV 483
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ + ++ GL+ + L A + K++ +G P T+ L++ + K G+
Sbjct: 837 MHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGK 896
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G + + Y IL+ AG ++ L N+V+ G NP Y
Sbjct: 897 IEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTV 956
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +D+ +F ++ G P+ Y LI GR GR EA + +M + G
Sbjct: 957 LIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG 1016
Query: 181 LTP 183
+ P
Sbjct: 1017 IAP 1019
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ L +G L AK++ +++ G PD T+ +I+ K+
Sbjct: 452 MKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASN 511
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + + DV LI + KAG +EA+++ H L E +P Y
Sbjct: 512 ADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNT 571
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + E+ +PPN Y T++ + G A L MT G
Sbjct: 572 LLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKG 631
Query: 181 LTPISRCFDLVTDGL 195
P ++ GL
Sbjct: 632 CMPDLSSYNTALHGL 646
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETF------------ 48
M KG P + L+ G L A L A ++ N M G P+ T+
Sbjct: 382 MKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGE 441
Query: 49 -----------------------NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
N+++ ++ KSG + +++ + +G C D TY +
Sbjct: 442 SLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTM 501
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I SKA DEA ++ ++E P +I ++ G+ ++A+ F E+K
Sbjct: 502 MIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMN 561
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P Y TL+ GR G+ E + L EM P ++ V D L G+ + A
Sbjct: 562 LDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYA 620
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+N V +V L G ++ A + ++M ++G +P ++NSLI K+
Sbjct: 347 MKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADR 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + G + TY + I K+G +A + + G P
Sbjct: 407 LNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNA 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ A F E+K G P+ YT +I C + EA EM E
Sbjct: 467 VLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETR 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + D L G+ + A KI
Sbjct: 527 CVPDVLAVNSLIDTLYKAGRGNEAWKI 553
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 1/192 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ +GY A ++ M G P + T++ L+ K +VE V + + G
Sbjct: 188 LIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHG 246
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y I I + +AG +EA+++L + ++G P +I+ G+ DA
Sbjct: 247 VKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAK 306
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P+R Y TL+ CG G M G + V D L
Sbjct: 307 DVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDAL 366
Query: 196 KNCGKHDLAEKI 207
G+ D A +
Sbjct: 367 CQVGRVDEASDV 378
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL G ++ ++ +M P+L T+N++++ +CK+GEV + + M Y++
Sbjct: 570 NTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTM 629
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+S+Y + + K + EAFR+ + + + +L I+ + G ++
Sbjct: 630 KGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTL-CTILPSFVKNGLMNE 688
Query: 134 AFCFFSEIKIK-GHPPNRPVYTTLIT-MCGRGG--RFVEAANYL----MEMTEMGLTPIS 185
A E ++ G +R + +L+ + R G + +E A + + + + L+P+
Sbjct: 689 ALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLI 748
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
R L+ H+L +K E L VSL++
Sbjct: 749 RHLCKSKKALE---AHELVKKFESLGVSLKT 776
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
A + A ++ ++MI+ PD+ NSLI+T+ K+G ++++ + ++ T
Sbjct: 509 ASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCT 568
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y L+ + + G + E LL + + + P Y ++ + G+ + A +
Sbjct: 569 YNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMT 628
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP--ISRCFDL---VTDGLKN 197
+KG P+ Y T + + R EA +M ++ L P + C L V +GL N
Sbjct: 629 MKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMN 687
Query: 198 CGKHDLAEKIEQ 209
H L E I Q
Sbjct: 688 EALHTLKEYILQ 699
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 3/208 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ L AG A ++ +++ + DP T+N+L+ + + G+V+ + +
Sbjct: 529 PDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHL 588
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ TY ++ + K G ++ A +L+N+ G P S Y + G +
Sbjct: 589 LEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVK 648
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEMGLTPISR 186
+ +AF F ++K K P+ T++ + G EA + L E + + G
Sbjct: 649 EDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRS 707
Query: 187 CFDLVTDG-LKNCGKHDLAEKIEQLEVS 213
F + +G LK G E E + +S
Sbjct: 708 SFHSLMEGILKRAGMEKSIEFAENIALS 735
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V +L+ GL A + A+Q++ KM+ G P++ T++++I +CK G+
Sbjct: 210 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQ 269
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E++ + + +V T+ ILI + KA I+EA +L H + E G P Y
Sbjct: 270 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 329
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + Q D+AF F I G N Y+TL GR +A + +
Sbjct: 330 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 389
Query: 180 GLTP 183
G +P
Sbjct: 390 GFSP 393
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 14 DLLVQGLLNA-GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+ ++Q L N +E A +++ +I +G P + FN +I CK+ +++ ++ +
Sbjct: 152 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 211
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G +V T+ ILI + KA + EA +LL +V G +P Y+ +I G ++GQ D
Sbjct: 212 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVD 271
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA+ F ++ + PPN + LI + R EA M E G P ++ +
Sbjct: 272 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 331
Query: 193 DGL 195
DGL
Sbjct: 332 DGL 334
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV L AG + A+ M+ +MI +G PD TF++LI+ +CK G E +
Sbjct: 76 PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRV 135
Query: 68 YYSVCKLGSCADVSTYKILIPAV-SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
V + G + ++ +I + +K ++ A ++L ++ G P ++ +I G
Sbjct: 136 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 195
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ D A+ + KG PN +T LIT + R EA L +M G +P
Sbjct: 196 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVV 255
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQL 210
+ V +GL G+ D A ++ QL
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQL 279
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++G +AG L+ A Q++ +M G + + +L++ +C +G V +E + ++ K
Sbjct: 14 ILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK- 72
Query: 75 GSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
CA DV TY L+ A+ KAG DEA +L ++ G P ++ +I G + G +
Sbjct: 73 -DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQ 131
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
AF ++ +G + + T+I +C + A+ L + G TP F+LV
Sbjct: 132 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 191
Query: 193 DGLKNCGKHDLAEKIEQLEV 212
+G C DL + LEV
Sbjct: 192 NGF--CKAKDLDSAYKLLEV 209
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++GF V + L+ GL + A Q+ M+ G P++ T N +I +C + +
Sbjct: 529 MSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAK 588
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V+ E+ + KLG C D+ T LI K+G D A +LL + E G P
Sbjct: 589 VDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 641
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS---DPDLETFNSLIETICK 57
M+ +G +L+V+G+ A A ++ ++I + +P ++L+E++C+
Sbjct: 456 MAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 515
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G + ++ + + + G A VS+Y L+ +S+ DEA ++ +V G P S
Sbjct: 516 VGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 575
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+I + DDA+ + G P+ TLI + GR A L EMT
Sbjct: 576 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 635
Query: 178 EMGLTPISRCFDLV 191
E GL P DL+
Sbjct: 636 EAGLEPNDTTHDLL 649
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 7/212 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KGF P V ++ GL + E A Q+ + M +G D +N ++E + ++ +
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480
Query: 61 VEFCVEMYYSVC-----KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+ + V K + S L+ ++ + G D+A +LLH + E G
Sbjct: 481 HNKALAVLEQVIDKRDRKFNPSS--SAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAV 538
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
S Y ++ G R ++D+A F + G P +I+ + +A +
Sbjct: 539 SSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQR 598
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M+++G P + + G G+ DLA K+
Sbjct: 599 MSKLGCCPDIETCNTLIGGYCKSGRADLARKL 630
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY ILI S AG +D A +LL + +G ++ ++KG G+ +A F +
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K P+ YT L+ + G+F EA L EM G P + F + DGL G
Sbjct: 71 A-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129
Query: 202 DLAEKI 207
+ A ++
Sbjct: 130 EQAFRV 135
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ DKGF+P + L+ ++V +M +G P + T ++++ + +
Sbjct: 386 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 445
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED---GHNPFPSL 117
E ++++ S+ G D Y +++ +++A ++A +L +++ NP S
Sbjct: 446 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSA 505
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+++ + G+ DDA ++ +G Y L++ R R+ EA M
Sbjct: 506 VDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMV 565
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G P ++V L + K D A ++ Q
Sbjct: 566 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQ 597
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 3/201 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L G G + A ++ + ++ +G PDL T+ SLI CK+ VE+ + G
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 425
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V+T ++ + + + A +L ++ G +Y +++G R + + A
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKAL 485
Query: 136 CFFSEI---KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
++ + + P+ L+ + GR +A L +M+E G ++ +
Sbjct: 486 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLL 545
Query: 193 DGLKNCGKHDLAEKIEQLEVS 213
GL + D A ++ + VS
Sbjct: 546 SGLSRLQRWDEATQVFEAMVS 566
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + L+ G G +E+A+++++ M +P+ T+N LI C+
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + + V TY LI K G +D A+RLL+ + E+G P Y+
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I ++G+ ++A F+ +K KG N +YT LI + G+ +A + L M
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P S ++ + DGL C + + E + +E
Sbjct: 315 CLPNSSTYNALIDGL--CKERKVQEALLLME 343
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V + L+ G GYL+SA +++N M + G PD T++ I+T+CK G
Sbjct: 205 MLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGR 264
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ S+ + G A+ Y LI KAG +D+A LL ++ + P S Y
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A + KG P YT LI + G F A L +M G
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG 384
Query: 181 LTP 183
P
Sbjct: 385 YQP 387
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG ++ A ++++M+ + P+ T+N+LI+ +CK +V+ + + S+ + G
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY ILI A+ K G D A R+L +V G+ P +Y I RG +A
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + +G P+ YT +I G G A + L M + G P + + +
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCL---I 466
Query: 196 KNCGKHDLAEKIEQL 210
K+ K +L +K + +
Sbjct: 467 KHLLKEELTKKYKNV 481
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 4/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M NP R + L+ G + A +++KM++ P + T+NSLI CK G
Sbjct: 170 MHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGY 229
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D TY + I + K G I+EA L ++L E G +Y
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME-MTE 178
+I G + G+ DDA + + PN Y LI +C R V+ A LME M +
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKE--RKVQEALLLMESMIQ 347
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
GL + ++ + G D A +I VS
Sbjct: 348 KGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVS 382
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P VR ++V L +G A + ++M ++G +P++ T+ +I +CK ++E +
Sbjct: 72 PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRI 131
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G V TY LI K GM++ A +L + + NP Y +I G R
Sbjct: 132 LDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCR 191
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A S++ P+ Y +LI + G A L M E G+ P
Sbjct: 192 KKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWT 251
Query: 188 FDLVTDGLKNCGK 200
+ + D L G+
Sbjct: 252 YSVFIDTLCKKGR 264
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 33/227 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V +L+ +L G + A +++++M+ G PD+ + + I C G
Sbjct: 345 MIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGN 404
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M + + G D TY ++I A G+++ AF +L + + G +P Y+
Sbjct: 405 IKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSC 464
Query: 121 IIK-----------------------------GAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+IK ++ +F+ A F ++ G PN
Sbjct: 465 LIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNIN 524
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
Y LI + GR A M E G++P + + + L NC
Sbjct: 525 TYAKLIIGLCKVGRLGVAQKLFDHMNERGVSP----SEAIYNSLLNC 567
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G ++ + KM + P + T+ ++ + +SG + ++ + + G
Sbjct: 45 LIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERG 104
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY ++I A+ K ++E R+L +VE G P Y +I G + G + A
Sbjct: 105 CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQ 164
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ PN Y LI R A L +M E LTP ++ + G
Sbjct: 165 EILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQ 224
Query: 196 KNCGKHDLAEKIEQL 210
G D A ++ L
Sbjct: 225 CKIGYLDSAYRLLNL 239
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+Y LI + + G +DE + + ED P Y I+ F G+ +A FSE+
Sbjct: 41 SYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM 100
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ +G PN YT +I + + E L EM E GL P ++ + DG G
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMV 160
Query: 202 DLAEKIEQL 210
+ A++I L
Sbjct: 161 EAAQEILDL 169
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV+ LN + SA + N M K+G + ++ +LI +C+ G V+ + ++ + +
Sbjct: 11 LVEANLNND-VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDD 69
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY +++ A+ ++G EA L + E G P Y +I + + ++
Sbjct: 70 CYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGR 129
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME-MTEMGLTPISRCFDLVTD 193
E+ KG P+ P Y LI C G VEAA +++ M P R ++ +
Sbjct: 130 RILDEMVEKGLVPSVPTYNALIDGYCKEG--MVEAAQEILDLMHSNSCNPNERTYNELIC 187
Query: 194 GLKNCGKHDLAEKIEQLEVSLRS 216
G C K ++ + L L S
Sbjct: 188 GF--CRKKNVHRAMALLSKMLES 208
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
E+A ++ KM++ G P++ T+ LI +CK G + +++ + + G + Y
Sbjct: 504 FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNS 563
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G+ +A RL+ ++E GH P + G + G + A FS + G
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG 623
Query: 146 HPPNRPVYTTLI 157
+ + + LI
Sbjct: 624 YNDDEVAWKILI 635
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + L+ GL G L A+++ + M ++G P +NSL+ C+ G
Sbjct: 514 MLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGI 573
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + G + + +L + + G ++A + NL++ G+N +
Sbjct: 574 YGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKI 633
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G + G D ++ +G + Y LI
Sbjct: 634 LIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 83/231 (35%), Gaps = 29/231 (12%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIE------- 53
M ++G P L++ G L A ++ +M G DP T++ LI+
Sbjct: 415 MFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEEL 474
Query: 54 ----------------------TICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ K + E +E++ + + G +++TY LI +
Sbjct: 475 TKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLC 534
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K G + A +L ++ E G +P ++Y ++ G + DA + GH P
Sbjct: 535 KVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLE 594
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
L G +A + + G + ++ DGL G D
Sbjct: 595 SLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSD 645
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G +P + L+ G A ++V M++ G P LE+ N L + + G
Sbjct: 549 MNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGS 608
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ ++ + G D +KILI + K G+ D LL + G P Y
Sbjct: 609 KEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRM 668
Query: 121 IIKG 124
+I+G
Sbjct: 669 LIEG 672
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V L+ L N+G +E A + +M+K+G P++ T +SL++ G
Sbjct: 272 MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGT 331
Query: 61 VEFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++++ + + G +V Y L+ G I +A + ++ E G +P Y
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G +RG D A ++++ G PN VYT ++ R +F EA + + M++
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVSLR 215
P F+ GL + G+ D AEK+ Q+E R
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 6/208 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P ++ + G ++ +++ + +P + +N+LI +CK +
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHD 261
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + + G +V +Y LI + +G I+ AF L +++ G +P +
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++KG F RG DA +++ I+ G PN Y TL+ G V+A + M E+
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P R + + +G G D A I
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 5/179 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V+ + ++ LL ++ + M + G +P++ T+N L++ +CK+ +V+
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G C D +Y +I ++ + G++ E L + P S+Y +I G
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALING 255
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + AF E+ KG PN Y+TLI + G+ A ++L +M + G P
Sbjct: 256 LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + LVQG + G + A + + M + G P++ T+ SLI K G ++
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V ++ + G C +V Y ++ A+ + EA L+ + ++ P + IKG
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 125 AFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ D A F +++ + PPN Y L+ + R EA E+ G+
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 184 ISRCFDLVTDGLKNCG 199
S ++ + G N G
Sbjct: 527 SSSTYNTLLHGSCNAG 542
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P +R L+ G G L+ A + NKM+ G P++ + +++E +C+ +
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ + + K V T+ I + AG +D A ++ + E H P++ Y
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM-EQQHRCPPNIVTY 496
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
++ G + + ++A+ EI ++G + Y TL+
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +V+ L + A+ ++ M K+ P + TFN+ I+ +C +G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ +++ + + C ++ TY L+ ++KA I+EA+ L + G S Y
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
++ G+ G A ++ + G P+ +I + G+ AA L
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G NAG A Q+V KM+ G PD T N +I CK G+ E +M
Sbjct: 532 NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML----D 587
Query: 74 LGSCA------DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
L SC DV +Y +I + ++ ++ LL ++ G P + ++ +I
Sbjct: 588 LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 4/166 (2%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TF +I + G+V+ + + G + +I + G+ + A + + +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
E G +P +Y ++ + + + ++K G PN Y L+ + +
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG----KHDLAEKIE 208
A L+EM+ G P + + V + G +LAE+ E
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE 243
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P LV G ++G L A + + KM G +P++ T++S ++ +CK+G
Sbjct: 259 MVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGR 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++YS+ K G D++TY L+ + G + E L +V+ P ++
Sbjct: 319 CTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNT 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + ++G+ D+A FS+++ +G PN Y TLI + R A EM G
Sbjct: 379 LIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
++P ++++ GL G+ A++
Sbjct: 439 VSPNFITYNIMLQGLFRTGRTGTAKE 464
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V +L+ +AG L+ + ++K+G + FN L++ +C + ++
Sbjct: 87 TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146
Query: 67 MYY-SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIK 123
+ + +LG +V ++ I++ + EA LLH + +DG P++ Y+ +
Sbjct: 147 IVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTD 206
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G D A+ + E+ + PN Y+++I +G +A M + G+TP
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP 266
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
CF + C L E I+ LE
Sbjct: 267 --NCFTYTSLVHGFCSSGQLTEAIKFLE 292
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 2/206 (0%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G P V + GLL G + A +M+ + P++ T++S+I +CK
Sbjct: 187 MADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKG 246
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
++ +E++ + K G + TY L+ +G + EA + L + +G P Y
Sbjct: 247 QAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTY 306
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + + G+ +A F + +G P+ Y++L+ G VE M +
Sbjct: 307 SSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQ 366
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLA 204
+ P F+ + GK D A
Sbjct: 367 SDMQPDHYVFNTLIYASAKQGKVDEA 392
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G G L + + M++ PD FN+LI K G+
Sbjct: 329 MVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGK 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G + TY LI K ++ A L +V +G +P Y
Sbjct: 389 VDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNI 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+++G FR G+ A F+ +I G
Sbjct: 449 MLQGLFRTGRTGTAKEFYVQIIKSG 473
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 15/194 (7%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA-- 78
+ +G E A + ++++++G + + N + + + V + + + G+
Sbjct: 29 VGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAA-AVSRFNRMARAGASMVT 87
Query: 79 -DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
V TY ILI AG +D F L ++V+ G P ++ P++KG + DDA
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM-- 145
Query: 138 FSEIKIKGHP-----PNRPVYTTLITMCGRGGRFVEAANYLMEMTE--MGLTPISRCFDL 190
+I ++G PN +T ++ R EA L M + G P +
Sbjct: 146 --DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYST 203
Query: 191 VTDGLKNCGKHDLA 204
VTDGL G D A
Sbjct: 204 VTDGLLKGGDPDKA 217
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG+ P V ++L+ L G +E A ++++++ K G P+ ++N ++ CK +
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ +Y L+ A+ + G +D A LLH L + G P Y
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A +E+ KG P+ Y+T+ + R R EA ++ +MG
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + ++ + GL C + + I+
Sbjct: 467 IRPNTVLYNAILLGL--CKRRETHNAID 492
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 97/200 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +++V G+ G ++ A + + + G +P+ ++N +++ +C +
Sbjct: 217 MRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + + G +V T+ +LI + + G+++ A +L + + G P Y P
Sbjct: 277 WEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNP 336
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + D A F + +G P+ Y TL+T RGG A L ++ + G
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP+ ++ V DGL GK
Sbjct: 397 CTPVLISYNTVIDGLTKAGK 416
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D P + L++GL G +A +++ M+++G PD+ T+ L+E CK
Sbjct: 147 VADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSG 206
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY +++ + + G +D+A L +L G P Y
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG +++DA +E+ KG+PPN + LI+ R G A L ++ + G
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
TP S ++ + K D A +L VS
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 359
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ G P +++++GL A E A++++ +M ++G P++ TFN LI +C+ G
Sbjct: 252 LPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGL 311
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + K G + +Y ++ A K +D A + +V G P Y
Sbjct: 312 VEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNT 371
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G+ D A ++K KG P Y T+I + G+ EA L EM G
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + ++ GL C + + E I
Sbjct: 432 LQPDIITYSTISSGL--CREDRIEEAIR 457
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A V M+ +G PD+ ++N+L+ +C+ GEV+ VE+ + + G + +Y
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I ++KAG EA LL+ +V G P Y+ I G R + ++A F +++ G
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466
Query: 146 HPPNRPVYTT-LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
PN +Y L+ +C R A + + M G P + ++ +GL
Sbjct: 467 IRPNTVLYNAILLGLCKRRETH-NAIDLFIYMISNGCMPNESTYTILIEGL 516
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G +++A ++++++ +G P L ++N++I+ + K+G+
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G D+ TY + + + I+EA R + + G P LY
Sbjct: 417 TKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNA 476
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G +R + +A F + G PN YT LI G EA L E+ G
Sbjct: 477 ILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536
Query: 181 L 181
+
Sbjct: 537 V 537
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K P +R LV GL G ++ A+ ++ MIKQ +P++ T+NSL++ E
Sbjct: 114 MTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKE 173
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ ++ G +V +YK++I + K M+DEA L + P Y
Sbjct: 174 VNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNS 233
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D + F E+ +G P N Y +L+ + + +A L ++ G
Sbjct: 234 LIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQG 293
Query: 181 LTPISRCFDLVTDGLKNCGK--------HDLAEKIEQLEVSLRSV 217
+ P + ++ DGL G+ DL K QL+ + +V
Sbjct: 294 IRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTV 338
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G P VR +++ GL ++ A + +M + PD +NSLI+ +CKS
Sbjct: 184 ISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRR 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G A++ TY L+ + K +D+A LL + G P Y
Sbjct: 244 IYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTI 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA + ++ KG+ + +YT +I + G EA + L +M +
Sbjct: 304 LVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNK 363
Query: 181 LTPISRCFDLVTDGL 195
TP +++ L
Sbjct: 364 CTPDGVTYEITIRAL 378
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + + L+ GL ++ A ++ K+ QG P++ T+ L++ +CK+G
Sbjct: 254 MHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGR 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y + G D Y ++I + K G +DEA LL + ++ P Y
Sbjct: 314 LRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEI 373
Query: 121 IIKGAFRRGQFDDAFCFF 138
I+ F + + + F
Sbjct: 374 TIRALFESDRNEILYIFI 391
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICK--------------SGEVEFCVEMYYSVCKLGSC 77
+ ++MI + PD+ T+N+LI ++ G+++ V + +
Sbjct: 61 LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
++ T+ L+ + K G + +A +L +++ P Y ++ G F + + A
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ I ++G PN Y +I + EAAN EM + P + ++ + DGL
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGL 238
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +V G ++G + A + KM G +PD+ T+NSL++ +CK+G
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY L+ + G + E LL +V +G +P +++
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + ++A FS+++ +G PN Y T+I + + GR +A Y +M + G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P S ++ + L K + AE++
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEEL 348
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 9/194 (4%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G + P V ++ G G L+ KM+ Q P++ T+NS+I +CK+
Sbjct: 77 MADDGGDCPPDVVSYSTVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKA 129
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
V+ +E+ ++ K G D TY ++ +G EA L + DG P Y
Sbjct: 130 QTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 189
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ +A F + +G P+ Y TL+ G VE L M
Sbjct: 190 NSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR 249
Query: 179 MGLTPISRCFDLVT 192
G+ P F ++
Sbjct: 250 NGIHPNHYVFSILV 263
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 21/228 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP ++ L +G +E A +MI +G PD +NSLI ++C +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E++ + G C + +I + K G + E+ +L +V G P
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGR 401
Query: 121 IIKGAFRR-GQFDDAFCFFSEIKIKGHPPNR-PVYTT--LITMCGRGGRFVEAANYLM-- 174
+ A R F + + F+ + G PV T GG F+ N ++
Sbjct: 402 FLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHG 461
Query: 175 ----EMTE-----------MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++T+ M L +R F+++ D L G++D A+ +
Sbjct: 462 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 509
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 24/235 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ L E A+++ +M+ +G FNS+I++ CK G
Sbjct: 317 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTY-KILIPAVSKAGMIDEAFRLLHNLVEDGHN------- 112
V +++ + ++G D+ T + L A + + + N+ G
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVN 436
Query: 113 -------------PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
PF Y I+ G + DDA F + + + +I
Sbjct: 437 TNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 496
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ GR EA + + + GL P + L+ + + G L E+++QL +S+
Sbjct: 497 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG---LLEELDQLFLSM 548
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFC 136
DV +Y IL+ + EA LLH + +DG + P + Y+ +I G F+ G D
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML- 108
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ +I PN Y ++I + +A L M + G+ P ++ + G
Sbjct: 109 ---DQRI---SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162
Query: 197 NCGK 200
+ G+
Sbjct: 163 SSGQ 166
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S+ P + ++++ GL + A +M + + TFN +I+ + K G
Sbjct: 444 SNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 503
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +++ + G + TY+++ + G+++E +L ++ ++G + I
Sbjct: 504 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 563
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
++ +RG+ A + S I K + I + GG++ E +L E
Sbjct: 564 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYHIFLPE 616
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P L T+N ++ +CK+ + + M+ ++C + + T+ I+I A+ K G DEA L
Sbjct: 450 PFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 509
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+G P Y + + +G ++ F ++ G + + ++ +
Sbjct: 510 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 569
Query: 163 GGRFVEAANYLMEMTE 178
G A YL + E
Sbjct: 570 RGEITRAGTYLSMIDE 585
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 6/215 (2%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+D+ P V ++ GL AG L+ A+++ ++M +G P T+N+LI+ CK G +
Sbjct: 276 NDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNL 335
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E V ++ + + G +V TY +LI + AG + A +LL + +G P Y +
Sbjct: 336 EDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVL 395
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHP--PNRPVYTTLIT---MCGRGGRFVEAANYLMEM 176
I+ + G+ + F E KG PN+ Y +I+ + R AA ++EM
Sbjct: 396 IRYSLEEGEIEKGLDLF-ETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEM 454
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ G P F+ V +GL G +L+ ++ +++
Sbjct: 455 VDRGYLPRKFMFNRVLNGLMLTGNQELSRELLRMQ 489
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++ F P + L G A ++ +M++ G P T+N +++ +SG+++
Sbjct: 202 EQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQ 261
Query: 63 FCVEMYYSVCKLGS----CA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ + + + GS C DV +Y ++ + AG +D+A ++ + +G P +
Sbjct: 262 HAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTAT 321
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I+ ++G +DA F ++ KG+ PN YT LI G+ V A L M
Sbjct: 322 YNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMK 381
Query: 178 EMGLTPISRCFDLV 191
G P + ++++
Sbjct: 382 SEGCEPNVQTYNVL 395
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 6/197 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ + A +V + ++Q PD T+N+L + C+ + +++ + + G
Sbjct: 181 LLDALVKSRRASKAASLV-RALEQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESG 239
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN-----PFPSLYAPIIKGAFRRGQ 130
+TY I++ ++G + A+ + G N P Y ++ G GQ
Sbjct: 240 IAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQ 299
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
D A F E+ I+G P+ Y LI + + G +A +M G P + +
Sbjct: 300 LDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTV 359
Query: 191 VTDGLKNCGKHDLAEKI 207
+ GL + GK A K+
Sbjct: 360 LIRGLCHAGKVVRAMKL 376
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G DL FNSL++ + KS + ++ + D TY L +
Sbjct: 169 HGIAQDLPLFNSLLDALVKSRRASKAASLVRALEQRFP-PDAVTYNTLADGWCRVKDTSR 227
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-----PPNRPVY 153
A +L +VE G P + Y I+KG FR GQ A+ FF ++K +G P+ Y
Sbjct: 228 ALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSY 287
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
TT++ G G+ +A EM+ G P + ++ + C K +L + +
Sbjct: 288 TTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQ--VTCKKGNLEDAV 339
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ P V +L++GL +AG + A +++++M +G +P+++T+N LI + GE
Sbjct: 345 MVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGE 404
Query: 61 VEFCVEMYYSVCKLGSC-ADVSTYKILIPAV---SKAGMIDEAFRLLHNLVEDGHNPFPS 116
+E ++++ ++ K C + TY I+I A+ +A + A R++ +V+ G+ P
Sbjct: 405 IEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKF 464
Query: 117 LYAPIIKG 124
++ ++ G
Sbjct: 465 MFNRVLNG 472
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ GL+N+ ++ESA+++ M PD+ ++N++I+ CK+G
Sbjct: 216 MKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGN 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + + K D TY LI A G D L + E G P Y+
Sbjct: 276 TKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSL 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + F + KG N +YT LI G+ G EA N M G
Sbjct: 336 VIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEG 395
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P + ++ +GL G+ D E +E E
Sbjct: 396 FEPDDVTYGVIVNGLCKSGRLD--EAVEYFE 424
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+Q + G +S + +M ++G + ++ +I +CK G ++ ++ K G
Sbjct: 301 LIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKG 360
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+V+ Y LI A K G ++EA L + +G P Y I+ G + G+ D+A
Sbjct: 361 CKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAV 420
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+F K N Y++LI G+ GR EA + EM E G S C++ + D L
Sbjct: 421 EYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDAL 480
Query: 196 KNCGKHDLA 204
GK + A
Sbjct: 481 AKSGKMEEA 489
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG V L+ G + A + +M +G +PD T+ ++ +CKSG
Sbjct: 356 MNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGR 415
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ VE Y+ CK A + Y LI + KAG +DEA + +VE G Y
Sbjct: 416 LDEAVE-YFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYN 474
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G+ ++A F ++ +G YT LI+ + R EA M +
Sbjct: 475 ALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDK 534
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+TP + F ++ GL GK A KI
Sbjct: 535 GITPTTASFRALSVGLCLSGKVARACKI 562
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L++ GL G + M K+G ++ + +LI+ K+G
Sbjct: 321 MEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGN 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + G D TY +++ + K+G +DEA ++ Y+
Sbjct: 381 VNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSS 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A FF E+ +G P + Y LI + G+ EA M + G
Sbjct: 441 LIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEG 500
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ ++ GL +++ A K+ L +
Sbjct: 501 CDQTVYTYTILISGLFKEHRNEEALKLWDLMI 532
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG ++ A++ +M+++G D +N+LI+ + KSG++E + ++ + K G
Sbjct: 441 LIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEG 500
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY ILI + K +EA +L +++ G P + + + G G+ A
Sbjct: 501 CDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARAC 560
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ G P + +I + + GR +A + + G R ++ + L
Sbjct: 561 KILDELAPMGVIP-ETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINAL 619
Query: 196 KNCGKHDLAEKIEQLEVSL 214
+ G DLA K+ ++ +
Sbjct: 620 RKAGNADLAMKLMHSKIGI 638
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P ++V GL +G L+ A + + ++SLI+ + K+G
Sbjct: 391 MKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGR 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + + G D Y LI A++K+G ++EA L + ++G + Y
Sbjct: 451 VDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTI 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ + ++A + + KG P + L G+ A L E+ MG
Sbjct: 511 LISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMG 570
Query: 181 LTPISRCFDLVT 192
+ P + D++
Sbjct: 571 VIPETAFEDMIN 582
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
NSLI + G VE + ++ + + G + T+ L+ + + I+ A R+ +
Sbjct: 194 NSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMEC 253
Query: 109 DGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
P Y +IKG + G A F++++ + P++ Y TLI C G F
Sbjct: 254 GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDS 313
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ EM E GL + LV GL G+
Sbjct: 314 CLHLYQEMEERGLEIPPHAYSLVIGGLCKDGR 345
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L GL +G + A ++++++ G P+ F +I +CK+G
Sbjct: 531 MIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPE-TAFEDMINVLCKAGR 589
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
E ++ + G ILI A+ KAG D A +L+H+ + G++ S+
Sbjct: 590 TEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYDRMGSI 646
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGY-LESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M G P + + ++ G A ++ ++M++ G PD TFNSL+ + G
Sbjct: 246 MKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGG 305
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
E ++ + G D+ TY L+ AV K G +D AF+++ + P Y+
Sbjct: 306 LWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYS 365
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ D+A F+E+K +R Y TL+++ + GRF EA N EM
Sbjct: 366 TVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESS 425
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ + ++ + G GK++ +++
Sbjct: 426 GIKKDAVTYNALLGGYGKQGKYEEVKRV 453
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G E+A+ + ++M+ +G + D+ T+N+L++ +CK G+++ ++ + + +V TY
Sbjct: 305 GLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTY 364
Query: 84 KILIPAVSKAGMIDEAFRLLHN-------LVEDGHNPFPSLYA----------------- 119
+I +KAG +DEA L + L +N S+YA
Sbjct: 365 STVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMES 424
Query: 120 -----------PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
++ G ++G++++ F E+K + PN Y+TLI + +GG + E
Sbjct: 425 SGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQE 484
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGL 195
A E + GL + + D L
Sbjct: 485 AMEVFREFKKAGLKADVVLYSALIDAL 511
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
+++I + + G+VE ++ + G V + LI A ++G DEA ++ +
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 109 DGHNPFPSLYAPIIKGAFRRG-QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
G P Y +I + G F+ A F E+ G P+R + +L+ +CGRGG +
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWE 308
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
A N EM G+ ++ + D + G+ DLA +I
Sbjct: 309 AARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQI 348
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 1/182 (0%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G +E AK + + +G + F++LI +SG + ++++ ++ G ++ TY
Sbjct: 199 GQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTY 258
Query: 84 KILIPAVSKAGM-IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+I A K G+ + A + ++ +G P + ++ R G ++ A FSE+
Sbjct: 259 NAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEML 318
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G + Y TL+ +GG+ A + EM + P + V DG G+ D
Sbjct: 319 YRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLD 378
Query: 203 LA 204
A
Sbjct: 379 EA 380
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + + G ++ A + + +G+ ++ +I R G D+A F +K G
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 146 HPPNRPVYTTLITMCGRGG-RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN Y +I CG+GG F AA EM G+ P F+ + L CG+ L
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSL---LAVCGRGGLW 307
Query: 205 EKIEQL 210
E L
Sbjct: 308 EAARNL 313
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 33/222 (14%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY--SVCK 73
L+ L G +ESA +++M K+G P++ T+NS+I+ +SG E ++ Y +V K
Sbjct: 507 LIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETNVSK 566
Query: 74 LGSCA----------------DVSTYKILIP-AVSKAGMIDEAFR----------LLHNL 106
+ S + D KI A K + R + H +
Sbjct: 567 MSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKM 626
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR- 165
E P ++ I+ R F+DA E+++ + + L+ G G
Sbjct: 627 HELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM---GYGDNV 683
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+V+A + E+ +M + S ++ +TD L + G+ A+ +
Sbjct: 684 WVQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLV 725
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V +QGL AG ++ A +M +M ++G +P+ F +LI+ CK G
Sbjct: 305 MAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGN 364
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E++ + G D+ Y L + + + A ++ + +G P Y
Sbjct: 365 VAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTT 424
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A E+ +G + YTTLI+ + GR V++ L EM E G
Sbjct: 425 LIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAG 484
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + + +V D C D+ + L+
Sbjct: 485 LEPDNTTYTMVIDAF--CKNSDVKTGFKLLK 513
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P + ++L++ ++ +G L SA+ M ++M+++G P + TFN+L+ +CK+ ++
Sbjct: 237 DAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLN 296
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + K G DV TY + + KAG I +A + + E G NP ++ +I
Sbjct: 297 SANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLI 356
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ G E+ +G + Y L R A + + EM GL
Sbjct: 357 DAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLK 416
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + DG G+ D+A +++Q
Sbjct: 417 PDKVTYTTLIDGFCKEGELDMAMEMKQ 443
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G + + L GL L++A +V +M G PD T+ +LI+ CK GE
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGE 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +EM + G D TY LI +SK+G ++ R+L ++E G P + Y
Sbjct: 435 LDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTM 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + F E++ KG P Y ++ G+ A L M +G
Sbjct: 495 VIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P ++++ DG GK AE+++
Sbjct: 555 VCPDDITYNILLDGHCKHGKVRDAEELKS 583
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V +L+ GL A + A+Q++ KM+ G P++ T++++I +CK G+
Sbjct: 258 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQ 317
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E++ + + +V T+ ILI + KA I+EA +L H + E G P Y
Sbjct: 318 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 377
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + Q D+AF F I G N Y+TL GR +A + +
Sbjct: 378 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 437
Query: 180 GLTP 183
G +P
Sbjct: 438 GFSP 441
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 14 DLLVQGLLNA-GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+ ++Q L N +E A +++ +I +G P + FN +I CK+ +++ ++ +
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G +V T+ ILI + KA + EA +LL +V G +P Y+ +I G ++GQ D
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD 319
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA+ F ++ + PPN + LI + R EA M E G P ++ +
Sbjct: 320 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 379
Query: 193 DGL 195
DGL
Sbjct: 380 DGL 382
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV L AG + A+ M+ +M+ QG PD TF++LI+ +CK G E +
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183
Query: 68 YYSVCKLGSCADVSTYKILIPAV-SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
V + G + ++ +I + +K ++ A ++L ++ G P ++ +I G
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ D A+ + KG PN +T LIT + R EA L +M G +P
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQL 210
+ V +GL G+ D A ++ QL
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQL 327
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++G +AG L+ A Q++ +M G + + +L++ +C +G V +E + ++ K
Sbjct: 62 ILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK- 120
Query: 75 GSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
CA DV TY L+ A+ KAG DEA +L +V G P ++ +I G + G +
Sbjct: 121 -DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
AF ++ +G + + T+I +C + A+ L + G TP F+LV
Sbjct: 180 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 239
Query: 193 DGLKNCGKHDLAEKIEQLEV 212
+G C DL + LEV
Sbjct: 240 NGF--CKAKDLDSAYKLLEV 257
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++GF V + L+ GL + A Q+ M+ G P++ T N +I +C + +
Sbjct: 577 MSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAK 636
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V+ E+ + KLG C D+ T LI K+G D A +LL + E G P
Sbjct: 637 VDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 689
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 3/194 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS---DPDLETFNSLIETICK 57
M+ +G +L+V+G+ A + A ++ ++I + +P ++L+E++C+
Sbjct: 504 MAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 563
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+ + ++ + + + G A VS+Y L+ +S+ DEA ++ +V G P S
Sbjct: 564 VGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+I + DDA+ + G P+ TLI + GR A L EMT
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 683
Query: 178 EMGLTPISRCFDLV 191
E GL P DL+
Sbjct: 684 EAGLEPNDTTHDLL 697
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 7/212 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KGF P V ++ GL + E A Q+ + M +G D +N ++E + ++ +
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528
Query: 61 VEFCVEMYYSVC-----KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
+ + + V K + S L+ ++ + G D+A +LLH + E G
Sbjct: 529 HDKALAVLEQVIDKRDRKFNPSS--SAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAV 586
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
S Y ++ G R ++D+A F + G P +I+ + +A +
Sbjct: 587 SSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQR 646
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M+++G P + + G G+ DLA K+
Sbjct: 647 MSKLGCCPDIETCNTLIGGYCKSGRADLARKL 678
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY ILI S AG +D A +LL + G ++ ++KG G+ +A F +
Sbjct: 59 TYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 118
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K P+ YT L+ + G+F EA L EM G P + F + DGL G
Sbjct: 119 A-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSE 177
Query: 202 DLAEKI 207
+ A ++
Sbjct: 178 EQAFRV 183
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ DKGF+P + L+ ++V +M +G P + T ++++ + +
Sbjct: 434 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 493
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED---GHNPFPSL 117
E ++++ S+ G D Y +++ +++A D+A +L +++ NP S
Sbjct: 494 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSA 553
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+++ + G+ DDA ++ +G Y L++ R R+ EA M
Sbjct: 554 VDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMV 613
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G P ++V L + K D A ++ Q
Sbjct: 614 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQ 645
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 3/201 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L G G + A ++ + ++ +G PDL T+ SLI CK+ VE+ + G
Sbjct: 414 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 473
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V+T ++ + + + A +L ++ G +Y +++G R + D A
Sbjct: 474 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKAL 533
Query: 136 CFFSEI---KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
++ + + P+ L+ + G+ +A L +M+E G ++ +
Sbjct: 534 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLL 593
Query: 193 DGLKNCGKHDLAEKIEQLEVS 213
GL + D A ++ + VS
Sbjct: 594 SGLSRLQRWDEATQVFEAMVS 614
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
EA L N + P Y +I+G G D A E+K G N V+TTL+
Sbjct: 40 EALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLM 99
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
GR VEA + M + P + + L GK D A+
Sbjct: 100 KGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQ 146
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++ G ++G + A + KM G +P++ T++SL+ +CK+G
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY+ L+ + G + E LL +V +G P ++
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ + D A FS+++ G PN Y T+I + + G +A Y +M + G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + GL C K D AE++
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEEL 468
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ GL + A++++ +M+ +G + FNS+I++ CK G
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G D+ TY LI AG +DEA +LL ++V G P Y
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + DDA F E+ G PN Y ++ R A + +T+ G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 617 TQLELSTYNIILHGL 631
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ---GSDPDLETFNSLIETICK 57
M++ G P V + L++GL + + A ++++ M GS PD+ ++N+++ K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+ + Y+ + G DV TY +I A+ KA +D+A +L+ +V++G P
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y I+ G GQ +A +++ G PN Y++L+ + GR EA MT
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333
Query: 178 EMGLTP 183
+ GL P
Sbjct: 334 KRGLEP 339
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G PD FN LI K +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G +V Y +I + K+G +D+A ++++G P +Y
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++D A E+ +G N + ++I + GR +E+ M +G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P ++ + DG GK D A K+ VS+
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ L G A+++ + M K+G +PD+ T+ +L++ G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 61 VEFCVEMYYSV---CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ VEM+ + + G D + ILI A +K +D+A + + + G NP
Sbjct: 357 L---VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I + G DDA +F ++ +G PN VYT+LI ++ +A ++EM
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ G+ + F+ + D G+ +EK+ L V +
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 510
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + ++ G G + A ++M+ +G PD+ T++S+I +CK+ ++
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ ++ K G D TY ++ +G EA L + DG P Y+ ++
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +A F + +G P+ Y TL+ G VE L M G+ P
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 185 SRCFDLV 191
F+++
Sbjct: 376 HHVFNIL 382
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A + +M+ G P++ T+N +++ + +
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y S+ K G+ ++STY I++ + K + DEA R+ NL +
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ G P+ Y+ + G E + + M E G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721
Query: 181 LTPISRCFDLVTDGL 195
+ SR + + L
Sbjct: 722 CSADSRMLNSIVRKL 736
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL + +AK++ + K G+ +L T+N ++ +CK+
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + T+ I+I A+ K G +DEA L +G P Y+
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G + + +++ + G A YL + E
Sbjct: 697 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 4/198 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V +L+ AG L+ + ++K+G D TF L++ +C ++
Sbjct: 89 TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148
Query: 67 MYY-SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED---GHNPFPSLYAPII 122
+ + +LG DV +Y L+ + EA LLH + +D G P Y ++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G F+ G D A+ + E+ +G P+ Y+++I + +A L M + G+
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 268
Query: 183 PISRCFDLVTDGLKNCGK 200
P ++ + G + G+
Sbjct: 269 PDCMTYNSILHGYCSSGQ 286
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 5/194 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ ++ A + +KM + G +P++ + ++I+ +CKSG
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G ++ Y LI + D+A L+ +++ G +
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ ++ F + G P+ Y TLI C G+ EA L M +G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 181 LTPISRCFDLVTDG 194
+ P D+VT G
Sbjct: 547 VKP-----DIVTYG 555
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ V TY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTY 95
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
ILI +AG +D F L N+V+ G + P++KG + DA
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++L+ G L A +++ +M +G +P+ T+N+ + +CK G+
Sbjct: 71 MRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ ++ + DV Y LI + +AG + EA+ LL + G P P Y
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 121 IIK-----------------------------------GAFRRGQFDDAFCFFSEIKIKG 145
I+ G R + DDA ++K G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
P +Y TLI R GR EA L EM GL+P SR + L+
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P V +LV GL A L A ++V M ++G P+ FN +++ +CK G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +G + TY ILI K + A +L + GH P Y
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + G+ DDA F + K + YTTLI + G+ EA + L EM G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P C++ + L + + A K+
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKL 207
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
+S +G +P ++ ++LV+ L G L+ A+++ +M + G+ PD+ T+ +I+ +C++
Sbjct: 171 LSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM-RDGNAVAPDVYTYTVMIKALCRA 229
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GE++ M + + G V TY +L+ A+ ++G ++EAF+L +VE P +
Sbjct: 230 GEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTF 289
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G R +F + E++ G PN +Y LI R G EA EM
Sbjct: 290 GILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVS 349
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ ++L+ L G+ + AE+I
Sbjct: 350 KGIKQTVVTYNLIAKALCKEGEMEHAEQI 378
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG + + L+ GL ++ A +++ M+ G + D T+N +I+ CK+ ++E
Sbjct: 456 KGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEE 515
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + K G D+ T+ + A G +++ LL + +G P Y II
Sbjct: 516 AIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIID 575
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + A + E+ G PN +Y LI GR G +A L M G+ P
Sbjct: 576 GYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQP 635
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 38/242 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + + ++ N G +E ++++M +G PD+ T+ ++I+ CK+ +
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP----S 116
V + + K G + Y LI + G I +A +L + +G P P S
Sbjct: 583 VHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNS 642
Query: 117 L-------------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L Y II+G + G+ D+A +F E+ +
Sbjct: 643 LMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRD 702
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN+ YTTL+ + G EA EM G+ P + ++ + G C + D +
Sbjct: 703 IRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISG---CCEVDSLD 759
Query: 206 KI 207
KI
Sbjct: 760 KI 761
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ L AG +++A M+ ++ + G P + T+N L++ +C+SG VE ++
Sbjct: 214 PDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQL 273
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + T+ ILI +++ E +L + G P +Y +I R
Sbjct: 274 KGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCR 333
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F E+ KG Y + + G A L EM G+T
Sbjct: 334 EGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSL 393
Query: 188 FD-LVTDGLKNCGKHDLAEKI 207
F+ +V L+ G+ D+ ++
Sbjct: 394 FNSVVAWHLRGTGRLDVVLRL 414
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
+Q L G E A ++ ++ +G ++ T N+LI +C+ ++ ++ ++ G
Sbjct: 434 IQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGV 493
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
D TY I+I KA ++EA +L ++++ G P + ++ G+ +D
Sbjct: 494 EFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILH 553
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
++K +G P+ Y T+I + +A YL+E+ + GL P + ++ + G
Sbjct: 554 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGG 611
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 1/182 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + +L+ GL ++ +M G P+ +N LI C+ G
Sbjct: 277 MVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGH 336
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G V TY ++ A+ K G ++ A ++L ++ G SL+
Sbjct: 337 CSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNS 396
Query: 121 IIKGAFR-RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ R G+ D E+ + PN V T I + G+ EAA +
Sbjct: 397 VVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGK 456
Query: 180 GL 181
GL
Sbjct: 457 GL 458
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G+ A ++ ++M+ +G + T+N + + +CK GE+E ++ + G S +
Sbjct: 335 GHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLF 394
Query: 84 KILIPA-VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
++ + G +D RL+ +V P ++ I+ +RG+ ++A + +
Sbjct: 395 NSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVL 454
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
KG N LI +G EA L M + G+ FD +T
Sbjct: 455 GKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVE-----FDRIT 499
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++ G ++G + A + KM G +P++ T++SL+ +CK+G
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY+ L+ + G + E LL +V +G P ++
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ + D A FS+++ G PN Y T+I + + G +A Y +M + G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + GL C K D AE++
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEEL 468
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ GL + A++++ +M+ +G + FNS+I++ CK G
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G D+ TY LI AG +DEA +LL ++V G P Y
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + DDA F E+ G PN Y ++ R A + +T+ G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 617 TQLELSTYNIILHGL 631
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ---GSDPDLETFNSLIETICK 57
M++ G P V + L++GL + + A ++++ M GS PD+ ++N+++ K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+ + Y+ + G DV TY +I A+ KA +D+A +L+ +V++G P
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y I+ G GQ +A +++ G PN Y++L+ + GR EA MT
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333
Query: 178 EMGLTP 183
+ GL P
Sbjct: 334 KRGLEP 339
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + L+QG G L +++ M++ G PD FN LI K +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G +V Y +I + K+G +D+A ++++G P +Y
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++D A E+ +G N + ++I + GR +E+ M +G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P ++ + DG GK D A K+ VS+
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ L G A+++ + M K+G +PD+ T+ +L++ G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 61 VEFCVEMYYSV---CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ VEM+ + + G D + ILI A +K +D+A + + + G NP
Sbjct: 357 L---VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I + G DDA +F ++ +G PN VYT+LI ++ +A ++EM
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ G+ + F+ + D G+ +EK+ L V +
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 510
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + ++ G G + A ++M+ +G PD+ T++S+I +CK+ ++
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ ++ K G D TY ++ +G EA L + DG P Y+ ++
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +A F + +G P+ Y TL+ G VE L M G+ P
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 185 SRCFDLV 191
F+++
Sbjct: 376 HHVFNIL 382
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A + +M+ G P++ T+N +++ + +
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y S+ K G+ ++STY I++ + K + DEA R+ NL +
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ G P+ Y+ + G E + + M E G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721
Query: 181 LTPISRCFDLVTDGL 195
+ SR + + L
Sbjct: 722 CSADSRMLNSIVRKL 736
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL + +AK++ + K G+ +L T+N ++ +CK+
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + T+ I+I A+ K G +DEA L +G P Y+
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G + + +++ + G A YL + E
Sbjct: 697 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 4/197 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L+ AG L+ + ++K+G D TF L++ +C +++
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 68 YY-SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED---GHNPFPSLYAPIIK 123
+ +LG DV +Y L+ + EA LLH + +D G P Y ++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G F+ G D A+ + E+ +G P+ Y+++I + +A L M + G+ P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 184 ISRCFDLVTDGLKNCGK 200
++ + G + G+
Sbjct: 270 DCMTYNSILHGYCSSGQ 286
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 5/194 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ ++ A + +KM + G +P++ + ++I+ +CKSG
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G ++ Y LI + D+A L+ +++ G +
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ ++ F + G P+ Y TLI C G+ EA L M +G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 181 LTPISRCFDLVTDG 194
+ P D+VT G
Sbjct: 547 VKP-----DIVTYG 555
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ V TY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTY 95
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
ILI +AG +D F L N+V+ G + P++KG + DA
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ GL G A +M ++M+ +G P+++ + L+ ++C +G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V++ S+ G D TY + + K G ++EAF+ L L + G Y+
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ +FD+ F ++ + + P+ +YT +I C GR +A ++L M + G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + C++ V L + G + A +
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V+ +L+ L NAG ++ A Q++ M +G PD T+N+ + +CK G
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G + Y LI + +A DE F ++E +P LY
Sbjct: 293 VNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTI 352
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+ +DA F +K KG P+ Y T++ + G A EM +
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L S ++ GL G D A +I
Sbjct: 413 LVLDSTTQTIMICGLCKRGLVDEAMQI 439
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL--------------E 46
M + G +P V + L+ G G LE A+ + +KM + G++P L E
Sbjct: 443 MGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSE 501
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ L+ +C+SG+V ++ S+ G DV TY LI + KA +D A RL L
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G +P Y +I G R + +DA F I G P+ +Y +++ R +
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKL 621
Query: 167 VEAANYLME 175
+A N ++
Sbjct: 622 SQAINLWLD 630
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P V ++++G AG +E A ++ M K+G PD +N++++ +C G+
Sbjct: 338 MLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGD 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + D +T I+I + K G++DEA ++ + E G +P Y
Sbjct: 398 LERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNA 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP--------------NRPVYTTLITMCGRGGRF 166
+I G +R G+ ++A F ++++ +P + + + MC + G+
Sbjct: 458 LIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMC-QSGQV 516
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++A L + + G+ P ++ + +GL
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV--- 71
+++ GL G ++ A Q+ ++M + G DP + T+N+LI+ + G +E +++ +
Sbjct: 422 IMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMG 481
Query: 72 --------CKLGS--CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
LG+ D + + L+ + ++G + +A++LL ++++ G P Y +
Sbjct: 482 NNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTL 541
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + D A F E+++KG P+ Y TLI R R +A + + G
Sbjct: 542 INGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS 601
Query: 182 TP 183
+P
Sbjct: 602 SP 603
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
F +L+ +G V+ + + + S Y ++ A+ +G+I A L +
Sbjct: 138 SAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNR 197
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+V G P + Y ++ G ++G DA F E+ +G PN +YT L++ G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EA L M + G P ++ GL G+
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
A S + L+ A S AG +A + + E P +Y I+K G A
Sbjct: 135 ASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
++ + G PNR Y L+ + G +A EM + G+ P + + ++ L N
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254
Query: 198 CGKHDLAEKI 207
GK D A ++
Sbjct: 255 AGKIDEAVQL 264
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 1/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSG 59
M F P + D+L+ GL A L A+ ++ + + P++ ++N+LI+ K+
Sbjct: 318 MKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAA 377
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V +++ + G DV TY LI + AG EA L +V P +Y+
Sbjct: 378 RVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYS 437
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R G+ D A F + G PN VY +LI + GR +A + EMTE
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTER 497
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
G +P + + GL + D A
Sbjct: 498 GCSPDGVTYGTLIVGLCRWSRTDEA 522
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ G AG + A ++ M ++G D T+N+LI C+ E++ E+
Sbjct: 255 PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYEL 314
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFPSLYAPIIKGAF 126
+ D+ TY ILI + +A + EA LL L ED P Y +I G
Sbjct: 315 LEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFS 374
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ + +DA+ F E+ G P+ Y+TLI GR EA +YL EM + P
Sbjct: 375 KAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVP 434
Query: 187 CFDLVTDGLKNCGKHDLAEKI 207
+ V GL G+ D A +
Sbjct: 435 VYSSVISGLCRAGELDAASTV 455
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ + L+ G ++ A +++ +M PD+ T++ LI +C++
Sbjct: 283 MKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKR 342
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ ++ ++ C +V +Y LI SKA +++A++L +V G +P Y+
Sbjct: 343 LSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYS 402
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+G G+ +A + E+ K P PVY+++I+ R G A+ M
Sbjct: 403 TLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVAN 462
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G P ++ + GL G+
Sbjct: 463 GCQPNLAVYNSLIYGLCKTGR 483
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V + L+ G A + A Q+ +M+ G PD+ T+++LI +C +G
Sbjct: 360 TPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHS 419
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ V Y +I + +AG +D A + ++V +G P ++Y +I G
Sbjct: 420 YLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLC 479
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G+ DA E+ +G P+ Y TLI R R EA + + E G+
Sbjct: 480 KTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+ + F V + + L+ G E A ++ + Q PD T+ LI +C G++
Sbjct: 82 TRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKL 141
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ +Y + G V T K L+ A+ K+G ++ A R + P + + +
Sbjct: 142 KLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKM---SSIPCAATWTIL 198
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
I G FR + D+A +F E+K PN YT +I + G+ EA L EM
Sbjct: 199 IDGLFRAIRVDEACYYFEEMK-HTAIPNNWTYTVVINGLVKAGKVAEAERVLQEM 252
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 3/194 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L L A+Q++ MI G PD T ++L+ +C+ + + + +LG
Sbjct: 576 VIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLG 635
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS--LYAPIIKGAFRRGQFDD 133
S V TY L+ A+ KAG EA +L L+ + FP Y +I + Q ++
Sbjct: 636 SKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHT-SCFPDELWYVGLIAAYSNQDQVEE 694
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+K K + Y TL+ R L EM F+++
Sbjct: 695 ARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQ 754
Query: 194 GLKNCGKHDLAEKI 207
G G+ D A ++
Sbjct: 755 GFCRLGQTDRAVRV 768
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ GL G L AK V +M ++G PD T+ +LI +C+
Sbjct: 459 MVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSR 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + G ++ ++I ++ +++A R+L ++ G++P YA
Sbjct: 519 TDEACDLYVRSLEQGIEISETSCNVVIASLR---CLEQAQRVLRVVLATGNSPTAFFYAT 575
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + +A ++ G P+ L+ R + V A +L EM +G
Sbjct: 576 VIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLG 635
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + L GK
Sbjct: 636 SKPSVGTYSTLLNALFKAGK 655
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 4/172 (2%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
+Q + T+N E + ++G+ E ++ D TY ILI + G +
Sbjct: 83 RQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLK 142
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
A L +V+ G P ++ + G + A +F ++ P +T LI
Sbjct: 143 LACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKM---SSIPCAATWTILI 199
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
R R EA Y EM + P + + +V +GL GK AE++ Q
Sbjct: 200 DGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQ 250
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL G L+ A ++ N+M+ G P+ TF +LI CK+ +
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + G D+ TY LI + K G + + L+ ++ +G P Y
Sbjct: 257 VDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + A +++ + + YT LI+ R GR +A L EM +G
Sbjct: 317 LIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
L P + + ++ + C K D
Sbjct: 377 LKPDNGTYTMIINEF--CKKRD 396
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+Q G + A+ + + + K G P + +FN+LI K G+++ + ++
Sbjct: 140 NILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G+ DV TY ILI + K G +DEA L + ++++G P + +I G + + D
Sbjct: 200 SGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ +G P+ Y TLI + G + + + EM GL P + + D
Sbjct: 260 AMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G +C + DL +E
Sbjct: 320 G--SCKEGDLEIALE 332
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L++ CK GE+ ++ ++ K G
Sbjct: 107 VLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ LI K G +DE FRL + G P Y+ +I G + G+ D+A
Sbjct: 167 LRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G PN +TTLI + + A +M GL+P ++ + GL
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGL 286
Query: 196 KNCGK----HDLAEKI 207
G+ HDL +++
Sbjct: 287 CKKGELKQVHDLIDEM 302
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + + L+ GL G L+ ++++MI G PD ++ +LI+ CK G+
Sbjct: 267 MLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
II ++ A E++ G P
Sbjct: 387 IINEFCKKRDSKTASKLLREMQRDGPLP 414
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G++ A Q + +T ++E + + + + Y V + G
Sbjct: 72 LMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G + A + + + G P + +I G + G D+ F
Sbjct: 132 YPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + G+ EA EM + GL P F + G
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251
Query: 196 KNCGKHDLAEKI 207
K DLA +I
Sbjct: 252 CKNEKVDLAMEI 263
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+QG G L A+++V ++ +G P + +F SLI +CK G
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + + G ADV+ + LI G + EAFR+ +V G P Y
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DD F E+ KG P Y ++ GR A EM E G
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626
Query: 181 LTPISRCFDLVTDGL--KNC 198
+ + ++ GL NC
Sbjct: 627 IAVTIPTYSILLTGLCRNNC 646
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP V ++ G ++ A N MI +G +P+ + LI+ C G+
Sbjct: 412 MQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGD 471
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ Y + G + ++ LI + K G + EA R+ ++ G +++
Sbjct: 472 LVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTS 531
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +AF + G P+ Y TL+ C + GR + E+ G
Sbjct: 532 LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + + ++ DGL + G+ A+++ Q
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEMFQ 620
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL G + A + ++M +QG P++ T+NS+I +CK+ V+ + + G
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI S G +A R+ + G P + + + G+ ++A
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FF + KGH N Y+TL+ G V+ +N M G+ P F+++ +G
Sbjct: 337 EFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396
Query: 196 KNCG 199
CG
Sbjct: 397 AKCG 400
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L G +E A++ + M+ +G ++ ++++L+ +G
Sbjct: 307 MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGC 366
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + + IL+ +K GM+ EA + ++ + G NP Y
Sbjct: 367 LVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLA 426
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G DDA F+ + KG PN VY LI G V+A + E+ G
Sbjct: 427 VIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG 486
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F + + L G+ A++I
Sbjct: 487 LGPCILSFASLINHLCKEGRVFEAQRI 513
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 5/191 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG P + L+ L G + A+++ + +I+ G D+ F SLI+ C G+
Sbjct: 482 IRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGK 541
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ +G D+ TY L+ K G ID+ L L+ G P Y
Sbjct: 542 MSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGI 601
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G F G+ A F E+ G P Y+ L+T R EA ++ M
Sbjct: 602 ILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMN 661
Query: 181 LTPISRCFDLV 191
+ FD+V
Sbjct: 662 VK-----FDIV 667
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 89/214 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + L+ G AG L + N M++ G P+ FN L+ K G
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + K G DV TY +I A + G +D+A +++++ G P ++Y
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A EI+ KG P + +LI + GR EA + G
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG 521
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
F + DG GK A ++ VS+
Sbjct: 522 EKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSV 555
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V + ++ L A ++ A+ ++ +M+ G PD T+N+LI G+
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V M+ + G + T + + K G I+EA +++ GH Y+
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G D F+ + G PN+ V+ L+ + G EA +M + G
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416
Query: 181 LTP 183
L P
Sbjct: 417 LNP 419
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDP--DLETFNSLIETICKS 58
M + G P +++ + + G + A ++ +KQG ++ +++++ + K
Sbjct: 165 MPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKE 224
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+V ++++ + + G +V TY +I A+ KA +D+A +L +V +G P Y
Sbjct: 225 GKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTY 284
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G GQ+ A F E+ +G PN +T + + GR EA + M
Sbjct: 285 NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA 344
Query: 179 MG 180
G
Sbjct: 345 KG 346
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P +++ GL +AG +AK+M +MI+ G + T++ L+ +C++ E
Sbjct: 590 KGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEE 649
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ +C + D+ I+I + KA +EA L ++ + G P Y +++
Sbjct: 650 AITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMME 709
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+ G ++A FS + G P ++ G V+A Y+
Sbjct: 710 NLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYM 759
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 16 LVQGLLNAGYL-ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCK 73
L++GL +A E+ + ++M + G PD +++++++++C G ++ ++ + +V +
Sbjct: 144 LLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQ 203
Query: 74 LGSC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G C +V Y ++ + K G + EA L H + + G P Y +I + D
Sbjct: 204 GGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVD 263
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A ++ G P+ Y TLI G++ +A EMT G+ P
Sbjct: 264 KAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIP 314
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE- 66
P V +L+ A L+ A +++QG D+ +SL+ +C + + V+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---LYAPIIK 123
+++ + +LG D +Y ++ +V G A +L V+ G P +Y+ ++
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQG-GGCPCNVVVYSTVVH 219
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G F+ G+ +A F E+ +G PPN Y ++I + +A L +M G+ P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+ ++ + G G+ A ++ + E++ R V
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFK-EMTSRGV 312
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 79/200 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + LV G G ++ + +++ +G P T+ +++ + +G
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
EM+ + + G + TY IL+ + + +EA + L +
Sbjct: 612 TAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNI 671
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I F+ + ++A F+ I G P YT ++ + G EA M + G
Sbjct: 672 MISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L+P S +++ L G+
Sbjct: 732 LSPTSHFINVIVRTLLEKGE 751
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + ++ GL G E A +N++++ G PD T+N+++ C+ G+
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGD 573
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + DV T IL+ + GM+++A +L + V G Y
Sbjct: 574 VEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNT 633
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DDAF SE++ K P+ Y +IT GR EA ++ +M E G
Sbjct: 634 LITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Query: 181 LTP 183
P
Sbjct: 694 XLP 696
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++LV G G+L+ A ++ M + PD+ T+N LI +C G
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + L DV +Y LI + I EAF+LL + E G P +
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K + G+ DDA ++++ G P+ Y TLI + G EA M EMG
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA---FRTMDEMG 445
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ ++M ++ P T+N +I +C+ G+ E + + + G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +TY ++ + G +++AF+ + +VE+ P +++G G + A
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ KG + Y TLIT + GR +A N L EM E L P ++ + L
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673
Query: 196 KNCGKHDLAEK 206
+ G+ AE+
Sbjct: 674 TDSGRIREAEE 684
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++++ G + A + +N M K PD T+N++++ +CK G +
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDA 262
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G + +TY IL+ K G + EA ++ + ++ P Y +I G
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ ++AF E++ P+ Y TLI C + EA L EM+E G+ P
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382
Query: 185 SRCFDLVTDGLKNCGKHDLAEK-IEQLEVS 213
+ +++ GK D A I ++E S
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEES 412
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ ++ L G L A+ ++ M +G P+ T+N L+ CK G ++ + + +
Sbjct: 247 NTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
DV TY +LI + G I+EAF+L + P Y +I G + +
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF E+ KG PN + ++ + G+ +A+N + +M E G +P ++ + +
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426
Query: 194 G 194
G
Sbjct: 427 G 427
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 3/197 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK---SGEVEFCVEMYYS 70
D + + +G A Q+ KM + P+L T N+L+ ++ + S V F E +
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
KLG +V+T+ I+I +A L+ + + +P Y I+ ++G+
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGR 258
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
DA ++K +G PNR Y L+ + G EAAN + MT+ L P +++
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318
Query: 191 VTDGLKNCGKHDLAEKI 207
+ +GL N G+ + A K+
Sbjct: 319 LINGLCNEGRIEEAFKL 335
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF+P + L+ G AG + A + +++M ++ D T N+++ T+C+ +
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ S K G D +Y LI K G +D A +L + E P Y
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G+ + A +E+ G P+ Y T++ R G +A + +M E
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 181 LTP 183
P
Sbjct: 589 FKP 591
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
M+ P V ++L+ GL N G +E A ++ ++M PD+ ++N+LI
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 53 ---------------------------ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ CK G+++ + + G D TY
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI KAG + EAFR + + I++ R + ++A+ S + +G
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ + Y TLI + G A EM E + P + ++ + GL CGK + A
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V ++++ GL ++ A ++ +M+ + PD T++SLI+ +CK G
Sbjct: 281 MVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGR 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G A++ TY L+ + K +D+A L + E G P Y
Sbjct: 341 ITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ F + +KG+ + YT +I+ + G F EA +M + G
Sbjct: 401 LIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNG 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+++ L ++D AEK+
Sbjct: 461 CIPNAVTFEIIIRSLLEKDENDKAEKL 487
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K NP + + L+ L G ++ +K ++ M K+G PD+ ++ L++ C GEV+
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQK 273
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G DV +Y I+I + K +DEA LL ++ P Y+ +I
Sbjct: 274 AKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLID 333
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ E+ +G P N Y +L+ + +A M+M E G+ P
Sbjct: 334 GLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP 393
Query: 184 ISRCFDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 394 NKYTYTALIDGLCKGGR 410
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ G AG L A ++N+MI + +P++ T+N+LI+T+CK G+
Sbjct: 176 MNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGK 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + K G DV Y IL+ G + +A ++ +V+ G NP Y
Sbjct: 236 VKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNI 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + + D+A E+ K P+ Y++LI + GR + EM G
Sbjct: 296 IINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG 355
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + DGL C +L + I
Sbjct: 356 QPANLVTYNSLLDGL--CKNQNLDKAI 380
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G ++ + +K++ QG D ++ L+ +CK GE
Sbjct: 75 GYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCA 134
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ ++ + DV Y +I + K ++DEA+ L + G P Y +I G
Sbjct: 135 IKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICG 194
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ +AF +E+ +K PN Y TLI + G+ E+ N L MT+ G+ P
Sbjct: 195 FCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPD 254
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ DG G+ A++I
Sbjct: 255 VVIYSILMDGYCLVGEVQKAKQI 277
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +L+ + G + + ++ K++K G P+ N+L++ +C GE
Sbjct: 36 MEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGE 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + V G D +Y IL+ + K G A +LL + + P +Y+
Sbjct: 96 VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + D+A+ +SE+ +G P+ YTTLI G+ +EA L EM
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++ + D L GK
Sbjct: 216 INPNIYTYNTLIDTLCKEGK 235
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P V +L+ G G ++ AKQ+ M++ G +PD+ ++N +I +CK
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + D TY LI + K G I L + G Y
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + D A F ++K +G PN+ YT LI +GGR + + G
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ ++ GL G D A
Sbjct: 426 YCIDVWTYTVMISGLCKEGMFDEA 449
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF +L+ GL G A +++ + + + PD+ ++++I+ +CK V+
Sbjct: 109 QGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDE 168
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++Y + G DV TY LI AG + EAF LL+ ++ NP Y +I
Sbjct: 169 AYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ ++ + + KG P+ +Y+ L+ G +A + M + G+ P
Sbjct: 229 TLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNP 288
Query: 184 ISRCFDLVTDGL 195
++++ +GL
Sbjct: 289 DVYSYNIIINGL 300
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL L+ A + KM ++G P+ T+ +LI+ +CK G ++ ++ + G
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
C DV TY ++I + K GM DEA + + ++G P + II+ + + D A
Sbjct: 426 YCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAE 485
Query: 136 CFFSEIKIKGHPPNRPVYT 154
E+ KG P R ++
Sbjct: 486 KLLHEMIAKGLLPFRNFHS 504
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + P Y
Sbjct: 244 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTT 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 304 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVG 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P SR + ++ + C K D+ +
Sbjct: 364 LKPDSRTYTMIINEF--CKKGDVWK 386
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 154 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 213
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 274 --CKKGDLKQ 281
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 149 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 208
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 209 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 268
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +K P++ YTTLI C + G A + M +
Sbjct: 269 LIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 328
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 329 IRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 365
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 177
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 178 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 237
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ L P
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPD 297
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 298 KITYTTLIDGC--CKEGDLDSAFEH 320
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M + PD T+ +LI+ CK G+
Sbjct: 254 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGD 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 314 LDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTM 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 374 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 410
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 59 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 118
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 178
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 179 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 239 CKNGRVDLAMEI 250
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS K P L+ G G L+SA + +MI++ D + +LI +C+ G
Sbjct: 289 MSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 349 SVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 408
Query: 121 IIKG 124
++ G
Sbjct: 409 LMNG 412
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + G+ G LE A M+ KM + G P T+N+LI+ C G
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G VSTY +LI A+ +DEA ++ + E G P Y
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF E+ KG P R YT+LI + + GR +A + ++ G
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA----EKIEQLEV 212
+ P F+ + DG G D A ++++Q++V
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKV 467
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P ++L+ G G ++ A + ++MI +G P T+ SLI + K G
Sbjct: 357 MSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G D+ + LI G +D AF +L + + P +
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNT 476
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ + A E+K +G P+ Y TLI+ + G +A EM +G
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P ++ + GL + D AE++ + +S
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMIS 569
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 7/215 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETI---CK 57
M + G P + L+ G N G LE A +KM+++G P + T+N LI + CK
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK 346
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
E + ++ + + G D TY ILI + G + +AF L ++ G P
Sbjct: 347 MDEADGIIK---EMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVT 403
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I +RG+ A F +I KG P+ ++ LI G A L EM
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
+M + P F+ + G GK + A E IE+++
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMK 498
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ L G ++ A + K++++G PDL FN+LI+ C +G
Sbjct: 392 MISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGN 451
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M + ++ D T+ L+ + G ++ A L+ + G P Y
Sbjct: 452 MDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNT 511
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +RG DAF E+ G P Y LI + A L EM G
Sbjct: 512 LISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKG 571
Query: 181 LTPISRCFDLVTDGLKN 197
+TP + + +G+ N
Sbjct: 572 ITPNDNTYLSLIEGIGN 588
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++L+ L ++ A ++ +M ++G PD T+N LI C+ G
Sbjct: 322 MVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGN 381
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G TY LI +SK G + +A L +V G P ++
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNA 441
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G D AF E+ P+ + TL+ R G+ A + EM G
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P ++ + G G
Sbjct: 502 IKPDHISYNTLISGYSKRG 520
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLL++ + A + + M +G P + N ++ KS E +Y + +
Sbjct: 125 DLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFR 184
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ + V T+ I+I + K G + +A + + G P Y II G RG+ +
Sbjct: 185 MRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEG 244
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F +K +G P+ Y + I+ + G+ EA+ L +M E+GL P + ++ + D
Sbjct: 245 ARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLID 304
Query: 194 GLKNCGKHDLA 204
G N G ++A
Sbjct: 305 GYCNKGNLEMA 315
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 35/234 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ L + E A + +M + + TFN +I +CK G+
Sbjct: 147 MKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGK 206
Query: 61 VEFCVE--------------MYYSVCKLGSCA---------------------DVSTYKI 85
++ E + Y+ G C+ D TY
Sbjct: 207 LKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGS 266
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
I + K G ++EA +L + E G P Y +I G +G + AF + ++ +G
Sbjct: 267 FISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREG 326
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
P Y LI + EA + EM+E GL P S ++++ +G CG
Sbjct: 327 LMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCG 380
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + L+ G G + ++ ++ +++ G PD+ TF+S+I+ +C++ +
Sbjct: 488 MQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQ 547
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G + TY ILI ++ G + + +LL + DG NP +
Sbjct: 548 IEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNA 607
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R G+ +DA FS + G P+ Y I + + GRF EA + M G
Sbjct: 608 LIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANG 667
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P S +++ D L + + A+KI +
Sbjct: 668 CMPDSFTCNIILDALVKQDQFEAAQKIAK 696
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L AG + N+M+K G ++ ++N +I+ CK+ ++ + + G
Sbjct: 433 LIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKG 492
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ T+ LI K G I ++ LL L+E G P ++ II G R Q +DA
Sbjct: 493 IPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDAL 552
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FSE+ + G PN Y LI G + L +M G+ P F+ +
Sbjct: 553 GCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSF 612
Query: 196 KNCGKHDLAEKIEQLEVSL 214
GK + A+K+ +SL
Sbjct: 613 CRMGKVEDAKKLFSSMLSL 631
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P R + ++ L+ + L+ A +M PD T+N LI +C+SG V+
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + LG +V TY ILI A +DEAFR+L + +P + I G
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
FR + AF E + R TL+ EA L + ++G P
Sbjct: 332 VFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPD 391
Query: 185 SRCFDLVTDGL 195
S F++ + L
Sbjct: 392 SATFNIAMNCL 402
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 3/190 (1%)
Query: 9 PVRGR---DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
PV R D L+ L + A ++ K K G PD TFN + + K ++
Sbjct: 353 PVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVC 412
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + G STY LI A+ AG + E + +V+DG Y +I
Sbjct: 413 NILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCF 472
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ D A F E++ KG PPN + TLI +GG ++ + L+ + E G P
Sbjct: 473 CKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDI 532
Query: 186 RCFDLVTDGL 195
F + DGL
Sbjct: 533 FTFSSIIDGL 542
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ GF P + ++ GL A +E A ++M+ G P+ T+N LI ++C G+V
Sbjct: 525 EHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVP 584
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+++ + G DV ++ LI + + G +++A +L +++ G P Y I
Sbjct: 585 RSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFI 644
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
K + G+F++A F ++ G P+ ++ + +F A +E G+
Sbjct: 645 KVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGI 703
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V + L+Q G +E AK++ + M+ G PD T+ + I+ C+SG
Sbjct: 593 MQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGR 652
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
E++ S+ G D T I++ A+ K + A ++ E G
Sbjct: 653 FNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWG 702
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 5/180 (2%)
Query: 9 PVRGRDLLVQGLL-----NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
P+ +D V+G+L G + + +++ + G + E LI + + G ++
Sbjct: 141 PLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKY 200
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
C E++ + LG Y +I A+ K+ +D A+ + D P Y +I
Sbjct: 201 CDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIH 260
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G D+A +++ G+ PN YT LI + EA L M ++P
Sbjct: 261 GVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSP 320
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%)
Query: 51 LIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
L + + G V VE+ + G + ILI + + G+ + + G
Sbjct: 153 LANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLG 212
Query: 111 HNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
+P LY +I + D A+ F ++ P+R Y LI R G EA
Sbjct: 213 ISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEAL 272
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +M +G +P + ++ DG N K D A ++
Sbjct: 273 RLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRV 309
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGY-LESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M D G P + + ++ G + ++ ++M++ G PD TFNSL+ K G
Sbjct: 138 MKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGG 197
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
E + + G D+ TY L+ AV K G +D AF ++ + P Y+
Sbjct: 198 LWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYS 257
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ DDA F+E+K G +R Y TL+++ + GRF EA + EM
Sbjct: 258 TMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENS 317
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ ++ + G K+D+ K+
Sbjct: 318 GIRKDVVTYNALLGGYGKQYKYDVVRKV 345
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G E+A+ + +M+ +G D D+ T+N+L++ +CK G+++ E+ + +V TY
Sbjct: 197 GLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTY 256
Query: 84 KILIPAVSKAGMIDEAFRLLH-------NLVEDGHNPFPSLYA----------------- 119
+I +KAG +D+A L + +L +N S+YA
Sbjct: 257 STMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMEN 316
Query: 120 -----------PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
++ G ++ ++D F E+K + PN Y+TLI + +GG + E
Sbjct: 317 SGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYRE 376
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGL 195
A + E + GL + + D L
Sbjct: 377 AMDVFREFKKAGLKADVVLYSALIDAL 403
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 36/203 (17%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L G +E AK + + +G + F+++I +SG ++++YS+ G
Sbjct: 83 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142
Query: 76 SCADVSTYKILIPAVSKAGM-IDEAFRLLHNLVEDGHNP----FPSLYAPIIKGAF---- 126
++ TY +I A K G+ + ++ +G P F SL A KG
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202
Query: 127 ---------------------------RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+ GQ D AF SE+ K PN Y+T+I
Sbjct: 203 RSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDG 262
Query: 160 CGRGGRFVEAANYLMEMTEMGLT 182
+ GR +A N EM +G++
Sbjct: 263 YAKAGRLDDARNLFNEMKFLGIS 285
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 71/197 (36%), Gaps = 35/197 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++ G AG L+ A+ + N+M G D ++N+L+ K G
Sbjct: 244 MPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGR 303
Query: 61 VE----FCVEMYYSVCK---------LGSCA----------------------DVSTYKI 85
E C EM S + LG ++ TY
Sbjct: 304 FEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYST 363
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI SK G+ EA + + G LY+ +I + G + A E+ +G
Sbjct: 364 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 423
Query: 146 HPPNRPVYTTLITMCGR 162
PN Y ++I GR
Sbjct: 424 IRPNVVTYNSIIDAFGR 440
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + + G ++ A + + +G+ ++ II R G ++A F +K G
Sbjct: 83 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142
Query: 146 HPPNRPVYTTLITMCGRGG-RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN Y +I CG+GG F EM G+ P F+ + L C K L
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSL---LAVCSKGGLW 199
Query: 205 EKIEQL 210
E L
Sbjct: 200 EAARSL 205
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G V L+ L G +ESA ++++M K+G P++ T+NS+I+ + E
Sbjct: 388 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESV 447
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIK 123
V+ G +++ + AV KA +LV D N ++ +
Sbjct: 448 VD------DAGQTSELQIDSLSSSAVEKA---------TKSLVADREDNRIIKIFGQL-- 490
Query: 124 GAFRRGQFDDA-----------FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
A + GQ ++ F E++IK PN ++ ++ C R F EA+
Sbjct: 491 AAEKAGQAKNSGGQEMMCILGVFHKMHELEIK---PNVVTFSAILNACSRCNSFEEASML 547
Query: 173 LMEM 176
L E+
Sbjct: 548 LEEL 551
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + VYT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 383 LNPDTGTYTMIINEF--CKKGDVWK 405
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+Y L+ + G++DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDAD 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G D TY LI K G +D AF ++++ +Y +I
Sbjct: 301 AHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P + L+ G + G L+ ++ + M+ G PD+ T++ LI + K +
Sbjct: 168 ITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A ++ KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
+ + + GL G+ AEK+ E L V L
Sbjct: 348 IRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGL 383
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P ++N+L+ + G ++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI +SK +D+A L ++ G P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + +M+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KITYTTLIDGC--CKEGDLDSAFEH 339
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A +++ M ++G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G NP Y
Sbjct: 333 LDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L+SA + +MI++ D + +LI +C+ G
Sbjct: 308 MSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ L G L A+ + +M G PD+ T+NSLI+ K G++E ++
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G ADV TY LI SK G +++A+ + G ++ + +
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F++++++G PN YT+L+ + GR +A L EM GL P
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
+ ++ DGL GK A+ + L
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSL 400
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ G G LE +Q+V++M K G D+ T+N+LI K G
Sbjct: 226 MKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGR 285
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G A+V T+ + A K G++ EA +L + G P Y
Sbjct: 286 MEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTS 345
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DDA E+ +G PN YT ++ + G+ EA N L M G
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405
Query: 181 L 181
+
Sbjct: 406 V 406
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 35/234 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P LV G AG L+ A ++++M+ QG P++ T+ +++ +CK G+
Sbjct: 331 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGK 390
Query: 61 V-----------------------------------EFCVEMYYSVCKLGSCADVSTYKI 85
V E +++ + G DVS Y
Sbjct: 391 VAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGT 450
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + K +DEA LLH + G P +Y I+ F+ G+ +A +I G
Sbjct: 451 LIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSG 510
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
PN Y LI + G EA ++ +M E+GL P + + + DG G
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIG 564
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 10 VRGRDLLVQGLLNAGYL----ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
V+ +LL L++ ++ E A ++N+M +G + D+ + +LI +CK +V+
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + G + Y ++ A+ KAG EA LLH +++ G P Y +I G
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G +A F++++ G PN YT LI + G +A + + EM + G++
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDK 585
Query: 186 RCFDLVTDG-LKNCGKHD-LAEKIEQLEVSLR 215
+ + DG +K D A K + +E L+
Sbjct: 586 VVYTSLIDGYMKQANLQDAFALKTKMIESGLQ 617
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P ++ L AG A +++K++ G P++ T+ +LI+ +CK+G
Sbjct: 471 MAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGS 530
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + +LG +V Y LI K G +++A L++ +++ G + +Y
Sbjct: 531 ISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTS 590
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ DAF +++ G + YT I+ EA L EM G
Sbjct: 591 LIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE-QLEVSLRS 216
+TP ++ + + G + A ++ ++E L S
Sbjct: 651 ITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESVLSS 687
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG V L+ GL ++ AK +++KM G P+ + ++++ + K+G+
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G +V TY LI + KAG I EA + + E G +P Y
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A +E+ KG ++ VYT+LI + +A +M E G
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615
Query: 181 LTPISRCFDLVTDGLKN 197
L C+ G N
Sbjct: 616 LQLDLYCYTCFISGFCN 632
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V V G ++ A ++ +M +G P+ T+ SL++ CK+G
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G +V TY +++ + K G + EA +L + G LY
Sbjct: 356 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTT 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F + A +++K KG + +Y TLI + + EA + L +M G
Sbjct: 416 LIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCG 475
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P + + + D L GK A
Sbjct: 476 LRPNTVIYTTIMDALFKAGKESEA 499
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V + L+ G +E A +M +QG ++ TF++ ++ CK G
Sbjct: 261 MRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGL 320
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + G + TY L+ KAG +D+A LL +V G P Y
Sbjct: 321 VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 380
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
++ G + G+ +A S ++ G N +YTTLI
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI 417
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KGF+ +G + ++ L G L+ A ++V +M QG PD+ T+N++I +C + +
Sbjct: 412 MSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQ 471
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ + G A+ TY LI A+ +G E RL + +V G Y
Sbjct: 472 MDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNG 531
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + G D + E+ KG PN Y LI + G+ +A EM G
Sbjct: 532 LIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591
Query: 181 LTPISRCFDLVTDGLKNCG-KHDLAEKIEQL 210
LTP ++ + +GL G H +E+L
Sbjct: 592 LTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ GL G SA +M+++M ++G P++ T+++L+ + C++G
Sbjct: 342 MGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 401
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M + G + Y +I A+ K G +DEA RL+ + G P Y
Sbjct: 402 WDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNT 461
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II Q D+A F + +G N Y TLI GR+ E EM G
Sbjct: 462 IIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG 521
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS----------------- 58
+V GL G++ A ++V++M+ G P + T+ L+ +C++
Sbjct: 256 VVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVN 315
Query: 59 --------------GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
G++ E+Y + G DV TY IL+ + K G A R+L
Sbjct: 316 VVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLD 375
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ E G P Y+ ++ R G +DDA ++ KG N Y +I G+ G
Sbjct: 376 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDG 435
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ EA + EM G P ++ + L N + D AE I
Sbjct: 436 KLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHI 478
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +++G L G L A ++ M +G PD+ T+N L+ +CK G V M + +
Sbjct: 320 NTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEE 379
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ TY L+ + + GM D+A +L + G + Y II + G+ D+
Sbjct: 380 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDE 439
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+K +G P+ Y T+I + EA + + E G+ ++ +
Sbjct: 440 AMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIH 499
Query: 194 GLKNCGK 200
L + G+
Sbjct: 500 ALLHSGR 506
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ G + A+ M+++M +G + + +N +I + K G+
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D+ TY +I + +DEA + NL+E+G Y
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT 496
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G++ + +E+ + G P + Y LI + G + L EM G
Sbjct: 497 LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++++ + L GK
Sbjct: 557 IKPNNFSYNMLINELCKAGK 576
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ LL++G + ++ N+M+ G D+ ++N LI+ +CK G V+ + + +
Sbjct: 495 NTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMT 554
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + +Y +LI + KAG + +A L ++ G P Y +I G + G
Sbjct: 555 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 614
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A ++ + P+ Y LI+ + +A+ L + G+ P R + ++
Sbjct: 615 ALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMV 673
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ L AG + A ++ +M+ QG PD+ T+N+LI +CK G
Sbjct: 552 MMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 611
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + D+ TY ILI K ++D+A LL V G P +
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGM 671
Query: 121 IIKGAFRR 128
+++ R+
Sbjct: 672 MVQNFVRQ 679
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 4/184 (2%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
+ L G A ++ M + G PD + ++I + G V + + +G
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
ADV+T+ ++ + G + EA RL+ ++ G P Y +++G R Q D+A+
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ N + T+I C G+ A M G P ++++ GL
Sbjct: 307 MLGRVP----EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362
Query: 197 NCGK 200
G+
Sbjct: 363 KLGR 366
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + +M+ G P+ TF +LI+ CK+G
Sbjct: 197 MRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++Y + G DV TY LI + K G + +A LL + G P Y
Sbjct: 257 LDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + VYT LI + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + ++ + C K D+ + E L
Sbjct: 377 LKPDDETYTMIMNEF--CKKGDVKKASELLR 405
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK GE+ ++ ++ K G
Sbjct: 107 VLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ K G +DE FRL + + G P Y+ +I G + + D+A
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ G PN +TTLI + GR A + +M G +P ++ + GL
Sbjct: 227 GLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CKKGDLKQ 294
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +DEA L ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ +G P+ Y TLI + G +A L EM+ GL P + + D
Sbjct: 260 AMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIEQLE 211
G +C + DL E E
Sbjct: 320 G--SCKEGDLETAFELRE 335
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G L+ A + +M+ QG PD+ T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D TY LI K G ++ AF L ++++ +Y
Sbjct: 292 LKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT ++ + G +A+ L EM G
Sbjct: 352 LIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNG 411
Query: 181 LTP 183
P
Sbjct: 412 RVP 414
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G++ A + K +T +++E + K + Y + + G
Sbjct: 72 LITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G + A + + + G P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + R EA EM + GL P F + DG
Sbjct: 192 RLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA I
Sbjct: 252 CKNGRLDLAMDI 263
>gi|341606817|gb|AEK83511.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P + ++ G + G+ ++A +F G N
Sbjct: 61 KSGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D GK D A
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEA 173
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGX 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV T +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEAMTLFKRMEE 182
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 17 FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGXVEDAIRLLHRMI 76
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ + ++ + GR EA +Y GL S + + DGL G+ D
Sbjct: 77 DEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRID 136
Query: 203 LAEKI 207
AE++
Sbjct: 137 EAERL 141
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T + ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGR 99
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 100 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 159
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A +K G +DEA L + E+G + Y +I G F+
Sbjct: 160 LIDAXTKHGKVDEAMTLFKRMEEEEGCDQXVYTYTILISGMFK 202
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P ++L+ GL LE ++++M +G P + T+ +LI C +G
Sbjct: 117 MEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGR 176
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V+ +++ + G + TY LI + G ++ A +L + G+ P++ Y
Sbjct: 177 VDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTY 236
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G ++G F+ F E+ I G PN YT LI + G F+EAA L EM
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+G ++ + DGL G+ D A +++ L V
Sbjct: 297 IGCELDVVIYNSLIDGLCKMGELDFAREMQILMV 330
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G A ++N+M+ G + D+ +NSLI+ +CK GE++F EM + + G
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + AG++DEA L+ + G P Y +I G + + D A
Sbjct: 334 VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHAL 393
Query: 136 CFFSEIKIKGHPPNRPVYTTL 156
+E+K G P +Y L
Sbjct: 394 QLVNEMKSNGLMPAGDIYKIL 414
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL G E + +++MI G P+ T+ +LI +C+ G +
Sbjct: 231 PNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVL 290
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ +G DV Y LI + K G +D A + +VE G P Y +I+G
Sbjct: 291 LNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCD 350
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G D+A E++ KG PN YTTLI + R A + EM GL P
Sbjct: 351 AGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDI 410
Query: 188 FDLVTDGL 195
+ ++ L
Sbjct: 411 YKILFKSL 418
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
D D+ +++ I +CK G++ +E++ + + GS D TY ILI + K ++
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MC 160
L+ + G +P Y +I G G+ D A E++ +G PN YT LI +C
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
G E ++ + EM L C ++VT
Sbjct: 208 DCG----EVERAILVLKEMKLRGNECCPNVVT 235
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
DV +Y I + K G I EA + + E G P Y +I G + Q +
Sbjct: 89 TDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL 148
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
E++ +G P YTTLI GR A + L EM G+TP + + + GL +
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208
Query: 198 CGKHDLA 204
CG+ + A
Sbjct: 209 CGEVERA 215
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G L+ A++M M+++G PD+ T+ SLI+ +C +G ++ + + + G
Sbjct: 309 LIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKG 368
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ TY LI ++A D A +L++ + +G P +Y + K +
Sbjct: 369 IVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V L+QGL +AG L+ A ++ +M +G P+ T+ +LI ++
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADR 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
+ +++ + G YKIL ++
Sbjct: 389 TDHALQLVNEMKSNGLMPAGDIYKILFKSL 418
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 199 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 259 VDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTT 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 319 LIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 378
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P R + ++ + C K D+ +
Sbjct: 379 LKPNXRTYTMIINEF--CKKGDVWK 401
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 164 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 223
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 224 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNT 283
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 284 LIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 343
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 344 IXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 380
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + +++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 109 VLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 168
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 169 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 228
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A M L P ++ + GL
Sbjct: 229 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 288
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 289 --CKKGDLKQ 296
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 237 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQ 296
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 297 AHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALIS 356
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G PN YT +I + G + + L EM G P
Sbjct: 357 GLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 416
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 417 SVVTYNVLMNG 427
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 192
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 193 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 252
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + + + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 253 HCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 312
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 313 KITYTTLIDGC--CKEGDLDTAFEH 335
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 269 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGD 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 329 LDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTM 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 389 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 425
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 304 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGR 363
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G + TY ++I K G + + +LL + DGH P Y
Sbjct: 364 SVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 423
Query: 121 IIKG 124
++ G
Sbjct: 424 LMNG 427
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%)
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+T ++E + K + Y + + G A + + IL+ K G I A +
Sbjct: 103 FDTCRKVLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 162
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ + G P Y ++ G R G D+ F S + G P+ Y+ LI +
Sbjct: 163 AITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES 222
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ +A EM GL P F + DG G+ DLA +I + +S
Sbjct: 223 KMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLS 271
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ GL G A +M ++M+ +G P+++ + L+ ++C +G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V++ S+ G D TY + + K G ++EAF+ L L + G Y+
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ +FD+ F ++ + + P+ +YT +I C GR +A ++L M + G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + C++ V L + G + A +
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V+ +L+ L NAG ++ A Q++ M +G PD T+N+ + +CK G
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G + Y LI + +A DE F ++E +P LY
Sbjct: 293 VNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTI 352
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+ +DA F +K KG P+ Y T++ + G A EM +
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L S ++ GL G D A +I
Sbjct: 413 LVLDSTTQTIMICGLCKRGLVDEAMQI 439
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL--------------E 46
M + G +P V + L+ G G LE A+ + +KM + G++P L E
Sbjct: 443 MGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSE 501
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ L+ +C+SG+V ++ S+ G DV TY LI + KA +D A RL L
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G +P Y +I G R + +DA F I G P+ +Y +++ R +
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKL 621
Query: 167 VEAANYLME 175
+A N ++
Sbjct: 622 SQAINLWLD 630
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P V ++++G AG +E A ++ M K+G PD +N++++ +C G+
Sbjct: 338 MLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGD 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + D +T I+I + K G++DEA ++ + E G +P Y
Sbjct: 398 LERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNA 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP--------------NRPVYTTLITMCGRGGRF 166
+I G +R G+ ++A F ++++ +P + + + MC + G+
Sbjct: 458 LIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMC-QSGQV 516
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++A L + + G+ P ++ + +GL
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV--- 71
+++ GL G ++ A Q+ ++M + G DP + T+N+LI+ + G +E +++ +
Sbjct: 422 IMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMG 481
Query: 72 --------CKLGS--CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
LG+ D + + L+ + ++G + +A++LL ++++ G P Y +
Sbjct: 482 NNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTL 541
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + D A F E+++KG P+ Y TLI R R +A + + G
Sbjct: 542 INGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS 601
Query: 182 TP 183
+P
Sbjct: 602 SP 603
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
F +L+ +G V+ + + + S Y ++ A+ +G+I A L +
Sbjct: 138 SAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNR 197
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+V G P + Y ++ G ++G DA F E+ +G PN +YT L++ G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EA L M + G P ++ GL G+
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
A S + L+ A S AG +A + + E P +Y I+K G A
Sbjct: 135 ASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
++ + G PNR Y L+ + G +A EM + G+ P + + ++ L N
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254
Query: 198 CGKHDLAEKI 207
GK D A ++
Sbjct: 255 AGKIDEAVQL 264
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + LV GL E A+++ +M QG P++ FN+++ +C G+
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + S+ ++G +V +Y LI AG DEA +LL +V G P Y
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + G+ D+A+C F E+ KG P Y+T++ RF EA + M + G
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSG 684
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
++++ +GL D A KI Q
Sbjct: 685 QQWDIYTYNIILNGLCKTNCVDEAFKIFQ 713
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DK P ++ + L+ G L+ G + + + +M +G DPD+ T++ L++ +CK+G+
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++Y + + G +V+ Y IL+ + G I + LL +V +G +P ++
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ D+A FS + G P+ Y LI + GR +A +M G
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+TP S F+ + GL + + AE++
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEEL 536
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V + ++ GL A ++ A ++ MI + PD++T+N LI +GE
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE 354
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + G DV TY +L+ + K G EA ++ + ++ G P ++Y
Sbjct: 355 WKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGI 414
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G RG D + G PN ++ ++ + EA + M++ G
Sbjct: 415 LLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG 474
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L+P + ++ D L G+ D A
Sbjct: 475 LSPDVVTYGILIDALCKLGRVDDA 498
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG V ++ GL A ++ A+ ++ MI +G PD+ T+N++I+ +CK+
Sbjct: 225 MIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + G DV TY +I + KA +D A +L ++++ P Y
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G++ + E+ +G P+ Y+ L+ + G+ EA M G
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404
Query: 181 LTPISRCFDLVTDG 194
+ P + ++ G
Sbjct: 405 IKPNVTIYGILLHG 418
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + D L++G G +++A + +M+++G P T++++++ + +
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y ++ K G D+ TY I++ + K +DEAF++ +L P +
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I F+ G+ DA F+ I G PN Y ++ + G E N + M + G
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA----EKIEQLEVSLRS 216
TP S + + L G+ A KI+++ SL +
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEA 829
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ GL A ++ A+ ++ MI +G D+ T++++I+ +CK+ V+ +
Sbjct: 197 PNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGV 256
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G DV TY +I + KA +D A +L ++++ G P Y II G +
Sbjct: 257 LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 316
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
D A + K P+ Y LI G + E L EM GL P
Sbjct: 317 AQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVT 376
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ L+ D L GK A KI
Sbjct: 377 YSLLLDYLCKNGKCTEARKI 396
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G + +++ M+ G P+ FN ++ K
Sbjct: 400 MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAM 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G DV TY ILI A+ K G +D+A + ++ DG P ++
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNS 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +++ A F E+ +G PN + T++ G+ + A + M +G
Sbjct: 520 LVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVG 579
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P ++ + G G+ D A ++ + VS+
Sbjct: 580 VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV 613
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 4/198 (2%)
Query: 16 LVQGLLNAGYLESAKQ-MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+ GL +A ++ A ++ +M + G P++ + N+L++ +C VE +E+ +++ +
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190
Query: 75 G--SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
G +C +V TY +I + KA +D A +L ++++ G Y+ II G +
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
D A + KG P+ Y T+I + A L M + G+ P ++ +
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310
Query: 192 TDGLKNCGKHDLAEKIEQ 209
DGL D A+ + Q
Sbjct: 311 IDGLCKAQAVDRADGVLQ 328
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 82/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++++ ++ A + ++M + G PD+ T+ LI+ +CK G
Sbjct: 435 MVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGR 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G + + L+ + ++A L + + G P +
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ GQ A ++ G PN Y TLI GR EAA L M +G
Sbjct: 555 IMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVG 614
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P +D + G G+ D A
Sbjct: 615 LKPDLISYDTLLRGYCKTGRIDNA 638
Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 77/225 (34%), Gaps = 42/225 (18%)
Query: 27 ESAKQMVNKMIKQGSD---PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
E A + N+M + S+ PDL T++ L C+ G +E + + K G +
Sbjct: 69 ELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVI 128
Query: 84 KILIPAVSKAGMIDE------------------------------------AFRLLHNLV 107
L+ + A +DE A LLH +
Sbjct: 129 NQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMA 188
Query: 108 EDGH---NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
EDG P Y II G + D A + KG + Y+T+I +
Sbjct: 189 EDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQ 248
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
A L M + G+ P ++ + DGL D AE + Q
Sbjct: 249 AVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQ 293
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +GF+P L+ GLL AG +E A+ + N+M++ G + +N L+ +G
Sbjct: 851 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 910
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + G D+ +Y I+I + KAG +++ L+E G P Y
Sbjct: 911 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 970
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A F+E++ KG PN Y +LI G+ G+ EA E+ G
Sbjct: 971 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1030
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + G G D A
Sbjct: 1031 WKPNVFTYNALIRGYSVSGSTDSA 1054
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL +G L AK++ +++ G PD T+ +I+ K+ +
Sbjct: 431 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASK 490
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V+++Y + + DV LI + KAG DEA+R+ + L E P Y
Sbjct: 491 FDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNT 550
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + E+ +PPN Y T++ + G +A + L MT G
Sbjct: 551 LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 610
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 611 CIPDLSSYNTVIYGL 625
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L+Q L +AG + AK + KM K PD T+ +L++ +G+
Sbjct: 256 MENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ ++ G +V Y +I A+ + G + EA + + + G P Y
Sbjct: 316 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F DA F + I G PN + I G+ G ++A M G
Sbjct: 376 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 435
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V GL G+ +A+++
Sbjct: 436 IVPDVVAGNAVLFGLAKSGRLGMAKRV 462
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ + ++ GL+ + LE A + ++ QG P T+ L++ + K+G
Sbjct: 816 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 875
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G A+ + Y IL+ AG ++ L ++V+ G NP Y
Sbjct: 876 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 935
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + GQ +D +F ++ G P+ Y LI G+ R EA + EM + G
Sbjct: 936 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 995
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + L GK A K+
Sbjct: 996 IVPNLYTYNSLILHLGKAGKAAEAGKM 1022
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G NP ++ +++ L AG L ++++ G +PDL T+N LI+ + KS
Sbjct: 921 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 980
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V ++ + K G ++ TY LI + KAG EA ++ L+ G P Y
Sbjct: 981 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1040
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G G D A+ + + + G PN Y L
Sbjct: 1041 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 93/185 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL++ ++ A+ + +M + G PD T+N L++ + KS +E +++ + + G
Sbjct: 761 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 820
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ +++A L +NL+ G +P P Y P++ G + G+ +DA
Sbjct: 821 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 880
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G N +Y L+ G + + +M + G+ P + + ++ D L
Sbjct: 881 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 940
Query: 196 KNCGK 200
G+
Sbjct: 941 CKAGQ 945
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A Q M +G PD+ N+++ + KSG + +++ + +G D TY ++I
Sbjct: 424 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 483
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
SKA DEA ++ ++++E+ P +I ++ G+ D+A+ F ++K P
Sbjct: 484 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 543
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL-KNCGKHD 202
Y TL+ GR G+ E + L EM P ++ + D L KN +D
Sbjct: 544 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVND 598
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ L A + A +++ KM +G PD+ T LI+ +C +G
Sbjct: 221 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 280
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + K D TY L+ G + + + DG+N Y
Sbjct: 281 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 340
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A F E+K KG P + Y +LI+ + RF +A M G
Sbjct: 341 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 400
Query: 181 LTP 183
P
Sbjct: 401 PKP 403
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ G L A A ++ M G P+ T I KSGE
Sbjct: 361 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G DV ++ ++K+G + A R+ H L G +P Y
Sbjct: 421 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + +FD+A F ++ P+ +LI + GR EA ++ EM
Sbjct: 481 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 540
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ + GL GK
Sbjct: 541 LEPTDGTYNTLLAGLGREGK 560
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+N V ++ L G + A +M ++M ++G P+ ++NSLI K+
Sbjct: 326 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR 385
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ + G + T+ + I K+G +A + + G P
Sbjct: 386 FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 445
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ A F E+K G P+ YT +I C + +F EA +M E
Sbjct: 446 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 505
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + D L G+ D A +I
Sbjct: 506 CVPDVLAVNSLIDTLYKAGRGDEAWRI 532
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 76/175 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++++ A + A ++ MI+ PD+ NSLI+T+ K+G +
Sbjct: 470 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 529
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + ++ TY L+ + + G + E LL + + P Y I+
Sbjct: 530 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 589
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ G +DA + KG P+ Y T+I + R+ EA + +M ++
Sbjct: 590 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 644
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV L+ +G+ A ++ M+ G P + T++ L+ K +VE + + + G
Sbjct: 166 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 225
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y I I + +A DEA+R+L + +G P + +I+ G+ DA
Sbjct: 226 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 285
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P+R Y TL+ G G M G + V D L
Sbjct: 286 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 345
Query: 196 KNCGK 200
G+
Sbjct: 346 CQVGR 350
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
GL G L SA + M + G + T+N L+ + KSG +E+Y + G
Sbjct: 134 GLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP 193
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
V TY +L+ A K ++ LL + G P Y I+ + +FD+A+
Sbjct: 194 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 253
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++++ +G P+ +T LI + GR +A + +M + P
Sbjct: 254 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 298
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 2/203 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G+L +E + + + G D LI+ +CK + E+ G
Sbjct: 691 LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 750
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
Y LI + +ID A L + E G P Y ++ + + ++
Sbjct: 751 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 810
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG+ Y T+I+ + R +A + + G +P + + DGL
Sbjct: 811 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 870
Query: 196 KNCGKHDLAEKI--EQLEVSLRS 216
G+ + AE + E LE ++
Sbjct: 871 LKAGRIEDAENLFNEMLEYGCKA 893
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 1/181 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ + G ++ A ++ Q GS D + +SL+E I K +E +E +
Sbjct: 655 ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 714
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D LI + K EA L+ G + LY +I G D A
Sbjct: 715 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 774
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F+E+K G P+ Y L+ G+ R E EM G ++ + G
Sbjct: 775 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 834
Query: 195 L 195
L
Sbjct: 835 L 835
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + L G + A ++ ++ +G D T+N LI +CK+G
Sbjct: 441 MLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGN 500
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D TY LI A + G++ EA ++ +N++ DG P +
Sbjct: 501 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 560
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II RRG A+ +F ++ +G PN Y LI R GR A+++ EM E G
Sbjct: 561 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 620
Query: 181 LTPISRCFDLVTDGLKNC 198
L + L+ DG NC
Sbjct: 621 LVANKYTYTLLIDG--NC 636
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G + ++L+ GL G L+ AK++ KM+ G PD T+ LI C+ G +
Sbjct: 479 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 538
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ ++ G T+ ++I A + G + A+ ++E+G P Y +I
Sbjct: 539 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 598
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
R G+ A F E+ +G N+ YT LI + G + +A + EM + G+ P
Sbjct: 599 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 658
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 6/216 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + ++ GLL +G +E+A+ +M G PD+ T+NSL+ CK+G
Sbjct: 301 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G V TY I I + G ++EA L + E G P Y
Sbjct: 361 LKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI---TMCGRGGRFVEAANYLMEMT 177
++KG+ A FF E+ KG P+ Y T I + G R +E LM
Sbjct: 421 LMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLM--- 477
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
G++ + ++++ GL G A++++ VS
Sbjct: 478 LEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 513
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL G ++ + +M +G P + T+N++I + +SG VE + + +G
Sbjct: 281 LITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMG 340
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY L+ KAG + EA L +L G P Y I G R G ++A
Sbjct: 341 LLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEAR 400
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ +G PN YT L+ A + EM GL P CF T
Sbjct: 401 ILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQP--DCFAYNTRIC 458
Query: 196 KNCGKHDLAEKIEQLEV 212
D+A +E EV
Sbjct: 459 AELILGDIARALELREV 475
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G L A+++ N MI G P TF +I C+ G
Sbjct: 511 MVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGN 570
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + TY +LI A+ + G A H ++E G Y
Sbjct: 571 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTL 630
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G + G ++DA F+ E+ G P+ + L+
Sbjct: 631 LIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALV 667
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 5/207 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M G P + + L+ L G + ++ +M +GS P+ T+N +I + +
Sbjct: 195 MLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 254
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G++E E+ + +L A TY LI + G + + + L + +G P Y
Sbjct: 255 GDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTY 313
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G + A F+E++ G P+ Y +L+ + G EA ++
Sbjct: 314 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 373
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAE 205
GL P +++ DG C DL E
Sbjct: 374 AGLAPTVLTYNIRIDGY--CRLGDLEE 398
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +++ G L SA KM+++G +P+ T+N LI +C+ G
Sbjct: 546 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 605
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G A+ TY +LI K G ++A R + ++G +P +
Sbjct: 606 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 665
Query: 121 IIKG 124
++KG
Sbjct: 666 LVKG 669
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V+ + +++ L +A + + +M++ G +P + T+N+L+++ K G
Sbjct: 160 MASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGR 219
Query: 61 VEFCVEMYYSVCKLGS--CADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSL 117
+ + + GS + TY ++I +++ G ++EA L+ + + + F
Sbjct: 220 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT-- 277
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY-LMEM 176
Y P+I G RG + E++ +G P Y +I + G VEAA EM
Sbjct: 278 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSG-LVEAAQVKFAEM 336
Query: 177 TEMGLTPISRCFDLVTDGLKNCG 199
MGL P ++ + +G G
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAG 359
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 3/173 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M G PD++ N ++ + + + ++ + +LG + TY L+ + K G
Sbjct: 159 EMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEG 218
Query: 95 MIDEAFRLLHNLVEDGHNPFPS--LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
D+ LL + G P+ Y +I G R+G ++A +++ +
Sbjct: 219 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF-T 277
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
Y LIT G + + +EM G+ P ++ + GL G + A+
Sbjct: 278 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQ 330
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ L G ++ A ++VN M+ +G D T+N LI+ +CK+G VE + ++ + +
Sbjct: 526 NTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIR 585
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + T ILI AG + A + +++ G +P Y +I G +RG+ +
Sbjct: 586 KGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQE 645
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F +++ +G P+ Y TLI R G F +A L E G P ++++
Sbjct: 646 ALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL-- 703
Query: 194 GLKNCGKHDLAE 205
+ N GK +E
Sbjct: 704 -VYNFGKQSNSE 714
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+ G + L+ L G + A M +M +G PD+ TFNSLI +C+ E
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y + G A+ T+ LI A + G I EA +L+++++ G Y
Sbjct: 503 MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + G + F E+ KG P+ LI G+ A ++ +M G
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+P ++ + +GL C + + E + E
Sbjct: 623 FSPDIVTYNSLINGL--CKRGRIQEALNLFE 651
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 1/206 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +L+ G G LE A ++ +M+ +G + +N+LI +CK G+
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++M+ + G D+ T+ LI + + +++A L ++V +G +
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG+ +A +++ +G P + Y LI + G + EM G
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAE 205
LTP +++ +G GK H+ E
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALE 613
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P V LV GL G SA ++VN M +G P+L T+ LI+ CK G+
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G + Y LI A+ K G I EA + + G P +
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + +DA + ++ ++G N + TLI R G EA + +M G
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P + + L+ GL +E A + M+ +G + TFN+LI + GE
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G D TY LI A+ K G +++ L ++ G P
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +A F ++ +G P+ Y +LI + GR EA N ++ G
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S ++ + L G D A
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDA 681
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMV-NKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V + LV G + G L A V +KMI G PD+ TF++L+ +CK G +E
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + G +++TY ILI K G ++EA +L ++ G + Y +I
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ +A F E+ KG P+ + +LI R +A +M G+ S
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523
Query: 187 CFDLVTDGLKNCGKHDLAEKI 207
F+ + G+ A K+
Sbjct: 524 TFNTLIHAFLRRGEIQEALKL 544
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ G AG + +A + + MI +G PD+ T+NSLI +CK G
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGR 642
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
++ + ++ + G D TY LI + + G D+A LL+ VE+G P
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVP 695
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 7/209 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P L+++ L +++A ++ M K G P+ + +LI+ + K
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + +G DV+T+ +I + + E +L+ ++ G P Y
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEM 179
++ G + + D+A S K+ G PN + TL+ R GR EA ++ + M
Sbjct: 321 LMHGLCKTCRIDEAQALLS--KVPG--PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINN 376
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
G P F + +GL C K +E
Sbjct: 377 GYVPDVFTFSTLVNGL--CKKGLFGSALE 403
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 72/166 (43%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
+P ++N +++ + ++Y + G + T+ +++ A+ +D A
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
LL ++ + G P +Y +I +R + D+A E+ + G PP+ + T+I
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R R +E A + M G TP + + GL + D A+ +
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL 337
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R ++++ L+ A + M+ +G P+ TF +++ +C EV+ +
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G + Y+ LI A+SK +DEA +LL + G P + + +I G R
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR 292
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+ + + +KG PN Y L+ + R EA L
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+P + + L+ GL G ++ A + K+ +G PD T+N+LI +C+ G
Sbjct: 618 MIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGA 677
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSK 92
+ + Y + G + T+ IL+ K
Sbjct: 678 FDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ GL G A +M ++M+ +G P+++ + L+ ++C +G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V++ S+ G D TY + + K G ++EAF+ L L + G Y+
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ +FD+ F ++ + + P+ +YT +I C GR +A ++L M + G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + C++ V L + G + A +
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V+ +L+ L NAG ++ A Q++ M +G PD T+N+ + +CK G
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G + Y LI + +A DE F ++E +P LY
Sbjct: 293 VNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTI 352
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+ +DA F +K KG P+ Y T++ + G A EM +
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412
Query: 181 LTPISRCFDLVTDGLKNCG--KHDLAEKIEQL 210
L D T + CG K L ++ Q+
Sbjct: 413 LV-----LDSTTQTIMICGLCKRGLVDEAMQI 439
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL--------------E 46
M + G +P V + L+ G G LE A+ + +KM + G++P L E
Sbjct: 443 MGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSE 501
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ L+ +C+SG+V ++ S+ G DV TY LI + KA +D A RL L
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G +P Y +I G R + +DA F I G P+ +Y +++ R +
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKL 621
Query: 167 VEAANYLME 175
+A N ++
Sbjct: 622 SQAINLWLD 630
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P V ++++G AG +E A ++ M K+G PD +N++++ +C G+
Sbjct: 338 MLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGD 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + D +T I+I + K G++DEA ++ + E G +P Y
Sbjct: 398 LERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNA 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP--------------NRPVYTTLITMCGRGGRF 166
+I G +R G+ ++A F ++++ +P + + + MC + G+
Sbjct: 458 LIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMC-QSGQV 516
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++A L + + G+ P ++ + +GL
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV--- 71
+++ GL G ++ A Q+ ++M + G DP + T+N+LI+ + G +E +++ +
Sbjct: 422 IMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMG 481
Query: 72 --------CKLGS--CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
LG+ D + + L+ + ++G + +A++LL ++++ G P Y +
Sbjct: 482 NNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTL 541
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + D A F E+++KG P+ Y TLI R R +A + + G
Sbjct: 542 INGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS 601
Query: 182 TP 183
+P
Sbjct: 602 SP 603
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
F +L+ +G V+ + + + S Y ++ A+ +G+I A L +
Sbjct: 138 SAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNR 197
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+V G P + Y ++ G ++G DA F E+ +G PN +YT L++ G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EA L M + G P ++ GL G+
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
A S + L+ A S AG +A + + E P +Y I+K G A
Sbjct: 135 ASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
++ + G PNR Y L+ + G +A EM + G+ P + + ++ L N
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254
Query: 198 CGKHDLAEKI 207
GK D A ++
Sbjct: 255 AGKIDEAVQL 264
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 95/208 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + V +L V L G A +V +M ++G PD T+N LI CK G+
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGK 304
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++M+ + G A V TY LI A+S GM+ E RL ++ V G P +Y
Sbjct: 305 EKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNA 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D AF E++ K P+ Y TL+ GR EA + EMT+ G
Sbjct: 365 LINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRG 424
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P ++ + G G A K+
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDAVKVR 452
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V L+ L G ++ ++ N +++G PDL +N+LI + C G+
Sbjct: 315 MVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGD 374
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + K D TY L+ + G +DEA L+ + + G P Y
Sbjct: 375 MDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G DA E+ KG P Y +I G+ +A + + EM G
Sbjct: 435 LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNG 494
Query: 181 LTPISRCFDLVTDGL 195
+TP + + +GL
Sbjct: 495 ITPDDSTYISLIEGL 509
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P ++L+ G G + A +M M+ +G + T+ SLI + G
Sbjct: 280 MGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGM 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G D+ Y LI + G +D AF ++ + + P Y
Sbjct: 340 VQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNT 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G G+ D+A E+ +G P+ Y TLI+ G +A EM G
Sbjct: 400 LMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKG 459
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL G+ AE +
Sbjct: 460 FNPTLLTYNAMIKGLCLNGQGGDAEDL 486
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKA 93
++++Q P+ T+N++I C G V+ +E+ + + G A D TY +I K
Sbjct: 137 ELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKV 196
Query: 94 GMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G +++A ++ ++ +G P +Y +I G +G + A + E+ +G
Sbjct: 197 GKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVAT 256
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
Y + GR EA + EM E GL P + ++++ +G GK A K+ ++ V
Sbjct: 257 YNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 1/169 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ G G +E A ++ ++M+ +G +P+ +N+LI C G +E + +
Sbjct: 189 VISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDR 248
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V+TY + + + G EA L+ + E G P Y +I G + G+ A
Sbjct: 249 GVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKA 308
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F + KG YT+LI G E + G+ P
Sbjct: 309 MKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP 357
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + L+ G G ++ A ++ ++M+ +G +P L T+N++I+ +C +G+
Sbjct: 420 MTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQ 479
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
++ + G D STY LI ++
Sbjct: 480 GGDAEDLVKEMVGNGITPDDSTYISLIEGLT 510
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGFNP + + +++GL G A+ +V +M+ G PD T+ SLIE + E
Sbjct: 455 MMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514
>gi|341606819|gb|AEK83512.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M ++G F+ +I +CK G++ ++ ++ + GS +V+ Y +LI +
Sbjct: 1 LYQEMDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K+G +++A RLLH ++++G P + ++ G + G+ ++A +F G N
Sbjct: 61 KSGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y++LI G+ GR EA EM+E G T S C++ + D GK D A
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEA 173
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G L + MI++GS P++ + LI+ KSG
Sbjct: 5 MDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGX 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV T +++ + K G ++EA +G Y+
Sbjct: 65 VEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D+A F E+ KG + Y LI + G+ EA M E
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEAMTLFKRMEE 182
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ ++I + K G ++E + + N++ G P ++Y +I G + G +DA +
Sbjct: 17 FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGXVEDAIRLLHRMI 76
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ + ++ + GR EA +Y GL S + + DGL G+ D
Sbjct: 77 DEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRID 136
Query: 203 LAEKI 207
AE++
Sbjct: 137 EAERL 141
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 36/163 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T + ++ +CK+G
Sbjct: 40 MIRKGSKPNVAIYTVLIDGYAKSGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGR 99
Query: 61 VEFCVE--------------MYYS---------------------VCKLGSCADVSTYKI 85
VE ++ M+YS + + G D Y
Sbjct: 100 VEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 159
Query: 86 LIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIKGAFR 127
LI A +K G +DEA L + E+G + Y +I G F+
Sbjct: 160 LIDAXTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P ++LV G AG + +A+++ KMI G PD+ TF SLI+ C+ G+V
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQG 366
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G + TY ILI A+ K + +A LL L P P +Y P+I G
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ ++A E++ K P++ +T LI GR EA + +M +G +P
Sbjct: 427 FCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 37/235 (15%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++GL G E A +++ M G PD+ T+N+LI+ CKS E++ EM+ V
Sbjct: 210 NILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKS 269
Query: 74 LGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------------------- 113
C+ DV TY +I KAG + EA LL +++ G P
Sbjct: 270 SSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMH 329
Query: 114 --------------FPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
FP + + +I G R GQ + F + E+ +G PN Y+ LI
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLE 211
+ R ++A L ++ + P ++ V DG GK + A I E++E
Sbjct: 390 NALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEME 444
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 3/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P R LV G L A ++ + + NSL+ T+ K
Sbjct: 129 MKSDGISPNSRLLGFLVSSFAEKGKLHCATALL--LQSYEVEGCCMVVNSLLNTLVKLDR 186
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++++ + SC D T+ ILI + G ++A LL + G P Y
Sbjct: 187 VEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNT 246
Query: 121 IIKGAFRRGQFDDAFCFFSEIK-IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+IKG + + A F ++K G P+ YT++I+ + G+ EA+ L +M +
Sbjct: 247 LIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRL 306
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
G+ P + F+++ DG G+ AE+I +S
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISF 341
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G AG + A +V +M K+ PD TF LI C G + V +++ + +G
Sbjct: 423 VIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRL 102
D T L+ + KAGM EA+ L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P +L+ L L A++++ ++ + P +N +I+ CK+G+
Sbjct: 373 MNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + K D T+ ILI G + EA + H +V G +P +
Sbjct: 433 VNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH 146
++ + G +A+ ++I KG
Sbjct: 493 LLSCLLKAGMAKEAY-HLNQIAHKGQ 517
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF P +++GL A E + + +M++ P+ TF+ L+ C+ G
Sbjct: 233 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGM 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E+ + + G A+ + I+I ++ K G +D+AF L+N+ G +P Y
Sbjct: 293 VERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTT 352
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R G+++DA +E+ K PPN + T I + + G +A + +M E G
Sbjct: 353 VLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYG 412
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ ++ + +G G+ D A
Sbjct: 413 CSVGIVTYNALVNGFCVQGRVDSA 436
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G++E A ++V +M++ G P+L TFN+L++ I + E +E+ + +
Sbjct: 488 NVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVS 547
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY ++ +S+ I+EA ++ H + + G P +Y I+ +R + D
Sbjct: 548 KGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDR 607
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
A FF+ + PN Y LI R G EA L E+ G+
Sbjct: 608 AIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 88/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++++ G+ ++ A+Q++N++ G PD ++ ++++ +C +
Sbjct: 198 MRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKR 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + + + T+ +L+ + GM++ A +L + E G +L
Sbjct: 258 WEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNI 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ DDAF F + + G P+ YTT++ R GR+ +A L EM
Sbjct: 318 VINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKN 377
Query: 181 LTP 183
P
Sbjct: 378 CPP 380
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +++GL AG E AK+++N+M+++ P+ TFN+ I +C+ G
Sbjct: 338 MGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGL 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G + TY L+ G +D A L ++L P Y
Sbjct: 398 IDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTT 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + D A +E+ P N + L++ + G EA + +M E G
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
TP F+ + DG+ ++C + E + L
Sbjct: 515 CTPNLITFNTLLDGITEDCNSEEALELLHGL 545
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++GL + G + A +++ M+++ P + T+ L+E +CKS +++ + G
Sbjct: 143 LIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG 202
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY ++I + + +D+A ++L+ L G P Y ++KG +++D
Sbjct: 203 CTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 262
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ PN + L+ RGG A L M+E G T + ++V + +
Sbjct: 263 VLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSI 322
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 323 CKQGRVDDA 331
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 9/185 (4%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A ++V + +G PD+ LI +C+ G + + G+ DV Y
Sbjct: 51 LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---LYAPIIKGAFRRGQFDDAFCFFSEIK 142
L+ + G +D A RL+ ++ P P Y P+I+G RG+ DA ++
Sbjct: 111 LVAGYCRYGRLDAARRLIASM------PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDML 164
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+ P+ YT L+ + F +A L EM G TP ++++ +G+ + D
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVD 224
Query: 203 LAEKI 207
A +I
Sbjct: 225 DARQI 229
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL +A L++A +++ +M++ ++ TFN L+ C+ G VE +E+ + + G
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ T+ L+ +++ +EA LLH LV G + Y+ I+ R + ++A
Sbjct: 515 CTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAV 574
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ G P +Y +++ + A ++ M P + ++ +GL
Sbjct: 575 QMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGL 634
Query: 196 KNCG 199
G
Sbjct: 635 AREG 638
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G ++++ + G ++ A + +N M G PD ++ ++++ +C++G
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + + T+ I + + G+ID+A L+ + E G + Y
Sbjct: 363 WEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNA 422
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G +G+ D A F+ + + PN YTTL+T R AA L EM +
Sbjct: 423 LVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQ 477
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV G G L++A++++ M PD T+ LI +C G V + + + +
Sbjct: 109 NTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
V TY +L+ AV K+ +A ++L + G P Y II G R + DD
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A + + G P+ YTT++ R+ + EM E P FD++
Sbjct: 226 ARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G+ E A ++++ ++ +G D T++S+++ + +
Sbjct: 510 MMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDR 569
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V+M+++V +G Y ++ A+ K D A ++V + P S Y
Sbjct: 570 IEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVI 629
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G R G +A SE+ +G
Sbjct: 630 LIEGLAREGLLKEARYVLSELCSRG 654
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V ++LV L G ++ AK ++ M+K PD+ T+++L++ E
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ ++ +G DV TY ILI K M+DEA L + + P Y+
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + E+ +G P N Y++LI + G A +M + G
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + F ++ DGL G+ A+++ Q
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQ 468
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V +L+ G ++ A + +M ++ P + T++SLI+ +CKSG
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G A+V TY LI + K G +D A L + + + G P +
Sbjct: 390 IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA F ++ KG+ N Y +I + G EA L +M + G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509
Query: 181 LTPISRCFDLVTDGL 195
P + F+++ L
Sbjct: 510 CIPDAVTFEIIIIAL 524
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++L+ + G + ++ K++K+G PD T N+LI+ +C G+V+
Sbjct: 88 KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G + +Y LI V K G A +LL + P +Y+ II
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIID 207
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +A+ FSE+ +KG + Y+TLI G+ EA L EM + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++++ D L C + + E L V L++
Sbjct: 268 NVYTYNILVDAL--CKEGKVKEAKSVLAVMLKA 298
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++L+ + G + ++ K++K+G PD TF +LI +C G+V
Sbjct: 955 KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G + +Y LI V K G A +LL + P +Y II
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ A+ F E+ +KG + Y TLI G+ EA L +M + P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQL 210
R ++++ D L GK L E + L
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSML 1161
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G ++ A+ + N M G PD+ T+ LI CK+ V+ + +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + + TY LI + K+G I + L+ + + G Y+ +I G +
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCK 421
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G D A F+++K +G PN +T L+ +GGR +A ++ G
Sbjct: 422 NGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
++++ DG +C + L E + L
Sbjct: 482 YNVMIDG--HCKQGLLEEALTML 502
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 87/191 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P + L++GL G ++ A +K++ QG + ++ +LI +CK G+
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRA 182
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + +V Y +I A+ K ++ EA+ L + G + Y+ +I
Sbjct: 183 AIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A +E+ +K PN Y L+ + G+ EA + L M + + P
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 184 ISRCFDLVTDG 194
+ + DG
Sbjct: 303 DVITYSTLMDG 313
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G V L+ GL G+L+ A + NKM QG P+ TF L++ +CK G
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G +V TY ++I K G+++EA +L + ++G P +
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEI 519
Query: 121 IIKGAFRRGQ------FDDAFCFFSEIKIKGHPPN 149
II F++ + FD E K KG P+
Sbjct: 520 IIIALFKKDENGGNVGFDKKVWEIVEHK-KGETPS 553
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 3/211 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ + ++ + +A + +++ +G PDL T N LI C G++ F +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G D T LI + G + +A L+ G Y +I G +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G A +I + PN +Y+T+I + EA EMT G++
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
+ + G C + L E I L E+ L+++
Sbjct: 237 YSTLIYGF--CIEGKLKEAIGLLNEMVLKTI 265
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ L + A + ++M +G D+ T+++LI C G+++ + +
Sbjct: 197 PNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ +V TY IL+ A+ K G + EA +L +++ P Y+ ++ G F
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A F+ + + G P+ YT LI + EA N EM + + P
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 188 FDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 377 YSSLIDGLCKSGR 389
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG + V + L+ G G L+ A ++NKM+ + +P++ T+N L++ +CK G+
Sbjct: 1092 MNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK 1151
Query: 61 --VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
++ + M + G A+ T++I+I A+ + D+ +LLH ++ G
Sbjct: 1152 DLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A N+M+ P + FN ++++ K V + + + G D+ T I
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI G I F +L +++ G+ P +IKG +GQ A F ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
N+ Y TLI + G A L ++ P + + D L
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDAL 209
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG G + L+ L ++ A M M +G PD+ TFNSLI +CK +
Sbjct: 75 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 134
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +Y + G A+ TY LI A + G + EA +L+++++ G Y
Sbjct: 135 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 194
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK R G + F ++ KG PN LI R G A +L +M G
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254
Query: 181 LTPISRCFDLVTDGLKNCGK 200
LTP ++ + +GL G+
Sbjct: 255 LTPDIVTYNSLINGLCKTGR 274
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G ++ A ++VN M+ +G D T+N LI+ +C++G +E + ++ + G
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ + ILI + + G I A L +++ G P Y +I G + G+ +A
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F +++++G P+ Y TLI+ + G F +A L + G P
Sbjct: 280 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 327
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG NP ++L+ GL G ++ A + + MI +G PD+ T+NSLI +CK+G
Sbjct: 215 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 274
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G C D TY LI K GM D+A LL V+ G P +
Sbjct: 275 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 334
Query: 121 IIKGAFRRG 129
++ + G
Sbjct: 335 LVSNFIKEG 343
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ GL GYL SA++++N+M +G +P++ T+ LI+ CK G
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G + Y LI A+ K + +A + ++ G P +
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + +F++A + ++ ++G N Y TLI R G EA + +M
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G LE A+ ++++M +G + +N LI +CK +
Sbjct: 40 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 99
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + M+ + G D+ T+ LI + K +EA L +++ +G Y
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG +A +++ +G P + Y LI R G + +M G
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + +++ +GL G
Sbjct: 220 LNPNNISCNILINGLCRTGN 239
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L AG +E + M+ +G +P+ + N LI +C++G ++ +E + G
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY LI + K G EA L L +G P Y +I + G FDDA
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 314
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT 158
S G PN + L++
Sbjct: 315 LLLSRGVDSGFIPNEVTWYILVS 337
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
M M+ G PD+ T+N+LI +CK G + E+ + G +V TY ILI
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K G ++EA +L + G Y +I + + DA F ++ KG P+
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 152 VYTTLITMCGRGGRFVEAANYLMEM 176
+ +LI + +F EA +M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDM 145
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + ++ G+ +G + A++M N+M+ +G +PD T+ +LI+ CK+GE
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE 432
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G +V TY L + K G ID A LLH + G P Y
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G + E+ + G P+ YTTL+ + G +A L M
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F+++ +G G + E++
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERL 579
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + ++L+ G +G LE ++++ M+++G P+ TFNSL++ C
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNN 607
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y ++ G D +TY ILI KA + EA+ L +VE G++ + Y
Sbjct: 608 MRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDA 667
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+I+G ++R +F +A F E++ G + +Y + + G +
Sbjct: 668 LIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNW 713
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+G P V ++V G G L+ ++V+++ +G PD +N++I +CK+GE
Sbjct: 268 MTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGE 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + K G D Y +I K G + A +L + P Y
Sbjct: 328 VVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS 387
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F+E+ +KG P+ YT LI + G EA + +M + G
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG 447
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + DGL G+ D+A ++
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANEL 474
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 2/199 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G G + +A ++ ++M ++ PD+ T+ S+I ICKSG++ EM+ + G
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI KAG + EAF + + +V+ G P Y + G + G+ D A
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG PN Y T++ + G + + EM G P + + + D
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532
Query: 196 KNCGKHDLAEKIEQLEVSL 214
C ++A+ E L + L
Sbjct: 533 --CKMGEMAKAHELLRIML 549
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L GL G ++ A +++++M ++G P++ T+N+++ +CK G
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V++ + G D TY L+ A K G + +A LL ++ P +
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G +D + KG PN + +L+ M + G
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P S ++++ G +C ++ E
Sbjct: 623 VMPDSNTYNILIKG--HCKARNMKE 645
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETI-CKSGEV 61
D G +P V DL Q L+ G++ A+++ +K+++ G +++ N + + C +
Sbjct: 166 DWGSHPLVF--DLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGI 223
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ V+++ +LG C + + I++ + + G + EA LL + + G+ P Y +
Sbjct: 224 KIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVV 283
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G R G+ D E+K KG P+ +Y +I + + G VEA L M + G+
Sbjct: 284 VSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGV 343
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + V G G A K+
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKL 369
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G AG ++ A + N+M+++G P++ T+ +L + +CK+GE
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + + + G +V TY ++ + K G I++ +L+ + G P Y
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ A + K P + L+ G + + M E G
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 181 LTPISRCFD 189
+ P + F+
Sbjct: 588 IMPNATTFN 596
>gi|293332843|ref|NP_001167893.1| uncharacterized protein LOC100381604 [Zea mays]
gi|223944699|gb|ACN26433.1| unknown [Zea mays]
gi|414864420|tpg|DAA42977.1| TPA: hypothetical protein ZEAMMB73_690405 [Zea mays]
Length = 430
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
VR ++LV AG A+++ ++M + GSDPD T+N L+ + K G + +
Sbjct: 208 VRYYNVLVAAKCKAGDFVGAREVFDEMRRSGSDPDANTWNYLLGCLLKKGRLAEACGLVE 267
Query: 70 SVCKLGSCADVS--TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ +L S TY+IL KAG +D A ++L + + P ++++ IKG F
Sbjct: 268 AMERLKRSEIPSSLTYEILTYHACKAGKMDSAMQILDQMFSENLTPRITIHSAFIKGYFY 327
Query: 128 RGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G+ +DA + S++ + H NR Y+ L + + GR ++A L E+ E GL P
Sbjct: 328 AGRIEDACKYVSDMSTRDRHSVNRN-YSLLAKLLWKSGRTIDAGRVLYELMEKGLRPDHS 386
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQL 210
+ V L GK +LA +++ +
Sbjct: 387 AYVKVAKDLHKMGKGNLACELKMM 410
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 87/185 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P V ++ V GL G LE A +++ KMI+ G PD T+ S + ++G
Sbjct: 508 MLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGH 567
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++Y + G V TY +LI A + G +D A + E G P Y
Sbjct: 568 LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNV 627
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A FF E++ KG PN+ YT LI G++ EA +M
Sbjct: 628 LINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKR 687
Query: 181 LTPIS 185
+ P S
Sbjct: 688 IRPDS 692
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P V +LV G G + AK+ ++M+ G PD + + I K G+
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGD 497
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G DV TY + + + K G ++EA LL ++ DGH P Y
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + F ++ +G P YT LI GR A Y +EM E G
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ P ++++ +G K D A K
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACK 643
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + G L G A ++ +M+ +G PD+ T+N + +CK G
Sbjct: 473 MLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGN 532
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + + G D TY + A + G + E + ++++ G P Y
Sbjct: 533 LEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTV 592
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ D A +F E++ KG PN Y LI + + +A + +EM E G
Sbjct: 593 LIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKG 652
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ + N GK A ++
Sbjct: 653 IFPNKYTYTILINENCNMGKWQEALRL 679
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V + ++ G G + A+Q ++ M+K+ PD+ ++N+LI C+ G
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + ++ TY LI + + G ++ A +L +++ G +P Y
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTV 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ GA + G A FF E+ G P++ YT I + G +A EM G
Sbjct: 453 LVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKG 512
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P +++ +GL C +L E E L+ +R
Sbjct: 513 FPPDVITYNVFVNGL--CKLGNLEEAGELLQKMIR 545
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M F P V+ + +++ L + L A ++ M + G P + T+N+++ + CK GE
Sbjct: 193 MMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGE 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + G T+ +LI +SK G + +A L+ + + G P Y P
Sbjct: 253 VQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNP 312
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A + E+ +G P + T++ + G+ +A L +M +
Sbjct: 313 LICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN 372
Query: 181 LTP 183
L P
Sbjct: 373 LMP 375
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + ++ G ++ A +V KM ++G P TFN LI + K GE
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K G TY LI K G++ EA L +V G +P + +
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G+ DA S++ K P+ Y TLI R G EA L E+
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L+ ++ + DGL G + A K+++
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKE 436
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL G LE+A ++ MI +G PD+ T+ L+ CK G + E + +
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+G D Y I K G +AF+L ++ G P Y + G + G ++
Sbjct: 476 VGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEE 535
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ GH P+ YT+ + G E +M G TP + ++
Sbjct: 536 AGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIH 595
Query: 194 GLKNCGKHDLA 204
G+ D A
Sbjct: 596 AHALNGRLDWA 606
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P ++L+ GL G L+ AK ++ +M K G T+N LI CK G
Sbjct: 263 MQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGL 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G V+++ ++ K G + +A + L ++++ P Y
Sbjct: 323 LVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNT 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G +AF E++ + N Y TLI R G A +M G
Sbjct: 383 LIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG 442
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
+ P + ++ +G G +A++ E L V L
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGL 478
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 6/202 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D+L+ G LN L + KM++ PD++ N +++ + + +E+Y + +
Sbjct: 175 DVLIGGYLNYQCL----LVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGE 230
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V+TY ++ + K G + A L+ + E G P + +I G ++G+
Sbjct: 231 YGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQ 290
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+ G + Y LI + G VEA EM G++P + +
Sbjct: 291 AKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMY 350
Query: 194 GLKNCGKHDLAEKIEQLEVSLR 215
G C + +++ +QL L+
Sbjct: 351 GF--CKEGKMSDARQQLSDMLK 370
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V +L+ G L+ A +M ++G P++ T+N LI CK +
Sbjct: 578 MLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRK 637
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G + TY ILI G EA RL ++ P +
Sbjct: 638 MDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGA 697
Query: 121 IIK 123
++K
Sbjct: 698 LLK 700
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ G G LE +++V +M G PD+ T+N+L+ CK G
Sbjct: 220 MKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGR 279
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G A+V T+ + A K GM+ EA +L + G P Y
Sbjct: 280 MERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTC 339
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DDA +E+ +G P N YT L+ + G+ EA + M G
Sbjct: 340 LVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAG 399
Query: 181 L 181
+
Sbjct: 400 I 400
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ L G L A+ ++ +M G PD+ T+NSLI+ K GE+E ++
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G DV TY L+ K G ++ A+ + +G ++ + +
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F+++++KG PN YT L+ + GR +A EM + G+
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
+ ++ DGL GK AE + +L
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRL 394
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P LV G AG L+ A + N+M++QG ++ T+ L++ +CK G+
Sbjct: 325 MRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGK 384
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + G A+ Y LI + A LL + + G SLY
Sbjct: 385 VAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGA 444
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A +++ G PN +YT ++ C + + EA L +M + G
Sbjct: 445 LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG 504
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL G D A
Sbjct: 505 FRPNIVTYCALVDGLCKAGSIDEA 528
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D GF P + LV GL AG ++ A NKM+ G +P+++ + +L++ +CK+G
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V + + G D L+ K G + +AF L ++ G Y
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTC 619
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ G +A SE+ G P+ VY LI C + G EAA EM +
Sbjct: 620 FVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESL 678
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 35/251 (13%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVN-------------------------- 34
M DKG V L+ GL N L+ AK ++N
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489
Query: 35 ---------KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
KM+ G P++ T+ +L++ +CK+G ++ + + + LG +V Y
Sbjct: 490 ESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTA 549
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + K G +D+A LL +++ G + + ++ G ++G DAF +++ G
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
+ YT + EA L EM E G+TP + ++ + + + G + A
Sbjct: 610 LQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAA 669
Query: 206 KIEQLEVSLRS 216
++ SL S
Sbjct: 670 ILQNEMESLLS 680
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
E + ++ ++ +Q P++ TFN +I+ +CK G++ + + +G DV TY L
Sbjct: 176 ERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSL 235
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
I K G ++E +L+ + G P Y ++ + G+ + A+ +F+E+K +G
Sbjct: 236 IDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGV 295
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
N ++T + + G EA +M G+ P + + DG G+ D
Sbjct: 296 MANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLD 351
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V V G + A ++ +M +G P+ T+ L++ CK+G
Sbjct: 290 MKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGR 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G +V TY +L+ + K G + EA + + G LY
Sbjct: 350 LDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTT 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F + A SE+K KG + +Y LI + EA + L +M E G
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469
Query: 181 LTPISRCFDLVTDG 194
L P + + + D
Sbjct: 470 LKPNNVIYTNIMDA 483
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 10 VRGRDLLVQGLLNAGYL----ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+R +LL L++ ++ E A ++++M +G + D+ + +LI +C +++
Sbjct: 400 IRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAK 459
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + G + Y ++ A KA EA LL +++ G P Y ++ G
Sbjct: 460 SLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGL 519
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ G D+A F+++ G PN YT L+ + GR +A L EM + G++
Sbjct: 520 CKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMS 576
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G + G V G N ++ A++++++MI+ G PD +N LI K G
Sbjct: 605 MINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGN 664
Query: 61 VEFCVEMYYSVCKLGSCAD 79
+E + + L SC +
Sbjct: 665 MEEAAILQNEMESLLSCTN 683
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT L + + GR V+A L EM +G
Sbjct: 317 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 377 LKPDARTYTMIINEF--CKKGDVWK 399
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 282 LIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CKKGDLKQ 294
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 235 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +
Sbjct: 295 AHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXS 354
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 414
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 2/196 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + ++N+L+ + G+++ + ++
Sbjct: 140 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIEQ 209
G C + DL E
Sbjct: 320 GC--CKEGDLDSAFEH 333
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y L + + G +A ++L ++ G P Y
Sbjct: 327 LDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ GH P+
Sbjct: 387 IINEFCKKGDVWKGSKLLKEMQRDGHVPS 415
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P L+ GLL AG +E A+ + N+M++ G + +N L+ +G E
Sbjct: 933 QGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEK 992
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D+ +Y I+I + KAG +++ L+E G P Y +I
Sbjct: 993 VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLID 1052
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++A F+E++ KG PN Y +LI G+ G+ EA E+ G P
Sbjct: 1053 GLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1112
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++ + G G D A
Sbjct: 1113 NVFTYNALIRGYSVSGSTDSA 1133
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L+Q L +AG + AK + KM K PD T+ +L++ +GE
Sbjct: 335 MENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGE 394
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ ++ G +V Y +I A+ + G + EA + + + G P Y
Sbjct: 395 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F DA F + I G PN + I G+ G ++A M G
Sbjct: 455 LISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 514
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V GL G+ +A+++
Sbjct: 515 IVPDVVAGNAVLFGLAKSGRLGMAKRV 541
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL +G L AK++ +++ G PD T+ +I+ K+ +
Sbjct: 510 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASK 569
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V+++Y + + DV LI + KAG DEA+++ + L E P Y
Sbjct: 570 FDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNT 629
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + E+ +PPN Y T++ + G +A + L MT G
Sbjct: 630 LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 689
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 690 CIPDLSSYNTVIYGL 704
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ + ++ GL+ + LE A + ++ QG P T+ L++ + K+G
Sbjct: 895 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G A+ + Y IL+ AG ++ L ++V+ G NP Y
Sbjct: 955 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1014
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + GQ +D +F ++ G P+ Y LI G+ R EA + EM + G
Sbjct: 1015 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1074
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + L GK A K+
Sbjct: 1075 IVPNLYTYNSLILHLGKAGKAAEAGKM 1101
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 93/185 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL++ ++ A+ + +M + G PD T+N L++ + KS +E +++ + + G
Sbjct: 840 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 899
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ +++A L +NL+ G +P P Y P++ G + G+ +DA
Sbjct: 900 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 959
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G N +Y L+ G + + +M + G+ P + + ++ D L
Sbjct: 960 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 1019
Query: 196 KNCGK 200
G+
Sbjct: 1020 CKAGQ 1024
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G NP ++ +++ L AG L ++++ G +PDL T+N LI+ + KS
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1059
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V ++ + K G ++ TY LI + KAG EA ++ L+ G P Y
Sbjct: 1060 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1119
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+I+G G D A+ + + + G PN
Sbjct: 1120 LIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1148
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A Q M +G PD+ N+++ + KSG + +++ + +G D TY ++I
Sbjct: 503 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 562
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
SKA DEA ++ ++++E+ P + +I ++ G+ D+A+ F ++K P
Sbjct: 563 CCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEP 622
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL-KNCGKHD 202
Y TL+ GR G+ E + L EM P ++ + D L KN +D
Sbjct: 623 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVND 677
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ G L A A ++ M G P+ T I KSGE
Sbjct: 440 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGE 499
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G DV ++ ++K+G + A R+ H L G +P Y
Sbjct: 500 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 559
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + +FD+A F ++ P+ V +LI + GR EA ++ EM
Sbjct: 560 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMN 619
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ + GL GK
Sbjct: 620 LEPTDGTYNTLLAGLGREGK 639
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ L A + A +++ +M +G PD+ T LI+ +C +G
Sbjct: 300 MEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGR 359
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + K D TY L+ + G + + + DG+N Y
Sbjct: 360 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTA 419
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A F E+K KG P + Y +LI+ + RF +A M G
Sbjct: 420 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHG 479
Query: 181 LTP 183
P
Sbjct: 480 PKP 482
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+N V ++ L G + A +M ++M ++G P+ ++NSLI K+
Sbjct: 405 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR 464
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ + G + T+ + I K+G +A + + G P
Sbjct: 465 FGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 524
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ A F E+K G P+ YT +I C + +F EA +M E
Sbjct: 525 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 584
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + D L G+ D A +I
Sbjct: 585 CVPDVLVVNSLIDTLYKAGRGDEAWQI 611
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 77/175 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++++ A + A ++ MI+ PD+ NSLI+T+ K+G +
Sbjct: 549 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEA 608
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++Y + ++ TY L+ + + G + E LL + + P Y I+
Sbjct: 609 WQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 668
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ G +DA + KG P+ Y T+I + R+ EA + +M ++
Sbjct: 669 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 723
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV L+ +G+ A ++ M+ G P + T++ L+ K +VE + + + G
Sbjct: 245 LVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 304
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y I I + +A DEA+R+L + +G P + +I+ G+ DA
Sbjct: 305 VKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAK 364
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P+R Y TL+ G M G + V D L
Sbjct: 365 DVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDAL 424
Query: 196 KNCGK 200
G+
Sbjct: 425 CQVGR 429
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
GL G L SA + M + G + T+N L+ + KSG +E+Y + G
Sbjct: 213 GLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVP 272
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
V TY +L+ A K ++ LL + G P Y I+ + +FD+A+
Sbjct: 273 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRIL 332
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
+E++ +G P+ +T LI + GR +A + +M + P + + D +
Sbjct: 333 AEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADN 392
Query: 199 GK 200
G+
Sbjct: 393 GE 394
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 2/203 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G+L E + + + G D LI+ +CK + E+ G
Sbjct: 770 LMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 829
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+Y LI + +ID A L + E G P Y ++ + + ++
Sbjct: 830 VSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 889
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG+ Y T+I+ + R +A + + G +P + + DGL
Sbjct: 890 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 949
Query: 196 KNCGKHDLAEKI--EQLEVSLRS 216
G+ + AE + E LE ++
Sbjct: 950 LKAGRIEDAENLFNEMLEYGCKA 972
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + L A Q+ M+ +G PD T+N +I+ +CK+G
Sbjct: 474 MLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 533
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D TY LI A + G++ EA +LL+ +V DG P Y
Sbjct: 534 LKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTI 593
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ RRG A+ +F ++ G PN Y LI GR A + EM E G
Sbjct: 594 LVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERG 653
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + L+ DG NC + + A+ I
Sbjct: 654 LAPNKYTYTLLIDG--NCREGNWADAIR 679
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++++ GL G L+ AK++ KM+ G PD T+ LI C+ G
Sbjct: 509 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGL 568
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G V TY IL+ + G + A+ +++ G P Y
Sbjct: 569 LREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 628
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ AF F E+ +G PN+ YT LI R G + +A EM + G
Sbjct: 629 LIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNG 688
Query: 181 LTP 183
+ P
Sbjct: 689 IPP 691
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G L A++++N M+ G P + T+ L+ T C+ G
Sbjct: 544 MVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGN 603
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G + TY +LI A+ G AFR H ++E G P Y
Sbjct: 604 LYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTL 663
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I G R G + DA + E+ G PP+ + L
Sbjct: 664 LIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNAL 699
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + ++ GLL E+A+ +M G PD+ T+NSL+ CK+G
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G V TY LI + G + EA RL +VE G P Y
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ + A FF E+ KG P+ Y T I A M G
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ P + ++++ DGL G A++++ VS
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVS 546
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 5/200 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLE--TFNSLIETICKSGEVEFCV 65
P + + L+ L G + A ++ +M QG L TFN +I + + G +E V
Sbjct: 235 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAV 294
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ S+ +L A TY LI A+ + G + +A L + +G P Y II G
Sbjct: 295 KLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGL 353
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ Q + A F+E++ G P+ Y +L+ + G EA L ++ GL P
Sbjct: 354 LKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTV 413
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + DG C DLAE
Sbjct: 414 LTYNTLIDGY--CRLGDLAE 431
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LL G++ A+ + +M +G P + T+N++I + K + E + + +G
Sbjct: 314 LITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMG 373
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY L+ KAG + EA LL +L G P Y +I G R G +A
Sbjct: 374 LLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEAR 433
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
E+ +G P+ YT L+ + A + EM GL P
Sbjct: 434 RLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQP 481
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +LV G L SA KM+ G +P+ T+N LI +C +G
Sbjct: 579 MVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGR 638
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + TY +LI + G +A RL + ++G P +
Sbjct: 639 TPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNA 698
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
+ KG F G A + I
Sbjct: 699 LFKG-FDEGHMYHAIEYMENI 718
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P L+ GLL AG +E A+ + N+M++ G + +N L+ +G E
Sbjct: 979 QGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEK 1038
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D+ +Y I+I + KAG +++ L+E G P Y +I
Sbjct: 1039 VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLID 1098
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++A F+E++ KG PN Y +LI G+ G+ EA E+ G P
Sbjct: 1099 GLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1158
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++ + G G D A
Sbjct: 1159 NVFTYNALIRGYSVSGSTDSA 1179
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL +G L AK++ +++ G PD T+ +I+ K+ +
Sbjct: 556 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASK 615
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V+++Y + + DV LI + KAG DEA+R+ + L E P Y
Sbjct: 616 FDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNT 675
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + E+ +PPN Y T++ + G +A + L MT G
Sbjct: 676 LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 735
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 736 CIPDLSSYNTVIYGL 750
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L+Q L +AG + AK + KM K PD T+ +L++ +G+
Sbjct: 381 MENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 440
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ ++ G +V Y +I A+ + G + EA + + + G P Y
Sbjct: 441 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 500
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F DA F + I G PN + I G+ G ++A M G
Sbjct: 501 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 560
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V GL G+ +A+++
Sbjct: 561 IVPDVVAGNAVLFGLAKSGRLGMAKRV 587
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ + ++ GL+ + LE A + ++ QG P T+ L++ + K+G
Sbjct: 941 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 1000
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G A+ + Y IL+ AG ++ L ++V+ G NP Y
Sbjct: 1001 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1060
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + GQ +D +F ++ G P+ Y LI G+ R EA + EM + G
Sbjct: 1061 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1120
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + L GK A K+
Sbjct: 1121 IVPNLYTYNSLILHLGKAGKAAEAGKM 1147
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 93/185 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL++ ++ A+ + +M + G PD T+N L++ + KS +E +++ + + G
Sbjct: 886 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 945
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ +++A L +NL+ G +P P Y P++ G + G+ +DA
Sbjct: 946 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 1005
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G N +Y L+ G + + +M + G+ P + + ++ D L
Sbjct: 1006 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 1065
Query: 196 KNCGK 200
G+
Sbjct: 1066 CKAGQ 1070
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G NP ++ +++ L AG L ++++ G +PDL T+N LI+ + KS
Sbjct: 1046 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1105
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V ++ + K G ++ TY LI + KAG EA ++ L+ G P Y
Sbjct: 1106 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1165
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+I+G G D A+ + + + G PN
Sbjct: 1166 LIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A Q M +G PD+ N+++ + KSG + +++ + +G D TY ++I
Sbjct: 549 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 608
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
SKA DEA ++ ++++E+ P +I ++ G+ D+A+ F ++K P
Sbjct: 609 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 668
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL-KNCGKHD 202
Y TL+ GR G+ E + L EM P ++ + D L KN +D
Sbjct: 669 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVND 723
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ L A + A +++ KM +G PD+ T LI+ +C +G
Sbjct: 346 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 405
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + K D TY L+ G + + + DG+N Y
Sbjct: 406 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 465
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A F E+K KG P + Y +LI+ + RF +A M G
Sbjct: 466 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 525
Query: 181 LTP 183
P
Sbjct: 526 PKP 528
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ G L A A ++ M G P+ T I KSGE
Sbjct: 486 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 545
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G DV ++ ++K+G + A R+ H L G +P Y
Sbjct: 546 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 605
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + +FD+A F ++ P+ +LI + GR EA ++ EM
Sbjct: 606 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 665
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ + GL GK
Sbjct: 666 LEPTDGTYNTLLAGLGREGK 685
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+N V ++ L G + A +M ++M ++G P+ ++NSLI K+
Sbjct: 451 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ + G + T+ + I K+G +A + + G P
Sbjct: 511 FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 570
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ A F E+K G P+ YT +I C + +F EA +M E
Sbjct: 571 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 630
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + D L G+ D A +I
Sbjct: 631 CVPDVLAVNSLIDTLYKAGRGDEAWRI 657
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 76/175 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++++ A + A ++ MI+ PD+ NSLI+T+ K+G +
Sbjct: 595 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 654
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + ++ TY L+ + + G + E LL + + P Y I+
Sbjct: 655 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 714
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ G +DA + KG P+ Y T+I + R+ EA + +M ++
Sbjct: 715 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 769
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV L+ +G+ A ++ M+ G P + T++ L+ K +VE + + + G
Sbjct: 291 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 350
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y I I + +A DEA+R+L + +G P + +I+ G+ DA
Sbjct: 351 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 410
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P+R Y TL+ G G M G + V D L
Sbjct: 411 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 470
Query: 196 KNCGK 200
G+
Sbjct: 471 CQVGR 475
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
GL G L SA + M + G + T+N L+ + KSG +E+Y + G
Sbjct: 259 GLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP 318
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
V TY +L+ A K ++ LL + G P Y I+ + +FD+A+
Sbjct: 319 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 378
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++++ +G P+ +T LI + GR +A + +M + P
Sbjct: 379 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 423
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 2/203 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G+L +E + + + G D LI+ +CK + E+ G
Sbjct: 816 LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 875
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
Y LI + +ID A L + E G P Y ++ + + ++
Sbjct: 876 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 935
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG+ Y T+I+ + R +A + + G +P + + DGL
Sbjct: 936 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 995
Query: 196 KNCGKHDLAEKI--EQLEVSLRS 216
G+ + AE + E LE ++
Sbjct: 996 LKAGRIEDAENLFNEMLEYGCKA 1018
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 1/181 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ + G ++ A ++ Q GS D + +SL+E I K +E +E +
Sbjct: 780 ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 839
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D LI + K EA L+ G + LY +I G D A
Sbjct: 840 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 899
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F+E+K G P+ Y L+ G+ R E EM G ++ + G
Sbjct: 900 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 959
Query: 195 L 195
L
Sbjct: 960 L 960
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L++ G +E+A+Q VNKM +G P +ET+N LI + E
Sbjct: 788 MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ C ++ + G+ +V +Y LI + K + EA + ++ + G +P +Y
Sbjct: 848 FDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNM 907
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G+ +DAF F E+ KG N Y TLI G+ EA + L+E++ G
Sbjct: 908 LIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG 967
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P ++ + G + G
Sbjct: 968 LKPDVFTYNSLISGYRFAG 986
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + + L++GL AG +E A+ ++ +M QG PD TF+ L + + +
Sbjct: 648 MKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDK 707
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + G + T IL+ A+ K G I++A +L + G P LY
Sbjct: 708 ADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNT 767
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G A ++ +G P+ Y LI G A + +M G
Sbjct: 768 MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKG 827
Query: 181 LTPISRCFDLVTDG 194
++P ++++ G
Sbjct: 828 VSPSVETYNILIGG 841
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 8/198 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V L+ L L A+ + M +G P++ +N LI+ C G+
Sbjct: 858 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK 917
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + K G ++ TY LI +S G + EA +L + G P Y
Sbjct: 918 IEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNS 977
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G + E+K G P Y LI++C + G +E + EM
Sbjct: 978 LISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG--IELTKKI--FGEMS 1033
Query: 181 LTPISRCFDLVTDGLKNC 198
L P LV +G+ +C
Sbjct: 1034 LQPDL----LVYNGVLHC 1047
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+GF P +L G + ++A + + G + T + L+ +CK G+
Sbjct: 683 MKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQ 742
Query: 61 VEFCVEMY---------------------YS--------------VCKLGSCADVSTYKI 85
+E E+ YS + K G D Y
Sbjct: 743 IEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNC 802
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + G ++ A + ++ + G +P Y +I G R+ +FD F E++ G
Sbjct: 803 LIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
PN Y TLI +G + +EA +M + G++P R ++++ DG + GK
Sbjct: 863 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK 917
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +P V ++L+ GL ++ A+Q+ ++M+ + P L T+N+LI+ CK G
Sbjct: 578 MKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGN 637
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + + T+ L+ + KAGM+++A +L + + G P ++
Sbjct: 638 PEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSI 697
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + D A + G N + L+ + G+ +A L G
Sbjct: 698 LFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKG 757
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P ++ + DG G
Sbjct: 758 LVPNEVLYNTMIDGYSRKG 776
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + L+ G G E + ++ +M +P L TFN+L++ + K+G VE +
Sbjct: 620 PSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENV 679
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D T+ IL S D A + V+ G + ++ +
Sbjct: 680 LTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK 739
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
GQ + A KG PN +Y T+I R G V A + M + G+ P
Sbjct: 740 EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799
Query: 188 FDLVTDGLKNCGKHDLAEK 206
++ + G + AE+
Sbjct: 800 YNCLIRTFCELGDMENAEQ 818
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 60/126 (47%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
++ N+M P + +N LI+ +CK +++ +++ + + TY LI
Sbjct: 573 ELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGY 632
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
K G +++F++ + D P + ++KG F+ G +DA +E+K +G P+
Sbjct: 633 CKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDA 692
Query: 151 PVYTTL 156
++ L
Sbjct: 693 FTFSIL 698
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 4/177 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ LL+ G +E K++ +M Q PDL +N ++ G+
Sbjct: 998 MKTSGIKPTLKTYHLLISLCTKEG-IELTKKIFGEMSLQ---PDLLVYNGVLHCYAVHGD 1053
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + D +TY LI K G + E L+ + P Y
Sbjct: 1054 MDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDI 1113
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
I+KG + A+ ++ E++ KG + + L++ R EA N + EM
Sbjct: 1114 IVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMN 1170
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 82/226 (36%), Gaps = 36/226 (15%)
Query: 15 LLVQGLLN-AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
LL+ LLN + + A + + +G P ++ L++ + K+ + + ++ ++ +
Sbjct: 486 LLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 545
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
Y I A K + + L + + D +P +Y +I G + Q D
Sbjct: 546 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKD 605
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG----------------------------- 163
A F E+ + P+ Y TLI C G
Sbjct: 606 AEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLK 665
Query: 164 -----GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G +A N L EM + G P + F ++ DG + K D A
Sbjct: 666 GLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAA 711
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G G + A + M + PD+ T+N+L++ CK GE
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++Y + ++ ILI G++ EAFRL + E G P
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG R G A F + + +G PP+ Y TLI + F A + M E G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + G G+ AE +
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMV 666
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + + +++G L AG L A +N MI +G PD T+N+LI + K
Sbjct: 565 MKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 624
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G ++ TY ++ S+ G + EA +LH +++ G NP S Y
Sbjct: 625 FDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 684
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+I G + +AF E+ +G P+
Sbjct: 685 LINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ + P V + L+ G G +E AK++ MI + P +F+ LI C G
Sbjct: 495 MTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGL 554
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + + G + T +I +AG + +A L+ ++ +G P Y
Sbjct: 555 VSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNT 614
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + FD AF + ++ +G PN Y ++ R GR EA L +M + G
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674
Query: 181 LTPISRCFDLVTDG 194
+ P + + +G
Sbjct: 675 INPDKSTYTSLING 688
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +GF + + L+ ++ G+++ A ++ +K G+ ++ T N ++ +CK G+
Sbjct: 180 LRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGK 239
Query: 61 VEFCVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ V +Y S + + G AD+ TY L+ A + G++ EAF L+ + G P Y
Sbjct: 240 LD-NVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYN 298
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G ++ A E+ G PN + ++ R EA EM +
Sbjct: 299 ALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQR 358
Query: 180 GLTP 183
G+ P
Sbjct: 359 GVVP 362
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLL++ + A L + + K+G + N+L+ I K G V+ ++Y K
Sbjct: 158 DLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVK 217
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G+ +V T I++ A+ K G +D L + E G Y ++ RRG +
Sbjct: 218 SGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSE 277
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF + KG P Y LI + G + A L EM +GL P + F+ +
Sbjct: 278 AFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML- 336
Query: 194 GLKNCGKHDLAE 205
+++C K D+ E
Sbjct: 337 -VESCRKEDVWE 347
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +L+ G + G + A ++ ++M ++G P L T N++I+ ++G + +
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 596
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ G D TY LI + K D AF L++N+ E G P Y I+ G R
Sbjct: 597 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSR 656
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ +A ++ KG P++ YT+LI EA EM + G P
Sbjct: 657 HGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A+++ N+M+++G PDL +F+S++ ++GE+ + + + +G D Y ILI
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 407
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ + A ++ + +VE G Y ++ G R DDA F E+ +G P
Sbjct: 408 GYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP 467
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ TTLI + G +A + MT L P ++ + DG G+ + A+++
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG + + LV G + A +V+ M +G P L T+N+LI +CK G
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + +G C + +T+ ++ + + EA R+ + +++ G P ++
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ R G+ A +F ++K G P+ +YT LI R A EM E G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429
Query: 181 LTPISRCFDLVTDGL 195
++ + +GL
Sbjct: 430 CVMDVVTYNTLLNGL 444
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 88/181 (48%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++V L G L++ +++M ++G DL T+N+L+ C+ G V + +
Sbjct: 228 NIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAG 287
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + TY LI + K G + A R+L ++ G P + + P++ + R+ +
Sbjct: 288 KGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWE 347
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F+E+ +G P+ +++++ + R G A Y +M +GL P + + ++ +
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 407
Query: 194 G 194
G
Sbjct: 408 G 408
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P + + L+ GL G E AK+++++M+ G P+ TFN ++ C+ +
Sbjct: 285 MAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKED 344
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + + G D+ ++ ++ S+ G + A + G P +Y
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R A +E+ +G + Y TL+ RG +A EM E G
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464
Query: 181 LTP 183
+ P
Sbjct: 465 VFP 467
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 4/201 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + +V G L A KM G PD + LI C++ +
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY-- 118
V ++M + + G DV TY L+ + + M+D+A L +VE G FP Y
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG--VFPDFYTL 472
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G A F + ++ P+ Y TL+ + G +A +M
Sbjct: 473 TTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532
Query: 179 MGLTPISRCFDLVTDGLKNCG 199
+ P F ++ +G + G
Sbjct: 533 REIFPSYISFSILINGFCSLG 553
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ LI T ++ ++ E + + K G C ++ L+ A+ K G +D A+++ +
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
V+ G+ ++ + G+ D+ + SE++ KG + Y TL+ R G
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
EA + M GL P ++ + +GL G ++ A+++ E L V L
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGL 325
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G+ P V ++L+ L G ++ A+ + +++ K G P +FN+LI CKSG +E
Sbjct: 225 DSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLE 284
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + DV TY LI + K +++A L + + G P + +I
Sbjct: 285 EGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLI 344
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ D A + ++ KG + +Y TLI +GG F EA ++ EMT+ GL
Sbjct: 345 NGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLI 404
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIE 208
P + + DG +C + DL +E
Sbjct: 405 PDKFTYTTLLDG--SCKEGDLELALE 428
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + + L+ GL GY A++ V +M K+G PD T+ +L++ CK G+
Sbjct: 363 MFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGD 422
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +EM + K G D + +I + + G I +A R L ++ G P Y
Sbjct: 423 LELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTM 482
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G F E++ GH P Y L+ + G+ A L M +G
Sbjct: 483 VMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLG 542
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++ G GK
Sbjct: 543 VVPDDITYNILLQGHCKHGK 562
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL LE A + +M +G P+ TF +LI CK+G V+ +E+
Sbjct: 300 PDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEI 359
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
Y + G AD+ Y LI + K G EA + + + + G P Y ++ G+ +
Sbjct: 360 YQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCK 419
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G + A E+ +G + +T +I+ R G+ V+A L EM GL P
Sbjct: 420 EGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGT 479
Query: 188 FDLVTDGLKNCGKHDL 203
+ +V DG C K D+
Sbjct: 480 YTMVMDGF--CKKGDV 493
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G +G LE ++ M + PD+ T+++LI+ +CK ++E
Sbjct: 262 GLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDA 321
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ +C G + T+ LI K G +D A + + G LY +I G
Sbjct: 322 NHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDG 381
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G F +A F E+ +G P++ YTTL+ + G A EM + G+
Sbjct: 382 LCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLD 441
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ F + GL GK AE+ E L L+
Sbjct: 442 NVAFTAIISGLCRDGKIVDAERTLREMLRAGLK 474
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
P G L++ ++ A + +++ G P++ TFN L+ +CK G+V+ ++
Sbjct: 196 PFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIF 255
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAF 126
+ K G ++ LI K+G ++E FRL +V + FP + Y+ +I G
Sbjct: 256 DEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRL--KMVMEEFRVFPDVFTYSALIDGLC 313
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ Q +DA F E+ +G PN +TTLI + GR A +M GL
Sbjct: 314 KECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLV 373
Query: 187 CFDLVTDGLKNCGKHDLAEK 206
++ + DGL G A K
Sbjct: 374 LYNTLIDGLCKGGYFREARK 393
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ G + + AK+++++M ++ PD T+++L++ +C+ G
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGR 426
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ +C G D+ Y IL+ K G +DEA +LL + E P LY
Sbjct: 427 PREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTI 486
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F G+ + A FS++ G P+ Y +I + G EA + +M + G
Sbjct: 487 LIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG 546
Query: 181 LTPISRCFDLVTDGL 195
P S ++++ G
Sbjct: 547 FLPDSCSYNVIIQGF 561
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V + ++ G + G L A ++ +M+ + PD TFN L++ +CK G
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + G+ + TY L+ +DEA ++L ++ G P S Y
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A SE+ K P+ Y+TL+ + GR EA N EM G
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ DG G D A K+
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKL 468
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ GL N G ++ A + N+M+ G +P++ ++N++I +CK+G
Sbjct: 161 GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMA 220
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V ++ + + +V TY +I ++ K +++EA L +V+ G P Y I+ G
Sbjct: 221 VRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHG 280
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ ++A F E+ + P+ + L+ + G EA MTE G P
Sbjct: 281 FCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN 340
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ ++ + DG C + + E I+ L +
Sbjct: 341 AYTYNALMDGY--CLHNQMDEAIKVLGI 366
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ L + A + +++M+ +G PD+ T+N+++ C G++ +
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + D T+ IL+ + K GM+ EA + + E G P Y ++ G
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCL 353
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
Q D+A + KG PN Y LI + R EA L EM+E LTP +
Sbjct: 354 HNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413
Query: 188 FDLVTDGLKNCGK 200
+ + GL G+
Sbjct: 414 YSTLMQGLCQVGR 426
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P ++LV GL G + A+ + M ++G++P+ T+N+L++ C +
Sbjct: 297 MVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ 356
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G ++S+Y ILI K+ ++EA RLL + E P Y+
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + G+ +A F E+ G P+ Y+ L+ + G EA L EM E
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ G+ GK ++A+++
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKEL 503
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G V ++L+ L +++ A ++ KM K G PD TFN+LI +C G+++
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEA 185
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V ++ + G +V +Y +I + K G A R+ + ++ P Y II
Sbjct: 186 VGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDS 245
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ ++A F SE+ +G PP+ Y T++ G+ EA EM + P
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305
Query: 185 SRCFDLVTDGL 195
+ F+++ DGL
Sbjct: 306 TVTFNILVDGL 316
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
SA + N+M G ++ + N LI +C+ V+F V + + KLG D T+ LI
Sbjct: 114 SAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLI 173
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+ G I EA L + +V GH P Y +I G + G A F +++
Sbjct: 174 NGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGK 233
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
PN Y T+I + EA +L EM + G+ P ++ + G + G+ + A ++
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ G G+L+ A +++ +M ++ P++ + LI + +G+
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G D+ TY ++I + K G+ DEA+ + +DG P Y
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNV 556
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
II+G + A E+ K + + L+ +
Sbjct: 557 IIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M++ P + F + +I K + V + + G +V + +LI + +
Sbjct: 86 RMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLS 145
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D A ++ + + G P + +I G G+ +A F+E+ GH PN Y
Sbjct: 146 HVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYN 205
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
T+I + G + A +M + P ++ + D L C + E +E L
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSL--CKDRLVNEAVEFL 259
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 48/101 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G P + +++++GLL G + A + KM G PD ++N +I+ ++ +
Sbjct: 507 LSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQD 566
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
+++ + AD ST+++L+ S +I R
Sbjct: 567 SSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDEIISRFMR 607
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL G L+ A ++ N+M+ G P+ TF +LI CK+ +
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + G D+ TY LI + K G + + L+ ++ +G P Y
Sbjct: 257 VDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + A +++ + + YT LI+ R GR +A L EM +G
Sbjct: 317 LIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
L P + + ++ + C K D
Sbjct: 377 LKPDNGTYTMIINEF--CKKRD 396
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+Q G + A+ + + + K G P + +FN+LI K G+++ + ++
Sbjct: 140 NILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G+ DV TY ILI + K G +DEA L + ++++G P + +I G + + D
Sbjct: 200 SGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ +G P+ Y TLI + G + + + EM GL P + + D
Sbjct: 260 AMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G +C + DL +E
Sbjct: 320 G--SCKEGDLEIALE 332
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L++ CK GE+ ++ ++ K G
Sbjct: 107 VLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ LI K G +DE FRL + G P Y+ +I G + G+ D+A
Sbjct: 167 LRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G PN +TTLI + + A +M GL+P ++ + GL
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGL 286
Query: 196 KNCGK----HDLAEKI 207
G+ HDL +++
Sbjct: 287 CKKGELKQVHDLIDEM 302
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + + L+ GL G L+ ++++MI G PD ++ +LI+ CK G+
Sbjct: 267 MLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
II ++ A E++ G P
Sbjct: 387 IINEFCKKRDSKTASKLLREMQRDGPVP 414
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G++ A Q + +T ++E + + + + Y V + G
Sbjct: 72 LMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G + A + + + G P + +I G + G D+ F
Sbjct: 132 YPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + G+ EA EM + GL P F + G
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251
Query: 196 KNCGKHDLAEKI 207
K DLA +I
Sbjct: 252 CKNEKVDLAMEI 263
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ L G L A+ + +M G PD+ T+NSLI+ K GE+E +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G ADV TY LI SK G I++A+ + G + + +
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F++++++G PN YT+L+ + GR +A L EM GL P
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
+ ++ DGL GK +A+ + L
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSL 399
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ G G LE + +V++M K G D+ T+N+LI K G
Sbjct: 225 MKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGW 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + +LG A+V T + A K G++ EA +L + G P Y
Sbjct: 285 IEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTS 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DDA E+ +G PN YT ++ + G+ A + L M G
Sbjct: 345 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAG 404
Query: 181 L 181
+
Sbjct: 405 V 405
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 35/234 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P LV G AG L+ A ++++M+ QG P++ T+ +++ +CK G+
Sbjct: 330 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGK 389
Query: 61 V-----------------------------------EFCVEMYYSVCKLGSCADVSTYKI 85
V E +++ + G DVS Y
Sbjct: 390 VAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGT 449
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + K +DEA LLH + + G P +Y I+ F+ G+ +A +I G
Sbjct: 450 LIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSG 509
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
PN Y LI + G EA ++ +M E+GL P + + + DG G
Sbjct: 510 LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIG 563
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 10 VRGRDLLVQGLLNAGYL----ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
V+ +LL L++ ++ E A ++N+M +G + D+ + +LI +CK +++
Sbjct: 405 VKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAK 464
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + G + Y ++ A KAG EA LLH + + G P Y +I G
Sbjct: 465 SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGL 524
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G +A F +++ G PN VYTTLI + G +A + + EM + G++
Sbjct: 525 CKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDK 584
Query: 186 RCFDLVTDG 194
+ + DG
Sbjct: 585 VVYTSLIDG 593
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++ AG A +++K+ G P++ T+ +LI+ +CK+G
Sbjct: 470 MDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGS 529
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + +LG +V Y LI K G + +A L++ +V+ G + +Y
Sbjct: 530 IYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTS 589
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G AF +++ G + YT I+ EA L EM G
Sbjct: 590 LIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 649
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE-QLEVSLRS 216
+TP ++ + + G + A ++ ++E L S
Sbjct: 650 ITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESVLSS 686
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG V L+ GL L+ AK +++KM G P+ + ++++ K+G+
Sbjct: 435 MKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGK 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G +V TY LI + KAG I EA + E G +P +Y
Sbjct: 495 ESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTT 554
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A +E+ KG ++ VYT+LI + G A +M E G
Sbjct: 555 LIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETG 614
Query: 181 LTPISRCFDLVTDGLKN 197
L C+ G N
Sbjct: 615 LQLDLYCYTCFISGFCN 631
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
V G + A ++ +M +G P+ T+ SL++ CK+G ++ + + + G
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
+V TY +++ + K G + A +L + G LY +I G F + A
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALD 430
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+E+K KG + +Y TLI + + EA + L +M + GL P + + + D
Sbjct: 431 LLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFF 490
Query: 197 NCGK 200
GK
Sbjct: 491 KAGK 494
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GL G L+ A+++VN+M G PD TF +LI+ CK G+
Sbjct: 379 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGD 438
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + + G D + LI + + G + +A R+L +++ G P Y
Sbjct: 439 MESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTM 498
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G F E++ GH P Y L+ + G+ A L M +G
Sbjct: 499 VIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVG 558
Query: 181 LTPISRCFDLVTDG 194
+ P ++++ DG
Sbjct: 559 VAPNDITYNILLDG 572
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G+ P + ++L+ G AG + +A+ + +++ K+G P + +FN+LI CKSG+VE
Sbjct: 241 DSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVE 300
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + G C DV T+ LI + K G +DE L + G P + +I
Sbjct: 301 EGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLI 360
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ D A F + +G P+ Y LI + G EA + EMT GL
Sbjct: 361 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLK 420
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIE 208
P F + DG C D+ +E
Sbjct: 421 PDKITFTTLIDGC--CKDGDMESALE 444
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ GL G L+ + ++M +G P+ TF +LI+ CK G+
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGK 368
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + + G D+ TY LI + K G + EA RL++ + G P +
Sbjct: 369 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTT 428
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A + +G + +T LI+ R GR +A L +M G
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
P + +V D C K D+
Sbjct: 489 FKPDDPTYTMVIDCF--CKKGDV 509
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ G +G +E ++ M +G PD+ TF++LI +CK G ++
Sbjct: 277 RGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDE 336
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ +C G + T+ LI K G +D A + ++ G P Y +I
Sbjct: 337 GSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 396
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +A +E+ G P++ +TTLI C + G A M E G+
Sbjct: 397 GLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIEL 456
Query: 184 ISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
F + GL G+ HD + +
Sbjct: 457 DDVAFTALISGLCREGRVHDAGRMLTDM 484
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G ++ A + M+ QG PDL T+N+LI +CK G+
Sbjct: 344 MCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 403
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D T+ LI K G ++ A + +VE+G +
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTA 463
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ DA +++ G P+ P YT +I + G L EM G
Sbjct: 464 LISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDG 523
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++ + +GL G+
Sbjct: 524 HVPGVVTYNALMNGLCKQGQ 543
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 6 FNPPVRGRDLLVQGL--LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
F P+RG + L++ + L +E + + +++ G P + FN L+ CK+G+V
Sbjct: 207 FPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGN 266
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + K G V ++ LI K+G ++E FRL + +G P ++ +I
Sbjct: 267 ARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALIN 326
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ D+ F E+ +G PN +TTLI +GG+ A M G+ P
Sbjct: 327 GLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRP 386
Query: 184 ISRCFDLVTDGLKNCGKHDLAE 205
++ + +GL C DL E
Sbjct: 387 DLVTYNALINGL--CKVGDLKE 406
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P L+ G G +ESA ++ +M+++G + D F +LI +C+ G
Sbjct: 414 MTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGR 473
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V M + G D TY ++I K G + F+LL + DGH P Y
Sbjct: 474 VHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNA 533
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
++ G ++GQ +A + G PN Y L+ + G V+
Sbjct: 534 LMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDV 582
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G + A +M+ M+ G PD T+ +I+ CK G+V+ ++ + G
Sbjct: 464 LISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDG 523
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY L+ + K G + A LL ++ G P Y ++ G + G D
Sbjct: 524 HVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVD 583
Query: 136 CFFSEIKIKGHPPNRPVYTTLI 157
F SE KG + YT L+
Sbjct: 584 IFNSE---KGLVTDYASYTALV 602
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V L+ L G ++ A N+MI +G P++ F+SL+ +C G+
Sbjct: 362 MRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+++ V G C D + L+ + G + EA RL+ ++ G P Y
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNT 481
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D+A + G PN YT L+ + R +A + EM G
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+TP+ ++ + GL G+ A ++
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANEL 568
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++ GL A ++ AK + +MI +G PD T+N LI +G+
Sbjct: 187 MMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGK 246
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V+M + G D TY +L+ + K G EA ++ G P ++YA
Sbjct: 247 WKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAI 306
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +G + F + G PNR ++ + + EA + +M + G
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG 366
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L+P F + D L G+ D A
Sbjct: 367 LSPDVVSFGALIDALCKLGRVDDA 390
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ G L+ G + QM+ +M G +PD T+ L++ +CK+G
Sbjct: 222 MIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGR 281
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ S+ + G DV+ Y IL+ + G + E L +V +G +P ++
Sbjct: 282 CREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNI 341
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ ++ ++A F++++ +G P+ + LI + GR +A +M G
Sbjct: 342 MFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG 401
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+TP F + GL GK + AE++
Sbjct: 402 VTPNIFVFSSLVYGLCTVGKWEKAEEL 428
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P V + ++ G G +E A + +M+ QG P++ T+ ++I+ +CK+
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G D TY LI G E ++L + G P YA
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A FF + KG P+ +Y L+ G E ++L M G
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331
Query: 181 LTPISRCFDLV 191
++P R F+++
Sbjct: 332 VSPNRRIFNIM 342
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 9/209 (4%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVN---KMIKQGSD---PDLETFNSLIETICKSGEVEF 63
VR + L+ + AG +++++V+ +M ++ S P+ T++ LI C+ G +E
Sbjct: 49 VRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEH 108
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR-LLHNLVEDGHNPFPSLYAPII 122
+ + K G +V L+ + A +DEA LL + E G P Y +I
Sbjct: 109 GFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVI 168
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G FR GQ + A+ F E+ +G PPN YTT+I + A +M + G+
Sbjct: 169 NGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVK 228
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P + ++ + G + GK E ++ LE
Sbjct: 229 PDNGTYNCLIHGYLSTGKWK--EVVQMLE 255
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 16 LVQGLLNAGYLESAKQ-MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L++GL +A ++ A ++ +M + G PD+ +N++I + G+VE ++ +
Sbjct: 131 LLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ 190
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY +I + KA ++D A + +++ G P Y +I G G++ +
Sbjct: 191 GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEV 250
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ G P+ Y L+ + GR EA + M G+ P + ++ G
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG 310
Query: 195 LKNCG 199
G
Sbjct: 311 YATKG 315
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ GL G A ++ MI + D+ T+N ++ +CK+ V+
Sbjct: 540 KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDE 599
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+M+ +C D T+ I+I A+ K G ++A L + G P Y I +
Sbjct: 600 AFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAE 659
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G + FS ++ G PN + L+ G A YL ++ E
Sbjct: 660 NLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDE 714
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 8/225 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L++G A ++ A + +M+ +G P + T+N+++ + ++G
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y ++ + D+ TY I++ + K +DEAF++ L +
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +DA F+ I G P+ Y + G E M + G
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681
Query: 181 LTPISRCFDLVTDGLKNCGK--------HDLAEKIEQLEVSLRSV 217
P S + + L + G + L EK LE S S+
Sbjct: 682 TAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSM 726
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 67/150 (44%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ GL +++ A +M ++ + D TFN +I + K G E ++++ ++
Sbjct: 585 NIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISA 644
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY+++ + + G + E L + + G P + +++ RG
Sbjct: 645 YGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISR 704
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
A + ++ K + LI++ RG
Sbjct: 705 AGVYLYKLDEKNFSLEASTTSMLISLYSRG 734
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +++Q L +AG L AK + KM PD T+ +L++ SG+
Sbjct: 267 MEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE++ ++ G ++ +Y ++ A+ + G +DEA + + E G +P Y
Sbjct: 327 SQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNS 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + FD A F+ + G PN + I G+ G+ ++A M G
Sbjct: 387 LISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 446
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V L G+ +A+++
Sbjct: 447 IVPDVAAANAVLYSLAGSGRLGMAKRV 473
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 93/185 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++GL++ ++ A+ + +M + G PD T+N +++ + KS VE +++ + + G
Sbjct: 772 LIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKG 831
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ +++A L +NL+ +G +P P Y P++ G + G+ DA
Sbjct: 832 YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAE 891
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G PN +Y L+ G +M E G+ P + + ++ D L
Sbjct: 892 NLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTL 951
Query: 196 KNCGK 200
G+
Sbjct: 952 CTAGR 956
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ L +G L AK++ ++ G PD T+ +I+ K+ +
Sbjct: 442 MKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASK 501
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + + G DV LI + K G +EA++L H L E P Y
Sbjct: 502 ADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNT 561
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + E+ +PPN Y T++ + G A + L MTE G
Sbjct: 562 LLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKG 621
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 622 CAPDLSSYNTVMYGL 636
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ + ++ GL+ + LE A + ++ +G P T+ L++ + KSG+
Sbjct: 827 MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGK 886
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + + Y IL+ AG + +L +VE G NP Y
Sbjct: 887 MVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTI 946
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +D C+F ++ G P+ VY LI G+ R EA + EM + G
Sbjct: 947 LIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKG 1006
Query: 181 LTP 183
+ P
Sbjct: 1007 IIP 1009
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A Q M +G PD+ N+++ ++ SG + ++Y + +G D TY ++I
Sbjct: 435 AIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIK 494
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
SKA DEA ++VE G P +I ++ G+ ++A+ F ++K P
Sbjct: 495 CCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEP 554
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y TL++ GR G+ E L EMT P ++ V D L G+ + A
Sbjct: 555 TNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCA 610
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P + L+ G L A + A ++ N M G P+ T I KSG+
Sbjct: 372 MKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 431
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G DV+ ++ +++ +G + A R+ + L G +P Y
Sbjct: 432 SLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTM 491
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + + D+A FFS++ G P+ +LI +GG+ EA ++ EM
Sbjct: 492 MIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMK 551
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+ P + ++ + GL GK + E ++ LE R++
Sbjct: 552 IEPTNGTYNTLLSGLGREGK--VKEVMQLLEEMTRTI 586
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P L+ GLL +G + A+ + N+M++ G +P+ +N L+ +G E
Sbjct: 865 EGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTEN 924
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ +Y ILI + AG +++ L E G P +Y +I
Sbjct: 925 VCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLID 984
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++A F+E+K KG PN Y +LI G+ G+ EAA E+ G P
Sbjct: 985 GLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKP 1044
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++ + G G D A
Sbjct: 1045 SVFTYNALIRGYSVSGSTDNA 1065
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L++ + + +E ++ +M ++G + T+N++I + KS
Sbjct: 792 MKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKR 851
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++YY++ G TY L+ + K+G + +A L + ++E G P ++Y
Sbjct: 852 LEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNI 911
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G ++ F ++ +G P+ YT LI GR + Y ++ E+G
Sbjct: 912 LLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELG 971
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P ++L+ DGL GK +E+IE+
Sbjct: 972 LEPDLIVYNLLIDGL---GK---SERIEE 994
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + ++ L A + A ++ KM G PD+ T +I+ +C +G
Sbjct: 232 MEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGR 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + D TY L+ +G + + +V DG+N Y
Sbjct: 292 LSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ D+A F E+K KG P + Y +LI+ + F A M G
Sbjct: 352 VVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACG 411
Query: 181 LTP 183
+P
Sbjct: 412 PSP 414
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G + + L+ L+ +G+ A ++ M++ G P + T++ L+ K +
Sbjct: 162 MREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRD 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G +V +Y I I + +A DEA+ +L + + G P +
Sbjct: 222 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTV 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+ G+ DA F ++K P+R Y TL+ CG G M G
Sbjct: 282 IIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADG 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ V D L G+ D A
Sbjct: 342 YNDNIVSYTAVVDALCQVGRVDEA 365
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G NP ++ +L+ L AG L ++ + G +PDL +N LI+ + KS
Sbjct: 932 MVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSER 991
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V ++ + K G ++ TY LI + KAG EA ++ L+ G P Y
Sbjct: 992 IEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNA 1051
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G G D+A+ + ++ + G PN Y L
Sbjct: 1052 LIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+N + +V L G ++ A + ++M ++G P+ ++NSLI K+
Sbjct: 337 MVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADM 396
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + G + T+ + I K+G +A + ++ G P +
Sbjct: 397 FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANA 456
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ A F E+K G P+ YT +I C + + EA N+ +M E G
Sbjct: 457 VLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESG 516
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + D L GK + A ++
Sbjct: 517 CVPDVLALNSLIDTLYKGGKGNEAWQL 543
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A Q+ NK G ++NSLI + ++ +++ + +LG D TY +++
Sbjct: 750 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 809
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A+ K+ ++E ++ + G+ Y II G + + + A + + +G P
Sbjct: 810 AMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 869
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
Y L+ + G+ V+A N EM E G P ++++ +G + G +
Sbjct: 870 TPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTE 923
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
++G +S ++ N M+ G + ++ ++ ++++ +C+ G V+ + ++ + + G +
Sbjct: 323 DSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQY 382
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+Y LI KA M D A L +++ G +P + I + GQ A + +
Sbjct: 383 SYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHM 442
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K KG P+ ++ GR A E+ MG++P + + ++ +K C K
Sbjct: 443 KSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMM---IKCCSKA 499
Query: 202 DLAEK 206
A++
Sbjct: 500 SKADE 504
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + L+ L G A Q+ +K+ + +P T+N+L+ + + G+
Sbjct: 512 MVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGK 571
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + ++ TY ++ +SK G ++ A +L+++ E G P S Y
Sbjct: 572 VKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNT 631
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
++ G + + ++AF F ++K K P+ T++ + G EA + + E
Sbjct: 632 VMYGLIKEERLEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEALHTVKE 685
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L SA + M + G + T+N LI + KSG +E+Y ++ + G V TY
Sbjct: 150 GGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTY 209
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
+L+ A K +D LL+ + G P Y I+ + +FD+A+ +++
Sbjct: 210 SVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMED 269
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
G P+ +T +I + GR +A +M
Sbjct: 270 SGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKM 302
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G + Q+ + M KQ ++ TF ++ + G + + + G + TY
Sbjct: 115 GRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTY 174
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI + K+G EA + +VEDG +P Y+ ++ ++ D +E++
Sbjct: 175 NGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEA 234
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PN YT I + G+ RF EA + L +M + G P ++ L + G+
Sbjct: 235 RGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSD 294
Query: 204 AEKI 207
A+ +
Sbjct: 295 AKAV 298
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 2/198 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G+L +E + + + +G + LI +CK + +++ LG
Sbjct: 702 LMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG 761
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+Y LI + +ID A L + G P Y I+ + + ++
Sbjct: 762 VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEML 821
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG+ Y T+I+ + R +A + + G +P + + DGL
Sbjct: 822 KVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGL 881
Query: 196 KNCGKHDLAEKI--EQLE 211
GK AE + E LE
Sbjct: 882 LKSGKMVDAENLFNEMLE 899
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 3/208 (1%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + +L+ GL G A++M + M +G P+ T+ LI +C+ G E +
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARK 254
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++Y + G+ D + L+ K G + EAF LL +DG Y+ +I G F
Sbjct: 255 LFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
R ++ AF ++ + + P+ +YT LI + G+ +A L M G+TP +
Sbjct: 315 RARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTY 374
Query: 187 CFDLVTDGLKNCGKHDLAE-KIEQLEVS 213
C++ V L CG+ L E + QLE+S
Sbjct: 375 CYNAVIKAL--CGRGLLEEGRSLQLEMS 400
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G +P +L+ GL G E A+++ +M G+ PD N+L++ CK G
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGR 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ K G + Y LI + +A +AF L N+++ P LY
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTI 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTE 178
+I+G + G+ +DA + KG P+ Y +I +CGR G E + +EM+E
Sbjct: 344 LIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGR-GLLEEGRSLQLEMSE 401
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 24/221 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +++ L G LE + + +M + S PD T LI ++C++G
Sbjct: 364 MPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN------------LVE 108
V E++ + K G V+T+ LI + K+G + EA LLH L
Sbjct: 424 VRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAH 483
Query: 109 DGHNPFPSLY--APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G+ F ++ I+K F D G+ P+ Y LI R G
Sbjct: 484 SGNRSFDTMVQSGSILKAYKNLAHFADT----------GNSPDIVSYNVLINGFCREGDI 533
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
A L + GL+P S ++ + +GL G+ + A K+
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 14/216 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + +L+QGL AG +E A +++ M +G PD +N++I+ +C G
Sbjct: 329 MLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGL 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + S D T+ ILI ++ + G++ +A + + + G +P + +
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNA 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK---------GHPPNRPVYTTLITMCGRGGRFVEAAN 171
+I G + G+ +A ++++ H NR T + + G ++A
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMV-----QSGSILKAYK 503
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + G +P ++++ +G G D A K+
Sbjct: 504 NLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKL 539
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL-----ETFNSLIETICKSG 59
G +P V + L+ GL +G L+ A+ +++KM + G L + N +T+ +SG
Sbjct: 438 GCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVGRPASLFLRLAHSGNRSFDTMVQSG 496
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ + G+ D+ +Y +LI + G ID A +LL+ L G +P Y
Sbjct: 497 SILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYN 556
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R G+ ++AF F H P VY +L+T R + + A N M+
Sbjct: 557 TLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSCRRRKLLVAFNLWMKY--- 611
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK 206
L IS D + ++ C K E+
Sbjct: 612 -LKKISCLDDETANEIEQCFKEGETER 637
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF +RG L+ GL A A ++ M+K+ PD+ + LI+ + K+G++E
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ S+ G D Y +I A+ G+++E L + E P + +I
Sbjct: 358 LKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
R G A F EI+ G P+ + LI + G EA L +M
Sbjct: 418 MCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE--MYYSVC 72
+L+ G E A + +M + PD+ T+N ++ + + +V F + +Y +
Sbjct: 132 VLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMRE-DVFFMLAFAVYNEML 190
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
K ++ T+ IL+ + K G +A ++ ++ G +P Y +I G +RG +
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPE 250
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA F E+K G+ P+ + L+ + GR VEA L + G R + +
Sbjct: 251 DARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 193 DGLKNCGKHDLA 204
DGL ++ A
Sbjct: 311 DGLFRARRYTQA 322
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
Q + ++ G D F LI K G E VE + + + DV TY +++ +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIM 172
Query: 91 SKAGMIDE-AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+ + AF + + +++ +P + ++ G +++G+ DA F ++ +G PN
Sbjct: 173 MREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 150 RPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
R YT LI+ +C RG +A EM G P S + + DG G+ + E E
Sbjct: 233 RVTYTILISGLCQRGSP-EDARKLFYEMKASGNYPDSVAHNALLDGFCKLGR--MVEAFE 289
Query: 209 QLEV 212
L +
Sbjct: 290 LLRL 293
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+D G +P + ++L+ G G ++ A +++N + +G PD T+N+LI + + G
Sbjct: 509 ADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E +++Y+ V Y+ L+ + + AF L ++ + A
Sbjct: 569 EEAFKLFYAKDDFRHSPAV--YRSLMTWSCRRRKLLVAFNLWMKYLKK-ISCLDDETANE 625
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
I+ F+ G+ + A E+ + YT + + GRF EA
Sbjct: 626 IEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEA 673
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ L AG + A +++ M PDL TFN+L++ CK+G + +E+
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEV 293
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+C+ DV TY IL+ + + G + AF LL +V G+ P Y ++ G +
Sbjct: 294 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 353
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ ++A E+ ++G +Y++L++ R G +A L EM + + P
Sbjct: 354 SGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFT 413
Query: 188 FDLVTDGL 195
+++V GL
Sbjct: 414 YNIVLGGL 421
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V ++LV G+ G +E A ++++ M G PD+ T+NS+I +C +G+
Sbjct: 195 MKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V E + K SC+ D+ T+ L+ KAGM+ A +L + + P Y
Sbjct: 255 VVEAAE----ILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G R GQ AF EI +G+ P+ YT+L+ + G EA + EM+
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370
Query: 180 G 180
G
Sbjct: 371 G 371
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +LV GL G ++ A ++ ++++QG PD+ + SL++ +CKSGE+E ++
Sbjct: 304 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 363
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G V Y L+ +AG + +A +L +V P Y ++ G +
Sbjct: 364 VKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIK 423
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G A S++ +G+ P+ Y TLI + R EA + EM G P
Sbjct: 424 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVT 483
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
V GL G+ D A +
Sbjct: 484 LGSVVFGLCRVGRVDDAWSL 503
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ ++++ GL+ G + A +++ ++ +G PD+ T+N+LI+ +CK+ V ++
Sbjct: 409 PPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 468
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G + T ++ + + G +D+A+ L+ + H P +Y +I G +
Sbjct: 469 ADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 528
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ DDA ++ +G + Y LI GGR EA EM G P
Sbjct: 529 SDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V LV G AG + A++++ +M+ P L T+N ++ + K G
Sbjct: 367 MSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 426
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + G DV TY LI + KA + EA L + G P
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS 486
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ DDA+ E+ K H PN VYT+LI + R +A L M G
Sbjct: 487 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546
Query: 181 LT 182
+
Sbjct: 547 VA 548
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 4/209 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ V + L+ L+ +G+ ++ ++ G P+L TF LI CK+G+
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E ++ + DV + +LI + K G D+A +L N+ P Y +I G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 125 AFRRGQFDDAFCFFSEIKIKG--HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ G + A E+ KG P+ Y TLI R R EA + +M G+
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P +++ G+ C D+ E +E L+
Sbjct: 202 PDVLTCNILVSGI--CKDGDVEEALEILD 228
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P V LV GL +G +E A ++V +M +G + ++SL+ C++G V
Sbjct: 335 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHK 394
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + + + TY I++ + K G I +A L+ +LV G+ P Y +I
Sbjct: 395 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 454
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + +A E+ +G PN +++ R GR +A + ++EM+ P
Sbjct: 455 GLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAP 514
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ + DGL + D A
Sbjct: 515 NVVVYTSLIDGLCKSDRMDDA 535
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + + L+ G AG L A +++ +M ++ PD+ T+ L+ +C+ G+V+
Sbjct: 268 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 327
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + G DV Y L+ + K+G I+EA +L+ + G +Y+ ++ G
Sbjct: 328 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYC 387
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMTEMGLTPI 184
R G A +E+ P P++T I + G + G +A + + ++ G P
Sbjct: 388 RAGNVHKAREILAEMVSINMVP--PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 445
Query: 185 SRCFDLVTDGL 195
++ + DGL
Sbjct: 446 VVTYNTLIDGL 456
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
+ G D+ ++N L++ + KSG ++Y + G ++ T+KILI KAG
Sbjct: 20 QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
A L L E P ++ +I G F+ G D A F ++ P Y T+I
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 158 TMCGRGGRFVEAANYLMEMTEMG 180
+ + G +A L EM G
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKG 162
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P +V GL G ++ A +V +M ++ P++ + SLI+ +CKS
Sbjct: 472 MASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 531
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ G D Y+ LI ++S G + EA + +V G P S
Sbjct: 532 MDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKT 591
Query: 121 IIKGAFRRGQFD 132
+ + A F+
Sbjct: 592 LEEAAMSNSVFE 603
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V +L+ G ++ A + +M ++ P + T++SLI+ +CKSG
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G A+V TY LI + K G +D A L + + + G P +
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA F ++ KG+ + Y +I + G EA L +M E G
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + FD++ + L ++D AEK+
Sbjct: 510 CVPNAVTFDIIINALFKKDENDKAEKL 536
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V ++LV L G ++ AK ++ M+K PD+ T+++L++ E
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ +G DV +Y ILI K M+DEA L + + P Y+
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + E++ +G P N Y +LI + G A +M + G
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
+ P S F ++ DGL G+ D E + L
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQDL 470
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++L+ + G + ++ K++K+G P TF +LI+ +C G+V
Sbjct: 88 KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNK 147
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G D +Y LI V K G A +L+ + P +Y II
Sbjct: 148 ALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 207
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +A+ FSE+ KG + YTTLI + EA L EM + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP 267
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++++ D L C + + E L V L++
Sbjct: 268 NVYTYNILVDAL--CKEGKVKEAKNVLAVMLKA 298
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P L++GL G + A +K++ QG D ++ +LI +CK G+
Sbjct: 123 RGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRG 182
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + +V Y +I A+ K ++ EA+ L + G + Y +I
Sbjct: 183 AIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIY 242
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + +A +E+ +K PN Y L+ + G+ EA N L M + + P
Sbjct: 243 GFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKP 302
Query: 184 ISRCFDLVTDG 194
+ + DG
Sbjct: 303 DVITYSTLMDG 313
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 84/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + L+ GL +G + ++++M +G ++ T+NSLI+ +CK+G
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G T+ IL+ + K G + +A +L+ G++ Y
Sbjct: 425 LDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNV 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G ++A S+++ G PN + +I + +A L +M G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544
Query: 181 L 181
L
Sbjct: 545 L 545
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 84/193 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ L + A + ++M +G D+ T+ +LI C + +++ + +
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGL 256
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ +V TY IL+ A+ K G + EA +L +++ P Y+ ++ G F
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A F+ + + G P+ YT LI + EA N EM + + P
Sbjct: 317 VYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 188 FDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 377 YSSLIDGLCKSGR 389
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 3/211 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ + ++ + +A + +++ +G PDL T N LI C G++ F +
Sbjct: 57 PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G T+ LI + G +++A L+ G Y +I G +
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G A +I + PN +Y T+I + EA EMT G++
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
+ + G C L E I L E+ L+++
Sbjct: 237 YTTLIYGF--CIASKLKEAIGLLNEMVLKTI 265
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A N+M+ P + FN ++++ K V + + + G D+ T I
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI G I F +L +++ G+ P + +IKG +GQ + A F ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159
Query: 146 HPPNRPVYTTLI 157
++ Y TLI
Sbjct: 160 IKFDQVSYGTLI 171
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+QG G L AK++V++M+ +G P++ FNS+I ++CK G V +++ V +
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G DV T+ LI G I++AF +L ++ G P Y +I G R G+ DD
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT-PISRCFDLVTD 193
F E+ KG P Y ++ GR V A EM E G T IS C ++
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTC-GIILG 656
Query: 194 GL--KNCGKHDLA 204
GL NC +A
Sbjct: 657 GLCRNNCDDEAIA 669
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + ++ G +G + M +M QG P++ T NS + ++CK G+
Sbjct: 288 MISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGK 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + S+ G ++ TY +L+ + G + L +++ +G ++
Sbjct: 348 SKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNI 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG D+ F++++ +G P+ Y +I R GR +A + +M MG
Sbjct: 408 VIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 181 LTP 183
L P
Sbjct: 468 LKP 470
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 37/239 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ--GSDPDLETFNSLIETICKS 58
M + G P + +V+ L + A +++ M+K+ G P++ T+N++I + +
Sbjct: 181 MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFRE 240
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GEV +++ + + G DV TY +I A+ KA +D+A +L ++ +G P Y
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTY 300
Query: 119 APIIKGAFRRGQFDD-------------------------AFC----------FFSEIKI 143
+I G GQ+ + + C FF +
Sbjct: 301 NCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
KGH PN Y+ L+ G FV+ N M G+ R F++V D G D
Sbjct: 361 KGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMD 419
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P + +L+ G G + N M G D FN +I+ K G
Sbjct: 358 MAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGM 417
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G D TY I+I A S+ G + +A + ++ G P +Y
Sbjct: 418 MDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHS 477
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP-PNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+G G A SE+ +G P PN + ++I + GR VEA + + +
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
G P F+ + DG GK + A
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKA 562
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +++ GL N G AK+M ++MI+ G+ D+ T ++ +C++
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ + + +++ +I A+ K +EA L ++ G P S Y
Sbjct: 664 DDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGV 723
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+IK + G ++A FS ++ G P+ + +I + G V+A NY+ ++
Sbjct: 724 MIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKV 779
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ L A ++ A+ ++ +MI G P+ T+N +I SG+
Sbjct: 253 MMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQ 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M+ + G ++ T + ++ K G EA ++ GH P Y+
Sbjct: 313 WKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSV 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G F D F+ ++ G ++ V+ +I G+ G E +M E G
Sbjct: 373 LLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQG 432
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
+ P + + +V G+ D +K Q+
Sbjct: 433 VIPDACTYGIVIAAFSRMGRLADAMDKFNQM 463
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + + L G + A + + M +G P+L T++ L+ G
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGC 382
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ S+ G AD + I+I A K GM+DE + + E G P Y
Sbjct: 383 FVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGI 442
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ DA F+++ G P VY +LI G V+A + EM G
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRG 502
Query: 181 L 181
+
Sbjct: 503 I 503
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P +++ G L A N+MI G P+ ++SLI+ C G
Sbjct: 428 MQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGN 487
Query: 61 VEFCVEMYYSVCKLG-SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ E+ + G ++ + +I ++ K G + EA + ++ G P +
Sbjct: 488 LVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFN 547
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G G+ + AF + G P+ Y TLI R GR + EM
Sbjct: 548 SLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSK 607
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ P + + ++ GL N G+ A+K+
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKM 635
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G G +E A +++ MI G +PD+ ++N+LI+ C++G ++
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G TY I++ + G A ++ H ++E G S I+ G
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R D+A F ++ N + T+I + + EA ++ GL P
Sbjct: 658 LCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPN 717
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ + ++ L G + A+ + L
Sbjct: 718 ASTYGVMIKNLLKEGSVEEADNMFSL 743
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 76/191 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G G ++ + +M+ +G P T+ ++ + G
Sbjct: 569 MISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + + + G+ D+ST I++ + + DEA + L ++
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ + ++A F I G PN Y +I + G EA N M + G
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748
Query: 181 LTPISRCFDLV 191
P SR + +
Sbjct: 749 CAPSSRLLNYI 759
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 3/174 (1%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + T+N L++ C++ ++ K G DV IL+ + A D+ L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 103 L-HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI--KIKGHPPNRPVYTTLITM 159
L H + E G P Y ++K + A + K G PN Y T+I
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
R G +A N EM + G+ P + + D L D AE + + +S
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS 290
>gi|224576643|gb|ACN56995.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ G + Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTP 183
G+TP
Sbjct: 192 KGITP 196
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 155
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y G S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERL 114
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 37/249 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P V + ++ G A ++ A + +M+ +G PD+ T+ +LI CKS +
Sbjct: 135 MAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRD 194
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMI------------------------ 96
V +E+ V + G D+ TY +I + KAG +
Sbjct: 195 VGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIG 254
Query: 97 --------DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
DEA RLL +V+D P Y ++ + G+ DDA+ F ++ P
Sbjct: 255 GYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 314
Query: 149 NRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +T+L+ +CG GR +A L E+T G P ++ V DG K + K
Sbjct: 315 DVVTFTSLVDGLCGE-GRMEDALELLEEITRRGCPPTIYTYNCVVDGY---CKANQVRKA 370
Query: 208 EQLEVSLRS 216
E+L RS
Sbjct: 371 EELVADFRS 379
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +P V LV GL G +E A +++ ++ ++G P + T+N +++ CK+ +
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---L 117
V E+ G + TY IL+ +AG D+A + L L +G P P+ +
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG-GPCPTSVAM 425
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
YA I+ R G+ DDA F+ E+ +G+ P + T++ + + +A L EM
Sbjct: 426 YAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMI 485
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ G TP D V G + +K ++L LR
Sbjct: 486 KYGHTPGPGTCDAVVSAYCRAG---MIQKADELASELR 520
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ +GF P + ++ GL AG L A + +M P T+NSLI C++G+
Sbjct: 205 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGD 261
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + DV TY L+ A K G +D+A+ L +V + +P +
Sbjct: 262 MDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 321
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +DA EI +G PP Y ++ + + +A + + G
Sbjct: 322 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRG 381
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQL 210
P + ++++ G G+ D A + ++QL
Sbjct: 382 FVPNTVTYNILVAGCCRAGRTDQALQYLDQL 412
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P V L+ G L+ A ++ +M+ PD+ TF SL++ +C G
Sbjct: 272 MVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 331
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + + G + TY ++ KA + +A L+ + G P Y
Sbjct: 332 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNI 391
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G R G+ D A + ++ +G P + +Y ++ R GR +A + EM +
Sbjct: 392 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 451
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G P + F V L C H + E LE
Sbjct: 452 RGYVPAAATFATVVFAL--CKAHQPQQAHELLE 482
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 1/199 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV GL A L A Q++ +M+ PD T +++++C V+ E+ + G
Sbjct: 45 LVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 104
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+ TY L+ + K +DEA L+ + E G P Y II G R + D+A
Sbjct: 105 MAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAH 164
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ +G P+ YT LI + L E+T G TP + V DGL
Sbjct: 165 GFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGL 224
Query: 196 KNCGK-HDLAEKIEQLEVS 213
G+ D + E++ +
Sbjct: 225 CKAGRLRDAVDIFEEMSCA 243
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG ++ A +++ KM+ PD+ T+ +L+ CK G ++ E++ +
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV T+ L+ + G +++A LL + G P Y ++ G + Q A
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAE 371
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM-TEMGLTPISRC-FDLVTD 193
++ + +G PN Y L+ C R GR +A YL ++ +E G P S + ++ D
Sbjct: 372 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 431
Query: 194 GLKNCGKHDLA 204
L G+ D A
Sbjct: 432 ALCRDGRTDDA 442
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++VQ L ++ A+++V +M+ +G + T+++L++ +CK ++ V + ++ +
Sbjct: 79 VVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAER 138
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V TY +I +A +DEA + +V +G +P Y +I G +
Sbjct: 139 GCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRG 198
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ +G P+ Y+T+I + GR +A + EM+ P + ++ + G
Sbjct: 199 LELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGG 255
Query: 195 LKNCGKHDLAEKI 207
G D A ++
Sbjct: 256 YCRAGDMDEAIRL 268
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEV 61
+GF P ++LV G AG + A Q ++++ +G + + +++ +C+ G
Sbjct: 380 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRT 439
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ V+ Y + + G +T+ ++ A+ KA +A LL +++ GH P P +
Sbjct: 440 DDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAV 499
Query: 122 IKGAFRRGQFDDAFCFFSEIKI 143
+ R G A SE+++
Sbjct: 500 VSAYCRAGMIQKADELASELRL 521
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G +AG + A ++N M K+G +P++ + LI+ +C++ +
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 61 -VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + ++ + + G AD+ TY LI K GMID+ + +L ++ + G P Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ ++ QF++ ++K +G P+ +Y +I + + G EA EM
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 180 GLTPISRCFDLVTDGLKNCG 199
GL+P F ++ +G + G
Sbjct: 442 GLSPGVDTFVIMINGFTSQG 461
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNA-GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M +GF P V +L+Q L ++ A ++ +M + G + D+ T+ +LI CK G
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + + K G TY ++ A K +E L+ + G +P +Y
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ A + G+ +A ++E++ G P + +I G +EA N+ EM
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Query: 180 GL 181
G+
Sbjct: 477 GI 478
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ +A ++ A +++++M K G +PD F L++ +CK+G V+ +++ + +
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-RE 230
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
++ + L+ + G + EA +L + E G P ++ ++ G G+ DA
Sbjct: 231 KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 290
Query: 135 FCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMG 180
+ ++++ +G PN YT LI +C R EA +EM G
Sbjct: 291 YDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG--SDPDLETFNSLIETICKS 58
M G +P V +++ G + G+L A +M+ +G S P T SL+ + +
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRD 497
Query: 59 GEVEFCVEMYYSVC-KLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
++E +++ + K SC +VS + I I A+ G + EA +++E P P+
Sbjct: 498 DKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPN 557
Query: 117 LYAPIIKG 124
YA ++KG
Sbjct: 558 TYAKLMKG 565
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 39 QGSDPDL---ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
+ ++P+L E F L+ + V+ VE+ + K G D + L+ A+ K G
Sbjct: 158 RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGS 217
Query: 96 IDEAFRLLHNLVEDGHNPFP---SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
+ EA ++ ED FP + ++ G R G+ +A ++K G P+ V
Sbjct: 218 VKEASKVF----EDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVV 273
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+T L++ G+ +A + + +M + G P C+ ++ L
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 5/222 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L+ G G + +A+ M KM PD+ TF SLI+ C++G+
Sbjct: 295 MIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGD 354
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + ++ TY ++I A+ K I EA LL L P P +Y P
Sbjct: 355 IRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNP 414
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D+A +E++ K P++ +T LI GR VEA + +M +G
Sbjct: 415 VIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIG 474
Query: 181 LTPISRCFDLVTDGLKNCGK-----HDLAEKIEQLEVSLRSV 217
P + + L GK H + E L +S S+
Sbjct: 475 CAPDNITISSLVACLLKAGKPSEAFHIVQTASEDLNLSFSSL 516
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 3/196 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ L+ G + A + + + S P+ TFN LI +C+ GEVE E++ ++
Sbjct: 167 NYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQS 226
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQF 131
G DV TY LI + KA +D A LL V+ ++ P + Y II G + G+
Sbjct: 227 FGCLPDVVTYNTLISGLCKANELDRACDLLKE-VQSRNDCSPDVMTYTSIISGFRKLGKL 285
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+ A F E+ G P + LI G+ G V A +M P F +
Sbjct: 286 EAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSL 345
Query: 192 TDGLKNCGKHDLAEKI 207
DG G L K+
Sbjct: 346 IDGYCRTGDIRLGLKV 361
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++L++GL G +E ++ N M G PD+ T+N+LI +CK+ E++ ++
Sbjct: 196 PNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDL 255
Query: 68 YYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
V C+ DV TY +I K G ++ A L ++ G P + +I G
Sbjct: 256 LKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFG 315
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G A ++ P+ +T+LI R G M ++P
Sbjct: 316 KIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIY 375
Query: 187 CFDLVTDGL-KNCGKHDLAEKIEQLEVS 213
+ ++ + L K+ H+ + + QL+ S
Sbjct: 376 TYSVIINALCKDNRIHEARDLLRQLKCS 403
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P V L++GL + A ++++M+++ PDL T+NSLI C++G
Sbjct: 284 MKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGH 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D TY I + K+ ++EA RL +L E+G + +Y+
Sbjct: 343 LDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSV 402
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A C F ++ K PN + LI G EA + +M +MG
Sbjct: 403 LIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMG 462
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P F+++ + G D A K Q
Sbjct: 463 LKPTVYTFNILIGRMLKQGDFDDAHKCLQ 491
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + + L+ G AG+L+SA ++++ M ++G PD T+ I+ +CKS
Sbjct: 318 MLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNR 377
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ S+ + G A+V Y +LI K G +DEA L ++ +P +
Sbjct: 378 VEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNA 437
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G +A F ++ G P + LI + G F +A L +M G
Sbjct: 438 LIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSG 497
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P++R ++ + + GK AE +
Sbjct: 498 EKPVARTYNAFIEVYCSAGKVQEAEDM 524
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++++G + V +L+ G G ++ A + KM+ + P+ TFN+LI +C +G
Sbjct: 388 LTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGN 447
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + K+G V T+ ILI + K G D+A + L ++ G P Y
Sbjct: 448 LKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNA 507
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G+ +A ++K +G PP+ YT+LI G+ G A + L M +
Sbjct: 508 FIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD 567
Query: 181 LTPISRCF 188
P F
Sbjct: 568 CEPSHHTF 575
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P R + L + +E A+++ + + ++G ++ ++ LI+ CK G+
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + + T+ LI + AG + EA L +V+ G P +
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G FDDA ++ G P Y I + G+ EA + +++M E G
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532
Query: 181 LTP 183
+ P
Sbjct: 533 VPP 535
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L++ G+++ AKQ + KMI+ G PD T S I C+S +V+ ++ +
Sbjct: 196 NLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFE---E 252
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ + +VS Y LI + +AG IDEA L + +D P Y +IKG R+
Sbjct: 253 MPNRNEVS-YNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHK 310
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+ + P+ Y +LI R G A L M E GL P R + D
Sbjct: 311 AMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFID 370
Query: 194 GLKNCGKHDLAEKI 207
L + + A ++
Sbjct: 371 FLCKSNRVEEARRL 384
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 29/220 (13%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L+ +L G + A + + KM+ G P T+N+ IE C +G+
Sbjct: 458 MVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGK 517
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +M + + G D TY LI A K G+ AF +L ++ + P +
Sbjct: 518 VQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLS 577
Query: 121 IIKGAFRRG-----------------------------QFDDAFCFFSEIKIKGHPPNRP 151
+IK F + +FD F E++ G P+
Sbjct: 578 LIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSK 637
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
Y LI+ + A L +M + G++P F+ V
Sbjct: 638 CYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAV 677
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 7/196 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G ++ Q+ +M+++ D+ TFN +I CK G V+ + + + G
Sbjct: 163 LLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAG 222
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D T I ++ +D AFR+ E+ N Y +I G G+ D+A
Sbjct: 223 LSPDYFTSTSFILGYCRSKDVDSAFRVF----EEMPNRNEVSYNQLIHGLCEAGRIDEAV 278
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F +K PN YT LI +C + +A L EM E L P ++ + G
Sbjct: 279 SLFVRMKDDCCYPNVYTYTALIKGLCRKNVH--KAMGLLDEMLERNLVPDLITYNSLIAG 336
Query: 195 LKNCGKHDLAEKIEQL 210
G D A ++ L
Sbjct: 337 QCRAGHLDSAYRLLSL 352
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 68/165 (41%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
++ +M K G PD + + LI ICK + +++ + K G + +I
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
K EA ++ +++ GH+P +I G + G+ + F +++ G+ +
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ LI + G E + EM + G R + ++T L
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A +V MI G P LE +LI + + GE E ++ + G D +KILI
Sbjct: 690 AANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILID 749
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ K G+++E +L + ++G N P Y+ + +
Sbjct: 750 GMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQ 784
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 87/239 (36%), Gaps = 32/239 (13%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIE------- 53
M ++G P L++ G SA ++ M +P TF SLI+
Sbjct: 528 MKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRY 587
Query: 54 TICKSGEV----------------------EFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ KSGE + +E++ + K G D Y+ LI +
Sbjct: 588 VVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGIC 647
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K + A +LL + ++G +P ++ +I + ++ +A ++ GH P
Sbjct: 648 KVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLE 707
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
TLI G + ++ G + ++ DG+ K L E+ QL
Sbjct: 708 HCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGML---KQGLVEEFSQL 763
>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
Length = 461
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + +V G ++G L A + M G +PD+ T N L++ +CK+
Sbjct: 253 MVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRR 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY L+ + G + E LL +V +G P ++
Sbjct: 313 CTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNI 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ + D+A FS+++ +G PN Y T+I + + GR +A L +M G
Sbjct: 373 LICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEG 432
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + G C K + AE++
Sbjct: 433 LTPDIIVYTPLIHGFCTCDKWEKAEEL 459
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M+ G P V +L++GL + + A +++ M G D PD+ +N++I K
Sbjct: 146 MTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFKE 205
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+ + Y+ + G DV TY +I A+ KA +D+A +L+ +V++G P Y
Sbjct: 206 GDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTY 265
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A F + G P+ L+ + R EA MT+
Sbjct: 266 NSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTK 325
Query: 179 MGLTP 183
GL P
Sbjct: 326 CGLKP 330
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P + +L+ AG L+ + +IK+G + TF L++ +C ++
Sbjct: 81 TPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMD 140
Query: 67 MYY-SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS--LYAPIIK 123
+ + +LG +V + IL+ + EA LL + +DG + P LY +I
Sbjct: 141 IVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVIN 200
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G F+ G D A+ + E+ +G P+ Y+++I + +A L M + G+ P
Sbjct: 201 GFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 260
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
R ++ + G C L E I
Sbjct: 261 NCRTYNSIVHGY--CSSGQLTEAI 282
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 11/161 (6%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N ++ + + V Y + + G+ ++ TY
Sbjct: 29 EDARHVFDELLRRGKGATIYGLNRALDDVARHSPAA-AVSRYNRMARAGADEVTPNLYTY 87
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA----FCFFS 139
+LI +AG +D F L N+++ G + P++KG + DA C +
Sbjct: 88 SVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMT 147
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G PN T L+ R EA L M + G
Sbjct: 148 QL---GCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDG 185
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG G + L+ L ++ A M M +G PD+ TFNSLI +CK +
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +Y + G A+ TY LI A + G + EA +L+++++ G Y
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK R G + F ++ KG PN LI R G A +L +M G
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647
Query: 181 LTPISRCFDLVTDGLKNCGK 200
LTP ++ + +GL G+
Sbjct: 648 LTPDIVTYNSLINGLCKTGR 667
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G ++ A ++VN M+ +G D T+N LI+ +C++G +E + ++ + G
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ + ILI + + G I A L +++ G P Y +I G + G+ +A
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F +++++G P+ Y TLI+ + G F +A L + G P
Sbjct: 673 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 720
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG NP ++L+ GL G ++ A + + MI +G PD+ T+NSLI +CK+G
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G C D TY LI K GM D+A LL V+ G P +
Sbjct: 668 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 727
Query: 121 IIKGAFRRG 129
++ + G
Sbjct: 728 LVSNFIKEG 736
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ GL GYL SA++++N+M +G +P++ T+ LI+ CK G
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G + Y LI A+ K + +A + ++ G P +
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + +F++A + ++ ++G N Y TLI R G EA + +M
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 573
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G LE A+ ++++M +G + +N LI +CK +
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + M+ + G D+ T+ LI + K +EA L +++ +G Y
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG +A +++ +G P + Y LI R G + +M G
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + +++ +GL G
Sbjct: 613 LNPNNISCNILINGLCRTGN 632
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L AG +E + M+ +G +P+ + N LI +C++G ++ +E + G
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY LI + K G EA L L +G P Y +I + G FDDA
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 707
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT 158
S G PN + L++
Sbjct: 708 LLLSRGVDSGFIPNEVTWYILVS 730
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + + GL + A ++V++M+ +G P+ T+ L+ +C+ G+V+ +
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH-NLVEDGHNPFPSLYAPIIKGAF 126
V +V + LI G +DEA ++H +++ G P Y +I G
Sbjct: 363 LNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 418
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
++G A +E++IKG PN YT LI + GR EA N L EM+ GL
Sbjct: 419 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLA 474
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV-E 62
+GF P +L+ GL G ++ A+ ++NK+ +P++ FN+LI G + E
Sbjct: 334 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYVSRGRLDE 389
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
M+ S+ +G D+ TY LI + K G + A L++ + G P Y +I
Sbjct: 390 AKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILI 449
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ G+ ++A E+ KG N Y LI+ + + +A N +M+ G
Sbjct: 450 DRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCK 509
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P F+ + GL K + A + Q
Sbjct: 510 PDIFTFNSLIFGLCKVNKFEEALGLYQ 536
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNK-MIKQGSDPDLETFNSLIETICKSGEVEFCV 65
NP V + L+ G ++ G L+ AK ++++ M+ G PD+ T+N+LI +CK G +
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E+ + G +V TY ILI K G ++EA +L + G Y +I
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + DA F ++ KG P+ + +LI + +F EA +M G+
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 4/200 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R ++++ LL + + +M+ +G P + TF +++ +C EV+ +
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G + Y+ LI A+SK G ++E +LL ++ G P + + I G +
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ +A + ++G PN Y L+ R G+ EA L ++ P
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVL 373
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
F+ + +G + G+ D A+ +
Sbjct: 374 FNTLINGYVSRGRLDEAKAV 393
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 70/166 (42%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
+P ++N +++ + + ++Y + G V T+ +++ A+ +D A
Sbjct: 197 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 256
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
LL ++ G P +Y +I + G+ ++ E+ + G P+ + I
Sbjct: 257 LLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 316
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ R EAA + M G TP S + ++ GL GK D A +
Sbjct: 317 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + ++ G G + M +M ++G PD+ T NS + ++CK G+
Sbjct: 288 MISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGK 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + S+ G D+ TY +L+ + G + + L +++ +G S+Y
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +RG D+A F++++ +G P+ Y T+I R GR +A + +M MG
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 181 LTPISRCFDLVTDGL 195
L P + ++ + G
Sbjct: 468 LKPDTIVYNSLIQGF 482
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSGEVEF 63
G P + L+QG G L AK+++++M+ +G P+ FNS+I ++CK G V
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ V +G DV T+ LI G +++AF +L ++ G P Y+ ++
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD 586
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT- 182
G R G+ DD F E+ KG P Y ++ GR V A EM E G T
Sbjct: 587 GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646
Query: 183 PISRCFDLVTDGL--KNCGKHDLA 204
IS C ++ GL NC +A
Sbjct: 647 DISTC-GIILGGLCRNNCDDEAIA 669
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + + L G + A + + M +G PDL T++ L+ G
Sbjct: 323 MTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGY 382
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ S+ G AD S Y ILI A K GM+DEA + + E G P Y
Sbjct: 383 VVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGT 442
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ DA F+++ G P+ VY +LI G V+A + EM G
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502
Query: 181 L-TPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + F+ + + L G+ A+ I L + +
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHI 537
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ--GSDPDLETFNSLIETICKS 58
M + G P +++ L + A +++ M+K+ G P++ ++N++I +
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GEV +++ + + G DV TY I A+ KA +D+A +L ++ +G P Y
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTY 300
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G GQ+ + F E+ +G P+ + ++ + G+ EAA + M
Sbjct: 301 NCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 179 MGLTPISRCFDLVT 192
G P DLVT
Sbjct: 361 KGHKP-----DLVT 369
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +++ GL N G AK+M ++MI+ G+ D+ T ++ +C++
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + +++ +I A+ K +EA L ++ G P S Y
Sbjct: 664 DDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGV 723
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+I + G ++A FS ++ G P+ + +I + G +A NYL
Sbjct: 724 MITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYL 776
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQ-MVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
G V ++L++ L +A + A ++++M + G +PD +++++++++C+ +
Sbjct: 149 GLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQR 208
Query: 64 CVEMYYS-VCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+++ ++ V K G C+ +V +Y +I + G + +A L H +++ G P Y+
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSY 268
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I + D A ++ G P++ Y +I G++ E A EMT GL
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328
Query: 182 TP 183
P
Sbjct: 329 MP 330
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 90/206 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G G +E A +++ MI G +PD+ T+++L++ C++G ++
Sbjct: 538 GERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDG 597
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G TY I++ + G A ++ H ++E G S I+ G
Sbjct: 598 LILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R D+A F ++ N + T+I + + EA ++ GL P
Sbjct: 658 LCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPN 717
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ + ++ L G + A+ + L
Sbjct: 718 ASTYGVMITNLLKEGSVEEADNMFSL 743
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 75/189 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ G G ++ + +M+ +G P T+ ++ + G
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + + + G+ D+ST I++ + + DEA L L ++
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINT 688
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ + ++A F I G PN Y +IT + G EA N M + G
Sbjct: 689 MIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748
Query: 181 LTPISRCFD 189
P SR +
Sbjct: 749 CAPSSRLLN 757
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 69/174 (39%), Gaps = 3/174 (1%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR- 101
P + T+N L++ C++ ++ K G DV IL+ + A D+A
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI--KIKGHPPNRPVYTTLITM 159
LLH + E G P Y+ ++K + A + K G PN Y T+I
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
R G +A N EM + G+ P + D L D AE + + +S
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMIS 290
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P V L+ G +E A + +M ++ P+ T+++L+ +C G ++
Sbjct: 333 KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 392
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +++ + G D +Y IL+ + K +DEA LL + +P +Y +I
Sbjct: 393 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 452
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ + A FS + KG PN YT +I + G EA+ EM G +P
Sbjct: 453 GMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 512
Query: 184 ISRCFDLVTDG-LKN 197
++L+T G L+N
Sbjct: 513 NGCTYNLITRGFLRN 527
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ + L A ++ K++K G P++ TFN+LI +C G+
Sbjct: 85 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K G A RLL ++ + P +Y
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + Q AF FSE+ +G P+ Y +LI + L EM
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAE 205
+ P F V D L GK HD+ +
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVD 293
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +V L G + A +V+ MIK+G +P++ T+N+L++ C E
Sbjct: 260 MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE 319
Query: 61 VEFCVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ V+++ + VCK G DV +Y LI K I++A L + P Y+
Sbjct: 320 MDEAVKVFDTMVCK-GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G G+ DA F E+ +G P+ Y L+ + R EA L +
Sbjct: 379 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + +V DG+ G+ + A +
Sbjct: 439 NMDPDIQIYTIVIDGMCRAGELEAARDL 466
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P L+ GL + G L+ A + ++M+ +G PD ++ L++ +CK+
Sbjct: 365 MCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRR 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ D+ Y I+I + +AG ++ A L NL G +P Y
Sbjct: 425 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F E+K KG+ PN Y + R + L EM G
Sbjct: 485 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 544
Query: 181 LTP-ISRCFDLVT----DGLKNCGKHDLAEKIE 208
+ +S LV DGL K L+E ++
Sbjct: 545 FSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L++GL G + + +KMI +G P++ T+ +LI +CK G
Sbjct: 124 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 183
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + S+ + G+C DV Y +I ++ K + +AF L ++ G +P Y +I
Sbjct: 184 IRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 242
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +E+ PN +++T++ + G+ +EA + + M + G+ P
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIE 208
++ + DG +C + ++ E ++
Sbjct: 303 NVVTYNALMDG--HCLRSEMDEAVK 325
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + + L+ L N + ++N+M+ P++ F+++++ +CK G+
Sbjct: 225 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + K G +V TY L+ +DEA ++ +V G P Y+
Sbjct: 285 VMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYST 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + + A F E+ K PN Y+TL+ GR +A EM G
Sbjct: 345 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 404
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P + ++ D L C L E I L+
Sbjct: 405 QIPDFVSYCILLDYL--CKNRRLDEAIALLK 433
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V ++ L + A + ++MI QG P + T+NSLI +C E
Sbjct: 190 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 249
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +V + ++ A+ K G + EA ++ +++ G P Y
Sbjct: 250 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 309
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEM 179
++ G R + D+A F + KG P+ Y+TLI + R +E A YL EM
Sbjct: 310 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR-IEKAMYLFEEMCRK 368
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
L P + + + GL + G+
Sbjct: 369 ELIPNTVTYSTLMHGLCHVGR 389
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 2/193 (1%)
Query: 7 NPPVRGRDL--LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+PP D L+ + + + + ++M G P++ T N LI + C + F
Sbjct: 54 HPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFA 113
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + KLG +++T+ LI + G I E L ++ +G P Y +I G
Sbjct: 114 FSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLING 173
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A ++ P+ VYT++I + + +A N EM G++P
Sbjct: 174 LCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPS 233
Query: 185 SRCFDLVTDGLKN 197
++ + L N
Sbjct: 234 IFTYNSLIHALCN 246
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 71/175 (40%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
LN L+ A N+M+ P + F L+ +I K + + + + G ++
Sbjct: 35 LNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNI 94
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T ILI + + AF +L +++ GH P + + +I+G G+ + F +
Sbjct: 95 YTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDK 154
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + G A L M + P + + D L
Sbjct: 155 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL 209
>gi|224576615|gb|ACN56981.1| At1g03560-like protein [Capsella rubella]
gi|224576617|gb|ACN56982.1| At1g03560-like protein [Capsella rubella]
gi|224576619|gb|ACN56983.1| At1g03560-like protein [Capsella rubella]
gi|224576621|gb|ACN56984.1| At1g03560-like protein [Capsella rubella]
gi|224576623|gb|ACN56985.1| At1g03560-like protein [Capsella rubella]
gi|224576627|gb|ACN56987.1| At1g03560-like protein [Capsella rubella]
gi|224576629|gb|ACN56988.1| At1g03560-like protein [Capsella rubella]
gi|224576635|gb|ACN56991.1| At1g03560-like protein [Capsella rubella]
gi|224576637|gb|ACN56992.1| At1g03560-like protein [Capsella rubella]
gi|224576647|gb|ACN56997.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTP 183
G+TP
Sbjct: 192 KGITP 196
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 155
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y G S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + L+ GL AG +E AK ++N+M G P T +++ +
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + G CAD++ Y L+ + GM +A +L + G P +
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G D+AF + ++ G PN + TL+ GR E+ L EM + G
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799
Query: 181 LTPISRCFDLVTDG 194
+ P + +D++ G
Sbjct: 800 IEPSNLTYDILVTG 813
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V G + LV G G +E+A + +M QG D+ +NSL+ +C++GEV+ +M
Sbjct: 174 VVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVD 233
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
++ + G +V TY + I + +D+AF L +V G P + ++ G + G
Sbjct: 234 TMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDG 293
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+F +A+ F E++ G PN Y LI + R E+ + L E+ G+ +
Sbjct: 294 RFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYT 353
Query: 190 LVTDGLKNCGKHDLAEKI 207
+ D L GK D A+ +
Sbjct: 354 ALMDWLCKEGKIDEAKDM 371
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 87/198 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V LV GL G A + +M K G+ P+ T+ LI+T+ K+
Sbjct: 270 MVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQR 329
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + V G D+ Y L+ + K G IDEA + + + D H P Y
Sbjct: 330 GNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTV 389
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G D A SE++ K PN ++++I + G +A +Y+ EM E G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449
Query: 181 LTPISRCFDLVTDGLKNC 198
+ P + V DG C
Sbjct: 450 IDPNVVTYGTVIDGSFKC 467
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLET--FNSLIETICKSGEVEFCVEMYYSVCKLGS 76
GL G ++ A + M++ G L+ +NSL++ CK G++E + + G
Sbjct: 146 GLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGV 205
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
DV Y L+ + +AG +D A ++ + DG P Y I RR DDAF
Sbjct: 206 GVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFS 265
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E+ KG P+ + L+ + GRF EA EM ++G P + ++ D L
Sbjct: 266 LYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTL 324
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 35/234 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVN-------------------------- 34
M +G V G + LV GL AG +++A+ MV+
Sbjct: 200 MKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNA 259
Query: 35 ---------KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+M+++G PD+ T ++L+ +CK G ++ + K+G+ + TY +
Sbjct: 260 VDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI ++KA +E+ LL +V G +Y ++ + G+ D+A F
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
H PN YT LI + G A L EM E ++P F + +GL G
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRG 433
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P + L+ G +G+L++A ++M+ G P++ TFN+L+ + +G
Sbjct: 725 MSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGR 784
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K G TY IL+ K EA RL +V G P S Y
Sbjct: 785 IGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNA 844
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G A F+E++ +G P Y L++ + E +L +M E G
Sbjct: 845 LISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKG 904
Query: 181 LTP-------ISRCF 188
+P ISR F
Sbjct: 905 FSPSKGTLSSISRAF 919
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G + + LV+ L G A ++ +M +G PD TFN+LI KSG
Sbjct: 690 MMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGH 749
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G +V+T+ L+ + AG I E+ +L+ + + G P Y
Sbjct: 750 LDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDI 809
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++ +A + E+ KG P Y LI+ + G +A EM G
Sbjct: 810 LVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869
Query: 181 LTPISRCFDLVTDG 194
+ P S +D++ G
Sbjct: 870 VLPTSCTYDILVSG 883
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K +P V ++ GL+ G++ A + +M ++G DP++ T+ ++I+ K
Sbjct: 410 MEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLG 469
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++Y+ + G + L+ + K G I++A L + E G Y
Sbjct: 470 QEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTT 529
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G AF E+ K P+ VY I G+ EA ++L EM G
Sbjct: 530 LIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTG 589
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + GK A K+
Sbjct: 590 LKPDQVTYNTMIAAQSREGKTAKALKL 616
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G ++ AK M + P+ T+ LI+ +CK+G V+ ++ + +
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T+ +I + K G + +A + + E G +P Y +I G+F+ + A
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAAL 474
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E+ +G N+ + +L+ + G+ +A EM E G+ + + DGL
Sbjct: 475 DVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534
Query: 196 KNCGKHDLAEKIEQ 209
G A K+ Q
Sbjct: 535 FKTGNLPAAFKVGQ 548
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V + L+ GL +AG + + ++N+M K+G +P T++ L+ K
Sbjct: 764 GISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEA 823
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V +Y + G VSTY LI SK GM+ +A L + + G P Y ++ G
Sbjct: 824 VRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSG 883
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+ + F ++K KG P++ +++ + G EA L
Sbjct: 884 WSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 2/197 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D LV GL G +E A+ + +M ++G D + +LI+ + K+G + ++ + +
Sbjct: 493 DSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
D Y + I + G EA L + G P Y +I R G+
Sbjct: 553 KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAK 612
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMGLTPISRCFDLVT 192
A + +K PN Y+TLI G VE A YL+ EM+ G +P S V
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGA-VEKAKYLLNEMSSSGFSPTSLTHRRVL 671
Query: 193 DGLKNCGKHDLAEKIEQ 209
+ DL +I +
Sbjct: 672 QACSQGRRSDLILEIHE 688
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P V ++ G E+A + ++M+ +G + + +SL+ + K+G+
Sbjct: 445 MKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGK 504
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G D Y LI + K G + AF++ L E P +Y
Sbjct: 505 IEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNV 564
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G+ +A F E++ G P++ Y T+I R G+ +A L M
Sbjct: 565 FINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS 624
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + + GL G + A+
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAK 649
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ L AG ++ A+Q++++M ++ P++ TF+S+I + K G V + + +
Sbjct: 389 VLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY +I K + A + H ++ +G + ++ G + G+ + A
Sbjct: 449 GIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKA 508
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ +G + YTTLI + G A E+TE L P + +++ +
Sbjct: 509 EALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINC 568
Query: 195 LKNCGKHDLAEK-IEQLE 211
L GK AE +E+++
Sbjct: 569 LCMLGKSKEAESFLEEMQ 586
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++K P ++ + L G + A+ + +M G PD T+N++I + G+
Sbjct: 550 LTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGK 609
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + + ++ TY LI + +AG +++A LL+ + G +P +
Sbjct: 610 TAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRR 669
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+++ A +G+ D E + G + VY TL+ + G +A L EM+
Sbjct: 670 VLQ-ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGR 728
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
G+ P + F+ + G G D A
Sbjct: 729 GIAPDTITFNALILGHFKSGHLDNA 753
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P D+LV G A ++ +M+ +G P + T+N+LI K G
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGM 854
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G TY IL+ SK E + L ++ E G +P +
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSS 914
Query: 121 IIKGAFRRGQFDDA 134
I + + G +A
Sbjct: 915 ISRAFSKPGMSWEA 928
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + + C K D+
Sbjct: 377 LKPEIGTYTMIIN--EXCKKGDV 397
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ CK GE+
Sbjct: 97 FRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ S+ K G V ++ L+ K G +DE FRL + G +P Y+ +I G
Sbjct: 157 SVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L P
Sbjct: 217 CKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 222 MDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M B G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXG 411
Query: 181 LTP 183
P
Sbjct: 412 YVP 414
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ PN
Sbjct: 387 IINEXCKKGDVWTGSKLLKEMQRXGYVPN 415
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P ++++ L G +E A +++++M P+L T N +++ +CK+ ++E
Sbjct: 116 KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEE 175
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ S + G D TY LI + K G +DEA+RL +++ GHN P +Y +I+
Sbjct: 176 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 235
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F G+ +D F E+ +G P+ + T + + G + ++ G P
Sbjct: 236 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 295
Query: 184 ISRCFDLVTDGLKNCGK 200
R + ++ GL G+
Sbjct: 296 DVRSYSILIHGLTKAGQ 312
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + + + AG +E + + + G PD+ +++ LI + K+G+
Sbjct: 256 RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 315
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++++ + G D Y ++ K+G + +A+ +L + E P + Y I+
Sbjct: 316 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 375
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + D+A+ F E K KG N +Y++LI G+ GR EA L EM + GLTP
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 435
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ + D L AE+I + V +S+
Sbjct: 436 NVYTWNSLLDALVK------AEEINEALVCFQSM 463
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 39/232 (16%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV--- 61
GF P VR +L+ GL AG + + M +QG D +N++++ CKSG+V
Sbjct: 292 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 351
Query: 62 --------EFCVEMYYSVCKLGSCAD--------------------------VSTYKILI 87
E CV+ +V G+ D V Y LI
Sbjct: 352 YEILEEMKEKCVQP--TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 409
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
K G IDEA+ +L +++ G P + ++ + + ++A F +K P
Sbjct: 410 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCP 469
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
PN Y+ LI R ++ +A + +M + GL P + + GL G
Sbjct: 470 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 521
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + +++V L A LE A ++ ++G +PD T+ SLI+ + K G+
Sbjct: 148 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 207
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G A+ Y LI G ++ ++ L+ G P +L
Sbjct: 208 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 267
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F +I+ G P+ Y+ LI + G+ E +N M + G
Sbjct: 268 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 327
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQLE 211
+R ++ V DG GK H E +E+++
Sbjct: 328 FALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + +++ QG PD ++ S+I +CK+G + E++ + S Y +I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
AG ++A++LL L E G P + I+ ++ + D+A F E+ K P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
N Y +I M GGR EA L EM L P +++ D L K + A KI
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 36/211 (17%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ G +AG E A +++ ++ ++G P + +FNS++ + K +V+ + +
Sbjct: 51 PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSL 110
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH--------------NLVED---- 109
+ V K + + STY I+I + G ++EA+R+L N++ D
Sbjct: 111 -FEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 169
Query: 110 -----------------GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G NP Y +I G ++GQ D+A+ F ++ GH N V
Sbjct: 170 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 229
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
YT+LI GR + E+ G P
Sbjct: 230 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKP 260
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S +G NP L+ GL G ++ A ++ KM+ G + + + SLI G
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E +++ + + G D++ + V KAG +++ + ++ G P Y+ +
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + GQ + F +K +G + Y ++ + G+ +A L EM E +
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL + D A
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEA 386
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ GF P + L+ G NAG + A ++ M ++G +P+ + LI+ +CK
Sbjct: 254 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ + + ADV TY L+ K G ID+ + +L ++++ G P Y
Sbjct: 314 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ F++ +++ + P+ +Y +I + + G EA EM E G
Sbjct: 374 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 433
Query: 181 LTPISRCFDLVTDGLKNCG 199
L+P F ++ +GL + G
Sbjct: 434 LSPGVDTFVIMINGLASQG 452
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 87/193 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P +L+Q L +E A ++ +M + + D+ T+ +L+ CK G+
Sbjct: 289 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C + + K G TY ++ A K +E L+ + + ++P +Y
Sbjct: 349 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ A + G+ +A ++E++ G P + +I G +EA+++ EM +
Sbjct: 409 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMLLLN 468
Query: 181 LTPISRCFDLVTD 193
+ ++ D
Sbjct: 469 TVLKDKKLEMAKD 481
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 18/188 (9%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LVQ +A ++ A +++++M K G +PD F L++ +CK G V+
Sbjct: 181 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVK------------ 228
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
K+ + G + EA +L + E G P Y ++ G G+ DA
Sbjct: 229 ------DAAKLFEDMRMRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 282
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ +++ +G PN YT LI + R EA +EM + + G
Sbjct: 283 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 342
Query: 195 LKNCGKHD 202
GK D
Sbjct: 343 FCKWGKID 350
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+L+ + A M+ +A +L + + G P ++ ++ + G DA F +++++
Sbjct: 181 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR 240
Query: 145 -----------------GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G P+ YT L++ G+ +A + L +M G P + C
Sbjct: 241 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 300
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ ++ L + + A K+
Sbjct: 301 YTVLIQALCKVDRMEEAMKV 320
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V +++ GL + G L A +M+ L+ T+ K +
Sbjct: 429 MEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEML-------------LLNTVLKDKK 475
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E +++ + G+C +V ++ I I A+ G EA ++E P P +A
Sbjct: 476 LEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFA 535
Query: 120 PIIKG 124
++KG
Sbjct: 536 KLMKG 540
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + + L GL L+ AK +++ MI+ G P+ T+ +LI CK G+
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGD 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G+ V TY ++I +K G I EA R + + G P YA
Sbjct: 438 MVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYAS 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D A F E+K +G PN YT LI+ + GR A +M + G
Sbjct: 498 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 557
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + L + D+
Sbjct: 558 LIPDDSLYSALVGSLHTDNRKDV 580
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P R +L+ G G +E+A+ ++ M QG + FN++I+ C+ G V+
Sbjct: 312 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDA 371
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ ++ K+G D+ TY L + + +DEA LLH ++E G P Y +I
Sbjct: 372 LKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISI 431
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G +A F E+ KG P+ Y +I + G EA + EM + G P
Sbjct: 432 HCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPD 491
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + G GK D+A K+
Sbjct: 492 VYTYASLVHGHCVNGKVDVALKL 514
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ ++ G G ++ A ++ M K G + D+ T+N+L +C+ ++ + + + +
Sbjct: 356 NTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 415
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+G + TY LI K G + EA RL + E G P Y +I G ++G +
Sbjct: 416 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIRE 475
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E++ KG P+ Y +L+ G+ A EM + G P + +
Sbjct: 476 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 535
Query: 194 GLKNCGKHDLA 204
GL G+ + A
Sbjct: 536 GLAKEGRSEAA 546
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 91/244 (37%), Gaps = 35/244 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G V +LV L A + + + N+M D+ + ++I C++G
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ G + TY +LI K G ++ A LL ++ G ++
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 121 IIKGAFRRGQFDDAFCF----------------------------FSEIKIKGH------ 146
+I G R+G DDA E K H
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 147 -PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN YTTLI++ + G VEA EM E G TP ++++ DG G AE
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477
Query: 206 KIEQ 209
+ +
Sbjct: 478 RFRK 481
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 84/185 (45%)
Query: 30 KQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPA 89
++++ M +G + + T+ L++++ + ++ ++ + DV Y +I A
Sbjct: 232 QEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINA 291
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+AG + A ++L V +G P Y +I G + GQ + A ++++ +G N
Sbjct: 292 YCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLN 351
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ ++ T+I R G +A M +MG+ ++ + GL + D A+ +
Sbjct: 352 QIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLH 411
Query: 210 LEVSL 214
+ + +
Sbjct: 412 IMIEM 416
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ +M+ +G P+ TF +LI+ CK+G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGK 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L++ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P S + ++ + C K D+
Sbjct: 377 LKPDSGTYTMIINEF--CKKGDV 397
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 2/213 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +++
Sbjct: 166 GLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEA 225
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ + G + T+ LI K G +D A + ++ +P Y +I G
Sbjct: 226 NELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++G A +E+ +KG P++ YTTLI + G A Y M E +
Sbjct: 286 LCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLD 345
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + GL G+ AEK+ E L V L+
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + ++ + + + K G P + +FN+L+ + G+++ + ++
Sbjct: 140 NILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +DEA L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A N + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G +C DL E
Sbjct: 320 G--SCKDGDLETAFE 332
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D TY LI K G ++ AF ++E+ Y
Sbjct: 292 LKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 HVP 414
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + ++++ G L FN L+ CK GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ + G +D+ FRL + G P Y+ +I G
Sbjct: 157 SVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + D+A F E+ KG PN +TTLI + G+ A +M L+P
Sbjct: 217 CKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++N+M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ GH P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGHVPS 415
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I + + + + G P + ++ G R+G D F
Sbjct: 132 YPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + EA EM + GL P F + DG
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
GK DLA +I
Sbjct: 252 CKNGKVDLAMEI 263
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P L++GL + + +++ +M+++ P+ TF+ LI C+ G VE
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 302
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G + + I+I ++ K G +D+AF+LL+++ G NP Y ++KG
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R ++DDA +E+ PPN + T I + + G +A + +M+E G T
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
++ + +G G D A
Sbjct: 423 VVTYNALVNGFCVQGHIDSA 442
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++LV G+LE A ++V +M++ G P+L T+N+L++ I K E +E+
Sbjct: 488 PNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALEL 547
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV T+ +I +SK I+EA +L H + + G P +Y I+ G +
Sbjct: 548 LHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCK 607
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
R + D+A FF+ + G PN Y LI G EA + L + G+
Sbjct: 608 RCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L + G + A +++ M+++G P++ T+ L+E +C++ E + + + G
Sbjct: 149 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG 208
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY ++I + + G +D+A LL+ L G P Y ++KG ++DD
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVE 268
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ K PN + LI RGG A L +MTE G + ++V + +
Sbjct: 269 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSI 328
Query: 196 KNCGKHDLAEKI 207
G+ D A K+
Sbjct: 329 CKQGRVDDAFKL 340
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP +++GL A + AK+++N+M++ P+ TFN+ I +C+ G
Sbjct: 344 MGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGL 403
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G V TY L+ G ID A L ++ P Y
Sbjct: 404 IEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTT 460
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + D A +E+ PPN + L++ + G EA + +M E G
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
TP ++ + DG+ K+C D E + L
Sbjct: 521 CTPNLITYNTLLDGITKDCSSEDALELLHGL 551
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 92/189 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++++ G+ G ++ A++++N++ G PD ++ +L++ +C S
Sbjct: 204 MRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKR 263
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + + T+ +LI + GM++ A ++L + E G +L
Sbjct: 264 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNI 323
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ DDAF +++ G P+ YTT++ R R+ +A L EM
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383
Query: 181 LTPISRCFD 189
P F+
Sbjct: 384 CPPNEVTFN 392
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL NA L+ A ++V +M++ P++ TFN L+ C+ G +E +E+ + + G
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY L+ ++K ++A LLH LV G +P ++ II + + ++A
Sbjct: 521 CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAV 580
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ G P VY ++ + A ++ M G P + ++ +GL
Sbjct: 581 QLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGL 640
Query: 196 KNCG 199
+ G
Sbjct: 641 AHEG 644
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV G G+L++A++++ M PD T+ LI +C G V + + + +
Sbjct: 115 NTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR 171
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +V TY +L+ A+ + ++A +L + G P Y II G R G+ DD
Sbjct: 172 RGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 231
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A + + G P+ YTTL+ R+ + EM E P FD++
Sbjct: 232 ARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G PD+ LI +C+ G + + GS DV Y L+ + G +D A
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
RL+ ++ P Y P+I+ RG+ DA ++ +G PN YT L+
Sbjct: 131 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R F +A L EM G TP ++++ +G+ G+ D A ++
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL 235
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G V + LV G G+++SA ++ M P+ T+ +L+ +C +
Sbjct: 414 MSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER 470
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + + +V T+ +L+ + G ++EA L+ ++E G P Y
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + +DA + KG P+ ++++I + + R EA + ++G
Sbjct: 531 LLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIG 590
Query: 181 LTPISRCFDLVTDGL-KNC 198
+ P + ++ + GL K C
Sbjct: 591 MRPKAVVYNKILLGLCKRC 609
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G+ E A ++++ ++ +G PD+ TF+S+I + K
Sbjct: 516 MMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDR 575
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V++++ V +G Y ++ + K ID A +V +G P S Y
Sbjct: 576 IEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYII 635
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G G +A S + +G
Sbjct: 636 LIEGLAHEGLLKEAQDLLSVLCSRG 660
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + +L+ L G + AK+++ MI++G P+L T+NSLI+ C G+
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ S+ G D +Y LI K + EA L + +++ G +P + Y
Sbjct: 358 LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT 417
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG F++G+ DA F +K G N +Y + + EA E+
Sbjct: 418 LLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQ 209
+ + DGL GK +L EK+ Q
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQ 510
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G AG + +K + ++M+ QG PD+ TF+ LI+T+CK G+
Sbjct: 263 MKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGK 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + + G ++ TY LI G ++ A L ++ G P Y
Sbjct: 323 VTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTT 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A ++E+ G PN Y TL+ + G+ +A M G
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
++ S+ + + DGL C L E +E
Sbjct: 443 VSANSQIYGIFLDGL--CKNDCLFEAME 468
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 2 SDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
S G N P V +++ GL G + AK++ +M QG PD+ ++++LI C +G
Sbjct: 227 SQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAG 286
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ + ++ + G D+ T+ +LI + K G + EA +LL +++ G P Y
Sbjct: 287 KWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYN 346
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G G + A F + KG P+ YTTLI + + EA N EM ++
Sbjct: 347 SLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 406
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P + + GL GK A+K+
Sbjct: 407 GKSPNVTTYGTLLKGLFQKGKVGDAKKL 434
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 8/221 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + +L L N + A + ++++G P++ T+ +LI+ +C
Sbjct: 117 MRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHR 176
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED----GHNPFPS 116
+ ++ + KLG + TY LI + + G ++ A +L ++ D G N P
Sbjct: 177 ISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPG 236
Query: 117 L--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+ Y+ II G + G+ D+A F E+K +G P+ Y+TLI G++ ++ +
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
EM + G+ P F ++ D L GK A+K+ LEV ++
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL--LEVMIQ 335
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P V L++GL + A ++ +M K G P+ T+ +LI+ +C++G V
Sbjct: 155 RGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNI 214
Query: 64 CVEMY---------YSV-CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
++++ Y V CK G V TY I+I + K G DEA L + G P
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPG----VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270
Query: 114 FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
Y+ +I G G++D + F E+ +G P+ ++ LI + G+ EA L
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLL 330
Query: 174 MEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M + G+ P ++ + DG G + A ++
Sbjct: 331 EVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ G G L SA+++ M +G +PD ++ +LI CK+ +
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWK 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + +Y + ++G +V+TY L+ + + G + +A +L + G + +Y
Sbjct: 393 VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGI 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + +A F+E+K N Y+ LI + G+ A ++++ G
Sbjct: 453 FLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEG 512
Query: 181 LTPISRCFDLVTDGLKNCGKHD----LAEKIEQ 209
L P ++++ G G+ D L EK+E+
Sbjct: 513 LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEE 545
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L++GL G + AK++ M G + + + ++ +CK+
Sbjct: 403 MLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDC 462
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + ++ Y LI + KAG ++ A+ L L ++G P Y
Sbjct: 463 LFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNI 522
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + GQ D+A F +++ G P+ Y TL+ G + E L +M +
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582
Query: 181 LTPISRCFDLVTDGL 195
++P + +V D L
Sbjct: 583 VSPNAASCTIVVDML 597
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+ + GL L A ++ N++ ++E ++ LI+ +CK+G++E E++ + +
Sbjct: 452 IFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE 511
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G DV TY I+I K G +D A L + E+G P Y ++ G + ++
Sbjct: 512 GLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEV 571
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
++ K PN T ++ M + ++ + + L
Sbjct: 572 IKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 6/178 (3%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M++ P + +FN L+ + K +Y + G D+ T IL +
Sbjct: 82 MMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+ EA + ++ G+ P Y +IKG + +A F ++ G PN Y T
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201
Query: 156 LITMCGRGGRFVEAANYLMEM----TEMGLT--PISRCFDLVTDGLKNCGKHDLAEKI 207
LI + G A EM ++ G+ P + ++ DGL G+ D A+++
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKEL 259
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G P V ++++ G G +++A + KM + G PD+ +N+L+ C+ +
Sbjct: 508 LSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNK 567
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+E +++ + + + + ++ I++ + K DE ++ +L+
Sbjct: 568 LEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK----DEKYKKFVDLL 610
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +++++G AG L+ A + M + PD T+ +LI+ + + C+ +
Sbjct: 253 PDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSL 312
Query: 68 Y--------------YS-----VCKLGSC----------------ADVSTYKILIPAVSK 92
Y YS +CK C A+V+ Y LI + SK
Sbjct: 313 YLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSK 372
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G ++EA RL + +G P Y+ ++ G + G+ DD F + KG N
Sbjct: 373 NGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMF 432
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y +LI G+ GR +A N EM+E G S C++ + D L GK D A
Sbjct: 433 YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQA 484
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + + LV GL+N+ ++ESA+++ M PD T+N +I+ CK+G+
Sbjct: 211 MKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGK 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + + D TY LI A D L + E G P Y+
Sbjct: 271 LQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ + +A+ F + KG N +YT LI + G EA M G
Sbjct: 331 VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEG 390
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
P + + ++ +GL G+ D
Sbjct: 391 FEPDAVTYSVLVNGLCKSGRLD 412
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG V L+ G +E A ++ +M +G +PD T++ L+ +CKSG
Sbjct: 351 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 410
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ G + Y LI + KAG I++A L + E G Y
Sbjct: 411 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNA 470
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ D A F ++ +G +T LI + + EA + +M + G
Sbjct: 471 IIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG 530
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+TP F + GL CGK A KI
Sbjct: 531 ITPTVASFRALAIGLCLCGKVARACKI 557
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF P +LV GL +G L+ ++ + +G + + SLI+ + K+G
Sbjct: 386 MKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGR 445
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G D Y +I A++K G ID+A L + E+G + +
Sbjct: 446 IEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTI 505
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL---ITMCGRGGRFVEAANYLMEMT 177
+I G F+ + ++A F+ ++ KG P + L + +CG+ R A L ++
Sbjct: 506 LIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVAR---ACKILDDLA 562
Query: 178 EMGLTPISRCFDLVT 192
MG+ P + D++
Sbjct: 563 PMGIIPETAFEDMIN 577
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L++ GL A + M ++G ++ + +LI++ K+G
Sbjct: 316 MEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + G D TY +L+ + K+G +D+ L G YA
Sbjct: 376 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +DA F E+ KG + Y +I + G+ +A M E G
Sbjct: 436 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 495
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
F ++ DGL K++ A K
Sbjct: 496 CDQTVYTFTILIDGLFKEHKNEEAIK 521
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG +E A+ + +M ++G D +N++I+ + K G+++ + ++ + + G
Sbjct: 436 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 495
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V T+ ILI + K +EA + +++ G P + + + G G+ A
Sbjct: 496 CDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARAC 555
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G P + T+C + R EA + + G R ++ + L
Sbjct: 556 KILDDLAPMGIIPETAFEDMINTLC-KAQRIKEACKLADGIVDRGREIPGRIRTVLINAL 614
Query: 196 KNCGKHDLAEKIEQLEVSL 214
+ G DL K+ ++ +
Sbjct: 615 RKAGNSDLVIKLMHSKIGI 633
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
NSLI++ G VE + ++ + + G + TY L+ + + I+ A ++ V
Sbjct: 189 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFE--VM 246
Query: 109 DGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
DG P Y +IKG + G+ A F ++++K P++ Y TLI C F
Sbjct: 247 DGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDF 306
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +EM E GL + LV GL
Sbjct: 307 DTCLSLYLEMEERGLEIPPHSYSLVIGGL 335
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V L GL G + A ++++ + G P+ F +I T+CK+
Sbjct: 526 MIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE-TAFEDMINTLCKAQR 584
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ ++ + G +LI A+ KAG D +L+H+ + G++ S+
Sbjct: 585 IKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSI 641
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 10/214 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ + G +E A + M + G PD T+N+L++ ++
Sbjct: 171 MRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADR 230
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + G+ DV Y ILI A +AG A ++ + E G P ++
Sbjct: 231 HEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFST 290
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ + G +D+ F+++K +G P+ Y TLI + G+GG F E+ N ++ + G
Sbjct: 291 LLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGG 350
Query: 181 LTPISRCFDLVTDG--LKNCGK---HDLAEKIEQ 209
+ P D+ T L +CGK H A+KI +
Sbjct: 351 VEP-----DMSTYAGLLYSCGKGGLHKAAKKIHR 379
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P G L+ NA A N M + G PDLET+N+LI G
Sbjct: 388 PTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSA 447
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
Y ++ G ADVSTY LI A + G+ D+A ++ E +P Y ++
Sbjct: 448 YLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCT 507
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G FD+A F ++++ G P+ Y L+++C R R+ +A+ L EM E + I
Sbjct: 508 AGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSI 564
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P + LV A E +++ +M + G+ PD+ +N LIE ++G+
Sbjct: 206 MNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGK 265
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M+ + + G DV T+ L+ A K G DE L ++ E G P + Y
Sbjct: 266 YRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNT 325
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + G F ++ F ++ G P+ Y L+ CG+GG A M +
Sbjct: 326 LIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSY 385
Query: 181 LTPISRCF 188
+TP + F
Sbjct: 386 VTPTTDGF 393
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 91/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V L++ G + + + M ++G++PD+ T+N+LI+ + G
Sbjct: 276 MQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGF 335
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D+STY L+ + K G+ A ++ ++++ P +
Sbjct: 336 FQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTG 395
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + +A F+ +K G P+ Y LI GG + EA + + M + G
Sbjct: 396 LITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEG 455
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++ ++ + + G D A
Sbjct: 456 ISADVSTYNSLIEAFGRGGLFDDA 479
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 2/217 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P + L+ G ++AK++ M++ P + F LI +
Sbjct: 348 DGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYS 407
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ S+ + G D+ TY LI A + G+ EA ++++G + S Y +I
Sbjct: 408 EATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLI 467
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ R G FDDA F +++ PNR Y L+ + G F EA +++ G
Sbjct: 468 EAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGEL 527
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLRSV 217
P + L+ + D A K+ E LE ++ S+
Sbjct: 528 PSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSI 564
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 78/185 (42%), Gaps = 1/185 (0%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L+ A ++ M + ++ +F +LI ++G+ E + + + + ++ TY
Sbjct: 88 GMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITY 147
Query: 84 KILIPAVSKAGMIDEA-FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+I A +K G+ E L + +G P Y ++ RG ++A F +
Sbjct: 148 NTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMN 207
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
G P+ Y L+ + G+ R L EM + G P ++++ + GK+
Sbjct: 208 EAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYR 267
Query: 203 LAEKI 207
A K+
Sbjct: 268 AAAKM 272
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M + G P + + L+ G A MI +G D+ T+NSLIE + G
Sbjct: 416 MKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGL 475
Query: 60 ---EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+EF +M + C + TY+ L+ AG+ DEA +L G P
Sbjct: 476 FDDAIEFSRDMEEARCS----PNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVD 531
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
Y ++ RR ++DDA E+ PN P
Sbjct: 532 SYCLLLSVCARRNRWDDASKVLEEML----EPNMP 562
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 68/163 (41%), Gaps = 11/163 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + V + L++ G + A + M + P+ T+ +L+ C +G
Sbjct: 451 MIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGL 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G V +Y +L+ ++ D+A ++L ++E PS+Y
Sbjct: 511 FDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPN---MPSIYGV 567
Query: 121 IIKGAFRRGQFDDAFCF------FSEIKIKGHPPNRPVYTTLI 157
+ G +G+ DD + F +K+ G N Y L+
Sbjct: 568 V--GGILKGEMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALL 608
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 8/127 (6%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y I+I + + GM+D+A L ++ + + +I R GQ + + + +K
Sbjct: 77 YTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMK 136
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEA-ANYLMEMTEMGLTPISRCFDLVTDG--LKNCG 199
+ PN Y T+I C +GG E +M G+ P D++T L C
Sbjct: 137 REKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQP-----DIITYNTLLSACS 191
Query: 200 KHDLAEK 206
L E+
Sbjct: 192 SRGLVEE 198
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ GF P + L+ G NAG + A ++ M ++G +P+ + LI+ +CK
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ + + ADV TY L+ K G ID+ + +L ++++ G P Y
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ F++ +++ + P+ +Y +I + + G EA EM E G
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 181 LTPISRCFDLVTDGLKNCG 199
L+P F ++ +GL + G
Sbjct: 458 LSPGVDTFVIMINGLASQG 476
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P +L+Q L +E A ++ +M + + D+ T+ +L+ CK G+
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C + + K G TY ++ A K +E L+ + + ++P +Y
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ A + G+ +A ++E++ G P + +I G +EA+++ EM G
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Query: 181 LTPISR 186
L +S+
Sbjct: 493 LFSVSQ 498
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LVQ +A ++ A +++++M K G +PD F L++ +CK G V+ +++ + ++
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RM 246
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
++ + L+ + G + EA +L + E G P Y ++ G G+ DA
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ +++ +G PN YT LI + R EA +EM + + G
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 195 LKNCGKHD 202
GK D
Sbjct: 367 FCKWGKID 374
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 32 MVNKMIKQGSDPDL---ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
++ +M K+ +P L E F L++ + V+ +E+ + K G D + L+
Sbjct: 169 LIEEMRKE--NPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLD 226
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFP---SLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
A+ K G + +A +L ED FP + ++ G R G+ +A ++ G
Sbjct: 227 ALCKHGSVKDAAKLF----EDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ YT L++ G+ +A + L +M G P + C+ ++ L + + A
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 206 KI 207
K+
Sbjct: 343 KV 344
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG--SDPDLETFNSLIETICKS 58
M + G +P V +++ GL + G L A +M+ +G S T L+ T+ K
Sbjct: 453 MEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKD 512
Query: 59 GEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++E +++ + G+C +V ++ I I A+ G EA ++E P P
Sbjct: 513 KKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDT 572
Query: 118 YAPIIKG 124
+A ++KG
Sbjct: 573 FAKLMKG 579
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + + L GL L+ AK +++ MI+ G P+ T+ +LI CK G+
Sbjct: 169 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGD 228
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G+ V TY ++I +K G I EA R + + G P YA
Sbjct: 229 MVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYAS 288
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D A F E+K +G PN YT LI+ + GR A +M + G
Sbjct: 289 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 348
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + L + D+
Sbjct: 349 LIPDDSLYSALVGSLHTDNRKDV 371
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P R +L+ G G +E+A+ ++ M QG + FN++I+ C+ G V+
Sbjct: 103 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDA 162
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ ++ K+G D+ TY L + + +DEA LLH ++E G P Y +I
Sbjct: 163 LKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISI 222
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G +A F E+ KG P+ Y +I + G EA + EM + G P
Sbjct: 223 HCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPD 282
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + G GK D+A K+
Sbjct: 283 VYTYASLVHGHCVNGKVDVALKL 305
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ ++ G G ++ A ++ M K G + D+ T+N+L +C+ ++ + + + +
Sbjct: 147 NTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 206
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+G + TY LI K G + EA RL + E G P Y +I G ++G +
Sbjct: 207 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIRE 266
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E++ KG P+ Y +L+ G+ A EM + G P + +
Sbjct: 267 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 326
Query: 194 GLKNCGKHDLA 204
GL G+ + A
Sbjct: 327 GLAKEGRSEAA 337
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS---GEVEFCVEMYYSV 71
++V GL +G ++ A+++++ M + G + +NSL++ + G V+ +E+ +
Sbjct: 19 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENE 78
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
I A G ++L V +G P Y +I G + GQ
Sbjct: 79 G--------------IEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQM 124
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+ A ++++ +G N+ ++ T+I R G +A M +MG+ ++ +
Sbjct: 125 EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTL 184
Query: 192 TDGLKNCGKHDLAEKIEQLEVSLRSV 217
GL + D A+ + + + + V
Sbjct: 185 ACGLCRVNRLDEAKTLLHIMIEMGVV 210
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ G G + A ++ ++M+ +G +PD+ TF L+ CK+G
Sbjct: 800 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGH 859
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G +V TY LI + K G +D A LLH + + G P Y
Sbjct: 860 IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G ++A E + G + YTTL+ + G +A L EM G
Sbjct: 920 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F+++ +G G + EK+
Sbjct: 980 LQPTIVTFNVLMNGFCLHGMLEDGEKL 1006
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++ L L A++ ++MI QG PD + +L++ CK G+
Sbjct: 730 MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + DV TY +I + G + EA +L H ++ G P +
Sbjct: 790 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G DAF + + G PN YTTLI + G A L EM ++G
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + +GL G + A K+
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKL 936
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ GL G L+SA +++++M K G P++ T+NS++ +CKSG
Sbjct: 870 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 929
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V++ G AD TY L+ A K+G +D+A +L ++ G P +
Sbjct: 930 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV 989
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + + KG PN + L+ C R A Y +M
Sbjct: 990 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIY-KDMCSR 1048
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P + ++ + G +C ++ E
Sbjct: 1049 GVEPDGKTYENLVKG--HCNARNMKE 1072
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + L+ G AG+++ A ++ N MI+ G P++ T+ +LI+ +CK G+++
Sbjct: 838 RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 897
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + + K+G ++ TY ++ + K+G I+EA +L+ G N Y ++
Sbjct: 898 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ D A +E+ KG P + L+ G + L M G+ P
Sbjct: 958 AYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1017
Query: 184 ISRCFD 189
+ F+
Sbjct: 1018 NATTFN 1023
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-GEV 61
D G +P R D+ Q L+ G L A+++ KM+ G +++ N + + K +
Sbjct: 593 DWGSDP--RVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKT 650
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ ++ ++G C +V++Y I+I V + G I+EA LL + G+ P Y+ +
Sbjct: 651 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTV 710
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G R G+ D + ++K KG PN Y ++I + R + EA EM G+
Sbjct: 711 INGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770
Query: 182 TPISRCFDLVTDGLKNCGKHDL 203
P + + + DG C + D+
Sbjct: 771 LPDTIVYTTLVDGF--CKRGDI 790
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P LV G G + +A + +M + PD+ T+ ++I C+ G+
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + G D+ T+ L+ KAG I +AFR+ +++++ G +P Y
Sbjct: 825 MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D A E+ G PN Y +++ + G EA + E G
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + + + D G+ D A++I
Sbjct: 945 LNADTVTYTTLMDAYCKSGEMDKAQEI 971
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ G G LE ++++N M+ +G P+ TFN L++ C
Sbjct: 975 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y +C G D TY+ L+ A + EA+ L + G + S Y+
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094
Query: 121 IIKGAFRRGQFDDA------------------FCFFSEIKIKGHPPNRPV 152
+IKG F+R +F +A F FFS+ K KG P+ V
Sbjct: 1095 LIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIV 1144
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 35/228 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + +V GL +G +E A ++V + G + D T+ +L++ CKSGE
Sbjct: 905 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 964
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---- 116
++ E+ + G + T+ +L+ GM+++ +LL+ ++ G P +
Sbjct: 965 MDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNC 1024
Query: 117 -------------------------------LYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
Y ++KG +A+ F E+K KG
Sbjct: 1025 LVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKG 1084
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+ Y+ LI + +FVEA +M GL FD +D
Sbjct: 1085 FSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSD 1132
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V ++++ + G + A ++ M +G PD+ +++++I C+ GE++ ++
Sbjct: 669 VASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIE 728
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ + G + TY +I + + + EA ++ G P +Y ++ G +RG
Sbjct: 729 KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRG 788
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
A FF E+ + P+ YT +I+ + G VEA EM GL P F
Sbjct: 789 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848
Query: 190 LVTDGLKNCG 199
+ +G G
Sbjct: 849 ELMNGYCKAG 858
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P + LV G G A + ++M++ G PD+ T+ SLI T+CK+G
Sbjct: 299 MDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGN 358
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + + G + TY LI S+ G +DEA+R+ ++ G P Y
Sbjct: 359 LNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNA 418
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ ++A ++ KG P+ Y+T+I R A EM E G
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
++P + + + GL C + L E
Sbjct: 479 VSPDAITYSSLIQGL--CEQRRLNE 501
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 101/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G+++ A ++ ++MI+ G P + T+N+L+ C SG
Sbjct: 369 MHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G DV +Y +I + +D AF++ +VE G +P Y+
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + + ++A F E+ K P+ YT+LI + G EA N EM + G
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++++ +GL + A+++
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRL 575
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++++ GL G +E ++ +M ++G PD T+N+L+ CK G
Sbjct: 264 MGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGN 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G DV TY LI + KAG ++ A + G P Y
Sbjct: 324 FHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G D+A+ + E+ G PP Y L+ GR EA L M G
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 181 LTPISRCFDLVTDGL 195
L+P + + G
Sbjct: 444 LSPDVVSYSTIIAGF 458
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + V ++L++G AG LE + +M + P++ T+N++I CK
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ S+ G ++ TY ++I + + G I+E +L + G P Y
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G F A SE+ G PP+ YT+LI + G A + +M G
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + +G G D A +I
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRI 400
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 23/233 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P L+QGL L A + +M+ + PD T+ SLI CK G+
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGD 533
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
+ + ++ + K G D TY +LI ++K EA RLL L D P
Sbjct: 534 LNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDT 593
Query: 114 ---------FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
F S+ A +IKG +G ++A F + + PN VY +I R G
Sbjct: 594 LIESCSDIEFKSVVA-LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDG 652
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+A EM + G P + + L + G EQL + +R +
Sbjct: 653 NVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMD------EQLNLVIRDI 699
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A +++ M +G +P+L T+N +I +C+ G +E + + + G D TY
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ K G +A L ++ +G P Y +I + G + A FF ++ ++G
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
PN YT+LI + G EA EM G P ++ + +G
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNG 422
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A+++ +MI G ++ ++N LI C +G +E + + + + +V TY +I
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A K IDEAF+LL ++ +G P Y +I G R G+ ++ +E+ KG P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+ Y TL+ + G F +A EM GL P D+VT
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP-----DVVT 345
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + + L+ G +G +E A ++ M +G PD+ +++++I C+ E
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M + + G D TY LI + + ++EA L ++ P Y
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTS 523
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + G ++A E+ KG P+ Y LI + R EA L+++
Sbjct: 524 LINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKL 579
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 1/182 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE-VEFCVEMYYSVC 72
DL+V+ ++E A +V+ G P + ++N+++++I + + V F ++Y +
Sbjct: 136 DLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMI 195
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G +V +Y ILI AG ++ R + + P Y +I + + D
Sbjct: 196 ASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRID 255
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+AF + ++G PN Y +I R GR E + L EM G P ++ +
Sbjct: 256 EAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLV 315
Query: 193 DG 194
+G
Sbjct: 316 NG 317
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 56/134 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G G + A Q+ MIK+ P+ +N +I C+ G V ++Y + G
Sbjct: 609 LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG 668
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
T L+ A+ GM ++ ++ +++ L +++ + G D F
Sbjct: 669 FIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVF 728
Query: 136 CFFSEIKIKGHPPN 149
+E+ G P+
Sbjct: 729 NLLTEMAKDGFLPS 742
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 32/235 (13%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +++QGL +G L+ A +++ +M + G PD +N +I +CK+
Sbjct: 54 GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 65 VEMYYS----------------VCKL----------------GSCADVSTYKILIPAVSK 92
++ + S +CK G+ + TY +LI K
Sbjct: 114 LDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
+ A+ LL + E G P Y+ +I G R+ + D A+ F ++ G PN
Sbjct: 174 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y TL++ R G EA L EM E GL P +D + GL GK D+A K+
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 288
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G + A ++ +M + G P++ T++++I C+ +
Sbjct: 152 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTK 211
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + G ++ TY L+ + + G++DEA+ LL + E G P Y
Sbjct: 212 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 271
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D A F + PP+ Y+TLI + GR EA +M E
Sbjct: 272 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENS 331
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P F + DGL C L E + LE
Sbjct: 332 CEPDVVTFTALMDGL--CKGDRLQEAQQVLET 361
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + + L+ GL G A ++ M + +PD+ T++ LI CK
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K DV T+ L+ AG++D+A RLL +V +P Y
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A + +G PN YT LI R G+ A L EM G
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + + G CG DL E + LE
Sbjct: 612 VQPNVITYRSLIGGF--CGTGDLEEARKILE 640
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ G +++A ++ +M++ G P+L T+N+L+ +C++G
Sbjct: 187 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 246
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + + G D +Y L+ + K G ID A ++ + P Y+
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A F +++ P+ +T L+ +G R EA L M +
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
TP + + DGL G+ A+++
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEV 393
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P V L+ GL G + A+++ +MI +G +P++ T+NSLI C +
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D+ TY LI + K G EA RL ++ NP Y+
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F ++ + P+ ++TL+ G +A L EM
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P + + DG G+ A ++
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRV 568
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 6/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P D L+ GL G ++ A ++ PD+ +++LI +CK+G
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ +++ + + SC DV T+ L+ + K + EA ++L + + P Y+
Sbjct: 317 LDEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLM-EMT 177
+I G + GQ DA F + ++G PN Y +LI C G V++A LM EMT
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG--VDSALLLMEEMT 433
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++ + DGL G+ A ++
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRL 463
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL A L A KM K+G+ P+ T+N LI CK +V + + +
Sbjct: 131 IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 190
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY +I + +D A++L +VE+G P Y ++ G R G D+A
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 250
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ E++ +G P++ Y TL+ + G+ A + + P + + G
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 310
Query: 195 LKNCGKHDLAEKI 207
L G+ D A K+
Sbjct: 311 LCKAGRLDEACKL 323
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V LV G G + A++++ +M K+G P++ T+ +LI+ C++G+
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYR 602
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL-YAPIIKGA 125
+ + G +V TY+ LI G ++EA ++L L D + Y ++ G
Sbjct: 603 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGL 662
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EMGLTPI 184
R G+ A IK G PP +Y LI +G +A L EMT P
Sbjct: 663 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 722
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ V L G+H+ A +
Sbjct: 723 AEAYEAVIQELAREGRHEEANAL 745
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L+ GL L+ A+Q++ M + P++ T++SLI+ +CK+G+
Sbjct: 327 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + G +V TY LI +D A L+ + G P Y
Sbjct: 387 VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F ++K K P+ Y+ LI + R A +M +
Sbjct: 447 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 506
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + +G N G D AE++
Sbjct: 507 VLPDVVTFSTLVEGYCNAGLVDDAERL 533
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL AG L+ A ++ KM + +PD+ TF +L++ +CK ++ ++
Sbjct: 299 PDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 358
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ +V TY LI + K G + +A + ++ G P Y +I G
Sbjct: 359 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 418
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
D A E+ G P+ Y TLI + GR EA +M P
Sbjct: 419 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 478
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + G + D+A +
Sbjct: 479 YSCLIGGFCKLERIDMARTL 498
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+ V + L + LL A ++ ++ G P++ T+ +I+ +CKSG+++
Sbjct: 18 QGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDK 77
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + + G D + Y +I A+ KA +A ++ E N + +I
Sbjct: 78 ACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM-ECEKNVIT--WTIMID 134
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + +A +F+++K KG PN Y LI + + A L EM E GL P
Sbjct: 135 GLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAP 194
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ V G K D A K+
Sbjct: 195 NVVTYSTVIHGFCRQTKVDTAYKL 218
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
+QG D ++ T+N L E + ++ ++ + + G +V TY ++I + K+G +D
Sbjct: 17 QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+A LL + E G P ++Y +I + A +F ++ + N +T +I
Sbjct: 77 KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE---KNVITWTIMI 133
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+ R EA Y +M + G P ++++ +G C H +
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGF--CKVHKV 177
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +++++G AG L+ A + M + PD T+ +LI+ + + C+ +
Sbjct: 251 PDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSL 310
Query: 68 Y--------------YS-----VCKLGSC----------------ADVSTYKILIPAVSK 92
Y YS +CK C A+V+ Y LI + SK
Sbjct: 311 YLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSK 370
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G ++EA RL + +G P Y+ ++ G + G+ DD F + KG N
Sbjct: 371 NGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMF 430
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y +LI G+ GR +A N EM+E G S C++ + D L GK D A
Sbjct: 431 YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQA 482
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + + LV GL+N+ ++ESA+++ M PD T+N +I+ CK+G+
Sbjct: 209 MKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGK 268
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + + D TY LI A D L + E G P Y+
Sbjct: 269 LQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL 328
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ + +A+ F + KG N +YT LI + G EA M G
Sbjct: 329 VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEG 388
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
P + + ++ +GL G+ D
Sbjct: 389 FEPDAVTYSVLVNGLCKSGRLD 410
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG V L+ G +E A ++ +M +G +PD T++ L+ +CKSG
Sbjct: 349 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 408
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ G + Y LI + KAG I++A L + E G Y
Sbjct: 409 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNA 468
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ D A F ++ +G +T LI + + EA + +M + G
Sbjct: 469 IIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG 528
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+TP F + GL CGK A KI
Sbjct: 529 ITPTVASFRALAIGLCLCGKVARACKI 555
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF P +LV GL +G L+ ++ + +G + + SLI+ + K+G
Sbjct: 384 MKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGR 443
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G D Y +I A++K G ID+A L + E+G + +
Sbjct: 444 IEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTI 503
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL---ITMCGRGGRFVEAANYLMEMT 177
+I G F+ + ++A F+ ++ KG P + L + +CG+ R A L ++
Sbjct: 504 LIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVAR---ACKILDDLA 560
Query: 178 EMGLTPISRCFDLVT 192
MG+ P + D++
Sbjct: 561 PMGIIPETAFEDMIN 575
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L++ GL A + M ++G ++ + +LI++ K+G
Sbjct: 314 MEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 373
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + G D TY +L+ + K+G +D+ L G YA
Sbjct: 374 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 433
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +DA F E+ KG + Y +I + G+ +A M E G
Sbjct: 434 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 493
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
F ++ DGL K++ A K
Sbjct: 494 CDQTVYTFTILIDGLFKEHKNEEAIK 519
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG +E A+ + +M ++G D +N++I+ + K G+++ + ++ + + G
Sbjct: 434 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 493
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V T+ ILI + K +EA + +++ G P + + + G G+ A
Sbjct: 494 CDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARAC 553
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G P + T+C + R EA + + G R ++ + L
Sbjct: 554 KILDDLAPMGIIPETAFEDMINTLC-KAQRIKEACKLADGIVDRGREIPGRIRTVLINAL 612
Query: 196 KNCGKHDLAEKIEQLEVSL 214
+ G DL K+ ++ +
Sbjct: 613 RKAGNSDLVIKLMHSKIGI 631
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
NSLI++ G VE + ++ + + G + TY L+ + + I+ A ++ V
Sbjct: 187 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFE--VM 244
Query: 109 DGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
DG P Y +IKG + G+ A F ++++K P++ Y TLI C F
Sbjct: 245 DGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDF 304
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +EM E GL + LV GL
Sbjct: 305 DTCLSLYLEMEERGLEIPPHSYSLVIGGL 333
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V L GL G + A ++++ + G P+ F +I T+CK+
Sbjct: 524 MIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE-TAFEDMINTLCKAQR 582
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ ++ + G +LI A+ KAG D +L+H+ + G++ S+
Sbjct: 583 IKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSI 639
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+ G L+ A +M+ +M + G P+++T+N LI + K
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNN 590
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + + DV TY +I + G I A + + +V+ G P Y+
Sbjct: 591 FSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSS 650
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + G+ ++A FSE+K +G P+ Y +I +C G+ A ++L EM G
Sbjct: 651 LIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAG 710
Query: 181 LTPISRCFDLVTDGLKN 197
P + +D++ GL+N
Sbjct: 711 CQPTLQTYDVLIKGLQN 727
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
R R +++ N + A ++ ++G L T+ +L+ + K ++ Y+
Sbjct: 159 RARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQ 218
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ + G ++ Y +I A+ K G + +A +++ + + G P Y +I G R
Sbjct: 219 ILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRD 278
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
D AF F+ + +G PN Y+TLI GR EA +++ EMT G+ P F
Sbjct: 279 LDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTA 338
Query: 191 VTDGLKNCGKHDLAEKI 207
L + G+ + A KI
Sbjct: 339 PIVALCDMGRIEDAWKI 355
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P + L+ L+ ++SA + N M K G P+ ++N LI C G+
Sbjct: 391 MSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGD 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + M ++ K + TY I+I +G D A R+L + +G P Y
Sbjct: 451 TEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTE 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + + A F+E+ +G PN YT LI+ + + AA L M G
Sbjct: 511 LISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSG 570
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++++ GL AE++
Sbjct: 571 CRPNVQTYNVLIHGLTKQNNFSGAEEL 597
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ GL N+G + A +++M + G P + TF + I +C G
Sbjct: 289 MDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGR 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + K G +V TY LI + M A L H + DG P Y
Sbjct: 349 IEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM---AIGLFHRMSRDGVVPNTVTYNA 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + D A F+ + G PN Y LI G +A + L M +
Sbjct: 406 LMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGR 465
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
TP ++++ G + G D+A ++ +L
Sbjct: 466 PTPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + ++ L G + A+ ++NK+ K G PD T+ S+I C++ +++
Sbjct: 222 EGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDS 281
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E++ + + G + +TY LI + +G ++EA + + G P + I
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIV 341
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
G+ +DA+ F ++K KG PN YT+LI+
Sbjct: 342 ALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS 376
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
++++++G P+L +NS+I +CK G V + V K G D TY +I +
Sbjct: 217 HQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRN 276
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
+D AF + + + E+G P + Y+ +I G G+ ++A F SE+ G P +
Sbjct: 277 RDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTF 336
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
T I GR +A ++M + G P
Sbjct: 337 TAPIVALCDMGRIEDAWKIFIDMKKKGCKP 366
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L++G G E A M+ M+K P L T+N +I+ C SG+
Sbjct: 426 MGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGD 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G D +Y LI K ++ A + + +++ G P Y
Sbjct: 486 TDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTA 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A +K G PN Y LI + F A M E
Sbjct: 546 LISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK 605
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++P + V +GL N G LA
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLA 629
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 3/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ G A + ++M + G P+ T+N+L+ + ++ E
Sbjct: 359 MKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENME 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + K G + S+Y LI G ++A +L N+++ P Y
Sbjct: 416 IDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNI 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG G D A +K G P+ YT LI+ + + A+ EM + G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + G K D A ++
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARM 562
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ GL A ++ A +M+ +M K PD T+N LI+ +CKSG+
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 390
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + G DV TY IL+ KAG D A + ++ +P Y
Sbjct: 391 VEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGT 450
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +R Q A +F +K +G PP+ VY++L+ + G+ EM G
Sbjct: 451 LISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 510
Query: 181 L 181
+
Sbjct: 511 V 511
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P ++ +L++ GL +G + +A G D+ T+ ++++ + K+ +++
Sbjct: 123 DYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQ 182
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V + + G ++TY L+ + K G ++EA LL +V++G P Y +I
Sbjct: 183 DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 242
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + +A+ F E+ ++G + YT LI + G+ +A++ MT G
Sbjct: 243 DGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 302
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P + DGL G+ A +I
Sbjct: 303 PDVVTLSTMIDGLCKAGRIGAAVRI 327
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V ++ GL AG + +A ++ M +G P+ +++LI +CK+ +
Sbjct: 296 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +EM + K D TY ILI + K+G ++ A ++E G P Y
Sbjct: 356 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G D A F ++ PN Y TLI+ + + +A+ Y M E G
Sbjct: 416 LVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERG 475
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P S + + DGL GK
Sbjct: 476 CPPDSFVYSSLVDGLCKSGK 495
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P + + L+ GL G LE A ++ K++ G PD+ T+ SLI+ + K
Sbjct: 191 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 250
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + G D Y LI + +AG I +A + + G P +
Sbjct: 251 SFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 310
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F ++ +G PN VY+ LI + + A L +M +
Sbjct: 311 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 370
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
TP + ++++ DGL G + A E LE +
Sbjct: 371 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
DV T+ +LI A +EAF ++ + ED G P + ++ G + G+ A
Sbjct: 93 DVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDH 152
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
F G + YT ++ + + +A + ++T G TP ++ + +GL
Sbjct: 153 FETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK 212
Query: 198 CGKHDLAEKIEQLE 211
G+ L E I+ L
Sbjct: 213 MGR--LEEAIDLLR 224
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P +R ++ L G + A + K +K G PD+ +NSLI CK G+
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++Y + G ++ Y LI + K G + +A L + E P Y+
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G +AF F E+ KG P+ +Y LI CG+ G +A + E +
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ +S F+ + D GK
Sbjct: 797 VGSLS-AFNSLIDSFCKHGK 815
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 3/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L++G + G A M+++G PD+ ++++I ++ K+G+
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ K G DV Y LI K G I++A +L ++ +G NP +Y
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNT 701
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F EI+ K P+ Y+T+I + G EA EM G
Sbjct: 702 LINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG 761
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
++P + ++ DG CGK EK
Sbjct: 762 ISPDGYIYCILIDG---CGKEGNLEK 784
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P +L+ GL ++ L+ A +++++MI+ G P++ + +LI+ +
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + G D+ Y LI + +A ++EA LL ++ E G P Y
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ A +F ++ G PN +YT LI G VEA + M E G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P R + + L GK
Sbjct: 622 LIPDIRAYSAIIHSLSKNGK 641
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++ G + K ++++M K+ P+L T+N+ I +C++G V+ +E+
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEV 298
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D TY +L+ K EA + ++ G NP Y +I G +
Sbjct: 299 KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIK 358
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G ++A E+ +G N Y +I + G +A + EM GL P +
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT 418
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
++L+ DG HD+A+ E L
Sbjct: 419 YNLLIDGY--LKSHDMAKACELL 439
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 2/214 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+K P + + + GL G ++ A ++ M+++G PD T+ L++ CK +
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ S+ G + TY LI K G I+EA R+ ++ G Y +I
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ A F+E+ + G P+ Y LI + +A L EM LT
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + ++ GL C DL + E L+ +R+
Sbjct: 449 PSPFTYSVLISGL--CHSSDLQKANEVLDQMIRN 480
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP L+ G + G +E A ++ ++MI +G ++ T+N++I I K+GE
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G D TY +LI K+ + +A LL + P P Y+
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G A ++ G PN +Y TLI + R+ A L M G
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 181 LTPISRCFDLVTDGL 195
+ P C++ + GL
Sbjct: 517 VLPDLFCYNCLIIGL 531
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L++ + E A +++ MI G PDL +N LI +C++ +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + G + TY I SK+G I A R +++ G P +Y
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG G +A F + KG P+ Y+ +I + G+ EA ++ + G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P ++ + G C + D+ EK QL
Sbjct: 657 VVPDVFLYNSLISGF--CKEGDI-EKASQL 683
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V + ++ G+ AG + A + N+M+ G +PD T+N LI+ KS +
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHD 431
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + TY +LI + + + +A +L ++ +G P +Y
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + +++ A + G P+ Y LI R + EA L++M E G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ P + + + G+ +AE+
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAER 577
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + +G ++ A++ M+ G P+ + LI+ C G
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G D+ Y +I ++SK G EA + ++ G P LY
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A + E+ G PN VY TLI + G +A E+ E
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + DG C +L E
Sbjct: 727 LVPDVVTYSTIIDGY--CKSGNLTE 749
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ GL A +E AK ++ M ++G P+ T+ + I KSGE
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + Y ILI G EA ++E G P Y+
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ +A F + G P+ +Y +LI+ + G +A+ EM G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQ 209
+ P ++ + +GL G+ +L ++IE+
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEE 724
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P LLV G + AK + M G +P+ T+ +LI+ K G
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G +V TY +I ++KAG + +A L + ++ G P Y
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNL 421
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + A +E+K + P+ Y+ LI+ +A L +M G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Query: 181 LTP 183
+ P
Sbjct: 482 VKP 484
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 9/222 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P +L+ G G LE A + ++ +Q S L FNSLI++ CK G+
Sbjct: 757 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGK 815
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + ++ TY ILI A KA M++EA +L ++ P Y
Sbjct: 816 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 875
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G F +++ +G + Y + + + G+ +EA L + G
Sbjct: 876 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 935
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL------EVSLRS 216
+ FD + L C + ++ +E L E+SL S
Sbjct: 936 IKLEDDVFDALIFHL--CKEKQISTVLELLSEMGKEELSLSS 975
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P V L+ G +E A + +M ++ P+ T+++L+ +C G ++
Sbjct: 342 KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 401
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +++ + G D +Y IL+ + K +DEA LL + +P +Y +I
Sbjct: 402 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 461
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ + A FS + KG PN YT +I + G EA+ EM G +P
Sbjct: 462 GMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 521
Query: 184 ISRCFDLVTDG-LKN 197
++L+T G L+N
Sbjct: 522 NGCTYNLITRGFLRN 536
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ + L A ++ K++K G P++ TFN+LI +C G+
Sbjct: 94 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K G A RLL ++ + P +Y
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + Q AF FSE+ +G P+ Y +LI + L EM
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAE 205
+ P F V D L GK HD+ +
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVD 302
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +V L G + A +V+ MIK+G +P++ T+N+L++ C E
Sbjct: 269 MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE 328
Query: 61 VEFCVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ V+++ + VCK G DV +Y LI K I++A L + P Y+
Sbjct: 329 MDEAVKVFDTMVCK-GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G G+ DA F E+ +G P+ Y L+ + R EA L +
Sbjct: 388 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + +V DG+ G+ + A +
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDL 475
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P L+ GL + G L+ A + ++M+ +G PD ++ L++ +CK+
Sbjct: 374 MCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRR 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ D+ Y I+I + +AG ++ A L NL G +P Y
Sbjct: 434 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F E+K KG+ PN Y + R + L EM G
Sbjct: 494 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 553
Query: 181 LTP-ISRCFDLVT----DGLKNCGKHDLAEKIE 208
+ +S LV DGL K L+E ++
Sbjct: 554 FSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L++GL G + + +KMI +G P++ T+ +LI +CK G
Sbjct: 133 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 192
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + S+ + G+C DV Y +I ++ K + +AF L ++ G +P Y +I
Sbjct: 193 IRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 251
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +E+ PN +++T++ + G+ +EA + + M + G+ P
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIE 208
++ + DG +C + ++ E ++
Sbjct: 312 NVVTYNALMDG--HCLRSEMDEAVK 334
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + + L+ L N + ++N+M+ P++ F+++++ +CK G+
Sbjct: 234 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK 293
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + K G +V TY L+ +DEA ++ +V G P Y+
Sbjct: 294 VMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYST 353
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + + A F E+ K PN Y+TL+ GR +A EM G
Sbjct: 354 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 413
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P + ++ D L C L E I L+
Sbjct: 414 QIPDFVSYCILLDYL--CKNRRLDEAIALLK 442
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V ++ L + A + ++MI QG P + T+NSLI +C E
Sbjct: 199 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +V + ++ A+ K G + EA ++ +++ G P Y
Sbjct: 259 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEM 179
++ G R + D+A F + KG P+ Y+TLI + R +E A YL EM
Sbjct: 319 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR-IEKAMYLFEEMCRK 377
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
L P + + + GL + G+
Sbjct: 378 ELIPNTVTYSTLMHGLCHVGR 398
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 2/179 (1%)
Query: 7 NPPVRGRDL--LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+PP D L+ + + + + ++M G P++ T N LI + C + F
Sbjct: 63 HPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFA 122
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + KLG +++T+ LI + G I E L ++ +G P Y +I G
Sbjct: 123 FSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLING 182
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G A ++ P+ VYT++I + + +A N EM G++P
Sbjct: 183 LCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 241
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 71/175 (40%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
LN L+ A N+M+ P + F L+ +I K + + + + G ++
Sbjct: 44 LNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNI 103
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T ILI + + AF +L +++ GH P + + +I+G G+ + F +
Sbjct: 104 YTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDK 163
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + G A L M + P + + D L
Sbjct: 164 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL 218
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G L G LESA+Q+V +M+ G P+ + L+E+ KS +
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + S+ G D Y ILI +S +G ++ AFR+L + ++G P +Y+
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + AF E+ KG PN Y LI + G A N + G
Sbjct: 543 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602
Query: 181 LTPISRCFDLVTDG 194
L P + + DG
Sbjct: 603 LVPNCVTYTSLIDG 616
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G R +L+ L ++G +E+A ++++++ K GS PD+ ++SLI +CK+ +
Sbjct: 493 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTAD 552
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + K G ++ Y LI + K+G I A + ++++ G P Y
Sbjct: 553 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 612
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G +AF ++E+ G P+ VY+ L T C G +A + EM G
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
IS F+ + DG C + + E ++ L V
Sbjct: 673 HASIS-SFNNLVDGF--CKRGKMQETLKLLHV 701
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P +R + L++ LL A + ++ M+ G PD+ T+++LIE CK E
Sbjct: 73 MRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVRE 132
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + TY +LI + ++G ++EAF ++ + G P Y
Sbjct: 133 FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA 192
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A E+ PN VY LI R G EA + EM G
Sbjct: 193 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P +D + GL G+ D A
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRA 276
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ GL + AK ++++M P++ + +LI+ + G
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + G + TY L+ + K G +D A LL +V D H P Y
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G FR DAF SE++ G PN Y+ +I + G +A++ L EMT G
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + G G LA +I
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEI 384
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D LV+GL G ++ A ++ +M++ PD T+N +IE +
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHN 307
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G +V TY I+I + ++G ++A LL + G P +YAP
Sbjct: 308 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 367
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A F ++ P+ Y +LI + GR E+ Y +M E G
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P + + G G + AE++ Q
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQ 456
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG +P + + L+ GL +G + A+ + N ++ +G P+ T+ SLI+ CK G+
Sbjct: 563 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 622
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + G D Y +L S AG +++A L+ + GH S +
Sbjct: 623 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-FNN 681
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +RG+ + I +G PN +I+ G+ E +E+ +
Sbjct: 682 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT 741
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+R F + + N GK
Sbjct: 742 SESAARHFSSLFMDMINQGK 761
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V +++ GL +G E A ++ +M +G P+ + LI C+ G
Sbjct: 318 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 377
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + K+ D+ Y LI +SK G ++E+ + + E G P Y+
Sbjct: 378 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 437
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A + G PN +Y L+ + + ++ M + G
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +R + ++ L + G + A ++
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRV 524
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L++ ++AK+++ +M ++G + T+N LI +C+SG
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + G D TY LI + K+ +EA LL + P +YA
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G D+AF E+ G PN+ Y L+ + G+ A+ L +M
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287
Query: 181 LTPISRCFDLVTDG-LKNCGKHDLAEKIEQLE 211
P + ++L+ +G ++ K D + ++E
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEME 319
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P L+ G G + A ++ +KM K PDL +NSLI + K G
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G + TY LI K G ++ A +L+ +++ G P +Y
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472
Query: 121 IIKGAFR-----------------------------------RGQFDDAFCFFSEIKIKG 145
+++ F+ G + AF SEI+ G
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ VY++LI+ + +A L EM++ G+ P C++ + DGL G A
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592
Query: 206 KI 207
+
Sbjct: 593 NV 594
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+SD G P D+LV +G ++ A ++V M +G P + N+L++ + ++
Sbjct: 39 LSDSGHRSPAV-LDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADA 97
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G DV TY LI A K D A ++L + E G Y
Sbjct: 98 MALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNV 157
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G ++AF F +++ G P+ Y LI + R EA L EM+
Sbjct: 158 LIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE 217
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + DG G D A K+
Sbjct: 218 LKPNVVVYANLIDGFMREGNADEAFKM 244
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +L+++G + A +++++M G P++ T++ +I +C+SGE E ++
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G + Y LI + G + A + + + P Y +I G +
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +++ +F++++ +G PN Y+ LI + G A + M + GL P
Sbjct: 410 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 469
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ D L++ K D EK+
Sbjct: 470 Y---IDLLESYFKSDDIEKV 486
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 19/198 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L G +AG LE A ++ +M +G + +FN+L++ CK G+
Sbjct: 633 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGK 691
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL----VEDGHNPFPS 116
++ +++ + + G + T + +I +S+AG + E + L E F S
Sbjct: 692 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 751
Query: 117 LYA--------------PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L+ +I+ + G D A I K P Y ++ R
Sbjct: 752 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 811
Query: 163 GGRFVEAANYLMEMTEMG 180
G+ EA N L EM + G
Sbjct: 812 KGKLSEALNLLKEMDKRG 829
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+ +G + ++ L G L+ A ++V +M QG PD+ T+N++I +C +
Sbjct: 409 MLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDL 468
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ ++ + G A+ TY LI A+ + G E RL ++ G Y
Sbjct: 469 MEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNG 528
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + G D + E+ KG PN Y LI + G+ +A EM G
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588
Query: 181 LTPISRCFDLVTDGLKNCG-KHDLAEKIEQL 210
LTP ++ + +GL G H +E+L
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKL 619
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ G + A+ M+++M+ +G + + +N +I +CK G+
Sbjct: 374 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGK 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ TY +I + +++EA + NL+E+G Y
Sbjct: 434 LDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNT 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G++ + SE+ + G + Y LI + G + L EM G
Sbjct: 494 LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG 553
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++++ + L GK
Sbjct: 554 IKPNNFSYNMLINELCKAGK 573
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 34/226 (15%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS----------------- 58
LV GL G + A ++V++M+ QG P + T+ L++ +C++
Sbjct: 253 LVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVN 312
Query: 59 --------------GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
G++ E+Y + G DV TY IL+ + K G A R+L
Sbjct: 313 VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLD 372
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ E G P Y+ ++ R G +DDA ++ KG N Y +I + G
Sbjct: 373 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ +A + EM G P ++ + L N +DL E+ E +
Sbjct: 433 KLDQATRLVQEMKSQGCKPDICTYNTMIYHLCN---NDLMEEAEHI 475
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ GL G SA +M+++M ++G P++ T+++L+ + C++G
Sbjct: 339 MGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M + G + Y +I A+ K G +D+A RL+ + G P Y
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++A F + +G N Y TLI R GR+ E EM G
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++G L G L A ++ M +G PD+ T++ L+ +CK G V M + + G
Sbjct: 319 VIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKG 378
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY L+ + + GM D+A +L ++ G + Y II + G+ D A
Sbjct: 379 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQAT 438
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+K +G P+ Y T+I EA + + E G+ ++ + L
Sbjct: 439 RLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHAL 498
Query: 196 KNCGK 200
G+
Sbjct: 499 LRNGR 503
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ L AG + A ++ +M+ QG PD+ T+N+LI +CK G
Sbjct: 549 MVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 608
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + D+ TY ILI K ++D+A LL + G P +
Sbjct: 609 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGM 668
Query: 121 IIKGAFRR 128
+++ R+
Sbjct: 669 MVQNFVRQ 676
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LL G + ++ ++M+ G D+ ++N LI+ +CK G V+ + + + G
Sbjct: 494 LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG 553
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ +Y +LI + KAG + +A L ++ G P Y +I G + G A
Sbjct: 554 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 613
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
++ + P+ Y LI+ + +AA L + G+ P R + ++
Sbjct: 614 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMV 670
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 75/197 (38%), Gaps = 31/197 (15%)
Query: 18 QGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC 77
+ L G A ++ M + G PD + ++I + G V + + +G
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
ADV+T+ L+ + G + EA RL+ ++ G P Y +++G R Q D+A
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304
Query: 138 FS---EIKI----------------------------KGHPPNRPVYTTLITMCGRGGRF 166
E+ + KG PP+ Y+ L+ + GRF
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364
Query: 167 VEAANYLMEMTEMGLTP 183
A L EM E G P
Sbjct: 365 GSAVRMLDEMEEKGCAP 381
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+Y +++ +++A +A L ++ D P + + R G+ DA +
Sbjct: 144 SYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGM 203
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
G P+ +Y T+I G EAA L EM MG F+ + GL G+
Sbjct: 204 ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGR 262
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 5/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+P V+ LL++G +G + +++M++ G P+ +N+LI +CK+G
Sbjct: 20 MKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGM 79
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E Y +V +Y I+I KA I++A L + E GH P P Y+
Sbjct: 80 LAE-AESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSS 138
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I++ + G A F+E+ KG P+ + L++ R + EA M G
Sbjct: 139 IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 198
Query: 181 LTPISRCFDLVTDGLKNCGKHD----LAEKIEQLEVS 213
P ++ + GL K D L E+++Q +VS
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS 235
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL A AK+M +M +G P + T+N+L+E + + +++ +E+ Y +
Sbjct: 280 ILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQ 339
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
++ TY+ILI ++ K ++EAF+LL + + G P ++ ++ R G+ DDA
Sbjct: 340 VPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDA 399
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + E+ L+ R G EA ++L +MT+ G+ P +D + G
Sbjct: 400 FELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVG 459
Query: 195 LKNCGKHDLAEKI 207
L GK D A K+
Sbjct: 460 LCWQGKADQARKL 472
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V + L++GLL+ L+ A ++ M+ Q P++ T+ LI ++CK+ +
Sbjct: 301 MRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQ 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ ++ G + +++L+ +++AG +D+AF L +
Sbjct: 361 VEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNI 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
++ G RRG D+A F ++ G P++ Y L+ +C +G
Sbjct: 421 LLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQG 464
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 2/202 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +VQ G + A + +M +G +PD+ FN L+ + ++ +
Sbjct: 124 MEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARK 183
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ S+ G DV TY +I + K +DEA LL + ++ +P Y
Sbjct: 184 IHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 243
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMTE 178
+I + + A+ F ++ P P Y+ LI + G + R EA EM
Sbjct: 244 LIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRG 303
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
G++P ++ + +GL + K
Sbjct: 304 RGISPTVVTYNTLLEGLLSTAK 325
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ G A +E A + +M + G P ++S++++ CK+G V +++
Sbjct: 96 PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDV 155
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ + +L+ + +A I EA L ++ G P Y +I G +
Sbjct: 156 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 215
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ D+A +K + P YTTLI + R +A +M E
Sbjct: 216 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE 266
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
++ L+ A + A+ +V +M G PD+++ LI KSG + + + G
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
+ Y LI + KAGM+ EA L + + P Y II G + + A
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALA 119
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
F E++ GHPP Y++++ + G +A + EM G P F+++ GL
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179
Query: 197 NCGK-HDLAE 205
K H+ E
Sbjct: 180 RARKIHEARE 189
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ L AG L A+ + +M Q P++ ++N +I+ CK+
Sbjct: 55 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARN 113
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + +LG Y ++ + K G + +A + + G P +
Sbjct: 114 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 173
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +R + +A F + +G P+ Y T+I + + EA L M +
Sbjct: 174 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233
Query: 181 LTPISRCFDLVTDGL 195
++P + + D L
Sbjct: 234 VSPTFVTYTTLIDHL 248
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 66/141 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P + ++L+ L +E A ++++ M +G P L+ + L+ + ++G
Sbjct: 336 MLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGR 395
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + ++ V + IL+ + + G +DEA L + + G P Y
Sbjct: 396 LDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDK 455
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
++ G +G+ D A E+
Sbjct: 456 LVVGLCWQGKADQARKLVEEL 476
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKGF P ++ ++L+ L AG L+ A ++ +M + + + N L++ I + G
Sbjct: 371 MRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGS 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
V+ + + G D TY L+ + G D+A +L+ LV DG
Sbjct: 431 VDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
>gi|356573733|ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Glycine max]
Length = 752
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L A LE + K++ G D ET+NSLI G EMY S+ K G
Sbjct: 165 VIRYLAKAEKLEVSFCCFKKILNAGCKVDTETYNSLITLFLNKGLPYKAFEMYESMEKAG 224
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D STY+++IP ++K+G +D AF+L + G P +++A ++ + G+ D A
Sbjct: 225 CSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAM 284
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E++ G+ P +Y +LI + G+ A EM G P + L+ +
Sbjct: 285 KVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESH 344
Query: 196 KNCGKHDLA 204
GK ++A
Sbjct: 345 AKSGKLEIA 353
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + LV + AG L+SA ++ +M G P + SLIE+ KSG+
Sbjct: 255 MKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGK 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + G + Y ++I + +K+G ++ A ++ + G P PS YA
Sbjct: 315 LETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYAC 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ GQ D A ++ + G P YT L+T+ AA L+EM MG
Sbjct: 375 LLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 434
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ D++ +K G DLA
Sbjct: 435 YSVDVTASDILMVYIKE-GSVDLA 457
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LN G A +M M K G D T+ +I + KSG ++ +++ + G
Sbjct: 200 LITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRG 259
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ + L+ ++ KAG +D A ++ + G+ P P++Y +I+ + G+ + A
Sbjct: 260 FRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETAL 319
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E+++ G PN +YT +I + G+ A + ++M + G P + + +
Sbjct: 320 RLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYACLLEMH 379
Query: 196 KNCGKHDLAEKI 207
G+ D A K+
Sbjct: 380 AASGQIDPAMKL 391
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L++ L +G L++A ++ +M +G P L F SL++++ K+G ++ +++Y +
Sbjct: 233 ELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRG 292
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + Y LI + K+G ++ A RL + G P LY II+ + G+ +
Sbjct: 293 YGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEI 352
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F +++ G P Y L+ M G+ A MT GL P + ++
Sbjct: 353 AMSTFLDMEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLT 412
Query: 194 GLKNCGKHDLAEKI 207
L N D+A KI
Sbjct: 413 LLANKKLVDVAAKI 426
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V + LV GL G A ++ M+K+G P++ TF +LI+ K G+
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGK 272
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y + ++ DV TY LI + G +DEA ++ + + +G+ P Y
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +D F E+ KG N YT LI GR A +M
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392
Query: 181 LTPISRCFDLVTDGL 195
P R ++++ DGL
Sbjct: 393 APPDIRTYNVLLDGL 407
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V L+ L +L A ++ N+M G P++ T+NSL+ +C+ G
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + K G +V T+ LI A K G I EA L +++ P Y +I G
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ D+A F ++ G+ PN YTTLI + R + EM++ GL
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + ++ G G+ D+A+++
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEV 384
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG +L+QG G + A+++ N+M + + PD+ T+N L++ +C +G
Sbjct: 353 MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGY 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++ + K ++ TY I+I + K G +++AF L +L G P Y
Sbjct: 413 VEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTT 472
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
+I G RRG +A F ++K G PN V
Sbjct: 473 MISGFCRRGFIHEADALFKKMKEDGFLPNESV 504
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + KM+K G +PDL TF SL+ C +E + ++ + +G +V TY LI
Sbjct: 136 ASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIH 195
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ K ++ A + + + ++G P Y ++ G G++ DA ++ +G P
Sbjct: 196 CLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQP 255
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
N +T LI + G+ +EA M +M + P + + +GL G+ D A ++
Sbjct: 256 NVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMF 315
Query: 209 QL 210
L
Sbjct: 316 YL 317
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL G L+ A+QM M G P+ T+ +LI CKS VE ++
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349
Query: 68 YYSVCKLGSCADVSTYKILIPA---VSKAGMIDEAFRLL-----------HNLVEDG--H 111
+Y + + G A+ TY +LI V + + E F + +N++ DG +
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409
Query: 112 NPFPS-------------------LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
N + Y II+G + G+ +DAF F + KG PN
Sbjct: 410 NGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVIT 469
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
YTT+I+ R G EA +M E G P
Sbjct: 470 YTTMISGFCRRGFIHEADALFKKMKEDGFLP 500
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G P L T N ++ +C+S + + KLG D+ T+ L+ I++A
Sbjct: 112 GISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA 171
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
L +V G P Y +I + + A F+++ G PN Y +L++
Sbjct: 172 LALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
GR+ +AA L +M + G+ P F + D GK A+++ ++ + +
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 1/188 (0%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R +L GL N + E A + +M+ P + F L+ I K + + ++ +
Sbjct: 51 RKILRNGLHNLQFNE-ALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
LG + T I++ V ++ A L +++ G P + ++ G + +
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA F +I G PN YTTLI + A +M + G+ P ++ +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229
Query: 193 DGLKNCGK 200
GL G+
Sbjct: 230 SGLCEIGR 237
>gi|224576641|gb|ACN56994.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALXKHGKVDEA 146
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALXKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTP 183
G+TP
Sbjct: 192 KGITP 196
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRMEE 155
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERL 114
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG G + L+ L ++ A M M +G PD+ TFNSLI +CK +
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +Y + G A+ TY LI A + G + EA +L+++++ G Y
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 569
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK R G + F ++ KG PN LI R G A +L +M G
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629
Query: 181 LTPISRCFDLVTDGLKNCGK 200
LTP ++ + +GL G+
Sbjct: 630 LTPDIVTYNSLINGLCKTGR 649
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ L G ++ A ++VN M+ +G D T+N LI+ +C++G +E + ++ +
Sbjct: 533 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + + ILI + + G I A L +++ G P Y +I G + G+ +
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 652
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A F +++++G P+ Y TLI+ + G F +A L + G P
Sbjct: 653 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 702
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG NP ++L+ GL G ++ A + + MI +G PD+ T+NSLI +CK+G
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G C D TY LI K GM D+A LL V+ G P +
Sbjct: 650 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 709
Query: 121 IIKGAFRRG 129
++ + G
Sbjct: 710 LVSNFIKEG 718
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ GL GYL SA++++N+M +G +P++ T+ LI+ CK G
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G + Y LI A+ K + +A + ++ G P +
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + +F++A + ++ ++G N Y TLI R G EA + +M
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 555
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G LE A+ ++++M +G + +N LI +CK +
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + M+ + G D+ T+ LI + K +EA L +++ +G Y
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RRG +A +++ +G P + Y LI R G + +M G
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + +++ +GL C ++ +E L
Sbjct: 595 LNPNNISCNILINGL--CRTGNIQHALEFLR 623
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L AG +E + M+ +G +P+ + N LI +C++G ++ +E + G
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY LI + K G EA L L +G P Y +I + G FDDA
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 689
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT 158
S G PN + L++
Sbjct: 690 LLLSRGVDSGFIPNEVTWYILVS 712
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + + GL + A ++V++M+ +G P+ T+ L+ +C+ G+V+ +
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH-NLVEDGHNPFPSLYAPIIKGAF 126
V +V + LI G +DEA ++H +++ G P Y +I G
Sbjct: 345 LNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 400
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
++G A +E++IKG PN YT LI + GR EA N L EM+ GL
Sbjct: 401 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLA 456
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV-E 62
+GF P +L+ GL G ++ A+ ++NK+ +P++ FN+LI G + E
Sbjct: 316 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYVSRGRLDE 371
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
M+ S+ +G D+ TY LI + K G + A L++ + G P Y +I
Sbjct: 372 AKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILI 431
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ G+ ++A E+ KG N Y LI+ + + +A N +M+ G
Sbjct: 432 DRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCK 491
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P F+ + GL K + A + Q
Sbjct: 492 PDIFTFNSLIFGLCKVNKFEEALGLYQ 518
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNK-MIKQGSDPDLETFNSLIETICKSGEVEFCV 65
NP V + L+ G ++ G L+ AK ++++ M+ G PD+ T+N+LI +CK G +
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E+ + G +V TY ILI K G ++EA +L + G Y +I
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + DA F ++ KG P+ + +LI + +F EA +M G+
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R ++++ LL + + +M+ +G P + TF +++ +C EV+ +
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G + Y+ LI A+ K G ++E +LL ++ G P + + I G +
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ +A + ++G PN Y L+ R G+ EA L ++ P
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVL 355
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
F+ + +G + G+ D A+ +
Sbjct: 356 FNTLINGYVSRGRLDEAKAV 375
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 70/166 (42%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
+P ++N +++ + + ++Y + G V T+ +++ A+ +D A
Sbjct: 179 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 238
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
LL ++ G P +Y +I + G+ ++ E+ + G P+ + I
Sbjct: 239 LLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 298
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ R EAA + M G TP S + ++ GL GK D A +
Sbjct: 299 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P ++++ L G +E A +++++M P+L T N +++ +CK+ ++E
Sbjct: 382 KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEE 441
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ S + G D TY LI + K G +DEA+RL +++ GHN P +Y +I+
Sbjct: 442 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 501
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F G+ +D F E+ +G P+ + T + + G + ++ G P
Sbjct: 502 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 561
Query: 184 ISRCFDLVTDGLKNCGK 200
R + ++ GL G+
Sbjct: 562 DVRSYSILIHGLTKAGQ 578
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P VR +L+ GL AG + + M +QG D +N++++ CKSG+V
Sbjct: 558 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 617
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + V+TY ++ ++K +DEA+ L G LY+ +I G
Sbjct: 618 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 677
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D+A+ E+ KG PN + +L+ + EA M EM P
Sbjct: 678 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 737
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + ++ +GL K++ A
Sbjct: 738 TYTYSILINGLCRVQKYNKA 757
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + + + AG +E + + + G PD+ +++ LI + K+G+
Sbjct: 522 RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 581
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++++ + G D Y ++ K+G + +A+ +L + E P + Y I+
Sbjct: 582 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 641
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + D+A+ F E K KG N +Y++LI G+ GR EA L EM + GLTP
Sbjct: 642 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 701
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ + D L AE+I + V +S+
Sbjct: 702 NVYTWNSLLDALVK------AEEINEALVCFQSM 729
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P V +V GL L+ A + + +G + ++ ++SLI+ K G
Sbjct: 624 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 683
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K G +V T+ L+ A+ KA I+EA ++ E P Y+
Sbjct: 684 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSI 743
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R +++ AF F+ +++ +G PN YTT+I+ + G +A + G
Sbjct: 744 LINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 803
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + F+ + +G+ N +
Sbjct: 804 GIPDAASFNALIEGMSNANR 823
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + +++V L A LE A ++ ++G +PD T+ SLI+ + K G+
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 473
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G A+ Y LI G ++ ++ L+ G P +L
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 533
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F +I+ G P+ Y+ LI + G+ E +N M + G
Sbjct: 534 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 593
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQLE 211
+R ++ V DG GK H E +E+++
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMK 625
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
AG ++ A + +++ QG PD ++ S+I +CK+G + E++ + S
Sbjct: 261 KAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY 320
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
Y +I AG ++A++LL L E G P + I+ ++ + D+A F E+
Sbjct: 321 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EV 379
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K PN Y +I M GGR EA L EM L P +++ D L K
Sbjct: 380 MKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKL 439
Query: 202 DLAEKI 207
+ A KI
Sbjct: 440 EEAYKI 445
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+K+G P++ T+NSL++ + K+ E+ + + S+ ++
Sbjct: 674 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 733
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + + ++AF ++ + G P Y +I G + G DA+
Sbjct: 734 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 793
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
F K G P+ + LI R +EA
Sbjct: 794 SLFERFKANGGIPDAASFNALIEGMSNANRAMEA 827
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V LV+ L G + A +V+++ +PD+ +N I+ K+G
Sbjct: 205 MQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 264
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D +Y +I + KAG + EA L + + P Y
Sbjct: 265 VDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 324
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+F+DA+ ++ +G P+ + +++T G+ R V+ A L E+ +
Sbjct: 325 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK-KRKVDEALSLFEVMKKD 383
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S ++++ D L G+ + A +I
Sbjct: 384 AEPNSSTYNIIIDMLCLGGRVEEAYRI 410
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G+ P + L L+ A L+ A V M + P + LI + ++
Sbjct: 135 MAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 194
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + ++G V + L+ A+++ G + +A L+ + P LY
Sbjct: 195 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 254
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G D A+ FF E+K +G P+ YT++I + + GR EA +M
Sbjct: 255 CIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 314
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + G + G+ + A K+
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKL 341
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S +G NP L+ GL G ++ A ++ KM+ G + + + SLI G
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 509
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E +++ + + G D++ + V KAG +++ + ++ G P Y+ +
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 569
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + GQ + F +K +G + Y ++ + G+ +A L EM E +
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 629
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL + D A
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEA 652
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ L+ A + A M + P+ T++ LI +C+ +
Sbjct: 694 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G +V TY +I ++K G I +A+ L +G P + +
Sbjct: 754 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 813
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G + +A+ F E +++G
Sbjct: 814 LIEGMSNANRAMEAYQVFEETRLRG 838
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
S Y +LI A+++A + A LL + E G+ L+ +++ R GQ DA E
Sbjct: 180 SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE 239
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+K P+ +Y I G+ G A + E+ GL P + + L G+
Sbjct: 240 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 299
Query: 201 HDLAEKI-EQLEVSLRSV 217
AE++ Q+E RSV
Sbjct: 300 LGEAEELFAQMEAE-RSV 316
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P ++++ L G +E A +++++M P+L T N +++ +CK+ ++E
Sbjct: 248 KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEE 307
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ S + G D TY LI + K G +DEA+RL +++ GHN P +Y +I+
Sbjct: 308 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 367
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F G+ +D F E+ +G P+ + T + + G + ++ G P
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 427
Query: 184 ISRCFDLVTDGLKNCGK 200
R + ++ GL G+
Sbjct: 428 DVRSYSILIHGLTKAGQ 444
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P VR +L+ GL AG + + M +QG D +N++++ CKSG+V
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + V+TY ++ ++K +DEA+ L G LY+ +I G
Sbjct: 484 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 543
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D+A+ E+ KG PN + +L+ + EA M EM P
Sbjct: 544 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 603
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + ++ +GL K++ A
Sbjct: 604 TYTYSILINGLCRVQKYNKA 623
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + + + AG +E + + + G PD+ +++ LI + K+G+
Sbjct: 388 RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 447
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++++ + G D Y ++ K+G + +A+ +L + E P + Y I+
Sbjct: 448 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 507
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + D+A+ F E K KG N +Y++LI G+ GR EA L EM + GLTP
Sbjct: 508 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 567
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ + D L AE+I + V +S+
Sbjct: 568 NVYTWNSLLDALVK------AEEINEALVCFQSM 595
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P V +V GL L+ A + + +G + ++ ++SLI+ K G
Sbjct: 490 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 549
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K G +V T+ L+ A+ KA I+EA ++ E P Y+
Sbjct: 550 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSI 609
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R +++ AF F+ +++ +G PN YTT+I+ + G +A + G
Sbjct: 610 LINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 669
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + F+ + +G+ N +
Sbjct: 670 GIPDAASFNALIEGMSNANR 689
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + +++V L A LE A ++ ++G +PD T+ SLI+ + K G+
Sbjct: 280 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G A+ Y LI G ++ ++ L+ G P +L
Sbjct: 340 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNT 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ F+ G+ + F +I+ G P+ Y+ LI + G+ E +N M + G
Sbjct: 400 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 459
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQLE 211
+R ++ V DG GK H E +E+++
Sbjct: 460 FALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG ++ A + +++ QG PD ++ S+I +CK+G + E++ + S
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 187
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y +I AG ++A++LL L E G P + I+ ++ + D+A F E+
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVM 246
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
K PN Y +I M GGR EA L EM L P +++ D L K +
Sbjct: 247 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 306
Query: 203 LAEKI 207
A KI
Sbjct: 307 EAYKI 311
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+K+G P++ T+NSL++ + K+ E+ + + S+ ++
Sbjct: 540 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 599
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + + ++AF ++ + G P Y +I G + G DA+
Sbjct: 600 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 659
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
F K G P+ + LI R +EA
Sbjct: 660 SLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ V LV+ L G + A +V+++ +PD+ +N I+ K+G
Sbjct: 71 MQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D +Y +I + KAG + EA L + + P Y
Sbjct: 131 VDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+F+DA+ ++ +G P+ + +++T G+ R V+ A L E+ +
Sbjct: 191 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK-KRKVDEALSLFEVMKKD 249
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S ++++ D L G+ + A +I
Sbjct: 250 AEPNSSTYNIIIDMLCLGGRVEEAYRI 276
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S +G NP L+ GL G ++ A ++ KM+ G + + + SLI G
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 375
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E +++ + + G D++ + V KAG +++ + ++ G P Y+ +
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + GQ + F +K +G + Y ++ + G+ +A L EM E +
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL + D A
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEA 518
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G+ P + L L+ A L+ A V M + P + LI + ++
Sbjct: 1 MAVLGYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + ++G V + L+ A+++ G + +A L+ + P LY
Sbjct: 61 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G D A FF E+K +G P+ YT++I + + GR EA +M
Sbjct: 121 CIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + G + G+ + A K+
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKL 207
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
S Y +LI A+++A + A LL + E G+ L+ +++ R GQ DA E
Sbjct: 46 SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE 105
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+K P+ +Y I G+ G A + E+ GL P + + L G+
Sbjct: 106 VKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 165
Query: 201 HDLAEKI-EQLEVSLRSV 217
AE++ Q+E RSV
Sbjct: 166 LGEAEELFAQMEAE-RSV 182
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G L G LESA+Q+V +M+ G P+ + L+E+ KS +
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + S+ G D Y ILI +S +G ++ AFR+L + ++G P +Y+
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + AF E+ KG PN Y LI + G A N + G
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729
Query: 181 LTPISRCFDLVTDG 194
L P + + DG
Sbjct: 730 LVPNCVTYTSLIDG 743
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G R +L+ L ++G +E+A ++++ + K GS PD+ ++SLI +CK+ +
Sbjct: 620 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 679
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + K G ++ Y LI + K+G I A + ++++ G P Y
Sbjct: 680 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 739
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G +AF ++E+ G P+ VY+ L T C G +A + EM G
Sbjct: 740 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
IS F+ + DG C + + E ++ L V
Sbjct: 800 HASISS-FNNLVDGF--CKRGKMQETLKLLHV 828
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P +R + L++ LL A + ++ M+ G PD+ T+++LIE CK E
Sbjct: 200 MRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVRE 259
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + TY +LI + ++G ++EAF ++ + G P Y
Sbjct: 260 FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA 319
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + ++A E+ PN VY LI R G EA + EM G
Sbjct: 320 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 379
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P +D + GL G+ D A
Sbjct: 380 VQPNKITYDNLVRGLCKMGQMDRA 403
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ GL + AK ++++M P++ + +LI+ + G
Sbjct: 305 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 364
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + G + TY L+ + K G +D A LL +V D H P Y
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G FR DAF SE++ G PN Y+ +I + G +A++ L EMT G
Sbjct: 425 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + G G LA +I
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEI 511
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D LV+GL G ++ A ++ +M++ PD T+N +IE +
Sbjct: 375 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G +V TY I+I + ++G ++A LL + G P +YAP
Sbjct: 435 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A F ++ P+ Y +LI + GR E+ Y +M E G
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P + + G G + AE++ Q
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQ 583
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG +P + + L+ GL +G + A+ + N ++ +G P+ T+ SLI+ CK G+
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 749
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + G D Y +L S AG +++A L+ + GH S +
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-FNN 808
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +RG+ + I +G PN +I+ G+ E +E+ +
Sbjct: 809 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT 868
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+R F + + N GK
Sbjct: 869 SESAARHFSSLFMDMINQGK 888
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V +++ GL +G E A ++ +M +G P+ + LI C+ G
Sbjct: 445 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 504
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + K+ D+ Y LI +SK G ++E+ + + E G P Y+
Sbjct: 505 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 564
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A + G PN +Y L+ + + ++ M + G
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 624
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +R + ++ L + G + A ++
Sbjct: 625 VMLDNRIYGILIHNLSSSGNMEAAFRV 651
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L++ ++AK+++ +M ++G + T+N LI +C+SG
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + G D TY LI + K+ +EA LL + P +YA
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G D+AF E+ G PN+ Y L+ + G+ A+ L +M
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414
Query: 181 LTPISRCFDLVTDG-LKNCGKHDLAEKIEQLE 211
P + ++L+ +G ++ K D + ++E
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEME 446
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P L+ G G + A ++ +KM K PDL +NSLI + K G
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G + TY LI K G ++ A +L+ +++ G P +Y
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599
Query: 121 IIKGAFR-----------------------------------RGQFDDAFCFFSEIKIKG 145
+++ F+ G + AF S I+ G
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ VY++LI+ + +A L EM++ G+ P C++ + DGL G A
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719
Query: 206 KI 207
+
Sbjct: 720 NV 721
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+SD G P D+LV +G ++ A ++V M +G P + N+L++ + ++
Sbjct: 166 LSDSGHRSPAV-LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADA 224
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G DV TY LI A K D A ++L + E G Y
Sbjct: 225 MALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNV 284
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G ++AF F +++ G P+ Y LI + R EA L EM+
Sbjct: 285 LIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE 344
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + DG G D A K+
Sbjct: 345 LKPNVVVYANLIDGFMREGNADEAFKM 371
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L G +AG LE A ++ +M +G + +FN+L++ CK G+
Sbjct: 760 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGK 818
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL----VEDGHNPFPS 116
++ +++ + + G + T + +I +S+AG + E + L E F S
Sbjct: 819 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 878
Query: 117 LYA--------------PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L+ +I+ + G D A I K P Y ++ R
Sbjct: 879 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 938
Query: 163 GGRFVEAANYLMEMTEMGLTPI-SRCFDLVTD 193
G+ EA N L EM + G+ P ++C L+T+
Sbjct: 939 KGKLSEALNLLKEMDKRGICPSENQCLILLTN 970
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +L+++G + A +++++M G P++ T++ +I +C+SGE E ++
Sbjct: 417 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 476
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G + Y LI + G + A + + + P Y +I G +
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +++ +F++++ +G PN Y+ LI + G A + M + GL P
Sbjct: 537 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 596
Query: 188 FDLVTDGLKNCGKHDLAEKIEQ 209
+ D L++ K D EK+
Sbjct: 597 Y---IDLLESYFKSDDIEKVSS 615
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P ++ + + + AG E + M ++ + PD +++ LI + K+G
Sbjct: 508 MVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGF 567
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++YS+ + G D Y I+I K G +++A++LL + G P Y
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A+ F E K K N +Y++LI G+ GR EA L E+ + G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
LTP ++ + D L AE+I + V +S+
Sbjct: 688 LTPNVYTWNSLLDALVK------AEEINEALVCFQSM 718
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P V L++G G ++SA ++++M D D+ +N I++ K G+
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D TY +I + KA +DEA + +L ++ P Y
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+FD+A+ + KG P+ Y ++T + G+ EA EM +
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK-D 372
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++++ D L GK D A
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDCA 396
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P V ++ GL L+ A + + + + ++ ++SLI+ K G
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G +V T+ L+ A+ KA I+EA ++ E P Y
Sbjct: 673 IDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F+ AF F+ E++ +G P+ YTT+I+ + G EA G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 181 LTPISRCFDLVTDGLKN 197
P S C++ + +GL N
Sbjct: 793 GVPDSACYNAMIEGLSN 809
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + F P R +L+ GL+ AG+ ++ M +QG D +N +I+ CK G+
Sbjct: 543 IKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G V TY +I ++K +DEA+ L +Y+
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A+ E+ KG PN + +L+ + EA M E+
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 181 LTPISRCFDLVTDGL 195
TP + ++ +GL
Sbjct: 723 CTPNQVTYGILINGL 737
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +++++G P++ T+NSL++ + K+ E+ + + S+ +L
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + K ++AF + + G P Y +I G + G +A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F K G P+ Y +I G R ++A + E GL ++ ++ D L
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842
Query: 196 KNCGKHDLAEKIEQLEVSLR 215
K+D E+ + LR
Sbjct: 843 H---KNDCLEQAAIVGAVLR 859
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 43/239 (17%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV-EFCV- 65
P + ++L+ L AG L+ A ++ + M K G P++ T N +++ +CKS ++ E C
Sbjct: 375 PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAI 434
Query: 66 --EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+M Y VC D T+ LI + K G +D+A+++ +++ +Y +IK
Sbjct: 435 FEQMDYKVCT----PDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIK 490
Query: 124 GAFRRGQFDDAF-----------------------------------CFFSEIKIKGHPP 148
F G+ +D F EIK + P
Sbjct: 491 NFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVP 550
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y+ LI + G E M E G +R +++V DG CGK + A ++
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P L+ + + + +M + G +P + F +LI K G V+ +
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + AD+ Y + I + K G +D A++ H + +G P Y +I
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + D+A F ++ P Y T+I G G+F EA + L G P
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
++ + L+ GK D A ++
Sbjct: 344 IAYNCILTCLRKMGKVDEALRV 365
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P V +V + A L +V M K P + +LI
Sbjct: 124 MSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + +LG V + LI +K G +D A LL + + LY
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D A+ FF EI+ G P+ YT++I + + R EA + +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ + G + GK D A
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEA 327
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L G ++ A ++ +M K+ + P+L T+N LI+ +C++G+++
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDC 395
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ S+ K G +V T I++ + K+ +DEA + + P + +I
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLID 455
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DDA+ + ++ N VYT+LI GR + +M +P
Sbjct: 456 GLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSP 515
Query: 184 ISRCFDLVTDGLKNCGK 200
+ + D + G+
Sbjct: 516 DLQLLNTYMDCMFKAGE 532
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + L+ L+ A + A M + P+ T+ LI +CK +
Sbjct: 686 KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + K G +Y +I ++KAG I EA L +G P + Y +I+
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 124 GAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITM 159
G + DAF F E + +G H N+ L T+
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 2/186 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ Q++ +M G P + T ++ + K+ ++ ++ ++ K S Y
Sbjct: 114 FDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTT 173
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI A S D L + E G+ P L+ +I+G + G+ D A E+K
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
+ +Y I G+ G+ A + E+ GL P + + L C + L E
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL--CKANRLDE 291
Query: 206 KIEQLE 211
+E E
Sbjct: 292 AVEMFE 297
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF L++ + A +K+ K G P+L ++S+I +CK G
Sbjct: 270 MMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGS 329
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DGHNPFPSLYA 119
V+ E+ + K G +V T+ LI + K G + AFRL L+ D + P Y
Sbjct: 330 VKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYT 389
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + A F +K +G PN YTTLI + G F +A + M+
Sbjct: 390 AMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNE 449
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + ++ + DGL G+ + A K+
Sbjct: 450 GFFPNTCTYNSIVDGLCKRGRAEEAFKL 477
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P ++ G G + A + + +M+++G D T +I C+
Sbjct: 235 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V V ++ V K+G ++ Y +I + K G + +AF LL +V++G P +
Sbjct: 295 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354
Query: 121 IIKGAFRRGQFDDAF-CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G ++G + AF F I+ + PN YT +I+ + + A M E
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
GL P + + + DG +C + ++ E +E+
Sbjct: 415 GLVPNTNTYTTLIDG--HCKAGNFSKAYELMEL 445
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 6/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++GF P + +V GL G E A +++N + + D T+ LI CK +
Sbjct: 446 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRAD 505
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K+G D+ Y LI A + M+ ++ +L +++ G P Y
Sbjct: 506 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTS 565
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + A FF ++ G P+ Y LI+ + R EA M + G
Sbjct: 566 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 625
Query: 181 LTP--ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L+P ++R VT + C D A + LE
Sbjct: 626 LSPCEVTR----VTLTYEYCKTEDFASAMVILE 654
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+ P V ++ G L A+ + +M +QG P+ T+ +LI+ CK+G
Sbjct: 380 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 439
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + G + TY ++ + K G +EAF+LL+ ++ Y +I
Sbjct: 440 YELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE 499
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+R + A F +++ G P+ +YTTLI R ++ E+ ++GL P
Sbjct: 500 QCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 559
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + G K LA K Q
Sbjct: 560 KETYTSMICGYCREKKVSLAVKFFQ 584
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L+ A M+ M QG N +I + VE+ ++ + G D TY
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
K +I + G + EA R + ++E G + II + + A FF ++
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G PN Y+++I+ + G +A L EM + G P
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 347
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G + +L+ GL+ G + A+++ ++M +G PD+ ++ +LI+ K G
Sbjct: 586 MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGN 645
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G ++V Y +L+ ++G I++A LL + G P Y
Sbjct: 646 MQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCT 705
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G +AF F E+K+KG P+ VYTTL+ C R VE A + E E G
Sbjct: 706 IIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND-VERAITIFETNEKG 764
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
S F+ + + + GK +L
Sbjct: 765 CASSSAPFNALINWVFKFGKTELT 788
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
V+G+ ++G L+ A +V +M G P++ + +LI+T + V + + + G
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
D Y LI +SKA +DEA L +VE+G P Y I G G+F A
Sbjct: 487 APDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADK 546
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ E+ G PN+ + T LI + G+ +EA + M E G+ ++ + ++ +GL
Sbjct: 547 YVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLV 606
Query: 197 NCGKHDLAEKI 207
GK + AE+I
Sbjct: 607 KNGKVNDAEEI 617
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P + G + AG SA + V +M++ G P+ LI CK G+
Sbjct: 516 MVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGK 575
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + S+ + G D TY +L+ + K G +++A + H + G P Y
Sbjct: 576 VIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGT 635
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A F E+ G N +Y L+ R G +A L EM+ G
Sbjct: 636 LIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKG 695
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P + + + DG C DLAE +
Sbjct: 696 FPPNAVTYCTIIDGY--CKSGDLAEAFQ 721
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P + +LL+ GL LE AK ++ +M G D ++ LI+ + K
Sbjct: 271 MSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRN 330
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G D Y I +SK G +++A L ++ G P YA
Sbjct: 331 ADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYAS 390
Query: 121 IIKGAFRR-----------------------------------GQFDDAFCFFSEIKIKG 145
+I+G FR G D A+ E+ G
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN +YTTLI + RF +A L EM E G+ P + C++ + GL K D A
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEA 509
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 15 LLVQGLLN----AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
+L GL+N G + A M++QG D +T+ L+ + K+G+V E+++
Sbjct: 561 VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHE 620
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ G DV +Y LI SK G + +A + +V+ G +Y ++ G R G+
Sbjct: 621 MRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGE 680
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
+ A E+ KG PPN Y T+I + G EA EM GL P S +
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740
Query: 191 VTDGLKNCGKHDLAEKIEQLEVS 213
+ DG C +D+ I E +
Sbjct: 741 LVDGC--CRLNDVERAITIFETN 761
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+ D + + G +E AK + + MI G P + SLIE +
Sbjct: 341 MVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKN 400
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+ + K TY + + +G +D A+ ++ + G P +Y
Sbjct: 401 VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTT 460
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK ++ +F DA E++ +G P+ Y +LI + + EA ++L+EM E G
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENG 520
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
P + + G G+ A+K
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADK 546
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 47/262 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPD---------------- 44
MS KGF P ++ G +G L A Q+ ++M +G PD
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750
Query: 45 -------LET-----------FNSLIETICKSGEVEFCVEMYY-----SVCKLGSCADVS 81
ET FN+LI + K G+ E +M S K G DV
Sbjct: 751 VERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV- 809
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY I+I + K G ++ A L H++ + P Y ++ G + G+ + F F E+
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEV 869
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT------PISRCFDLVTDGL 195
G P+ +Y+ +I + G +A L +M IS C L++ G
Sbjct: 870 IAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLS-GF 928
Query: 196 KNCGKHDLAEKIEQLEVSLRSV 217
G+ ++AEK+ + V L+ +
Sbjct: 929 AKVGEMEVAEKVVENMVRLKYI 950
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+L+ G + G+L+ A + + D P L N L++ + K ++ ++Y +
Sbjct: 157 ILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMV 216
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ DV +Y++LI A + G + A +L E+ ++ D
Sbjct: 217 ERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNV--------------D 262
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A + KG P+R Y LI + R +A + L+EM +GL + + ++
Sbjct: 263 EALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILI 322
Query: 193 DGLKNCGKHDLAEKIEQLEVS 213
DGL D A + VS
Sbjct: 323 DGLLKGRNADAANGLVHEMVS 343
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 3/208 (1%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + +L+ GL G A++M + M +G P+ T+ LI +C+ G + +
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARK 254
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++Y + G+ D + L+ K G + EAF LL +DG Y+ +I G F
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
R ++ AF ++ + K P+ +YT LI + G+ +A L M G++P +
Sbjct: 315 RARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTY 374
Query: 187 CFDLVTDGLKNCGKHDLAE-KIEQLEVS 213
C++ V L CG+ L E + QLE+S
Sbjct: 375 CYNAVIKAL--CGRGLLEEGRSLQLEMS 400
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G +P +L+ GL G + A+++ +M G+ PD N+L++ CK G
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ K G + Y LI + +A +AF L N+++ P LY
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTE 178
+I+G + G+ +DA S + KG P+ Y +I +CGR G E + +EM+E
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR-GLLEEGRSLQLEMSE 401
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G G + A +++ K G L ++SLI+ + ++
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y ++ K D+ Y ILI +SKAG I++A +LL ++ G +P Y
Sbjct: 319 YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK RG ++ E+ P+ +T LI R G EA E+ + G
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+P F+ + DGL C +L E
Sbjct: 439 CSPSVATFNALIDGL--CKSGELKE 461
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 14/216 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + +L+QGL AG +E A ++++ M +G PD +N++I+ +C G
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + S D T+ ILI ++ + G++ EA + + + G +P + +
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK---------GHPPNRPVYTTLITMCGRGGRFVEAAN 171
+I G + G+ +A ++++ H NR T + G ++A
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV-----ESGSILKAYR 503
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + G +P ++++ +G G D A K+
Sbjct: 504 DLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ P +L+ + G + A+++ ++ K G P + TFN+LI+ +CKSGE
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKIL-------IPAVSKAGMIDEAFRLLHNLVEDGHNP 113
++ E + K+ S + L + ++G I +A+R L + + G +P
Sbjct: 459 LK---EARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSP 515
Query: 114 FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
Y +I G R G D A + +++KG P+ Y TLI R GR EA
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF +RG L+ GL A A ++ M+K+ PD+ + LI+ + K+G++E
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ S+ G D Y +I A+ G+++E L + E P + +I
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
R G +A F+EI+ G P+ + LI + G EA L +M
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE--MYYSVC 72
+L+ G E A + +M + PD+ T+N ++ + + EV F + +Y +
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE-EVFFMLAFAVYNEML 190
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
K ++ T+ IL+ + K G +A ++ ++ G +P Y +I G +RG D
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA F E++ G+ P+ + L+ + GR VEA L + G R + +
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 193 DGLKNCGKHDLA 204
DGL ++ A
Sbjct: 311 DGLFRARRYTQA 322
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
Q + ++ G D F LI K G E VE + + + DV TY +++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL--- 169
Query: 91 SKAGMIDEAFRLLHNLVEDGH---NPFPSLYA--PIIKGAFRRGQFDDAFCFFSEIKIKG 145
+ M +E F +L V + N P+LY ++ G +++G+ DA F ++ +G
Sbjct: 170 -RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 146 HPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PNR YT LI+ +C RG +A EM G P S + + DG G+ +
Sbjct: 229 ISPNRVTYTILISGLCQRGSA-DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR--MV 285
Query: 205 EKIEQLEV 212
E E L +
Sbjct: 286 EAFELLRL 293
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
++ +G + A + + GS PD+ ++N LI C++G+++ +++ + G D
Sbjct: 492 MVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPD 551
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
TY LI + + G +EAF+L + +D P++Y ++ + R+ + AF +
Sbjct: 552 SVTYNTLINGLHRVGREEEAFKLFY--AKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLW 608
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+D G +P + ++L+ G AG ++ A +++N + +G PD T+N+LI + + G
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E +++Y+ V Y+ L+ + + AF L ++ + A
Sbjct: 569 EEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKK-ISCLDDETANE 625
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I+ F+ G+ + A E+ + YT + + GRF EA + E +
Sbjct: 626 IEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKI 685
Query: 182 --TPISRCFDLVTDGLKNCGKHDLAEKIE 208
TP S C L+ GL C + L IE
Sbjct: 686 LVTPPS-CVKLI-HGL--CKREQLDAAIE 710
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M G P + LV AG L+ A+++V+ M ++G + P+L TFNS++ +CK+G
Sbjct: 36 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 95
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E +++ + + G DV +Y L+ K G + E+ + + + G P +
Sbjct: 96 RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 155
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G + A ++++ +G N +T LI + G +A + EM +
Sbjct: 156 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 215
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
G+ P C++ + +G G+ DLA E I ++E
Sbjct: 216 GIQPSVVCYNALINGYCKLGRMDLARELIREME 248
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL AG +E A+++ ++M+++G PD+ ++N+L+ CK G + + ++ + + G
Sbjct: 87 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV T+ LI A KAG +++A L+ + E G + +I G ++G DDA
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E++ G P+ Y LI + GR A + EM + P + + G
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266
Query: 196 KNCGKHDLAEKIEQ 209
G D A ++ Q
Sbjct: 267 CKVGNLDSAFQLNQ 280
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G+L+ A V +M K G P + +N+LI CK G ++ E+ +
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +I K G +D AF+L +++ G P Y+ +I+G + +DA
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + G P+ YTTLI + G +A + EM G+ P + ++ +GL
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 371
Query: 196 KNCGKHDLAEKI 207
+ A ++
Sbjct: 372 SKSARTKEAHRL 383
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++LV+ L G LE A +V M G P+ T+N+L+ C++GE
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + + + G+ ++ T+ ++ + KAG ++ A ++ +V +G P Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + G ++ FSE+ +G P+ +T+LI + G +A + +M E
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 180 GLTPISRCFDLVTDG 194
GL F + DG
Sbjct: 181 GLRMNEVTFTALIDG 195
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G G ++ A++++ +M + PD+ T++++I CK G
Sbjct: 212 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 271
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G D TY LI + + +++A L N+++ G P Y
Sbjct: 272 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 331
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + G + A E+ KG P+ Y+ LI + R EA L ++
Sbjct: 332 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 387
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ G G L + + ++M ++G PD+ TF SLI CK+G
Sbjct: 107 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 166
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + + G + T+ LI K G +D+A + + + G P Y
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A E++ K P+ Y+T+I+ + G A +M + G
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P + + + GL C + L + E E L+
Sbjct: 287 VLPDAITYSSLIRGL--CEEKRLNDACELFENMLQ 319
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L++GL L A ++ M++ G PD T+ +LI+ CK G
Sbjct: 282 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
VE + ++ + + G DV TY +LI +SK+ EA RLL L + P
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 401
Query: 114 ---------FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
F S+ A ++KG +G +A + + + + VY+ LI RGG
Sbjct: 402 LMLCCSKAEFKSVVA-LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 460
Query: 165 RFVEAANYLMEMTEMGLTPIS 185
+A ++ +M G +P S
Sbjct: 461 NVRKALSFHKQMLRSGFSPNS 481
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ AG LE A +V +M ++G + TF +LI+ CK G
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K G V Y LI K G +D A L+ + P Y+
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G D AF ++ KG P+ Y++LI R +A M ++G
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Query: 181 LTPISRCFDLVTDG 194
+ P + + DG
Sbjct: 322 VQPDEFTYTTLIDG 335
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++ G G L+SA Q+ KM+K+G PD T++SLI +C+
Sbjct: 247 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ ++ +LG D TY LI K G +++A L ++ G P Y+
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+I G + + +A ++ + P+ Y L+ C +
Sbjct: 367 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 409
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 15/191 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G G +E A + ++MI++G PD+ T++ LI + KS
Sbjct: 317 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA---------------GMIDEAFRLLHN 105
+ + + + D Y L+ SKA G++ EA ++ +
Sbjct: 377 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 436
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+++ S+Y+ +I G R G A F ++ G PN +L+ G
Sbjct: 437 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 496
Query: 166 FVEAANYLMEM 176
VEA N + ++
Sbjct: 497 VVEADNAIQDL 507
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ P + ++L+ G +E+A ++++ M+ G DPD+ T+NSL+ +CK+ +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E Y ++ + G ++ T+ IL+ ++ + +DEA LL + NP +
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 121 IIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G D A+ F ++ + + P Y +I A EM +
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK--IEQLE 211
L P + L+ DG G +L K +E +E
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 35/219 (15%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY------- 68
L++ L G ++ +++++K+IK+G P+L T+N I+ +C+ GE++ V M
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 69 ------------YSVCK----------LGSCA------DVSTYKILIPAVSKAGMIDEAF 100
Y +CK LG D TY LI K GM+ A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 101 RLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
R++ + V +G P Y +I G G+ + A F+E KG PN +Y TLI
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
G +EAA EM+E GL P + F+++ +GL G
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + L++GL N G + A Q+ N+M ++G P+++TFN L+ +CK G V
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D+ T+ ILI S ++ A +L ++++G +P Y ++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + +F+D + + KG PN + L+ R + EA L EM + P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 184 ISRCFDLVTDGL-KNC---GKHDLAEKIEQ 209
+ F + DG KN G + L K+E+
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V +V G + ++ KM+ G L TFN L+ +CK G+
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ C ++ V K G ++ TY + I + + G +D A R++ L+E G P Y
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F +A + ++ +G P+ Y TLI +GG A + + G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL + G+ + A
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRA 375
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + L+ G G ++ A+++V + G PD T+ SLI+ +C GE
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ G +V Y LI +S GMI EA +L + + E G P +
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G DA + KG+ P+ + LI + A L M + G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+ P ++ + +GL K +
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFE 513
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE------- 60
P V + ++ L+++GY + A ++ +M +G PD+ +F +++ CK+
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 61 -------------VEFCV---------------EMYYSVCKLGSCADVSTYKILIPAVSK 92
V +C E++ + G +ST+ L+ + K
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G + E +LL +++ G P Y I+G +RG+ D A + +G P+
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y LI + +F EA YL +M GL P S ++ + G G LAE+I
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + ++L++ L L+ A ++ +M + +PD TF +LI+ CK+G+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 61 VEFCVEMYYSVCKLGSCADVS----TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
++ ++ K+ VS TY I+I A ++ + A +L +V+ P
Sbjct: 582 LDGAYTLFR---KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y ++ G + G + + F E+ G P+ +I R EAA + M
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 177 TEMGLTP 183
+ GL P
Sbjct: 699 VQKGLVP 705
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P L+ GL + G A + N+ + +G P++ +N+LI+ + G +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G +V T+ IL+ + K G + +A L+ ++ G+ P + +I G
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + ++A + G P+ Y +L+ + +F + M E G P
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLE 211
F+++ + L C L E + LE
Sbjct: 531 LFTFNILLESL--CRYRKLDEALGLLE 555
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+QG G L AK+++++++ G D+ F+S+I +CK G
Sbjct: 455 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 514
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ +G D Y +L+ G +++A R+ +V G P +Y
Sbjct: 515 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 574
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F E+ +G P+ +Y+ +I + GR V A EMTE G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESG 634
Query: 181 LTPISRCFDLVTDGL 195
+ +++V GL
Sbjct: 635 IAMDICTYNIVLRGL 649
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++ L G ++ A + N+MI QG PD +N LI+ C G
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 479
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D+ + +I + K G + +A + V G +P +Y+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 539
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F + G PN VY TL+ + GR E + EM + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 599
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + + ++ DGL G+
Sbjct: 600 IKPSTILYSIIIDGLFQAGR 619
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP V ++++ G G L + + M+ G PD TFN LI+ G
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G DV TY+ +I A+ + G +D+A + +++ G P Y
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A SEI G + ++++I + GR ++A N +G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + + ++ DG GK + A ++ VS
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L+ L G ++ A+ + + M +G +PD+ ++N ++ G + ++
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDL 381
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D T+ +LI A + GM+D+A + + + + G P Y +I R
Sbjct: 382 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DDA F+++ +G P++ Y LI G ++A + E+ G+
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSL 214
F + + L G+ A+ I L V++
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNV 528
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + L+ G + G + A ++ +M + PD+ T + L+ ++CK G+
Sbjct: 280 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ ++ G DV +Y I++ + G + + L ++ DG P +
Sbjct: 340 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNV 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK G D A F+E++ G P+ Y T+I R G+ +A +M + G
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 181 LTPISRCFDLVTDGL 195
+ P ++ + G
Sbjct: 460 VAPDKYAYNCLIQGF 474
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P +L+ G G +E A ++ + M+ G +P++ + +L+ CK G ++
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G Y I+I + +AG A H + E G Y +++G
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRG 648
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ FD+A F E++ N T+I + R EA + ++ L P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 708
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ ++ + N K L E+ E + S+++
Sbjct: 709 VVTYSIM---ITNLIKEGLVEEAEDMFSSMQN 737
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKSGEVE 62
G P V +L++ L + G A ++ M + G+ P++ +N++I+ K G+V
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+++ + + G D+ TY ++ A+ KA +D+A L +V P Y +I
Sbjct: 237 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 296
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G GQ+ +A F E++ P+ + L+ + G+ EA + M G
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 183 PISRCFDLVTDGLKNCG 199
P ++++ +G G
Sbjct: 357 PDVFSYNIMLNGYATKG 373
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCKLGSCADVSTYKI 85
E A ++++ G ++ N L+E C++ + ++ + + +LG DV +Y I
Sbjct: 128 ELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 187
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ ++ G +A LL + E G P++ Y +I G F+ G + A F E+
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PP+ Y +++ + +A +L +M + P + ++ + G + G+
Sbjct: 248 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 204 AEKI 207
A ++
Sbjct: 308 AVRV 311
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 78/195 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V LV G G ++ + +M+++G P ++ +I+ + ++G
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ TY I++ + K DEA L L
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ + ++A F+ I P+ Y+ +IT + G EA + M G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 181 LTPISRCFDLVTDGL 195
P SR + V L
Sbjct: 740 CEPNSRLLNHVVREL 754
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/141 (18%), Positives = 67/141 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G + +++++GL + A + ++ ++ T N++I+ + ++
Sbjct: 630 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 689
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ S+ + V TY I+I + K G+++EA + ++ G P L
Sbjct: 690 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 749
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
+++ ++ + A + S+I
Sbjct: 750 VVRELLKKNEIVRAGAYLSKI 770
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G +AG + A ++N M K+G +P++ + LI+ +C++ +
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 61 -VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + ++ + + G AD+ TY LI K GMID+ + +L ++ + G P Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ ++ QF++ ++K +G P+ +Y +I + + G EA EM
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 180 GLTPISRCFDLVTDGLKNCG 199
GL+P F ++ +G + G
Sbjct: 442 GLSPGVDTFVIMINGFTSQG 461
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNA-GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M +GF P V +L+Q L ++ A ++ +M + G + D+ T+ +LI CK G
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + + K G TY ++ A K +E L+ + G +P +Y
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ A + G+ +A ++E++ G P + +I G +EA N+ EM
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Query: 180 GL 181
G+
Sbjct: 477 GI 478
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ +A ++ A +++++M K G +PD F L++ +CK+G V+ +++ + +
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-RE 230
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
++ + L+ + G + EA +L + E G P ++ ++ G G+ DA
Sbjct: 231 KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 290
Query: 135 FCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMG 180
+ ++++ +G PN YT LI +C R EA +EM G
Sbjct: 291 YDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 39 QGSDPDL---ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
+ ++P+L E F L+ + V+ VE+ + K G D + L+ A+ K G
Sbjct: 158 RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGS 217
Query: 96 IDEAFRLLHNLVEDGHNPFP---SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
+ EA ++ ED FP + ++ G R G+ +A ++K G P+ V
Sbjct: 218 VKEASKVF----EDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVV 273
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+T L++ G+ +A + + +M + G P C+ ++ L
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG--SDPDLETFNSLIETICKS 58
M G +P V +++ G + G+L A +M+ +G S P T SL+ + +
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRD 497
Query: 59 GEVEFCVEMYYSVC-KLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
++E +++ + K SC +VS + I I A+ G + EA +++E P P+
Sbjct: 498 DKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPN 557
Query: 117 LYAPIIKG 124
YA ++KG
Sbjct: 558 TYAKLMKG 565
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + + G + + Q+ ++ +G D T+N LI+ +CK+G
Sbjct: 468 MLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGN 527
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D TY LI A + G + EA + ++++ DG P Y
Sbjct: 528 LKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTV 587
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II RRG A+ +F ++ +G PN Y LI R GR A + EM E G
Sbjct: 588 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERG 647
Query: 181 LTPISRCFDLVTDG 194
L P + L+ DG
Sbjct: 648 LVPNKYTYTLLIDG 661
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L++G N L ++ ++M+ +G PD +N+ I G+
Sbjct: 433 MVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGD 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +D TY ILI + K G + +A L+ ++ +G P Y
Sbjct: 493 ISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTC 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RG +A FF+++ G PP+ YT +I R G A + +M E G
Sbjct: 553 LIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEG 612
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK--IEQLEVSL 214
+ P ++++ L G+ LA + E LE L
Sbjct: 613 VEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGL 648
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + ++ GLL +G +E+A+ +M G PD+ T+NSL+ CK+G
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGN 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + G V TY ILI + G ++EA RL +VE G P Y
Sbjct: 388 QKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTI 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG+ FF E+ KG P+ Y T I G ++ + G
Sbjct: 448 LMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEG 507
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + ++++ DGL G AE++
Sbjct: 508 ISSDTVTYNILIDGLCKTGNLKDAEEL 534
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL G+++ + +M +G P + T+N++I + +SG++E + + +G
Sbjct: 308 LITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMG 367
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY L+ KAG EA L +L G P Y +I G R G ++A
Sbjct: 368 LLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEAR 427
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ +G P+ YT L+ + EM GL P CF T
Sbjct: 428 RLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRP--DCFAYNTRIC 485
Query: 196 KNCGKHDLAEKIEQLEV 212
D+++ + EV
Sbjct: 486 AEITLGDISKSFQLREV 502
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 70/183 (38%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G AG + A + + + G P + T+N LI+ C+ G+
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G DV TY IL+ + ++ G P Y
Sbjct: 423 LEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNT 482
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G +F I ++G + Y LI + G +A +M+M G
Sbjct: 483 RICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNG 542
Query: 181 LTP 183
L P
Sbjct: 543 LQP 545
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 101/245 (41%), Gaps = 36/245 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M+ G P V+ + +++ L +A + + +M++ G +P + T+N+L+++ K G
Sbjct: 187 MASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGR 246
Query: 60 ---------EVEF----CV--EMYYSVC--------------------KLGSCADVSTYK 84
E+E C+ ++ Y+V +L A TY
Sbjct: 247 KDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYN 306
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
LI + G + + L + +G P Y +I G + GQ + A F E++
Sbjct: 307 PLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAM 366
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G P+ Y +L+ + G EA ++ GL P ++++ DG G + A
Sbjct: 367 GLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA 426
Query: 205 EKIEQ 209
++++
Sbjct: 427 RRLKE 431
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M G PD++ N ++ + + + ++ + +LG + TY L+ + SK G
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245
Query: 95 MIDEAFRLLHNLVEDGHNPFPS--LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
D+ LL + G + P+ Y +I G R+G ++A E+++ +
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSF-T 304
Query: 153 YTTLIT-MCGRGGRFVEAANYL-MEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
Y LIT + RG FV+ + L +EM G+ P ++ + GL G+ + A+
Sbjct: 305 YNPLITGLLARG--FVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQ 357
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P V + L+ G N G LE A + +M G P++ T+ LI CKS +++
Sbjct: 206 EGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDR 265
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ + G +V TY LI G +D A+RLL ++ G P + +I
Sbjct: 266 AMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLID 325
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + +A + KG N VYT+LI + GRF A + + G P
Sbjct: 326 ALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVP 385
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ + + DGL C + +L+E + L+
Sbjct: 386 DAHTYSSLIDGL--CRQKELSEAMLVLD 411
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +V GL AG A+ +++ + +G +P++ +N+LI+ C G+
Sbjct: 168 MQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGD 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V+++ + G +V TY LI K+ +D A L +V+ G P Y
Sbjct: 228 LELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTA 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G GQ D A+ ++ G PN + LI + R EA L + + G
Sbjct: 288 LIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKG 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ + + DGL G+ A+++ Q VS
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
+R L+ AG L ++K+ ++ +++ G PD + S + C++G + ++
Sbjct: 72 LRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFV 131
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ G TY L+ + AGM+ EA + + DG P P +YA ++ G G
Sbjct: 132 LMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAG 191
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ +A S+ +G PN VY LI G A + M G +P R +
Sbjct: 192 RTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYT 251
Query: 190 LVTDGLKNCGKHDLA 204
+ G K D A
Sbjct: 252 ELISGFCKSRKLDRA 266
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V L+QG + G L+ A +++ M G P+ T + LI+ +CK
Sbjct: 273 MVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHER 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + S+ + G + Y LI + KAG A RL+ LV G P Y+
Sbjct: 333 VGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSS 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G R+ + +A ++ KG P+ YT +I
Sbjct: 393 LIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIII 429
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +L+ L + A+ ++ +I++G + + SLI+ +CK+G
Sbjct: 308 MENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ G D TY LI + + + EA +L +++E G P P Y
Sbjct: 368 FAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTI 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II R D + ++ G P+ YT + GR +A + ++ M + G
Sbjct: 428 IIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHG 487
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
+ P +LVT CG +L
Sbjct: 488 VCP-----NLVTYNALICGYANL 505
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V G AG L A ++ M +G T+ +L+ +C +G V
Sbjct: 102 GFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREA 161
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G D Y ++ + AG EA LL + + +G P +Y +I G
Sbjct: 162 MSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G + A F + + G PN YT LI+ + + A M + GL P
Sbjct: 222 YCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + G + G+ D A ++ Q
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRLLQ 306
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P +++ L+ + +K++++KMI G PD+ T+ + + C G
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGR 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E M + G C ++ TY LI + G+ +AF ++V +G P Y
Sbjct: 473 MEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTV 532
Query: 121 IIKGAFRRGQFDD------AFCFFSEIK---------IKGHPPNR-PVYTTLITMCGRGG 164
+++ ++ ++ + +E+K +K P+ +Y +T R
Sbjct: 533 LLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVD 592
Query: 165 RFVEAANYLMEMTEMGLTP 183
R EA L+EM LTP
Sbjct: 593 RLDEAKILLIEMQSANLTP 611
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 68/180 (37%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG + A + M G PD + +++ +C +G + G
Sbjct: 148 LLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG 207
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V Y LI G ++ A + + +G +P Y +I G + + D A
Sbjct: 208 FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAM 267
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FS + G PN YT LI G+ A L M GL P ++ D L
Sbjct: 268 MLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDAL 327
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG +A +++ ++ QG PD T++SLI+ +C+ E+ + + + + G
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
TY I+I + + D + ++L ++ G P Y ++ G+ +DA
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G PN Y LI G +A + M G P
Sbjct: 478 HMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKP 525
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +GF P L+ GL L A +++ M+++G P T+ +I+ + +
Sbjct: 378 LVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVG 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G DV TY I + + G +++A ++ ++V+ G P Y
Sbjct: 438 ADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNA 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+I G G AF F + G PN YT L+ +
Sbjct: 498 LICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRL 536
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A V+ M+K G P LE++ +I ++C+ G ++ +++ + + ++I
Sbjct: 629 LTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRI 688
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
LI + + G + E LL + E + P +LYA
Sbjct: 689 LIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYA 722
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKS 58
M +KG V + L++GL + G ++ A ++ N M + +P++ TFN LI +CK
Sbjct: 234 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 293
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G + V+++ + K GSC ++ TY +L+ KAG I EA L +++ G P Y
Sbjct: 294 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 353
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +I G + + A F E++ G P Y TL+ + G +A + EM
Sbjct: 354 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 413
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIE--QLEVSLR 215
P F+ + DG G ++++ +E+ LR
Sbjct: 414 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 452
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + + L+ L G LE AK + +M +PD+ +FN++I+ K+G+
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+F E+ + ++G D T+ LI +SK G +DEA L +V G P +Y
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
++KG +G + ++ KG +R + +T++T
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 533
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
P V ++L+ GL G L A ++ KM+K+GS +L T+N L+ K+G+++ +
Sbjct: 276 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E++ V LG + TY ILI K M++ A L + G NP Y ++
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 395
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G + A F E+ P+ + T+I + G F M+M EMGL P +
Sbjct: 396 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 455
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
F + + L G+ D A+
Sbjct: 456 LTFSTLINRLSKLGELDEAK 475
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 37/231 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + V LV GL G + A ++N M + G PD+ T+ LI+ +CK G
Sbjct: 129 MLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGR 188
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + + G TY +L+ + K G++ +AF++L ++E G Y
Sbjct: 189 ATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNT 248
Query: 121 IIKGAFRRGQFDDAFCFFSE-------------------------------IKI------ 143
++KG +G+ D+A F+ +KI
Sbjct: 249 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 308
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
KG N Y L+ C + G+ EA ++ ++G P S + ++ DG
Sbjct: 309 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+ V L+ G N G L+ K++ ++M+ +G ++ T++ L+ +C+ G+
Sbjct: 94 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 153
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G DV TY LI + K G A LL+ +VE G P Y
Sbjct: 154 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 213
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM--TE 178
++ G + G DAF + KG + Y TL+ G+ EA M E
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P F+++ GL G+ A KI +
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 304
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G ++ A +++ M K+G D D+ + +LI C +G ++ E++ + G
Sbjct: 74 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 133
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+V TY L+ + + G EA +L+ + E G +P Y +I G + G+ A
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + KG P+ Y L++ + G ++A L M E G ++ + GL
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 253
Query: 196 KNCGKHDLAEKI 207
+ GK D A K+
Sbjct: 254 CDKGKVDEALKL 265
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P + + L+ GL A L+ A ++ +M G P+ T +L++ +CK G
Sbjct: 24 MGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGR 83
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ ++ K G ADV Y LI G +D L ++ G + Y+
Sbjct: 84 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 143
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R GQ+ +A + + G P+ YT LI + GR A + L M E G
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203
Query: 181 LTPISRCFDLVTDGL 195
P + ++++ GL
Sbjct: 204 EEPSNVTYNVLLSGL 218
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++++GL G + A ++ +M ++ PD+ ++N+LI +CK+ +++ V + +
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + T L+ + K G +DEA LL + + G + LY +I G G D
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F E+ KG N Y+ L+ R G++ EA L M E G+ P + + D
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 194 GLKNCGKHDLAEKIEQLEV 212
GL G+ A + L V
Sbjct: 182 GLCKDGRATHAMDLLNLMV 200
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF P +L+ G L AK + +M G +P L +N+L+ ++CK G +E
Sbjct: 343 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 402
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + D+ ++ +I KAG L +VE G P ++ +I
Sbjct: 403 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 462
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G+ D+A + G P+ VY +L+ G E N L +M G
Sbjct: 463 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520
>gi|242047058|ref|XP_002461275.1| hypothetical protein SORBIDRAFT_02g043930 [Sorghum bicolor]
gi|241924652|gb|EER97796.1| hypothetical protein SORBIDRAFT_02g043930 [Sorghum bicolor]
Length = 334
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC-KSGE 60
+ G P V + L+ L G A+++ + M+ G P+ +FN L++ ++ E
Sbjct: 88 TSAGVPPSVLCYNTLLNALAEDGRAVEARRVFDGMLAAGVAPNASSFNILVKLYAWRTAE 147
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G DV T+ L+ + +AG +DEA+ +L ++++G P Y P
Sbjct: 148 FHLAYDEIHAMRRHGLVPDVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTP 207
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I++G +G+ ++A ++ G PPN Y LI RF E L E+ G
Sbjct: 208 IVQGYCCQGRIEEATNLIGFMEEAGCPPNAVTYNVLIRALCDDARFDEVKQVLAEIESKG 267
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + +++ D L G E ++Q EV
Sbjct: 268 HKPSTVTYNIYMDALSKKGMAK--EALKQFEV 297
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V LV GL AG L+ A +++ M+++G P + T+ +++ C G
Sbjct: 158 MRRHGLVPDVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCCQGR 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G + TY +LI A+ DE ++L + GH P Y
Sbjct: 218 IEEATNLIGFMEEAGCPPNAVTYNVLIRALCDDARFDEVKQVLAEIESKGHKPSTVTYNI 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIK 142
+ ++G +A F ++
Sbjct: 278 YMDALSKKGMAKEALKQFEVLQ 299
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 93/180 (51%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF + + L+ GL+ G+++ A ++ N++ + G + ++ T N ++ +CK +++
Sbjct: 144 KGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDD 203
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G AD+ TY LI A + G++ EAF +++++ G P Y +I
Sbjct: 204 VKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVIN 263
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G++ A F+E+ G P+ Y TL+ R F+EA + +M G++P
Sbjct: 264 GLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSP 323
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV G N G++ A ++ ++MI++G P L T N++I+ C+SG++ E +
Sbjct: 505 ILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISE 564
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D TY LI K +D+AF L++ + G P Y I+ G R+G+ +A
Sbjct: 565 GVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEA 624
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +G P+R YTTLI EA + EM + G P
Sbjct: 625 ELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + + L+ G L A +++N M +G P L T+N++I +CK G
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +G D +TY L+ + EA + +++ G +P ++
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + R G D A +F ++K G P+ +YT LI R G EA +M E G
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
++ + +GL C K LA+
Sbjct: 391 CALDVVAYNTILNGL--CKKKLLAD 413
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G G + A + M ++ PD+ T+N LI+ CK+ E
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + + +Y IL+ G + EAFRL ++ G P
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG R G A F ++ +G P+ Y TLI +G +A + +M G
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++++ +G G+ AE I
Sbjct: 601 LQPDVVTYNVILNGFCRQGRMQEAELI 627
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + +++G +G L A + + KMI +G PD T+N+LI K
Sbjct: 526 MIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKG-- 583
Query: 61 VEFCVEMYYSVCKL---GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
E+ + ++ + K+ G DV TY +++ + G + EA +L ++E G +P S
Sbjct: 584 -EYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRST 642
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
Y +I G + +AF F E+ +G P+
Sbjct: 643 YTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G V + ++ GL L A + ++M+++G PD TF +LI CK G
Sbjct: 386 MLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGN 445
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + D+ TY ILI K +++A L + ++ P YA
Sbjct: 446 MGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAI 505
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G +AF + E+ KG P T+I R G +A +L +M G
Sbjct: 506 LVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEG 565
Query: 181 LTPISRCFDLVTDGL 195
+ P S ++ + +G
Sbjct: 566 VGPDSITYNTLINGF 580
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P + + ++ GL G AK + N+M+ G PD T+N+L+ C++
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + G D+ ++ LI S+ G +D+A ++ G P +Y
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G +A ++ +G + Y T++ + +A EM E G
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 181 LTP 183
+ P
Sbjct: 426 VVP 428
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G V +++V L ++ K + M ++G D+ T+N+LI C+ G
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ S+ G + TY +I + K G A + + ++ G +P + Y
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + R F +A FS++ +G P+ +++LI + R G +A Y +M G
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + + ++ +G C ++E +E
Sbjct: 356 LVPDNVIYTILINGY--CRNGMMSEALE 381
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 77/199 (38%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + L+ G+L+ A M G PD + LI C++G
Sbjct: 316 MLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGM 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + + G DV Y ++ + K ++ +A L +VE G P +
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A F + K P+ Y LI + +A EM
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P + ++ +G N G
Sbjct: 496 IFPNHISYAILVNGYCNLG 514
>gi|296087908|emb|CBI35191.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ G ++ A + +M +Q P+ T+N+LI +C G
Sbjct: 1 MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G D+ TY+IL+ + K +D+A LL + +P +Y
Sbjct: 61 LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ +DA FS + KG PN Y + + G EA MEM E
Sbjct: 121 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 180
Query: 181 LTPISRCFDLVTDG-LKNCGKHDLAEKIEQLE 211
+ ++ +T G L+N ++ + I+ LE
Sbjct: 181 CSADGCTYNTITQGFLRN---NETSRAIQLLE 209
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + L+ GL + G L+ A + +M+ G PDL T+ L++ +CK+
Sbjct: 36 MCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCH 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ D+ Y I+I + +AG +++A L NL G P Y
Sbjct: 96 LDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNI 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G +RG D+A F E+ + Y T+ R A L EM G
Sbjct: 156 MTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 215
Query: 181 LT 182
+
Sbjct: 216 FS 217
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L+ L +L+ A ++ + DPD++ + +I+ +C++GE+E ++
Sbjct: 78 PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDL 137
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ G +V TY I+ + K G++DEA +L + E+ + Y I +G R
Sbjct: 138 FSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLR 197
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ A E+ +G + T L+ M G
Sbjct: 198 NNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 234
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P V +++ GL G L+ A ++ +M + D T+N++ + ++ E
Sbjct: 141 LSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNE 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
+++ + G DVST +L+ +S G+ ++L V+
Sbjct: 201 TSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 248
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF L++ + A +K+ K G P+L ++S+I +CK G
Sbjct: 857 MMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGS 916
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DGHNPFPSLYA 119
V+ E+ + K G +V T+ LI + K G + AFRL L+ D + P Y
Sbjct: 917 VKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYT 976
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + A F +K +G PN YTTLI + G F +A + M+
Sbjct: 977 AMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNE 1036
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + ++ + DGL G+ + A K+
Sbjct: 1037 GFFPNTCTYNSIVDGLCKRGRAEEAFKL 1064
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P ++ G G + A + + +M+++G D T +I C+
Sbjct: 822 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 881
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V V ++ V K+G ++ Y +I + K G + +AF LL +V++G P +
Sbjct: 882 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941
Query: 121 IIKGAFRRGQFDDAF-CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G ++G + AF F I+ + PN YT +I+ + + A M E
Sbjct: 942 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
GL P + + + DG +C + ++ E +E+
Sbjct: 1002 GLVPNTNTYTTLIDG--HCKAGNFSKAYELMEL 1032
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 6/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++GF P + +V GL G E A +++N + + D T+ LI CK +
Sbjct: 1033 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRAD 1092
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K+G D+ Y LI A + M+ ++ +L +++ G P Y
Sbjct: 1093 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTS 1152
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + A FF ++ G P+ Y LI+ + R EA M + G
Sbjct: 1153 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 1212
Query: 181 LTP--ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L+P ++R VT + C D A + LE
Sbjct: 1213 LSPCEVTR----VTLTYEYCKTEDFASAMVILE 1241
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+ P V ++ G L A+ + +M +QG P+ T+ +LI+ CK+G
Sbjct: 967 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 1026
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + G + TY ++ + K G +EAF+LL+ ++ Y +I
Sbjct: 1027 YELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE 1086
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+R + A F +++ G P+ +YTTLI R ++ E+ ++GL P
Sbjct: 1087 QCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 1146
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + G K LA K Q
Sbjct: 1147 KETYTSMICGYCREKKVSLAVKFFQ 1171
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L+ A M+ M QG N +I + VE+ ++ + G D TY
Sbjct: 775 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
K +I + G + EA R + ++E G + II + + A FF ++
Sbjct: 835 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G PN Y+++I+ + G +A L EM + G P
Sbjct: 895 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 934
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 82/154 (53%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P V ++L+ G +G LE ++++ M+++G P+ T+NSLI+ C
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y +C G D +TY ILI KA + EA+ L ++V G N S Y
Sbjct: 519 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 578
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+IKG ++R +F +A F +++ +G +R +Y
Sbjct: 579 LIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P ++ GL G + A ++ ++M+ + +PD T+ +LI+ CK G+
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + ++G ++ TY L + K G +D A LLH + G Y
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G D A ++++ G P+ YTTL+ + V A L +M +
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F+++ +G G + EK+
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
E +++ +M +G P+ T+N +I +CK+G+V + + G D Y L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
I K G + A+RL + + +P Y +I G + G+ +A F E+ K
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P+ YT LI + G+ EA + +M +MGLTP + + DGL CG+ D A +
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 207 I 207
+
Sbjct: 385 L 385
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ L G + A++++ +MI +G PD + +LI+ CK G
Sbjct: 214 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 273
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + K D TY +I + + G + EA +L H +V P Y
Sbjct: 274 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +AF +++ G PN YT L + G A L EM G
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
L ++ + +GL G D A K+ + +EV+
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 427
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L GL G +++A +++++M ++G + ++ T+NSL+ +CK+G
Sbjct: 354 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 413
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V++ + G D TY L+ A K+ + A LL +++ P +
Sbjct: 414 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 473
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + KG PN Y +LI C R Y M
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY-RGMCAK 532
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P ++++ G +C ++ E
Sbjct: 533 GVVPDGNTYNILIKG--HCKARNMKE 556
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G + SA ++ ++M K+ PD T+ ++I +C++G
Sbjct: 249 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 308
Query: 61 VEFCVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V ++++ VCK D TY LI K G + EAF L + +++ G P Y
Sbjct: 309 VMEADKLFHEMVCKRLE-PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYT 367
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ G + G+ D A E+ KG N Y +L+ + G +A + +M
Sbjct: 368 ALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 427
Query: 180 GLTPISRCFDLVTDG 194
G P + + + D
Sbjct: 428 GFHPDAVTYTTLMDA 442
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF P +++GL A E +++ +M+++ P+ TF+ L+ C+ G
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ + G A+ + I+I + K G +D+AF+ L+N+ G +P Y
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R +++DA E+ K PPN + T I + + G +A + +M+E G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++ + +G G+ D A
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSA 444
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++LV G ++ A ++V +M++ G P+L T+N+L++ I
Sbjct: 483 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCN 542
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + + G D+ TY +I +S+ ++EA ++ H + + G P +Y
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ +R D A FF+ + G PN Y TLI E + L E+ G
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Query: 181 L 181
+
Sbjct: 663 V 663
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 90/189 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++++ G+ G ++ A++ +N++ G PD ++ ++++ +C +
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E++ + + + T+ +L+ + GM++ A ++L + G +L
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ DDAF F + + G P+ YTT++ R R+ +A L EM
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385
Query: 181 LTPISRCFD 189
P F+
Sbjct: 386 CPPNEVTFN 394
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL + G + A +++ M+ +G P + T+ L+E +CKS +E+ + G
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 210
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY ++I + + G +D+A L+ L G P Y ++KG +++D
Sbjct: 211 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ K PN + L+ RGG A L +M+ G + ++V + +
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 331 CKQGRVDDA 339
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL NA L++A +++ +M+++ P++ TFN L+ C+ G ++ +E+ + + G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY L+ ++ +EA LLH LV +G +P Y+ II R + ++A
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582
Query: 136 CFFSEIKIKGHPPNRPVYT-TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F ++ G P +Y L+ +C R A ++ M G P + + +G
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTD-GAIDFFAYMVSNGCMPNELTYITLIEG 641
Query: 195 LKN 197
L N
Sbjct: 642 LAN 644
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A ++V++ +G PD+ LI +C+ G + + + G+ DV Y
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G +D A RL+ ++ P Y PII+G RG+ +A ++ +G
Sbjct: 119 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ YT L+ + F +A L EM G TP ++++ +G+ G+ D A
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 206 K 206
+
Sbjct: 236 E 236
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +++GL A E AK+++ +M+++ P+ TFN+ I +C+ G
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G ++ TY L+ G +D A L +++ P Y
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTT 462
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + D A +E+ K PN + L++ + G EA + +M E G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 181 LTPISRCFDLVTDGLKN-CGKHDLAEKIEQL 210
TP ++ + DG+ N C + E + L
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGL 553
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 3/178 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV G G L++A++++ M PD T+ +I +C G V + + +
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY +L+ AV K+ +A +L + G P Y II G R G+ DD
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A F + + G P+ YTT++ R+ + EM E P FD++
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ + G ++ A Q +N M G PD ++ ++++ +C++ E E+ + +
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ T+ I + + G+I++A L+ + E G Y ++ G +G+ D
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F + K PN YTTL+T R AA L EM + P F+++
Sbjct: 444 ALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 500
Query: 194 GLKNCGKHDLAEKIEQLE 211
C K + E IE +E
Sbjct: 501 FF--CQKGLMDEAIELVE 516
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV-CKLGSCA 78
L G +E A ++ +M + G + ++ T+N+L+ C G V+ +E++YS+ CK
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK----P 455
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
+ TY L+ + A +D A LL +++ P + ++ ++G D+A
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
++ G PN Y TL+ EA L + G++P D+VT
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSP-----DIVT 564
>gi|255685744|gb|ACU28361.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
Length = 178
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K G +++A RLLH ++++G NP Y+ ++ G
Sbjct: 8 VFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLC 67
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 68 KNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 127
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D GK D A
Sbjct: 128 CYNALIDAFTKHGKVDEA 145
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G +E A +++++MI +G +PD+ T++ ++ +CK+G
Sbjct: 12 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGR 71
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +DEA RL + E G Y
Sbjct: 72 VEEAMD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 130
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 131 ALIDAFTKHGKVDEALALFKRME-EEEGCDQTVYTYTILISG 171
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
LN GY + MI++GS P++ + LI+ K+G VE + + + + G DV
Sbjct: 2 LNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDV 56
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
TY +++ + K G ++EA +G Y+ +I G + G+ D+A F E
Sbjct: 57 VTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 116
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ KG + Y LI + G+ EA M E
Sbjct: 117 MSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEE 154
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++E + + N++ G P ++Y +I G + G +DA + +G P+ Y+
Sbjct: 2 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSV 61
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 62 VVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERL 113
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P R + ++ + C K D+ +
Sbjct: 383 LKPDDRTYTMIINEF--CKKGDVWK 405
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 4/196 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G ++E FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGL 292
Query: 196 KNCG----KHDLAEKI 207
G HDL +++
Sbjct: 293 XKKGDLKQAHDLIDEM 308
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ Y TLI C + G A + M +
Sbjct: 288 LIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI + K G+++
Sbjct: 241 KGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 AHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KFTYXTLIDGC--CKEGDLDTAFEH 339
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 308 MSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G L G LESA+Q+V +M+ G P+ + L+E+ KS +
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + S+ G D Y ILI +S +G ++ AFR+L + ++G P +Y+
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + AF E+ KG PN Y LI + G A N + G
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707
Query: 181 LTPISRCFDLVTDG 194
L P + + DG
Sbjct: 708 LVPNCVTYTSLIDG 721
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G R +L+ L ++G +E+A ++++ + K GS PD+ ++SLI +CK+ +
Sbjct: 598 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 657
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + K G ++ Y LI + K+G I A + ++++ G P Y
Sbjct: 658 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 717
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G +AF ++E+ G P+ VY+ L T C G +A + EM G
Sbjct: 718 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
IS F+ + DG C + + E ++ L V
Sbjct: 778 HASIS-SFNNLVDGF--CKRGKMQETLKLLHV 806
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ GL + AK ++++M P++ + +LI+ + G
Sbjct: 283 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + G + TY L+ + K G +D A LL +V D H P Y
Sbjct: 343 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 402
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G FR DAF SE++ G PN Y+ +I + G +A++ L EMT G
Sbjct: 403 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 462
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + G G LA +I
Sbjct: 463 LKPNAFVYAPLISGYCREGNVSLACEI 489
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D LV+GL G ++ A ++ +M++ PD T+N +IE +
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G +V TY I+I + ++G ++A LL + G P +YAP
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 472
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A F ++ P+ Y +LI + GR E+ Y +M E G
Sbjct: 473 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P + + G G + AE++ Q
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQ 561
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG +P + + L+ GL +G + A+ + N ++ +G P+ T+ SLI+ CK G+
Sbjct: 668 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 727
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + G D Y +L S AG +++A L+ + GH S +
Sbjct: 728 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-FNN 786
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +RG+ + I +G PN +I+ G+ E +E+ +
Sbjct: 787 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT 846
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+R F + + N GK
Sbjct: 847 SESAARHFSSLFMDMINQGK 866
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V +++ GL +G E A ++ +M +G P+ + LI C+ G
Sbjct: 423 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 482
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + K+ D+ Y LI +SK G ++E+ + + E G P Y+
Sbjct: 483 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 542
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A + G PN +Y L+ + + ++ M + G
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 602
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +R + ++ L + G + A ++
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRV 629
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++AK+++ +M ++G + T+N LI +C+SG VE + G D TY
Sbjct: 238 FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA 297
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + K+ +EA LL + P +YA +I G R G D+AF E+ G
Sbjct: 298 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 357
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG-LKNCGKHDLA 204
PN+ Y L+ + G+ A+ L +M P + ++L+ +G ++ K D
Sbjct: 358 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 417
Query: 205 EKIEQLE 211
+ ++E
Sbjct: 418 RLLSEME 424
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P L+ G G + A ++ +KM K PDL +NSLI + K G
Sbjct: 458 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 517
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G + TY LI K G ++ A +L+ +++ G P +Y
Sbjct: 518 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 577
Query: 121 IIKGAFR-----------------------------------RGQFDDAFCFFSEIKIKG 145
+++ F+ G + AF S I+ G
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ VY++LI+ + +A L EM++ G+ P C++ + DGL G A
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697
Query: 206 KI 207
+
Sbjct: 698 NV 699
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%)
Query: 50 SLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
S +E CK E + ++ + + G + TY +LI + ++G ++EAF ++ +
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 286
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
G P Y +I G + + ++A E+ PN VY LI R G EA
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 346
Query: 170 ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ EM G+ P +D + GL G+ D A
Sbjct: 347 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRA 381
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 7/196 (3%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L+++G + A +++++M G P++ T++ +I +C+SGE E ++ +
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA--PIIKGAFRRGQF 131
G + Y LI + G + A + + + N P LY +I G + G+
Sbjct: 461 KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV--NVLPDLYCYNSLIFGLSKVGRV 518
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+++ +F++++ +G PN Y+ LI + G A + M + GL P +
Sbjct: 519 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY--- 575
Query: 192 TDGLKNCGKHDLAEKI 207
D L++ K D EK+
Sbjct: 576 IDLLESYFKSDDIEKV 591
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 19/198 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L G +AG LE A ++ +M +G + +FN+L++ CK G+
Sbjct: 738 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGK 796
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL----VEDGHNPFPS 116
++ +++ + + G + T + +I +S+AG + E + L E F S
Sbjct: 797 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 856
Query: 117 LYA--------------PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L+ +I+ + G D A I K P Y ++ R
Sbjct: 857 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 916
Query: 163 GGRFVEAANYLMEMTEMG 180
G+ EA N L EM + G
Sbjct: 917 KGKLSEALNLLKEMDKRG 934
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+QG G L AK+++++++ G D+ F+S+I +CK G
Sbjct: 468 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 527
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ +G D Y +L+ G +++A R+ +V G P +Y
Sbjct: 528 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 587
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F E+ +G P+ +Y+ +I + GR V A EMTE G
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESG 647
Query: 181 LTPISRCFDLVTDGL 195
+ +++V GL
Sbjct: 648 IAMDICTYNIVLRGL 662
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++ L G ++ A + N+MI QG PD +N LI+ C G
Sbjct: 433 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D+ + +I + K G + +A + V G +P +Y+
Sbjct: 493 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F + G PN VY TL+ + GR E + EM + G
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 612
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + + ++ DGL G+
Sbjct: 613 IKPSTILYSIIIDGLFQAGR 632
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP V ++++ G G L + + M+ G PD TFN LI+ G
Sbjct: 363 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 422
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G DV TY+ +I A+ + G +D+A + +++ G P Y
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A SEI G + ++++I + GR ++A N +G
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + + ++ DG GK + A ++ VS
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 575
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L+ L G ++ A+ + + M +G +PD+ ++N ++ G + ++
Sbjct: 335 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDL 394
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D T+ +LI A + GM+D+A + + + + G P Y +I R
Sbjct: 395 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 454
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DDA F+++ +G P++ Y LI G ++A + E+ G+
Sbjct: 455 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 514
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSL 214
F + + L G+ A+ I L V++
Sbjct: 515 FSSIINNLCKLGRVMDAQNIFDLTVNV 541
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + L+ G + G + A ++ +M + PD+ T + L+ ++CK G+
Sbjct: 293 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 352
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ ++ G DV +Y I++ + G + + L ++ DG P +
Sbjct: 353 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNV 412
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK G D A F+E++ G P+ Y T+I R G+ +A +M + G
Sbjct: 413 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 472
Query: 181 LTPISRCFDLVTDGL 195
+ P ++ + G
Sbjct: 473 VAPDKYAYNCLIQGF 487
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P +L+ G G +E A ++ + M+ G +P++ + +L+ CK G ++
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G Y I+I + +AG A H + E G Y +++G
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 661
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ FD+A F E++ N T+I + R EA + ++ L P
Sbjct: 662 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ ++ + N K L E+ E + S+++
Sbjct: 722 VVTYSIM---ITNLIKEGLVEEAEDMFSSMQN 750
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKSGEVE 62
G P V +L++ L + G A ++ M + G+ P++ +N++I+ K G+V
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+++ + + G D+ TY ++ A+ KA +D+A L +V P Y +I
Sbjct: 250 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 309
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G GQ+ +A F E++ P+ + L+ + G+ EA + M G
Sbjct: 310 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 369
Query: 183 PISRCFDLVTDGLKNCG 199
P ++++ +G G
Sbjct: 370 PDVFSYNIMLNGYATKG 386
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCKLGSCADVSTYKI 85
E A ++++ G ++ N L+E C++ + ++ + + +LG DV +Y I
Sbjct: 141 ELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 200
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ ++ G +A LL + E G P++ Y +I G F+ G + A F E+
Sbjct: 201 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 260
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PP+ Y +++ + +A +L +M + P + ++ + G + G+
Sbjct: 261 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 320
Query: 204 AEKI 207
A ++
Sbjct: 321 AVRV 324
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 78/195 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V LV G G ++ + +M+++G P ++ +I+ + ++G
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ TY I++ + K DEA L L
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ + ++A F+ I PN Y+ +IT + G EA + M G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752
Query: 181 LTPISRCFDLVTDGL 195
P SR + V L
Sbjct: 753 CEPNSRLLNHVVREL 767
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/141 (18%), Positives = 68/141 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G + +++++GL + A + ++ ++ T N++I+ + ++
Sbjct: 643 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 702
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ S+ + +V TY I+I + K G+++EA + ++ G P L
Sbjct: 703 VEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 762
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
+++ ++ + A + S+I
Sbjct: 763 VVRELLKKNEIVRAGAYLSKI 783
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF P +++GL A E +++ +M+++ P+ TF+ L+ C+ G
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ + G A+ + I+I + K G +D+AF+ L+N+ G +P Y
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R +++DA E+ K PPN + T I + + G +A + +M+E G
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++ + +G G+ D A
Sbjct: 452 CEVNIVTYNALVNGFCVQGRVDSA 475
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++LV G ++ A ++V +M++ G P+L T+N+L++ I K
Sbjct: 514 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCN 573
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + + G D+ TY +I +S+ ++EA ++ H + + G P +Y
Sbjct: 574 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 633
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ +R D A FF+ + G PN Y TLI E + L E+ G
Sbjct: 634 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693
Query: 181 L 181
+
Sbjct: 694 V 694
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL NA L++A +++ +M+++ P++ TFN L+ C+ G ++ +E+ + + G
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY L+ ++K +EA LLH LV +G +P Y+ II R + ++A
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613
Query: 136 CFFSEIKIKGHPPNRPVYT-TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F ++ G P +Y L+ +C R A ++ M G P + + +G
Sbjct: 614 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTD-GAIDFFAYMVSNGCMPNELTYITLIEG 672
Query: 195 LKN 197
L N
Sbjct: 673 LAN 675
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 90/189 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++++ G+ G ++ A++ +N++ G PD ++ ++++ +C +
Sbjct: 237 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 296
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E++ + + + T+ +L+ + GM++ A ++L + G +L
Sbjct: 297 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 356
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ DDAF F + + G P+ YTT++ R R+ +A L EM
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416
Query: 181 LTPISRCFD 189
P F+
Sbjct: 417 CPPNEVTFN 425
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL + G + A +++ M+ +G P + T+ L+E +CKS +E+ + G
Sbjct: 182 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 241
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY ++I + + G +D+A L+ L G P Y ++KG +++D
Sbjct: 242 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 301
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ K PN + L+ RGG A L +M+ G + ++V + +
Sbjct: 302 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 361
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 362 CKQGRVDDA 370
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +++GL A E AK+++ +M+++ P+ TFN+ I +C+ G
Sbjct: 377 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 436
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G ++ TY L+ G +D A L +++ P Y
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTT 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + D A +E+ K PN + L++ + G EA + +M E G
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
TP ++ + DG+ K+C + E + L
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGL 584
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++V++ +G PD+ LI +C+ G + + + G+ DV Y L+
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ G +D A RL+ ++ P Y PII+G RG+ +A ++ +G P
Sbjct: 153 GYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
+ YT L+ + F +A L EM G TP ++++ +G+ G+ D A +
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 3/178 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV G G L++A++++ M PD T+ +I +C G V + + +
Sbjct: 148 NTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 204
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY +L+ AV K+ +A +L + G P Y II G R G+ DD
Sbjct: 205 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 264
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A F + + G P+ YTT++ R+ + EM E P FD++
Sbjct: 265 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 322
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ + G ++ A Q +N M G PD ++ ++++ +C++ E E+ + +
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ T+ I + + G+I++A L+ + E G Y ++ G +G+ D
Sbjct: 415 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 474
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F + K PN YTTL+T R AA L EM + P F+++
Sbjct: 475 ALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 531
Query: 194 GLKNCGKHDLAEKIEQLE 211
C K + E IE +E
Sbjct: 532 FF--CQKGLMDEAIELVE 547
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV-CKLGSCA 78
L G +E A ++ +M + G + ++ T+N+L+ C G V+ +E++YS+ CK
Sbjct: 431 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK----P 486
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
+ TY L+ + A +D A LL +++ P + ++ ++G D+A
Sbjct: 487 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 546
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
++ G PN Y TL+ + EA L + G++P D+VT
Sbjct: 547 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP-----DIVT 595
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKS 58
M +KG V + L++GL + G ++ A ++ N M + +P++ TFN LI +CK
Sbjct: 380 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 439
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G + V+++ + K GSC ++ TY +L+ KAG I EA L +++ G P Y
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 499
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +I G + + A F E++ G P Y TL+ + G +A + EM
Sbjct: 500 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 559
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIE--QLEVSLR 215
P F+ + DG G ++++ +E+ LR
Sbjct: 560 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 598
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + + L+ L G LE AK + +M +PD+ +FN++I+ K+G+
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+F E+ + ++G D T+ LI +SK G +DEA L +V G P +Y
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
++KG +G + ++ KG +R + +T++T
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 679
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ GL G L A ++ KM+K+GS +L T+N L+ K+G+++ +E+
Sbjct: 424 PNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMEL 483
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ V LG + TY ILI K M++ A L + G NP Y ++ +
Sbjct: 484 WKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCK 543
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G + A F E+ P+ + T+I + G F M+M EMGL P +
Sbjct: 544 EGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALT 603
Query: 188 FDLVTDGLKNCGKHDLAE 205
F + + L G+ D A+
Sbjct: 604 FSTLINRLSKLGELDEAK 621
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 37/231 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + V LV GL G + A ++N M + G PD+ T+ LI+ +CK G
Sbjct: 275 MLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGR 334
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + + G TY +L+ + K G++ +AF++L ++E G Y
Sbjct: 335 ATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNT 394
Query: 121 IIKGAFRRGQFDDAFCFFSE-------------------------------IKI------ 143
++KG +G+ D+A F+ +KI
Sbjct: 395 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 454
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
KG N Y L+ C + G+ EA ++ ++G P S + ++ DG
Sbjct: 455 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 505
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF V +++++GL G + A ++ +M ++ PD+ ++N+LI +CK+ +++
Sbjct: 138 RGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKE 197
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
V + + G + T L+ + K G +DEA LL + + G + LY +I
Sbjct: 198 AVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLIS 257
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G D F E+ KG N Y+ L+ R G++ EA L M E G+ P
Sbjct: 258 GFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP 317
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ + DGL G+ A + L V
Sbjct: 318 DVVTYTGLIDGLCKDGRATHAMDLLNLMV 346
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+ V L+ G N G L+ K++ ++M+ +G ++ T++ L+ +C+ G+
Sbjct: 240 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G DV TY LI + K G A LL+ +VE G P Y
Sbjct: 300 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM--TE 178
++ G + G DAF + KG + Y TL+ G+ EA M E
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P F+++ GL G+ A KI +
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 450
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G ++ A +++ M K+G D D+ + +LI C +G ++ E++ + G
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+V TY L+ + + G EA +L+ + E G +P Y +I G + G+ A
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + KG P+ Y L++ + G ++A L M E G ++ + GL
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399
Query: 196 KNCGKHDLAEKI 207
+ GK D A K+
Sbjct: 400 CDKGKVDEALKL 411
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P + + L+ GL A L+ A ++ +M G P+ T +L++ +CK G
Sbjct: 170 MGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGR 229
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ ++ K G ADV Y LI G +D L ++ G + Y+
Sbjct: 230 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 289
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R GQ+ +A + + G P+ YT LI + GR A + L M E G
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349
Query: 181 LTPISRCFDLVTDGL 195
P + ++++ GL
Sbjct: 350 EEPSNVTYNVLLSGL 364
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF P +L+ G L AK + +M G +P L +N+L+ ++CK G +E
Sbjct: 489 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 548
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + D+ ++ +I KAG L +VE G P ++ +I
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 608
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G+ D+A + G P+ VY +L+ G E N L +M G
Sbjct: 609 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 2/169 (1%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P T N L++ + +S +Y + + + LI + A F +
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ +++ G + ++KG R G +A E+ K P+ Y TLI +
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ EA L+EM G P S + DGL G+ D E +E LE
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD--EAMELLE 238
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 66/165 (40%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + ++LIE + + + + V K G +V I++ + + G + EA L
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ + +P Y +I G + + +A E++ G PN TTL+ +
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GR EA L M + G + + G N G D +++
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKEL 271
>gi|224576645|gb|ACN56996.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T+ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ G + Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMT 177
+I + G+ D+A F ++ + ++ VYT I + G + R EA M
Sbjct: 132 ALIDALTKHGKVDEAMTLFKRME-EEEGCDQTVYTYTILIXGMFKDHRNEEALKLWDMMI 190
Query: 178 EMGLTP 183
+ G+TP
Sbjct: 191 DKGITP 196
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 155
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + GR EA +Y G S + + DGL G+ D AE++
Sbjct: 61 XVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 199 MLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 259 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTT 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 319 LIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 378
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 379 LXPDAGTYTMIINEF--CKKGDVWK 401
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 164 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESK 223
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 224 MDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 283
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ KG P++ YTTLI C + G A + M +
Sbjct: 284 LIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQEN 343
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
+ + + GL G+ AEK+ E L V L
Sbjct: 344 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 379
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 109 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 168
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + D A
Sbjct: 169 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGAN 228
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 229 ELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 288
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 289 --CKKGDLKQ 296
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 237 KGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 296
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 297 AHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALIS 356
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
G + G+ DA E+ G P+ YT +I + G + + L EM
Sbjct: 357 GLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 192
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D A L ++ G P + +I G
Sbjct: 193 FRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDG 252
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 253 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPD 312
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + DG G D A
Sbjct: 313 KFTYTTLIDGCCKEGDLDTA 332
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 74 LITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 133
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 134 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 193
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + A EM GL P F + DG
Sbjct: 194 RLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGH 253
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 254 CKNGRVDLAMEIYKQMLS 271
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A +MI++ D + +LI +C+ G
Sbjct: 304 MSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGR 363
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+M + +G D TY ++I K G + + +LL +
Sbjct: 364 SVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +P V LV GL G +E A +++ ++ ++G P + T+N +++ CKS +
Sbjct: 348 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQ 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---L 117
V E+ G + TY IL+ +AG D+A + L L +G P P+ +
Sbjct: 408 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG-GPCPTSVAM 466
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
YA I+ R G+ DDA F+ E+ +G+ P + T++ + + +A L EM
Sbjct: 467 YAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMI 526
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ G TP D V G + +K ++L LR
Sbjct: 527 KYGHTPGPGTCDAVVSAYCRAG---MIQKADELASELR 561
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ +GF P + ++ GL AG L A + +M P T+NSLI C++G+
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGD 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + DV TY L+ A K G +D+A+ L +V + +P +
Sbjct: 303 MDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +DA EI +G PP Y ++ + + +A + + G
Sbjct: 363 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQL 210
P + ++++ G G+ D A + ++QL
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLDQL 453
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P V L+ G L+ A ++ +M+ PD+ TF SL++ +C G
Sbjct: 313 MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + + G + TY ++ K+ + +A L+ + G P Y
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH--PPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G R G+ D A + ++ +G P + +Y ++ R GR +A + EM +
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 492
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G P + F V L C H + E LE
Sbjct: 493 RGYVPAAATFATVVFAL--CKAHQPQQAHELLE 523
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG ++ A +++ KM+ PD+ T+ +L+ CK G ++ E++ +
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV T+ L+ + G +++A LL + G P Y ++ G + Q A
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAE 412
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM-TEMGLTPISRC-FDLVTD 193
++ + +G PN Y L+ C R GR +A YL ++ +E G P S + ++ D
Sbjct: 413 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 472
Query: 194 GLKNCGKHDLA 204
L G+ D A
Sbjct: 473 ALCRDGRTDDA 483
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 35/229 (15%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV GL AG L A Q++ +M+ PD T +++++C V+ E+ + G
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFR-LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
A+ TY L+ + K +DEA LL + G P Y+ +I G + G+ DA
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274
Query: 135 FCFFSEIK-----------IKGH---------------------PPNRPVYTTLITMCGR 162
F E+ I G+ P+ YTTL++ +
Sbjct: 275 VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCK 334
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
GR +A +M L+P F + DGL CG+ + + +E LE
Sbjct: 335 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL--CGEGRMEDALELLE 381
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLES-AKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M D G+ ++++GL + L +++++ +G PD N+++ +C +
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ + ++ + +LG+ + +TY LI + KA ++DEA LL ++ G NP L+
Sbjct: 61 DTTTAMALFDKMAELGA-VNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R G+ A + ++ HPP+ YT L+ + GR +A L EM
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178
Query: 180 GLTPISRCFDLVTDGL 195
P + +V L
Sbjct: 179 RHVPDNTTLTVVVQSL 194
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEV 61
+GF P ++LV G AG + A Q ++++ +G + + +++ +C+ G
Sbjct: 421 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRT 480
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ V+ Y + + G +T+ ++ A+ KA +A LL +++ GH P P +
Sbjct: 481 DDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAV 540
Query: 122 IKGAFRRGQFDDAFCFFSEIKI 143
+ R G A SE+++
Sbjct: 541 VSAYCRAGMIQKADELASELRL 562
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 82/154 (53%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P V ++L+ G +G LE ++++ M+++G P+ T+NSLI+ C
Sbjct: 559 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 618
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y +C G D +TY ILI KA + EA+ L ++V G N S Y
Sbjct: 619 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 678
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+IKG ++R +F +A F +++ +G +R +Y
Sbjct: 679 LIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ G G L+ +++ +M +G P+ T+N +I +CK+G+
Sbjct: 279 MELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D Y LI K G + A+RL + + +P Y
Sbjct: 339 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTA 398
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F E+ K P+ YT LI + G+ EA + +M +MG
Sbjct: 399 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 458
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + + DGL CG+ D A ++
Sbjct: 459 LTPNIVTYTALADGLCKCGEVDTANEL 485
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P ++ GL G + A ++ ++M+ + +PD T+ +LI+ CK G+
Sbjct: 384 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 443
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + ++G ++ TY L + K G +D A LLH + G Y
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G D A ++++ G P+ YTTL+ + V A L +M +
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F+++ +G G + EK+
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKL 590
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 3/198 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE-V 61
D G +P R D+ Q L+ AG L+ A+++ +KM+ G +++ N I + + + +
Sbjct: 177 DWGSDP--RVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGI 234
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ ++++ ++G C + ++Y I+ ++ + G + EA +LL + G P Y+ +
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + G+ E++IKG PN Y +I + + G+ EA L EM G+
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354
Query: 182 TPISRCFDLVTDGLKNCG 199
P + + DG G
Sbjct: 355 APDGVIYTTLIDGFCKLG 372
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ L G + A++++ +MI +G PD + +LI+ CK G
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + K D TY +I + + G + EA +L H +V P Y
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +AF +++ G PN YT L + G A L EM G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
L ++ + +GL G D A K+ + +EV+
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 527
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L GL G +++A +++++M ++G + ++ T+NSL+ +CK+G
Sbjct: 454 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 513
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V++ + G D TY L+ A K+ + A LL +++ P +
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 573
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + KG PN Y +LI C R Y M
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY-RGMCAK 632
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P ++++ G +C ++ E
Sbjct: 633 GVVPDGNTYNILIKG--HCKARNMKE 656
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G + SA ++ ++M K+ PD T+ ++I +C++G
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408
Query: 61 VEFCVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V ++++ VCK D TY LI K G + EAF L + +++ G P Y
Sbjct: 409 VMEADKLFHEMVCKRLE-PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYT 467
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ G + G+ D A E+ KG N Y +L+ + G +A + +M
Sbjct: 468 ALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 527
Query: 180 GLTPISRCFDLVTDG 194
G P + + + D
Sbjct: 528 GFHPDAVTYTTLMDA 542
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG + G + L+ L G +E A Q+ +M +G PD+ TFNSLI +CK+ +
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHK 497
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y+ + G A+ TY L+ A I +AF+L+ ++ G Y
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNG 557
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + G + F E+ KG P LI+ R G+ +A +L +M G
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617
Query: 181 LTPISRCFDLVTDGLKNCG 199
LTP ++ + +GL G
Sbjct: 618 LTPDIVTYNSLINGLCKMG 636
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K F P V +L+ G G LE A ++VN M +G + +N LI +CK G
Sbjct: 403 MVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGN 462
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ + G D+ T+ LI + K ++EA L H++ +G Y
Sbjct: 463 IEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNT 522
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R AF E+ +G P + Y LI + G + EM G
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P +++ GL GK + A K Q
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQ 611
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V ++++ L ++SA ++ M K G P+ + +LI +C++
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + DV T+ +I + +AG I EA +LL ++ G + Y
Sbjct: 256 VSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEM 179
++ G R GQ D+A ++I PN +Y TLI+ GRF EA + L M
Sbjct: 316 LMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIA 371
Query: 180 GLTPISRCFDLVTDGL 195
G P + F+++ DGL
Sbjct: 372 GYEPDAYTFNIMIDGL 387
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P ++++ GL+ GYL SA +++N+M+ + +P++ T+ LI CK G
Sbjct: 368 MVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGR 427
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ S+ G + Y LI A+ K G I+EA +L + G P +
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G + + ++A + ++ ++G N Y TL+
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLV 524
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV L ++ A ++V++M+ +G D T+N LI+ +CK+G VE + ++ + G
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ + ILI + + G +++A + L +++ G P Y +I G + G +A
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F++++ +G P+ Y TLI+ G F +A L + + G P
Sbjct: 643 NLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+ L+ GL G ++ A+ ++NK+ +P+ +N+LI SG E
Sbjct: 304 RGFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISGYVASGRFEE 359
Query: 64 CVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ Y+ + G D T+ I+I + K G + A LL+ +V P Y +I
Sbjct: 360 AKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILI 419
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G ++G+ ++A + + KG N Y LI + G EA EM+ G
Sbjct: 420 NGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCK 479
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P F+ + +GL C H + E +
Sbjct: 480 PDIYTFNSLINGL--CKNHKMEEAL 502
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ GL G + A + + MI +G PD+ T+NSLI +CK G
Sbjct: 578 MLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGH 637
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G D TY LI GM ++A LL+ V+ G P ++
Sbjct: 638 VQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSI 697
Query: 121 IIKGAFRR 128
+I ++
Sbjct: 698 LINYIVKK 705
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMV-NKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
NP + L+ G + +G E AK ++ N M+ G +PD TFN +I+ + K G + +
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E+ + +V TY ILI K G ++EA +++++ G + Y +I
Sbjct: 398 ELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICAL 457
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ G ++A F E+ KG P+ + +LI + + EA + +M
Sbjct: 458 CKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 4/155 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L G +E + +M+ +G P + + N LI +C++G+V ++ + G
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY LI + K G + EA L + L +G P Y +I G F+DA
Sbjct: 618 LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDAC 677
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGR----GGRF 166
+ G PN ++ LI + G RF
Sbjct: 678 LLLYKGVDSGFIPNEVTWSILINYIVKKIPWGARF 712
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 68/166 (40%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
DP +++N +++ + ++Y + G V T+ +++ A+ +D A
Sbjct: 167 DPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACS 226
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
LL ++ + G P +Y +I + +A ++ + P+ + +I
Sbjct: 227 LLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLC 286
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R GR EAA L M G + + + + GL G+ D A +
Sbjct: 287 RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G V +LLV L G A ++V +M +G D+ T+N LI CK G
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGN 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ ++ + G A V TY LI A+SK G + E +L V G P LY
Sbjct: 343 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 402
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D AF E++ K P+ Y TL+ GR EA + EMT+ G
Sbjct: 403 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 462
Query: 181 LTPISRCFDLVT 192
+ P DLVT
Sbjct: 463 IQP-----DLVT 469
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G V L+ L G ++ ++ ++ +++G PDL +N+LI + SG
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + K D TY L+ + G +DEA +L+ + + G P Y
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G DA +E+ KG P Y LI + G+ +A N + EM E G
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532
Query: 181 LTPISRCFDLVTDGL 195
+TP + + +GL
Sbjct: 533 ITPDDSTYISLIEGL 547
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V ++L+ G G ++ A ++ M ++G + T+ SLI + K G+
Sbjct: 318 MGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 377
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + G D+ Y LI + S +G ID AF ++ + + P Y
Sbjct: 378 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 437
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G G+ D+A E+ +G P+ Y TLI+ G +A EM G
Sbjct: 438 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 497
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL G+ D AE +
Sbjct: 498 FNPTLLTYNALIQGLCKNGQGDDAENM 524
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G + G L++A ++M+++G + T+N L+ + G E+ + G
Sbjct: 263 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY ILI K G + +A + N+ G Y +I ++GQ +
Sbjct: 323 LALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 382
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E +G P+ +Y LI G A + EM + + P ++ + GL
Sbjct: 383 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 442
Query: 196 KNCGKHDLAEKI 207
G+ D A K+
Sbjct: 443 CLLGRVDEARKL 454
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ G G ++ A ++ ++M+ +G P+ +N+LI C G+++ + + +
Sbjct: 227 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 286
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V+TY +L+ A+ G EA+ L+ + G Y +I G + G A
Sbjct: 287 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKA 346
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + +G YT+LI + G+ E E G+ P ++ + +
Sbjct: 347 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 406
Query: 195 LKNCGKHDLAEKI 207
G D A +I
Sbjct: 407 HSTSGNIDRAFEI 419
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + L+ G G ++ A ++ N+M+ +G +P L T+N+LI+ +CK+G+
Sbjct: 458 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 517
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ M + + G D STY LI ++
Sbjct: 518 GDDAENMVKEMVENGITPDDSTYISLIEGLT 548
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGFNP + + L+QGL G + A+ MV +M++ G PD T+ SLIE + E
Sbjct: 493 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 6/151 (3%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TFN ++ +C +G+ +E+ + + + TY +I G + A ++ +
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 107 VEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGG 164
E G P Y +I G + G+ D+A F E+ KG P +Y LI G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ A Y M E G+ ++L+ L
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHAL 302
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 6/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +L+ L G + A +++ MI++G P+ T+ +L++ +C +
Sbjct: 544 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 603
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED----GHNPFPS 116
+ +++ + KLG DV TY L+ + + G I A L ++ D G N P
Sbjct: 604 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 663
Query: 117 L--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+ Y+ II G + G+ D+A F E+K G PN YT+LI R G+ +A +
Sbjct: 664 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 723
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EM + G+ + + ++ G G+ D A
Sbjct: 724 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 43/256 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M +G P V L+ G +G E AK + N+M+ G PD+ T + LI+ +CK G
Sbjct: 328 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 387
Query: 60 ------------------EVEFCVEMYYSVC----------------KLGSCADVSTYKI 85
+V C + +C KLG +V T
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 447
Query: 86 LIPAVSKAGMIDEAFRLLHNLVED----GHNPFPSL--YAPIIKGAFRRGQFDDAFCFFS 139
L+ + ++G I A L N++ D G N P+ Y+ II G + G+ D+A F
Sbjct: 448 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 507
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
E+K G P+ YT+LI R G++ +A EM ++G+ P F ++ D L C
Sbjct: 508 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML--CK 565
Query: 200 KHDLAEKIEQLEVSLR 215
+ + E E LEV ++
Sbjct: 566 EGKVIEANELLEVMIQ 581
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 8/221 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G V +L+ L G + A +++ MI++G D+ T+++LI+ +C
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED----GHNPFPS 116
+ ++ S+ KLG D Y L+ + + G I+ A +L ++ D G P+
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301
Query: 117 L--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
L Y+ II G + + D+A F E+K +G P+ YTTLI G++ +A
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
EM ++G+ P ++ D L C K + E + LEV ++
Sbjct: 362 EMLDVGIQPDVTTSSVLIDML--CKKGKVIEANKLLEVVIQ 400
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P +++ GL G + A+++ +M G PD+ ++ SLI C+SG+ +
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + +G DV+T+ +LI + K G + EA LL +++ G P Y ++KG
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE------MG 180
+ +A F +++ G P+ Y TL+ + G A +M
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ DGL G+ D A ++
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEAREL 686
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P + +++ GL + A+++ +M QG PD+ ++ +LI C SG+ E
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + +G DV+T +LI + K G + EA +LL +++ G P ++KG
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA----ANYLMEMTEMGLT 182
+ + A F +++ G PN TL+ + G A N L + + G+
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478
Query: 183 --PISRCFDLVTDGLKNCGKHDLAEKI 207
P + + ++ DGL CG+ D A ++
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEAREL 505
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P LV+GL + A Q+ KM K G PD+ T+ +L++ +C++G
Sbjct: 579 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGN 638
Query: 61 VEFCVEMYYSVC----KLGSC--ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
++ +E++ + + G+ DV +Y I+I + K G DEA L + G P
Sbjct: 639 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 698
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y +I G R G+ +DA F+E+ +G N Y+ +I + G+ +A M
Sbjct: 699 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALFQKM 758
Query: 175 E 175
E
Sbjct: 759 E 759
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS------DPDLETFNSLIET 54
M G P V L++GL +G ++ A ++ M+ S P+ +++ +I+
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+CK G + E++ + LG DV +Y LI ++G +A L + +V+ G P
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+ ++ +I + G+ +A + +G PN YTTL+ R EA M
Sbjct: 553 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 612
Query: 175 EMTEMGLTPISRCFDLVTDG 194
+M ++G P D+VT G
Sbjct: 613 KMQKLGCLP-----DVVTYG 627
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P + +++ GL + A+++ +M QG PD+ ++ SLI C+SG+ E
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + +G +DV+T +LI + K G + EA LL +++ G Y+ +IKG
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE------MG 180
+ + +A F ++ G P+ Y TL+ + G A EM +
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ DGL + D A ++
Sbjct: 298 CKPTLISYSIIIDGLCKDRREDEAREL 324
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV----EMYYSV 71
L++GL + A Q+ M K G PD + +L++ +C++G++ + EM
Sbjct: 51 LIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 110
Query: 72 CKLG-SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ G C + +Y I+I + K DEA L + G P Y +I G R G
Sbjct: 111 SQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSG 170
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+++ A C F+E+ G + + LI + + G+ +EA L M + G +
Sbjct: 171 KWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYS 230
Query: 190 LVTDGLKNCGKHDLAE 205
+ GL C KH ++E
Sbjct: 231 TLIKGL--CMKHRISE 244
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 14/192 (7%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M+ G PD+ T LI+ CK G+V E+ + + G D+ TY LI +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE---------IKIKGH 146
I EA +L ++ + G P Y ++KG + G+ + A E IK K
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK-- 118
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P Y+ +I + R EA EM G+ P + + G GK + A+
Sbjct: 119 -PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177
Query: 207 I--EQLEVSLRS 216
+ E L+V +RS
Sbjct: 178 LFNEMLDVGIRS 189
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 6/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V +L+ L G + A +++ MI++G P+ T+ +L++ +C +
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 759
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED----GHNPFPS 116
+ +++ + KLG DV TY L+ + + G I A L ++ D G N P
Sbjct: 760 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 819
Query: 117 L--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+ Y+ II G + G+ D+A F E+K G PN YT+LI R G+ +A +
Sbjct: 820 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 879
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EM + G+ + + ++ G G+ D A
Sbjct: 880 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 43/256 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M +G P V L+ G +G E AK + N+M+ G PD+ T + LI+ +CK G
Sbjct: 484 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543
Query: 60 ------------------EVEFCVEMYYSVC----------------KLGSCADVSTYKI 85
+V C + +C KLG +V T
Sbjct: 544 VIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 603
Query: 86 LIPAVSKAGMIDEAFRLLHNLVED----GHNPFPSL--YAPIIKGAFRRGQFDDAFCFFS 139
L+ + ++G I A L N++ D G N P+ Y+ II G + G+ D+A F
Sbjct: 604 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 663
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
E+K G P+ YT+LI R G++ +A EM ++G+ P F ++ D L C
Sbjct: 664 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML--CK 721
Query: 200 KHDLAEKIEQLEVSLR 215
+ + E E LEV ++
Sbjct: 722 EGKVIEANELLEVMIQ 737
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 8/218 (3%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P V +L+ L G + A +++ MI++G D+ T+++LI+ +C +
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 400
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED----GHNPFPSL-- 117
++ S+ KLG D TY L+ + + G I+ A +L ++ D G P+L
Sbjct: 401 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 460
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y+ II G + + D+A F E+K +G P+ YTTLI G++ +A EM
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
++G+ P ++ D L C K + E + LEV ++
Sbjct: 521 DVGIQPDVTTSSVLIDML--CKKGKVIEANKLLEVVIQ 556
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 9/212 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G ++G E AK + N+M+ G PD+ T LI+ CK G+
Sbjct: 191 MKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK 250
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+ + G D+ TY LI + I EA +L ++ + G P Y
Sbjct: 251 VIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGT 310
Query: 121 IIKGAFRRGQFDDAFCFFSEI-------KIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
++KG + G+ + A E+ IK P+ + LI + + G+ +EA L
Sbjct: 311 LMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELL 370
Query: 174 MEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
M + G + + GL C +H ++E
Sbjct: 371 EVMIQRGCILDIVTYSTLIKGL--CMEHRISE 400
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +++ GL G + A+++ +M G PD+ ++ SLI C+SG+ + +
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + +G DV+T+ +LI + K G + EA LL +++ G P Y ++KG
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE------MGL 181
+ +A F +++ G P+ Y TL+ + G A +M
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 816
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ DGL G+ D A ++
Sbjct: 817 KPDVISYSIIIDGLCKHGREDEAREL 842
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV---- 71
L++GL + A + M K G PD T+ +L++ +C++G + ++++ +
Sbjct: 95 LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154
Query: 72 ------CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
CK + +Y I+I + K DEA L + G P Y +I G
Sbjct: 155 GRYGIKCK----PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGF 210
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G+++ A C F+E+ G P+ LI M + G+ +EA L M G
Sbjct: 211 CHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDI 270
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+ + GL C KH ++E QL +S++ +
Sbjct: 271 VTYSTLIKGL--CMKHRISEA-TQLFMSMKKL 299
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS------DPDLETFNSLIET 54
M G P V L++GL +G ++ A ++ M+ S P+ +++ +I+
Sbjct: 589 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 648
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+CK G + E++ + LG DV +Y LI ++G +A L + +V+ G P
Sbjct: 649 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 708
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+ ++ +I + G+ +A + +G PN YTTL+ R EA M
Sbjct: 709 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 768
Query: 175 EMTEMGLTPISRCFDLVTDG 194
+M ++G P D+VT G
Sbjct: 769 KMQKLGCLP-----DVVTYG 783
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 6/206 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +++ GL + A+++ +M QG PD+ ++ +LI C SG+ E +
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + +G DV+T +LI + K G + EA +LL +++ G ++KG
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA----ANYLMEMTEMGLT- 182
+ + A F +++ G PN TL+ + G A N L + + G+
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635
Query: 183 -PISRCFDLVTDGLKNCGKHDLAEKI 207
P + + ++ DGL CG+ D A ++
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEAREL 661
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +++ GL + A+++ +M QG PD+ ++ SLI C SG+ E +
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + +G DV+T +LI K G + EA LL +V G Y+ +IKG
Sbjct: 223 FNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCM 282
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ + +A F +K G P+ Y TL+ + G+ A + EM
Sbjct: 283 KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 49/214 (22%)
Query: 43 PDLETFNSLIETICKSGEV---------------------------EFCVE--------M 67
PD+ T + LI+ +CK G+V C+E +
Sbjct: 52 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED----GHNPFPSL--YAPI 121
+ S+ KLG D TY L+ + + G I+ A +L ++ D G P+L Y+ I
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G + + D+A F E+K +G P+ YT+LI G++ +A EM ++G+
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGI 231
Query: 182 TPISRCFDLVTDGL---KNCGKHDLAEKIEQLEV 212
P D+ T G+ C + + E E LEV
Sbjct: 232 QP-----DVTTSGVLIDMFCKEGKVIEANELLEV 260
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI---------LIPAVSKA 93
PD TFN LI +C V + + + G D+ TY I LI + K
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G + EA LL +++ G Y+ +IKG + +A F ++ G P+ Y
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 154 TTLITMCGRGGRFVEAANYLMEMTE------MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
TL+ + G A EM + P + ++ DGL + D A ++
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V L+ G AG L A ++N+MI + +P++ T+N LI+ +CK G+
Sbjct: 231 MNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGK 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + G ADV TY ++ + K+ +D+A L + + G P Y
Sbjct: 291 VKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTA 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F + +KG + Y +I+ + G F +A +M + G
Sbjct: 351 LIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNG 410
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + FD++ L ++D AEK+
Sbjct: 411 CIPNAVTFDIIIRSLFEKDENDKAEKL 437
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ + G + + ++ K++K G PD T N+L++ +C GE
Sbjct: 91 MEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 150
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + V G + +Y L+ + K G A +LL + + P +Y+
Sbjct: 151 VKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYST 210
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + + A+ FFSE+ +G PN Y+TLI G+ + A + L EM
Sbjct: 211 IIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKN 270
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++++ D L GK A+K+
Sbjct: 271 INPNVYTYNILIDALCKEGKVKEAKKL 297
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G ++ + +K++ QG + ++ +L+ +CK GE
Sbjct: 130 GYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 189
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V++ + + DV Y +I + K ++++A+ + G P Y+ +I G
Sbjct: 190 VKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWG 249
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
GQ AF +E+ +K PN Y LI + G+ EA L EM G
Sbjct: 250 FCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPAD 309
Query: 185 SRCFDLVTDGL 195
++ V DGL
Sbjct: 310 VVTYNSVLDGL 320
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF L+ GL G A +++ + + + PD+ ++++I+ +CK V
Sbjct: 164 QGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQ 223
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G +V TY LI AG + AF LL+ ++ NP Y +I
Sbjct: 224 AYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILID 283
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ +A +E+ KG P + Y +++ + +A M+M + G+ P
Sbjct: 284 ALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQP 343
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DGL G+ A+K+ Q
Sbjct: 344 NKYTYTALIDGLCKGGRLKNAQKLFQ 369
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ GL G L++A+++ ++ +G D+ T+N +I +CK G
Sbjct: 336 MKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGM 395
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
+ + M + G + T+ I+I ++ + D+A +LLH ++ G
Sbjct: 396 FDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKG 445
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 95/207 (45%), Gaps = 8/207 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V +LLV L G A ++ +M + G PD+ T+N LI CK G
Sbjct: 245 MVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGN 304
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + + G A TY LI A S+ G + E RL V+ G P +Y
Sbjct: 305 EKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + AF +E++ K PP+ Y TLI GR EA + EMT+ G
Sbjct: 365 LINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG 424
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P DL GL G+ D AE +
Sbjct: 425 IQP-----DL---GLCKNGQGDDAENL 443
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+ G G +E A ++ ++M+ QG P +N+LI C G+++ ++ + +
Sbjct: 189 LISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQR 248
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V+TY +L+ A+ G +A+ +L + +G +P Y +I G + G A
Sbjct: 249 GVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKA 308
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ KG YT+LI R G+ E + G+ P ++ + +
Sbjct: 309 LEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALIN- 367
Query: 195 LKNCGKHDLAEKIE 208
+C D+ E
Sbjct: 368 -SHCAGGDMERAFE 380
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG L+ G ++ ++ +K+G PD+ +N+LI + C G+
Sbjct: 315 MSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGD 374
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + K D TY LI G +DEA L+ + + G P
Sbjct: 375 MERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQP------- 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
G + GQ DDA E+ KG P+ Y +LI
Sbjct: 428 -DLGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLI 463
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 16/189 (8%)
Query: 9 PVRGRDLLVQ--------------GLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIE 53
PVR +LL Q G G +++A +++ +M ++G PD T+ +LI
Sbjct: 132 PVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLIS 191
Query: 54 TICKSGEVEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
CK G +E +++ + G A + Y LI G +D A + ++V+ G
Sbjct: 192 GWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVA 251
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
+ Y ++ F G+ DA+ E++ G P+ Y LI + G +A
Sbjct: 252 MTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEV 311
Query: 173 LMEMTEMGL 181
EM+ G+
Sbjct: 312 FEEMSRKGV 320
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + L+ G +E A +++ +M K+ PD T+N+LI C G ++
Sbjct: 353 KGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDE 412
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + K G D+ + K G D+A L+ +V G P S Y +I+
Sbjct: 413 ARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIE 464
Query: 124 G 124
G
Sbjct: 465 G 465
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF P +++GL A E +++ +M+++ P+ TF+ L+ C+ G
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ + G A+ + I+I + K G +D+AF+ L+N+ G +P Y
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG R +++DA E+ K PPN + T I + + G +A + +M+E G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++ + +G G+ D A
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSA 444
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++LV G ++ A ++V +M++ G P+L T+N+L++ I K
Sbjct: 483 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCN 542
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + + G D+ TY +I +S+ ++EA ++ H + + G P +Y
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ +R D A FF+ + G PN Y TLI E + L E+ G
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Query: 181 L 181
+
Sbjct: 663 V 663
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL NA L++A +++ +M+++ P++ TFN L+ C+ G ++ +E+ + + G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY L+ ++K +EA LLH LV +G +P Y+ II R + ++A
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582
Query: 136 CFFSEIKIKGHPPNRPVYT-TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F ++ G P +Y L+ +C R A ++ M G P + + +G
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTD-GAIDFFAYMVSNGCMPNELTYITLIEG 641
Query: 195 LKN 197
L N
Sbjct: 642 LAN 644
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 90/189 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++++ G+ G ++ A++ +N++ G PD ++ ++++ +C +
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E++ + + + T+ +L+ + GM++ A ++L + G +L
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ DDAF F + + G P+ YTT++ R R+ +A L EM
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385
Query: 181 LTPISRCFD 189
P F+
Sbjct: 386 CPPNEVTFN 394
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL + G + A +++ M+ +G P + T+ L+E +CKS +E+ + G
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 210
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY ++I + + G +D+A L+ L G P Y ++KG +++D
Sbjct: 211 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ K PN + L+ RGG A L +M+ G + ++V + +
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 331 CKQGRVDDA 339
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A ++V++ +G PD+ LI +C+ G + + + G+ DV Y
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G +D A RL+ ++ P Y PII+G RG+ +A ++ +G
Sbjct: 119 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ YT L+ + F +A L EM G TP ++++ +G+ G+ D A
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 206 K 206
+
Sbjct: 236 E 236
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +++GL A E AK+++ +M+++ P+ TFN+ I +C+ G
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G ++ TY L+ G +D A L +++ P Y
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTT 462
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + D A +E+ K PN + L++ + G EA + +M E G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
TP ++ + DG+ K+C + E + L
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGL 553
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 3/178 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV G G L++A++++ M PD T+ +I +C G V + + +
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY +L+ AV K+ +A +L + G P Y II G R G+ DD
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A F + + G P+ YTT++ R+ + EM E P FD++
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ + G ++ A Q +N M G PD ++ ++++ +C++ E E+ + +
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ T+ I + + G+I++A L+ + E G Y ++ G +G+ D
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F + K PN YTTL+T R AA L EM + P F+++
Sbjct: 444 ALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 500
Query: 194 GLKNCGKHDLAEKIEQLE 211
C K + E IE +E
Sbjct: 501 FF--CQKGLMDEAIELVE 516
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV-CKLGSCA 78
L G +E A ++ +M + G + ++ T+N+L+ C G V+ +E++YS+ CK
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK----P 455
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
+ TY L+ + A +D A LL +++ P + ++ ++G D+A
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
++ G PN Y TL+ + EA L + G++P D+VT
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP-----DIVT 564
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ G + A ++ ++M+ +G P+ F +LI+ CK+G
Sbjct: 186 MLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTT 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ GR V+A L EM +G
Sbjct: 306 LIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVG 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 366 LKPDARTYTMIINEF--CKKGDVWK 388
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 155
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDAN 215
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 216 ELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 276 --CKKGDLKQ 283
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI CK +
Sbjct: 151 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESK 210
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G + + LI K G +D A + ++ +P Y
Sbjct: 211 XDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 270
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ KG P++ YTTLI C + G A + M +
Sbjct: 271 LIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQEN 330
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + GL G+ AEK+ E L V L+
Sbjct: 331 XRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLK 367
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 224 KGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 283
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 284 AHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALIS 343
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 344 GLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 403
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 404 SVVTYNVLMNG 414
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI K D+A L ++ G P + +I G
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDG 239
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPD 299
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 300 KITYTTLIDGC--CKEGDLDSAFEH 322
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 256 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGD 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + G +A ++L ++ G P Y
Sbjct: 316 LDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTM 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 376 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L+SA + +MI++ D + +LI +C G
Sbjct: 291 MSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGR 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 351 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 410
Query: 121 IIKG 124
++ G
Sbjct: 411 LMNG 414
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 61 LITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 181 RLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGH 240
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 241 CKNGRVDLAMEI 252
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG +P D ++ G L +G E +++ N+ +G T N +I +C G+
Sbjct: 499 MSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGK 558
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ EM+ + + G AD TY LI K G + ++ LL+ LV G P S YA
Sbjct: 559 SDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYAS 618
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G + A + ++ KG P+ + LI+ + GR E + LM M E
Sbjct: 619 LIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENK 678
Query: 181 LTPISRCFDLVTDGL 195
+ P F+ + + L
Sbjct: 679 IKPKKAAFEDLAECL 693
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D+G+ P ++ GL G A+++ +M+ +G P+ T+N+++ KSG+
Sbjct: 324 LKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGD 383
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+Y +C G T +I + G DEAF + + E G Y
Sbjct: 384 FERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNS 443
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ D+ +E+ + P+ +Y LI + G F A L +M+ G
Sbjct: 444 LIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKG 503
Query: 181 LTPISRCFDLVTDG 194
L P + +D + G
Sbjct: 504 LHPNAYTYDTMLHG 517
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++ G L +G E A ++ N+M +G T N +I +C G+
Sbjct: 359 MMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGK 418
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + G AD TY LI K G +DE LL+ LV P SLY
Sbjct: 419 SDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYEL 478
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + G F+ A ++ KG PN Y T++ + G F E G
Sbjct: 479 LIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKG 538
Query: 181 L-TPISRCFDLVTDGLKNCGKHDLAEKI 207
T + C ++++ L + GK D A ++
Sbjct: 539 YGTTTATCNKIISE-LCSRGKSDEASEM 565
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG--SDPDLETFNSLIETICKS 58
+ + G + + ++ G L AG E + +MIK G SD + ET LI+ C S
Sbjct: 182 LKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDS 241
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+V E+ K G TY LI +A +LH ++ H P Y
Sbjct: 242 GQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTY 301
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
II G + + +A+ F+++K +G+ P+R +YTT+I G F EA EM +
Sbjct: 302 QEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMD 361
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLA 204
G+ P + ++ + G G + A
Sbjct: 362 KGMQPNAYTYNTMLHGSLKSGDFERA 387
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+Q ++G + +++N+ +K G DP T+N LI C++ E+ +++
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY+ +I + K EA+R+ ++L + G+ P +Y +I G G F +A
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E+ KG PN Y T++ + G F A EM G + + + L
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413
Query: 196 KNCGKHDLA 204
+ GK D A
Sbjct: 414 CSRGKSDEA 422
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 2/203 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +LL+ G E+AK+++ M +G P+ T+++++ KSG+ E E+
Sbjct: 471 PSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVREL 530
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
Y C G +T +I + G DEA + + E G Y +I+G +
Sbjct: 531 YNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCK 590
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ + +E+ +G P+ Y +LI + G A +M G+ P +
Sbjct: 591 EGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANL 650
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
+ + GL C + E +++L
Sbjct: 651 REHLISGL--CKQGRATEGMDRL 671
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+ + ++ L + G + A ++ KM + G D T+NSLI CK G+
Sbjct: 394 MCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGK 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + VS Y++LI K G + A RLL ++ G +P Y
Sbjct: 454 VDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDT 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
++ G+ + G F+ ++E KG+ +I+ +C R G+ EA+ +M+E
Sbjct: 514 MLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSR-GKSDEASEMFKKMSET 572
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G+ + ++ + G GK
Sbjct: 573 GIKADAITYNSLIRGFCKEGK 593
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 8/202 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + L+ G A S ++++ MI + P + T+ +I +CK+ E C
Sbjct: 258 GLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEE---C 314
Query: 65 VEMYYSVCKL---GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+E Y L G D Y +I + + G EA +L +++ G P Y +
Sbjct: 315 LEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTM 374
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMG 180
+ G+ + G F+ A ++E+ KG+ +I+ +C R G+ EA +M+E G
Sbjct: 375 LHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSR-GKSDEAFEVFKKMSETG 433
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+ + ++ + G GK D
Sbjct: 434 IQADAITYNSLIRGFCKEGKVD 455
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 85/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G + L++G G ++ ++N+++ Q P + + LI CK G+
Sbjct: 429 MSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGD 488
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + G + TY ++ K+G + L + G+ +
Sbjct: 489 FEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNK 548
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II RG+ D+A F ++ G + Y +LI + G+ ++ N L E+ G
Sbjct: 549 IISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQG 608
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + + L G + A+++
Sbjct: 609 LQPSASSYASLIIQLCQNGDAESAKRL 635
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 2/196 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ GL A ++ N + +G PD + ++I +C+ G ++
Sbjct: 296 PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKL 355
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ + G + TY ++ K+G + A L + + G+ II
Sbjct: 356 WFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCS 415
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
RG+ D+AF F ++ G + Y +LI + G+ E N L E+ P
Sbjct: 416 RGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSL 475
Query: 188 FDLVTDGLKNCGKHDL 203
++L+ +K+C D
Sbjct: 476 YELLI--IKSCKDGDF 489
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++G AG +E + ++ ++ + G P++ + +LI+ CK GE+E ++++ + KL
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP--IIKGAFRRGQFD 132
G A+ TY +LI + K G+ + F + + EDG FP+LY ++ + G+
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG--VFPNLYTYNCVMNQLCKDGRTK 285
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DAF F E++ +G N Y TLI R + EA + +M G+ P ++ +
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 193 DGLKNCGK 200
DG GK
Sbjct: 346 DGFCGVGK 353
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +G +P + ++LV G G A +MV +M ++G P T+ LI+T +S
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ S+ +LG DV TY +LI G ++EA RL ++VE P +Y
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A E++ K PN Y +I + + + EA + +M + G
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 181 LTPISRCFDLVT 192
+ P + L++
Sbjct: 544 IDPSTSILSLIS 555
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G R +L+ GL G + +M KM + G P+L T+N ++ +CK G
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G ++ TY LI + + ++EA +++ + DG NP Y
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ A ++K +G P+ Y L++ R G AA + EM E G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+ P + ++ D + D EK QL +S+ +
Sbjct: 404 IKPSKVTYTILIDTF---ARSDNMEKAIQLRLSMEEL 437
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + + L+ G G L A + + +G P L T+N L+ C+ G+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + + G TY ILI +++ +++A +L ++ E G P Y+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +GQ ++A F + K PN +Y T+I + G A L EM E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 181 LTP 183
L P
Sbjct: 509 LAP 511
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + ++ L G + A Q+ ++M ++G ++ T+N+LI +C+ +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G ++ TY LI G + +A L +L G +P Y
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R+G A E++ +G P++ YT LI R +A + M E+G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + ++ G G+ + A ++
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRL 465
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 15 LLVQGLLNA----GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
+LV LLNA G +E A +++ G D+ +N++I+ ++G ++ ++ Y S
Sbjct: 828 VLVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSS 887
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ LG + TY +I +K+G +A ++ +L G P +Y+ ++ + G
Sbjct: 888 LTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGM 947
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
++ A F +K++G P+ Y LI R G+F +A L+EM + G P S F L
Sbjct: 948 YEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLL 1007
Query: 191 VTDGLKNCGKHDLAEK-IEQLEVS 213
+ + GK + AE +E+++ +
Sbjct: 1008 LISAYAHRGKCNEAENALERMQTA 1031
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +++ L AG L+ A + + G P L+T++++I KSG +M+ +
Sbjct: 866 NTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKS 925
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D Y ++ +K+GM + A L + G P Y +I R GQF
Sbjct: 926 AGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAK 985
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A E+ G PP+ + LI+ G+ EA N L M + P R ++ V
Sbjct: 986 AEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEV 1043
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V GRD + GL A + E M+ Q DPD F+++I + + + MY
Sbjct: 285 VYGRDKQI-GLAEAAFQE--------MLDQKLDPDEVAFSTMILNYANAEMFDEMLTMYE 335
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
++ G TY ++ ++KA + +A L +LVE+ P YA +I + G
Sbjct: 336 AMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKLG 395
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+F++A F + G+ P+ +Y ++ M G+ GR+ EA + M L +
Sbjct: 396 RFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYA 455
Query: 190 LVTDGLKNCGKHDLAEKI 207
+ + K +LA I
Sbjct: 456 TMLHICEKADKFELAASI 473
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L A L A + ++++ + + +I K G
Sbjct: 337 MMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKLGR 396
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E++ ++ G D Y +++ + K G DEA + + YA
Sbjct: 397 FEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYAT 456
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + +F+ A FS++++K P + VYT++I++ G+ G + EA EM E+
Sbjct: 457 MLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELR 516
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + F ++ + GK++ A ++
Sbjct: 517 LLVDVKTFSVMANVRLKAGKYNEAVQV 543
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
AG + A+++ +M + D++TF+ + K+G+ V++ + G D +
Sbjct: 498 KAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDT 557
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDG------HNPFPSLYAPIIKGAFRRGQFDDAF 135
+K L+ KAG ++ A + LVE G +N SLYA +DA
Sbjct: 558 AWKTLLHCYVKAGNVERATKTFKTLVESGIADLMAYNDMLSLYAEF-------DMLEDAK 610
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P++ + T++ + A L +M E G TP D +T G+
Sbjct: 611 LLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTP-----DHITQGI 665
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++ G P ++ D ++ +G A++M + G PD + ++ ++ KSG
Sbjct: 888 LTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGM 947
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ ++ G +Y LI A ++AG +A +LL + + G P +
Sbjct: 948 YEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLL 1007
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RG+ ++A ++ P Y ++ R +A ++M G
Sbjct: 1008 LISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSG 1067
Query: 181 LTP 183
+ P
Sbjct: 1068 IQP 1070
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L L AG + A+ + ++M +G D + T LI K+G E ++ + +
Sbjct: 733 LTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKLKPELPR-- 790
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y ++ A+ +++A L+ + + G L + ++ + G +DA
Sbjct: 791 ---NNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDAD 847
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ G P + Y T+I R GR +A + +T +GL P + +D +
Sbjct: 848 ALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVF 907
Query: 196 KNCGKHDLAEKI 207
G+ AEK+
Sbjct: 908 AKSGRTRDAEKM 919
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V L+ G N G A ++ N+M +G P+ TF ++I +C++
Sbjct: 288 MIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANM 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + TY ++I ++G I EAF LL +V G P Y P
Sbjct: 348 MAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRP 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +A F ++ H N Y+ L+ + GRF +A + M E G
Sbjct: 408 LISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERG 467
Query: 181 LTPISRCFDLVTDG 194
+ C+ ++ DG
Sbjct: 468 VAMDLVCYAILIDG 481
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G +AK ++MI +G P + T+ SLI C GE ++Y + G
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ T+ +I + +A M+ EA RL + E P Y +I+G R G +AF
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ KG P+ Y LI+ GR EA ++ ++ + + C+ + G
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V L+ GL AG ++ A+ + + + P+ T+ ++ + + G
Sbjct: 533 MVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGN 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V++++++ K G A +Y ILI + G I+EA +LLH + ++ P Y+
Sbjct: 593 MEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYST 651
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II +R +A + + KG P+ Y+ L+ C G +A EM G
Sbjct: 652 IIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRG 711
Query: 181 L 181
+
Sbjct: 712 M 712
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +L+ G +++A ++KM K + + +NSLI CK G
Sbjct: 218 MGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGN 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + G V TY LI G +AF++ + + G +P +
Sbjct: 278 ASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTA 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G R +A F E+K + P+ Y +I R G EA + L EM G
Sbjct: 338 IISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKG 397
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + GL + G+
Sbjct: 398 FVPDTYTYRPLISGLCSVGR 417
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 92/244 (37%), Gaps = 35/244 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG +P ++ GL A + A ++ +M ++ P T+N +IE C+SG
Sbjct: 323 MTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGN 382
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D TY+ LI + G + EA + +L +D H Y+
Sbjct: 383 ISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSA 442
Query: 121 IIKGAFRRGQFDDA-----------------------------------FCFFSEIKIKG 145
++ G + G+F DA F E+ G
Sbjct: 443 LVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ +YT +I + G EA M + G P + + +GL G D AE
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562
Query: 206 KIEQ 209
+ +
Sbjct: 563 LLSK 566
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G A+ + +M ++G + T++ LI++ C+ GE++ + + K V Y
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI K G A +++ G P Y +I G G++ AF ++E+
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTA 325
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
KG PN +T +I+ R EA EM E + P ++++ +G +C ++
Sbjct: 326 KGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG--HCRSGNI 383
Query: 204 AEKIEQLE 211
+E L+
Sbjct: 384 SEAFHLLD 391
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P L+ GL + G + AK+ V+ + K + +++L+ CK G
Sbjct: 393 MVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGR 452
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + G D+ Y ILI ++ F LL + G P +Y
Sbjct: 453 FKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTN 512
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +AF + + +G PN YT LI + G +A E
Sbjct: 513 MIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSD 572
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+TP + D L G + A ++
Sbjct: 573 VTPNHITYGCFLDHLTRGGNMEKAVQLHH 601
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P VR L+ GLL + + ++ PD+ +++++ ++C+ +
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 61 VEFCVEMYYSV----CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
EM + + CKL + Y +LI + K+ I EA + + L++ G
Sbjct: 147 FNKAKEMIHWMEFNQCKLS----IVVYNVLIHGLCKSRRIWEALEIKNCLMQKG------ 196
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
L A ++ G+F++A F E+ KG N Y+ LI R G A +L +M
Sbjct: 197 LEANVVT---YYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKM 253
Query: 177 TEMGL 181
T+ +
Sbjct: 254 TKASI 258
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G +E A Q+ + M+K G ++N LI C+ G++E ++ + + D
Sbjct: 587 LTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPD 645
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
TY +I K + EA +L H +++ G P Y+ ++ G G+ + AF
Sbjct: 646 YITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRD 705
Query: 140 EIKIKGHPPNR 150
E+ +G N
Sbjct: 706 EMIRRGMRSNH 716
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 7/202 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ L G+L+ ++++NK++K G P+L TFN I+ +C+ G +E
Sbjct: 211 GIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGA 270
Query: 65 ------VEMY-YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
E Y + + G D TY +I SK G I +A R+L + G P
Sbjct: 271 NSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFT 330
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G + G D A F E KG P+ +Y TLI + G ++A + +M+
Sbjct: 331 YCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMS 390
Query: 178 EMGLTPISRCFDLVTDGLKNCG 199
+ G++P ++LV +GL G
Sbjct: 391 KEGMSPDIWTYNLVINGLCKMG 412
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 90/204 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + L++GL G + A Q++N M K+G PD+ T+N +I +CK G V
Sbjct: 357 KGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSD 416
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D+ T+ LI K +D A +L ++ G P Y I+
Sbjct: 417 ANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILN 476
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + +D F I KG PN Y LI + + EA + L E+ GL P
Sbjct: 477 GLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIP 536
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
F V G N G D A ++
Sbjct: 537 DPVSFGTVISGFCNNGDLDEAYQL 560
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
Query: 7 NPPVRGRDL-------LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
N P +G +L ++ G Y A ++ NKM++ G P + TFN L+ +CK G
Sbjct: 171 NMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKG 230
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID-------EAFRLLHNLVEDGHN 112
++ ++ V K G C ++ T+ I I + + G+++ EA LH +V G
Sbjct: 231 HLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLE 290
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
P Y II G + G+ DA + K KG P+ Y +LI + G A
Sbjct: 291 PDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALAL 350
Query: 173 LMEMTEMGLTPISRCFDLVTDGLKNCG 199
E GL P ++ + GL G
Sbjct: 351 FEEALGKGLKPSIVLYNTLIKGLSQQG 377
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG+ P + + L+ G +++A +++ M G PD+ T+NS++ +CK+ + E
Sbjct: 427 KGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPED 486
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E + + + G ++ TY ILI ++ KA + EA LL + G P P + +I
Sbjct: 487 VMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVIS 546
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNR-PVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G G D+A+ F ++ + + Y +I A EM + G
Sbjct: 547 GFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCD 606
Query: 183 PISRCFDLVTDGLKNCG 199
P S + ++ DG G
Sbjct: 607 PDSYTYRVMIDGFCKVG 623
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + ++ G G ++ A +++ +G PD T+ SLI +C+ G+
Sbjct: 284 MVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGD 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ G + Y LI +S+ G++ +A +L++++ ++G +P Y
Sbjct: 344 IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNL 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DA + KG+ P+ + TLI + + A L M G
Sbjct: 404 VINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG 463
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+TP ++ + +GL K
Sbjct: 464 VTPDVITYNSILNGLCKAAK 483
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 7/197 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMV-------NKMIKQGSDPDLETFNSLIETICK 57
G P + ++ +QGL G LE A V +KM+ +G +PD T+N++I K
Sbjct: 246 GVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSK 305
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+++ + G D TY LI V + G ID A L + G P L
Sbjct: 306 VGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVL 365
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +IKG ++G A +++ +G P+ Y +I + G +A N L
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI 425
Query: 178 EMGLTPISRCFDLVTDG 194
G P F+ + DG
Sbjct: 426 AKGYLPDIFTFNTLIDG 442
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P L+ G+ G ++ A + + + +G P + +N+LI+ + + G V
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLK 381
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + K G D+ TY ++I + K G + +A LL+ + G+ P + +I
Sbjct: 382 ALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLID 441
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G +R + D+A + G P+ Y +++ + + + + E G P
Sbjct: 442 GYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLP 501
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++++ + L C + E ++ LE
Sbjct: 502 NIITYNILIESL--CKARKVTEALDLLE 527
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KG P + ++L++ L A + A ++ ++ +G PD +F ++I C +G+++
Sbjct: 496 EKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLD 555
Query: 63 FCVEMYYSV-CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+++ + + C V+TY I+I A S+ +D A +L H + + G +P Y +
Sbjct: 556 EAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVM 615
Query: 122 IKGAFRRGQFDDAFCF-FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G + + F EI+I G P+ + +I R EA + M G
Sbjct: 616 IDGFCKVGNVNSGYDFLLKEIEI-GFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTG 674
Query: 181 LTP 183
+ P
Sbjct: 675 VVP 677
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 7/207 (3%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + ++ L+ GY A ++ +M +G PD+ TF I++ C++ + +
Sbjct: 109 PSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRL 168
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ G + Y +I + EA+ L + ++ G P + + ++ +
Sbjct: 169 LNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCK 228
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG------GRFVEAANYLMEMTEMG 180
+G + +++ G PN + I +C +G + VEA NYL +M G
Sbjct: 229 KGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKG 288
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + G GK A +I
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRI 315
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V G G ++ A+++ N+M+ +G P T+N++I+ +CK VE V M+ + K G
Sbjct: 293 MVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKG 352
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+++TY ++I + AG +D+A + + DG P Y I+ G +
Sbjct: 353 YVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGL 412
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT---MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
F ++ +G PN Y LI+ + + V A L+EM + G P F+ V
Sbjct: 413 SMFEKMG-QGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVL 471
Query: 193 DGLKNCGKHDLAEKIEQLE 211
+GL G A++I +L+
Sbjct: 472 NGLLLTGNQAFAKEILRLQ 490
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + ++ + + AG + A ++ M + G DL +FN++++ +CKS
Sbjct: 138 MRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKR 197
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + V + ADV +Y I+ +A +L +VE G P + Y
Sbjct: 198 VEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNI 257
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG FR GQ +A+ FF ++K + + YTT++ G G A EM G
Sbjct: 258 LLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEG 317
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + ++ + L C K + + E
Sbjct: 318 ILPSTATYNAMIQVL--CKKDSVENAVLMFE 346
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 84/185 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F V +++ G A +++ +M+++G P + T+N L++ ++G+++
Sbjct: 213 FKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAW 272
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E + + + DV TY ++ G I A ++ + +V +G P + Y +I+
Sbjct: 273 EFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVL 332
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
++ ++A F E+ KG+ PN Y +I G +A ++ M G P
Sbjct: 333 CKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNV 392
Query: 186 RCFDL 190
+ +++
Sbjct: 393 QTYNV 397
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P + ++++ GL G ++ ++ +M K+G D T+N+LI+ CK G
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGN 325
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M+ + + G V TY LI ++ KAG ++ A L + G P Y
Sbjct: 326 FHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G ++A+ E+ G P+ Y LI G+ V+A L +M E G
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + V G C +D+ E +
Sbjct: 446 LTPDVVSYSTVLSGF--CRSYDVDEAL 470
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G++ + L++G G A M +M++ G P + T+ SLI ++CK+G
Sbjct: 301 MNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGN 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + G C + TY L+ S+ G ++EA+R+L ++++G +P Y
Sbjct: 361 MNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNA 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ DA ++K KG P+ Y+T+++ R EA +M G
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P + + + G C + E + + LR
Sbjct: 481 IKPDTITYSSLIQGF--CEQRRTKEACDLFDEMLR 513
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +P V ++L++G AG L+ A + ++M K+G P++ T+N+LI+ CK +
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ S+ G ++ +Y ++I + + G + E +L + + G++ Y
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNT 315
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G F A +E+ G P+ YT+LI + G A +L +M G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P R + + DG G + A ++
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRV 402
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P R LV G GY+ A +++ +MI G P + T+N+LI C +G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGK 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + + G DV +Y ++ ++ +DEA R+ +V G P Y+
Sbjct: 431 MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSS 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + + +A F E+ G PP+ YT LI G +A EM E G
Sbjct: 491 LIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKG 550
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ +GL + A+++
Sbjct: 551 VLPDVVTYSVLINGLNKQARTREAKRL 577
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ G ++ +++ M +G +P+L ++N +I +C+ G
Sbjct: 231 MEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K G D TY LI K G +A + ++ G +P Y
Sbjct: 291 MKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTS 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G + A F +++++G PN YTTL+ + G EA L EM + G
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+P ++ + +G +C + + I LE
Sbjct: 411 FSPSVVTYNALING--HCIAGKMVDAIAVLE 439
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 15/196 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+QG + A + ++M++ G PD T+ +LI C G+
Sbjct: 476 MVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL---------------HN 105
++ ++++ + + G DV TY +LI ++K EA RLL H
Sbjct: 536 LQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
L+E+ N +IKG +G +A F + K H P+ Y +I RGG
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGD 655
Query: 166 FVEAANYLMEMTEMGL 181
+A + EM + G
Sbjct: 656 IRKAYSLYKEMVKSGF 671
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGY-LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
GF P V + ++ + + + A+ + +M++ P++ T+N LI C +G ++
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDV 223
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + K G +V TY LI K ID+ F LL ++ G P Y +I
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ + +E+ +G+ + Y TLI + G F +A EM GL+P
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343
Query: 184 ISRCFDLVTDGLKNCGKHDLA-EKIEQLEV 212
+ + + G + A E ++Q+ V
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRV 373
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V ++ G + ++ A ++ KM+ +G PD T++SLI+ C+
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + ++G D TY LI A G + +A +L + +VE G P Y+
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I G ++ + +A ++ + P+ Y TLI C
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D GF+P V + L+ G AG + A ++ M ++G PD+ ++++++ C+S +
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD 465
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D TY LI + EA L ++ G P Y
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTA 525
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G A +E+ KG P+ Y+ LI + R EA L+++
Sbjct: 526 LINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKL 581
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 55/134 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G G + A Q+ M+++ PD +N +I C+ G++ +Y + K G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
T L+ + K G ++E ++ N++ +++ R G D
Sbjct: 671 FLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 136 CFFSEIKIKGHPPN 149
+E+ G PN
Sbjct: 731 DVLAEMAKDGFLPN 744
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 50/113 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P ++++ G G + A + +M+K G T +L++T+ K G+
Sbjct: 631 MLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGK 690
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V + +V + ++ K+L+ + G +D +L + +DG P
Sbjct: 691 VNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL + A ++ ++MI G P+ TF +LI+ CK+G
Sbjct: 197 MHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGS 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E Y + + G D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 IDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ R G+ V A L EM +G
Sbjct: 317 LIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 377 LKPDNGTYTMIINEF--CKKGDV 397
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G + T+ LI K G ID A ++ G +P Y
Sbjct: 222 MNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLK 378
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A + +M++QG PDL T+N+LI +CK G+++ ++ + G
Sbjct: 247 LIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKG 306
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI K G ++ AF+ ++++ Y +I G R GQ A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAE 366
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
E+ G P+ YT +I + G + L EM G P
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + +++ K G P + +FN+L+ + G+++ + ++
Sbjct: 140 NILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHG 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +++A L ++ +G P + +I G + G D
Sbjct: 200 SGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + E+ +G P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDL 203
G +C + DL
Sbjct: 320 G--SCKEGDL 327
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ + Y +S ++++ G L FN L+ CK GE+ ++ + K G
Sbjct: 107 VLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + G P Y+ +I G + + +DA
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ G PN +TTLI + G A EM G +P ++ + GL
Sbjct: 227 ELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAEKIEQL-EVSLRSV 217
C + DL + + + E+S++ +
Sbjct: 287 --CKEGDLKQAQDLIDEMSMKGL 307
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + K D Y LI + + G A ++L ++ G P Y
Sbjct: 327 LETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
II ++G E++ GH P
Sbjct: 387 IINEFCKKGDVKMGSKLLKEMQRDGHVP 414
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 71/189 (37%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E K + Y + + G
Sbjct: 72 LITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G + A + + + G P + ++ G R G D+ F
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 192 RLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLA 204
G DLA
Sbjct: 252 CKTGSIDLA 260
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V+ +L+ + NAG L+ A+ +++ M +G PD T+N+ + +CK+G
Sbjct: 237 MISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGR 296
Query: 61 VEFCVEMYYSVCKLGS-CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLY 118
V+ +E ++ G+ + Y LI + AG +E F+ ++E +P LY
Sbjct: 297 VDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLY 356
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I+G G+ +DAF FF E+K KG P+ Y TL+ G A + + EM
Sbjct: 357 TIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVR 416
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ GL G A ++ ++MI +G P+++T L+ ++C +G+
Sbjct: 202 MVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQ 261
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP-SLYA 119
++ + +S+ G D TY + + KAG +DEA L L G Y+
Sbjct: 262 LKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYS 321
Query: 120 PIIKGAFRRGQFDDAF-CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G F G++++ F C+ ++ P+ +YT +I C GR +A + EM E
Sbjct: 322 CLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKE 381
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G TP + C++ + L + G D A +
Sbjct: 382 KGFTPDTFCYNTLLKALCDAGDLDGARSL 410
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 15/185 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL--------------E 46
M + G +P V ++L+ GL A LE A+ + KM + G++P L E
Sbjct: 449 MVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVRDSE 507
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T L+E++C+SG+V ++ + G DV TY L+ + K +D A RL L
Sbjct: 508 TLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFREL 567
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G Y +I R +++DA F +I G P+ P+Y +++ R +
Sbjct: 568 QVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKL 627
Query: 167 VEAAN 171
+A N
Sbjct: 628 SQAIN 632
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 48/231 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF P + L++ L +AG L+ A+ ++++M++ D+ T+ ++I +CK
Sbjct: 379 MKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQL 438
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA--------------------------- 93
V+ ++++ + ++G V TY +LI + +A
Sbjct: 439 VDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTL 498
Query: 94 ---------------------GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G + +A++LL +++ G P Y ++ G + D
Sbjct: 499 GANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLD 558
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A F E+++KG P + Y TLI R R+ +A ++ G TP
Sbjct: 559 GALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTP 609
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + ++++G AG A ++M ++G PD +N+L++ +C +G+++
Sbjct: 350 SPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARS 409
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + D+ TY +I + K ++DEA ++ +VE G +P Y +I G +
Sbjct: 410 LMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLY 469
Query: 127 RRGQFDDAFCFFSEIKIKGHPP--------------NRPVYTTLITMCGRGGRFVEAANY 172
R + ++A F ++++ +P + + + +MC + G+ ++A
Sbjct: 470 RAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMC-QSGQVLKAYKL 528
Query: 173 LMEMTEMGLTPISRCFDLVTDGL 195
L + + G+ P ++ + +GL
Sbjct: 529 LRGIIDSGVVPDVVTYNTLLNGL 551
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSG-EVE 62
G PP + L+ +AG A + ++M + G P +N+++ + SG V
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ +Y + G + +TY +LI + K G +A +L ++ G P + ++
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
GQ +A ++ KG PP+ Y ++ + GR EA L + G
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTF 313
Query: 183 PIS-RCFDLVTDGLKNCGKHD-----LAEKIEQLEVS 213
+ + + + DGL G+++ E +EQ +VS
Sbjct: 314 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVS 350
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CKSG
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + YT LI+ + GR+++A L EM G
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAG 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 366 LKPDTGTYTMIINEF--CKKGDV 386
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 151 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 210
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K+G +D A + ++ +P Y
Sbjct: 211 MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNT 270
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 271 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEN 330
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G++ AEK+ E L L+
Sbjct: 331 IRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLK 367
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G +G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 221 MLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 280
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 281 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTA 340
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G++ DA E+ G P+ YT +I + G + L EM G
Sbjct: 341 LISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 400
Query: 181 LTPISRCFDLVTDG 194
P ++++ +G
Sbjct: 401 HVPSVVTYNVLMNG 414
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ ++ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 96 VLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWG 155
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + G P Y+ +I G + + DDA
Sbjct: 156 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 215
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 216 ELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 276 --CKKGDLKQ 283
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + N + K G P + +FN+L+ + G+++
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 179
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L +++ G P + +I G
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 239
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 240 HCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 300 KITYTTLIDGC--CKEGDLETAFEH 322
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 61 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECG 120
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + + G P + ++ G R G D+ F
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 240
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 241 CKSGRVDLAMEI 252
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + L G + A ++ ++ +G D T+N LI +CK+G
Sbjct: 1356 MLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGN 1415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D TY LI A + G++ EA ++ +N++ DG P +
Sbjct: 1416 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 1475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II RRG A+ +F ++ +G PN Y LI R GR A+++ EM E G
Sbjct: 1476 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 1535
Query: 181 LTPISRCFDLVTDGLKNC 198
L + L+ DG NC
Sbjct: 1536 LVANKYTYTLLIDG--NC 1551
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 6/216 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + ++ GLL +G +E+A+ +M G PD+ T+NSL+ CK+G
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 1275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G V TY ILI + G ++EA L + E G P Y
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI---TMCGRGGRFVEAANYLMEMT 177
++KG+ A FF E+ KG P+ Y T I + G R E LM
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLM--- 1392
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
G++ + ++++ GL G A++++ VS
Sbjct: 1393 LEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 1428
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ GL G L+ AK++ KM+ G PD T+ LI C+ G + +++ ++
Sbjct: 1404 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMIS 1463
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G T+ ++I A + G + A+ ++E+G P Y +I R G+
Sbjct: 1464 DGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 1523
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A F E+ +G N+ YT LI + G + +A + EM + G+ P
Sbjct: 1524 ASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 1573
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL G ++ + +M +G P + T+N++I + +SG VE + + +G
Sbjct: 1196 LITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMG 1255
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY L+ KAG + EA L +L G P Y +I G R G ++A
Sbjct: 1256 LLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEAR 1315
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ +G PN YT L+ A + EM GL P CF T
Sbjct: 1316 ILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQP--DCFAYNTRIC 1373
Query: 196 KNCGKHDLAEKIEQLEV 212
D+A E EV
Sbjct: 1374 AELILGDIARAFELREV 1390
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M + G P + + L+ L G + ++ +M +GS P+ T+N +I + +
Sbjct: 1110 MLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 1169
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G++E E+ + +L A TY LI + G + + + L + +G P Y
Sbjct: 1170 GDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTY 1228
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G + A F+E++ G P+ Y +L+ + G EA ++
Sbjct: 1229 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 1288
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAE 205
GL P ++++ DG C DL E
Sbjct: 1289 AGLAPTVLTYNILIDGY--CRLGDLEE 1313
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 2/173 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G L A+++ N MI G P TF +I C+ G
Sbjct: 1426 MVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGN 1485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + TY +LI A+ + G A H ++E G Y
Sbjct: 1486 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTL 1545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+I G + G ++DA F+ E+ G P+ + L+ G G YL
Sbjct: 1546 LIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLK--GFDGHVHHTIEYL 1596
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V+ + +++ L +A + + +M++ G +P + T+N+L+++ K G
Sbjct: 1075 MASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGR 1134
Query: 61 VEFCVEMYYSVCKLGS--CADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSL 117
+ + + GS + TY ++I +++ G ++EA L+ + + + F
Sbjct: 1135 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT-- 1192
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY-LMEM 176
Y P+I G RG + E++ +G P Y +I + G VEAA EM
Sbjct: 1193 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSG-LVEAAQVKFAEM 1251
Query: 177 TEMGLTPISRCFDLVTDGLKNCG 199
MGL P ++ + +G G
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAG 1274
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 71/183 (38%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G AG L+ A + + + G P + T+N LI+ C+ G+
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G +V TY IL+ + A ++ G P Y
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNT 1370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G AF + ++G + Y LI + G +A M+M G
Sbjct: 1371 RICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 1430
Query: 181 LTP 183
L P
Sbjct: 1431 LQP 1433
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 3/173 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M G PD++ N ++ + + + ++ + +LG + TY L+ + K G
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133
Query: 95 MIDEAFRLLHNLVEDGHNPFPS--LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
D+ LL + G P+ Y +I G R+G ++A +++ +
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF-T 1192
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
Y LIT G + + +EM G+ P ++ + GL G + A+
Sbjct: 1193 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQ 1245
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M G P + LV AG L+ A+++V+ M ++G + P+L TFNS++ +CK+G
Sbjct: 178 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 237
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E +++ + + G DV +Y L+ K G + E+ + + + G P +
Sbjct: 238 RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 297
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G + A ++++ +G N +T LI + G +A + EM +
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 357
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
G+ P C++ + +G G+ DLA E I ++E
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL AG +E A+++ ++M+++G PD+ ++N+L+ CK G + + ++ + + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV T+ LI A KAG +++A L+ + E G + +I G ++G DDA
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E++ G P+ Y LI + GR A + EM + P + + G
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 196 KNCGKHDLAEKIEQ 209
G D A ++ Q
Sbjct: 409 CKVGNLDSAFQLNQ 422
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G+L+ A V +M K G P + +N+LI CK G ++ E+ +
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +I K G +D AF+L +++ G P Y+ +I+G + +DA
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + G P+ YTTLI + G +A + EM G+ P + ++ +GL
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Query: 196 KNCGKHDLAEKI 207
+ A ++
Sbjct: 514 SKSARTKEAHRL 525
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 9/190 (4%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V + ++ L +A L SA++ ++ M++ G P++ T+N L+ +C G +E
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPII 122
V + + G + TY L+ A +AG +D A R++ + E+G N P+L + ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG-NAKPNLVTFNSMV 230
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ + A F E+ +G P+ Y TL++ + G E+ EMT+ GL
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 183 PISRCFDLVT 192
P D+VT
Sbjct: 291 P-----DVVT 295
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ G G L + + ++M ++G PD+ TF SLI CK+G
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + + G + T+ LI K G +D+A + + + G P Y
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A E++ K P+ Y+T+I+ + G A +M + G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P + + + GL C + L + E E L+
Sbjct: 429 VLPDAITYSSLIRGL--CEEKRLNDACELFENMLQ 461
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G G ++ A++++ +M + PD+ T++++I CK G
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G D TY LI + + +++A L N+++ G P Y
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + G + A E+ KG P+ Y+ LI + R EA L ++
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L++GL L A ++ M++ G PD T+ +LI+ CK G
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
VE + ++ + + G DV TY +LI +SK+ EA RLL L + P
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 543
Query: 114 ---------FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
F S+ A ++KG +G +A + + + + VY+ LI RGG
Sbjct: 544 LMLCCSKAEFKSVVA-LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 602
Query: 165 RFVEAANYLMEMTEMGLTPIS 185
+A ++ +M G +P S
Sbjct: 603 NVRKALSFHKQMLRSGFSPNS 623
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++ G G L+SA Q+ KM+K+G PD T++SLI +C+
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ ++ +LG D TY LI K G +++A L ++ G P Y+
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+I G + + +A ++ + P+ Y L+ C +
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 15/191 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G G +E A + ++MI++G PD+ T++ LI + KS
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA---------------GMIDEAFRLLHN 105
+ + + + D Y L+ SKA G++ EA ++ +
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+++ S+Y+ +I G R G A F ++ G PN +L+ G
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 166 FVEAANYLMEM 176
VEA N + ++
Sbjct: 639 VVEADNAIQDL 649
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + + L++GL G L+ A +N+++++G PD T+N +I CK G+
Sbjct: 511 MIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGD 570
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + DV T L+ + G +D+A +L + VE G Y
Sbjct: 571 LENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNT 630
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + G D A FF++++ +G P+ Y +++ GR EA N L ++ E G
Sbjct: 631 LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG 690
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG + +++++GL G LE A +NKM G PD+ T+N+LI CK+G
Sbjct: 371 MREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGN 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G D T ++ + K +EA LL + + G P Y
Sbjct: 431 IAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGT 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ F+ + A + E+ K P+ Y TLI R GR EA + L E+ E G
Sbjct: 491 VMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKG 550
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P ++++ C + DL
Sbjct: 551 LVPDDTTYNIIIHAY--CKEGDL 571
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + F P V + L+ GL G L+ A ++ +++G D+ T+N+LI+T+CK G+
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGD 640
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D TY +++ A+S+AG +EA +LH L E G S +P
Sbjct: 641 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG-TLSQSFSSP 699
Query: 121 IIKGAFRRGQFDDAFC---FFSEIKIKGHPPNRP--VYTTLITMCGRGGRFVEAANYLME 175
++K + D+A +E + +P + YT L+ G+F EA L E
Sbjct: 700 LLKPS----SVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDE 755
Query: 176 MTEMGLTPISRCFDLVTDGL 195
M + G++ S + + +GL
Sbjct: 756 MMQKGMSVDSSTYITLMEGL 775
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 7 NPPVRG--RDLLVQGLLNAGYL-----ESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
+PP RG D + G + A Y E A ++ ++MI++ P + T+N+LI+ + + G
Sbjct: 475 SPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMG 534
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ ++ + + G D +TY I+I A K G ++ AF+ + +VE+ P
Sbjct: 535 RLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCN 594
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTE 178
++ G G+ D A F KG + Y TLI TMC + G A ++ +M
Sbjct: 595 TLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMC-KDGDVDTALHFFADMEA 653
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GL P + +++V L G+ + A+ +
Sbjct: 654 RGLQPDAFTYNVVLSALSEAGRTEEAQNM 682
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D G P V + L+ AG + A ++++M+++G D T N+++ +CK
Sbjct: 406 MADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKR 465
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + S + G D +Y ++ A K + A RL ++E P S Y
Sbjct: 466 YEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNT 525
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG R G+ +A +E+ KG P+ Y +I + G A + +M E
Sbjct: 526 LIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS 585
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + +GL GK D A K+
Sbjct: 586 FKPDVVTCNTLMNGLCLNGKLDKALKL 612
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 43 PDLETFNSLIETICKSGEV--EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
P L+ N+++ + +S + ++ + S+ L + T+ +L+ G + +A
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224
Query: 101 RLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
L + G +P Y ++ R+G +A + +K G P RP Y TL++
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
R G +A + MT G P ++++ GL GK D A +++
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLK 332
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+LLV + G L A ++ M G PD T+N+L+ C+ G + + + K
Sbjct: 208 NLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKK 267
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G TY L+ A ++ G I +A +++ + +G P Y + G + G+ D+
Sbjct: 268 DGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDE 327
Query: 134 AFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
AF E++ G P+ Y TL C + +A L EM E G+ ++V
Sbjct: 328 AFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVI 387
Query: 193 DGL 195
GL
Sbjct: 388 KGL 390
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 36/213 (16%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + L+ G L A+ ++ +M K G P T+N+L+ + G ++
Sbjct: 234 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQA 293
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF------------------------ 100
++ ++ G D+ TY +L + +AG +DEAF
Sbjct: 294 TKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLAD 353
Query: 101 ------------RLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
RLL + E G + +IKG + G+ + A +++ G P
Sbjct: 354 ACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAP 413
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ Y TLI + G +A + EM GL
Sbjct: 414 DVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 1/157 (0%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P+ TFN L+ T C G + + ++ G D TY L+ A + GM+ EA L
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L + +DG P Y ++ R G A + G P+ Y L +
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321
Query: 163 GGRFVEAANYLMEMTEMG-LTPISRCFDLVTDGLKNC 198
G+ EA EM +G L P ++ + D C
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKC 358
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P L+ GL G + A ++V++M++ G PDL T N+L+ +C SG+
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G + TY ++ + K+G A LL + E Y+ II G
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G D+AF F+E+++KG N Y LI GR+ + A L +M + + P
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
F ++ D GK AE++ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHK 357
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + ++L+ G NAG + +++ MIK+ +P++ TF+ LI++ K G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G D TY LI K +D+A +++ +V G +P +
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DD F ++ ++G + Y TLI G+ A EM
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA----EKIEQLEVSL 214
+ P + ++ DGL + G+ + A EKIE+ ++ L
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + LV GL +G A +++KM++ G P+ T+ ++ +CKSG+
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + + D Y I+I + K G +D AF L + + G Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G++DD ++ + PN ++ LI + G+ EA EM G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ P + + + DG D A ++ L VS
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+QG G L AK++ +M+ + P++ T+ L++ +C +GE
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E++ + K D+ Y I+I + A +D+A+ L +L G P Y
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F +++ GH P+ Y LI G ++ + E+ G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 181 L----TPISRCFDLVTDG 194
+ I D+++DG
Sbjct: 609 FSVDASTIKMVIDMLSDG 626
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G +L+ A QMV+ M+ +G DP++ TFN LI CK+
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + G AD TY LI + G ++ A L +V P Y
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F +I+ + +Y +I + +A + + G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + ++++ GL C K L+E
Sbjct: 539 VKPGVKTYNIMIGGL--CKKGPLSE 561
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P +R ++L+ G A ++ ++ KM +G D T+N+LI+ C+ G+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + ++ TYKIL+ + G ++A + + + +Y
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA+ F + +KG P Y +I + G EA +M E G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P ++++ + G D + ++ +E
Sbjct: 574 HAPDGWTYNILIRA--HLGDGDATKSVKLIE 602
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL G L++A + N+M +G ++ T+N LI C +G + ++ + K
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V T+ +LI + K G + EA L ++ G P Y +I G + D A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ KG PN + LI + R + +M+ G+ + ++ + G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 195 LKNCGKHDLAEKIEQLEVS 213
GK ++A+++ Q VS
Sbjct: 448 FCELGKLNVAKELFQEMVS 466
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G A +++ KM ++ D ++ +I+ +CK G ++ ++ + G ++ T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y ILI AG D+ +LL ++++ NP ++ +I + G+ +A E+
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ YT+LI + +A + M G P R F+++ +G C +
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY--CKANR 418
Query: 203 LAEKIEQL-EVSLRSV 217
+ + +E ++SLR V
Sbjct: 419 IDDGLELFRKMSLRGV 434
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M +G +L T + +I C+ ++ + KLG + T+ LI +
Sbjct: 110 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 169
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G + EA L+ +VE GH P ++ G G+ +A ++ G PN
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y ++ + + G+ A L +M E + + + ++ DGL G D A
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 5/209 (2%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L GL++ + A + MI P + F+ L I K+ + + + + +
Sbjct: 57 RERLRSGLVDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME 115
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G ++ T I+I + + AF + +++ G+ P ++ +I G G+
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A + GH P+ TL+ G+ EA + +M E G P + + V
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 193 DGLKNCGKHDLA----EKIEQLEVSLRSV 217
+ + G+ LA K+E+ + L +V
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAV 264
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V+ ++++ GL G L A+ + KM + G PD T+N LI G+
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
V++ + + G D ST K++I +S G + ++F
Sbjct: 597 SVKLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKSF 632
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 16/220 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ + NP V ++LV G ++ AK + M+KQG PD+ T+NSL++ C E
Sbjct: 302 MTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNE 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ G A+V +Y I+I K M+D+A +L + P Y+
Sbjct: 362 VNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSS 421
Query: 121 IIKGAFR----------------RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+I G + RGQ D ++K +G PN YT LI +GG
Sbjct: 422 LIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGG 481
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
R +A N ++ G + ++ G N G D A
Sbjct: 482 RLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEA 521
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G VR +++ ++ A ++ +M + P++ T++SLI+ +CKSG
Sbjct: 372 MSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGR 431
Query: 61 VEFCVEMYYSVCKLGSCADVST----------------YKILIPAVSKAGMIDEAFRLLH 104
+ + +E+ + G D+ T Y ILI + K G +++A +
Sbjct: 432 ISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFE 491
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+L+ G+N + Y +I G +G FD+A S++K PN Y +I
Sbjct: 492 DLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDND 551
Query: 165 RFVEAANYLME 175
+A N+ ++
Sbjct: 552 ENDKAENFFVK 562
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + ++M+ + PD+ T+N+LI C G+++ + ++ + DV T+ IL+
Sbjct: 260 AFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 319
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A K G + EA L +++ G P Y ++ + + A F+ + +G
Sbjct: 320 AFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTA 379
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
N Y+ +I + +A EM + P + + DGL G+
Sbjct: 380 NVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGR 431
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 65/151 (43%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P+L +N++I+++CK ++Y + DV+TY LI G + +A L
Sbjct: 239 PNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGL 298
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ + + NP + ++ + G+ +A + + +G P+ Y +L+
Sbjct: 299 FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCL 358
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+A + M+ G+T R + ++ +
Sbjct: 359 VNEVNKAKSIFNTMSHRGVTANVRSYSIMIN 389
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 5/201 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P ++ + GL A ++ A Q++ KM ++ P T+ +L++ + K+G ++
Sbjct: 37 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 96
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G+ + TY ++I +SKAG ++EA R+ +++ +G P +Y +IKG
Sbjct: 97 MAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKG 156
Query: 125 AFRRGQFDDAFCFFSEIKIKGHP----PNRPVYTTLITMCGRGGRFVEAANYL-MEMTEM 179
+ G+ ++A+ + E + H P+ YT+LI + GR +EA E E
Sbjct: 157 LCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVER 216
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G P + + + DGL G+
Sbjct: 217 GFIPDAVTYTSIIDGLCKLGR 237
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P LV GLL AG L+ A ++ +M+++G+ P L+T+ +I+ + K+G
Sbjct: 68 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGR 127
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN----PFPS 116
VE ++ + G D Y LI + K+G +EA+ L H+ P
Sbjct: 128 VEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVV 187
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKI-KGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y +I G + G+ +A F + + +G P+ YT++I + GR E E
Sbjct: 188 TYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 247
Query: 176 MTEMGLTPISRCFDLVTDGL 195
M G P + + + DG
Sbjct: 248 MRNRGYEPDAVTYAALIDGF 267
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ P L+ G + A + A ++ +M++ G+ T+N +++ +CK+G
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + G A V TY L+ G + A L +++ G P Y
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
II+G R G+ A+ +F ++ + P+ + + +C R + M
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
G +P + ++ DG+ G ++A +I + VS
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVS 461
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 4/193 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + +++++GL AG L A K++++ PD+ TFN+ + +C+ +
Sbjct: 353 MLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLD 412
Query: 61 -VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V VE++ S+ G+ ++ +Y IL+ + +AG ++ A + +V G P ++
Sbjct: 413 TVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFN 472
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ G+ D+A F E++ + P+ Y +L+ R R EA M
Sbjct: 473 TLIRWLCIAGRVDEALEVFRELE-RRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQ 531
Query: 180 GLTPISRCFDLVT 192
G P R +DL
Sbjct: 532 GCAP--RHYDLTV 542
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
PD+ F +I +C+ ++ + + G D TY + I + KA +D+AF+L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L + E P Y ++ G + G+ D+A ++ KG+ P YT +I +
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
GR EA ++M G P + + + GL GK + A
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEA 166
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 1/194 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVN-KMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V L+ GL AG + A+Q+ + + +++G PD T+ S+I+ +CK G VE E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + G D TY LI KA MI +A R+ +++ G Y I+ G
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ +A+ F ++ +G Y+ L+ G A M + G P
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363
Query: 187 CFDLVTDGLKNCGK 200
++++ GL GK
Sbjct: 364 SYNIIIRGLCRAGK 377
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++GF P ++ GL G +E + ++M +G +PD T+ +LI+ K+ +
Sbjct: 215 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIP 274
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+Y + + G+ TY I++ + KAG + EA+ + E G Y+ ++
Sbjct: 275 KAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 334
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G G A F + +G PN Y +I R G+ +A Y ++ + L
Sbjct: 335 DGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC 394
Query: 183 PISRCFDLVTDGLKNCGKHD-LAEKIEQLE 211
P F+ GL C + D +++ +E E
Sbjct: 395 PDVYTFNAFLHGL--CQRLDTVSDGVELFE 422
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 42/248 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P ++ +++ GL AG +E A+++ M+ G PD + +LI+ +CKSG+
Sbjct: 103 MVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGK 162
Query: 61 VEFCVEMYYS-----------------------VCKLGSC-----------------ADV 80
E +Y +CK G D
Sbjct: 163 PEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDA 222
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
TY +I + K G ++E H + G+ P YA +I G + A + +
Sbjct: 223 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 282
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ G + Y ++ + GR EA + M E G + + DG C +
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF--CSE 340
Query: 201 HDLAEKIE 208
+++ +E
Sbjct: 341 GNVSAAVE 348
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
D+ + ++I + + +DEAF +L V G P Y I G + + DDAF
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
++ K P YT L+ + GR EA L +M E G +P + + +V DGL
Sbjct: 66 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125
Query: 199 GKHDLAEKI 207
G+ + A +I
Sbjct: 126 GRVEEARRI 134
>gi|255561341|ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539072|gb|EEF40668.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 458
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P D+ V+ L +AG + A ++V ++ + S PD T+N L++ +CK
Sbjct: 145 MVNNGFMPTQVTVDIAVRALCSAGKEDDAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRA 204
Query: 61 VEFCVEMYYSVCKLGSCADVS----TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ +Y + ++ S D+ TY ILI V + + EA RLL L E G P
Sbjct: 205 LS---NVYSFIDEMRSSFDLEPNLVTYTILIDNVCNSKNLREAMRLLGILRECGFKPDCF 261
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+Y I+KG + DA F ++K +G P+ Y TLI +GGR EA YL M
Sbjct: 262 VYNTIMKGYCMLSKGSDAIQVFKKMKEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIM 321
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
E G P + + + +GL C K D + LE
Sbjct: 322 VESGHFPDAVTYTSLMNGL--CRKGDALGALALLE 354
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
P + +L+ + N+ L A +++ + + G PD +N++++ C + +
Sbjct: 221 LEPNLVTYTILIDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAI 280
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+++ + + G D+ TY LI +SK G + EA R L +VE GH P Y ++ G
Sbjct: 281 QVFKKMKEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGL 340
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
R+G A ++++KG PN Y TL+
Sbjct: 341 CRKGDALGALALLEDMEMKGCSPNSCTYNTLL 372
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + L+ GL G + AK+ + M++ G PD T+ SL+ +C+ G+
Sbjct: 286 MKEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGD 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G + TY L+ + K ++++ L + + E G + YA
Sbjct: 346 ALGALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYAT 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
++ R G+ +A+ F N YTTL
Sbjct: 406 FVRALCREGKVAEAYEVFDYAVESKSLTNAAAYTTL 441
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V LV GL N+G A ++ M K+ PD+ TFN+LI+ K G+
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y + ++ ++ TY LI G +DEA ++ + + G P Y
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DDA F E+ KG N YTTLI G+ G+ A M G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P R ++++ L GK
Sbjct: 383 VPPNIRTYNVLLHCLCYNGK 402
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + L+ G +E A MVN+M++ G PD+ + ++I+++CK+G
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + ++ + G DV Y L+ + +G +A LL + + P +
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+F DA ++E+ PN YT+LI G EA M G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + +G C K D A KI
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKI 339
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 3/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ + P V + L+ + G A+++ N+MI+ P++ T+ SLI C G
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +M+Y + G DV Y LI K +D+A ++ + + + G Y
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL--MEMTE 178
+I+G + G+ + A FS + +G PPN Y L+ G+ +A M+ E
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 179 M-GLTPISRCFDLVTDGLKNCGKHDLA 204
M G+ P ++++ GL GK + A
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ L G++ A + ++M G PD+ + SL+ +C SG
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K DV T+ LI A K G +A L + ++ P Y
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G D+A F ++ KG P+ YT+LI + + +A EM++ G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
LT + + + G GK ++A+++ VS
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + KM+K G +PD+ TF SLI C +E + M + ++G DV Y +I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
++ K G ++ A L + G P +Y ++ G G++ DA + + P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + LI + G+F++A EM M + P
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG L+QG G A+++ + M+ +G P++ T+N L+ +C +G+
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 61 VEFCVEMYYSVCKL---GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
V+ + ++ + K G ++ TY +L+ + G +++A + ++ + +
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y II+G + G+ +A F + KG PN YTT+I+ R G EA +M
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Query: 178 EMGLT 182
E G++
Sbjct: 523 EDGVS 527
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G DL T N L+ C+S + + KLG D+ T+ LI ++EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+++ +VE G P +Y II + G + A F +++ G P+ +YT+L+
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GR+ +A + L MT+ + P F+ + D GK AE++
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R++L GL + + E A + M++ P + F L+ I K + + + + +
Sbjct: 41 REILRNGLHSLQFNE-ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+G D+ T +L+ ++ A L +++ G P + +I G + +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A +++ G P+ +YTT+I + G A + +M G+ P + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 193 DGLKNCGKHDLAEKI 207
+GL N G+ A+ +
Sbjct: 220 NGLCNSGRWRDADSL 234
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M G P + LV AG L+ A+++V+ M ++G + P+L TFNS++ +CK+G
Sbjct: 178 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 237
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E +++ + + G DV +Y L+ K G + E+ + + + G P +
Sbjct: 238 RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 297
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G + A ++++ +G N +T LI + G +A + EM +
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 357
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
G+ P C++ + +G G+ DLA E I ++E
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL AG +E A+++ ++M+++G PD+ ++N+L+ CK G + + ++ + + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV T+ LI A KAG +++A L+ + E G + +I G ++G DDA
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E++ G P+ Y LI + GR A + EM + P + + G
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 196 KNCGKHDLAEKIEQ 209
G D A ++ Q
Sbjct: 409 CKVGNLDSAFQLNQ 422
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G+L+ A V +M K G P + +N+LI CK G ++ E+ +
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +I K G +D AF+L +++ G P Y+ +I+G + +DA
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + G P+ YTTLI + G +A + EM G+ P + ++ +GL
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Query: 196 KNCGKHDLAEKI 207
+ A ++
Sbjct: 514 SKSARTKEAHRL 525
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 9/190 (4%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V + ++ L +A L SA++ ++ M++ G P++ T+N L+ +C G +E
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPII 122
V + + G + TY L+ A +AG +D A R++ + E+G N P+L + ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG-NAKPNLVTFNSMV 230
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ + A F E+ +G P+ Y TL++ + G E+ EMT+ GL
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 183 PISRCFDLVT 192
P D+VT
Sbjct: 291 P-----DVVT 295
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ G G L + + ++M ++G PD+ TF SLI CK+G
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + + G + T+ LI K G +D+A + + + G P Y
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A E++ K P+ Y+T+I+ + G A +M + G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P + + + GL C + L + E E L+
Sbjct: 429 VLPDAITYSSLIRGL--CEEKRLNDACELFENMLQ 461
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G G ++ A++++ +M + PD+ T++++I CK G
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G D TY LI + + +++A L N+++ G P Y
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + G + A E+ KG P+ Y+ LI + R EA L ++
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L++GL L A ++ M++ G PD T+ +LI+ CK G
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
VE + ++ + + G DV TY +LI +SK+ EA RLL L + P
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 543
Query: 114 ---------FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
F S+ A ++KG +G +A + + + + VY+ LI RGG
Sbjct: 544 LMLCCSKAEFKSVVA-LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 602
Query: 165 RFVEAANYLMEMTEMGLTPIS 185
+A ++ +M G +P S
Sbjct: 603 NVRKALSFHKQMLRSGFSPNS 623
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++ G G L+SA Q+ KM+K+G PD T++SLI +C+
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ ++ +LG D TY LI K G +++A L ++ G P Y+
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+I G + + +A ++ + P+ Y L+ C +
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 15/191 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G G +E A + ++MI++G PD+ T++ LI + KS
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA---------------GMIDEAFRLLHN 105
+ + + + D Y L+ SKA G++ EA ++ +
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+++ S+Y+ +I G R G A F ++ G PN +L+ G
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 166 FVEAANYLMEM 176
VEA N + ++
Sbjct: 639 VVEADNAIQDL 649
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ F +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + + L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF ++ + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 383 LKPDARTYTMIINEF--CKKGDVWK 405
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN ++TTLI + GR A +M L P ++ + GL
Sbjct: 233 ELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + + LI K G +D A + ++ P Y
Sbjct: 228 MDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G E+ +KG P++ YTTLI C + G A + +M +
Sbjct: 288 LIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 384
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 VHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P ++ +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G + + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KITYTTLIDGC--CKEGDLDTAFEH 339
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P ++ L+ L+ A L+ + ++ + + G PD+ F+++I CK
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + KLG +V TY +I + K+G +DEA+R +V++ +P Y+
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSV 331
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + + D+A C E+ G PN VY TLI + G EA +M G
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391
Query: 181 LTPISRCFDLVTDGL 195
++P S + + G
Sbjct: 392 ISPNSVTLNSLIQGF 406
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V +++ G A +E + ++N+++ + + + +NSLI C +G +
Sbjct: 601 GYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAA 660
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G +TY L+ + G++D+A LL + ++G P Y II G
Sbjct: 661 FRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGG 720
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ GQ + E+ PN+ YT +I + G+ EAA L EMTE G+ P
Sbjct: 721 YSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPD 780
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ T+GL GK + A K+
Sbjct: 781 AVTYNAFTNGLCKEGKVEEAFKV 803
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P + + L+ GL AG ++ +++ M+++G D T+N+LI CK G+V+
Sbjct: 495 KGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKE 554
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + K G D+ T+ +L+ + A IDEA RL H ++G+ P Y +I
Sbjct: 555 GFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMID 614
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++ +E+ K N VY +LI G A +M G+
Sbjct: 615 GYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLL 674
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ + GL N G D A+ +
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHL 698
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G G ++ ++ +M+K+G PD+ TFN L+ +C + +++ +++ K
Sbjct: 540 NTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKK 599
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +V TY ++I KA ++E LL+ LV +Y +I+ G +
Sbjct: 600 NGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNA 659
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF ++K +G + Y++L+ G +A + L EM + GL P C+ +
Sbjct: 660 AFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIG 719
Query: 194 GLKNCGKHDLAEKIEQ 209
G G+ + + Q
Sbjct: 720 GYSKLGQMNKVNIVLQ 735
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV GL AG A ++ +++ +G P++ T N+LI +CK+G ++ +++ + + G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI K G + E F L +V+ G P + ++ G + D+A
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ E K G+ PN Y +I + + E N L E+ L
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKL 637
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ GL +G L+ A + KM+K+ P L T++ I + K +
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + +LG + Y LI K G I EA ++ +++ G +P
Sbjct: 342 IDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNS 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + Q A E+ +G P N+ ++ +I RFV A +++ EM
Sbjct: 402 LIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461
Query: 181 LTPISRCFDLVTDGLKNCGKH 201
L P + GL GK
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQ 482
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ + A + +KM K G P++ T+N++I +CKSG ++
Sbjct: 251 GIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEA 310
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ K + TY + I + K IDEA +L + E G P +Y +I G
Sbjct: 311 YRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDG 370
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G +A ++ KG PN +LI + + +A N L EM GL
Sbjct: 371 YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430
Query: 185 SRCFDLVTDGL 195
F +V + L
Sbjct: 431 QGSFSMVINWL 441
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + + + K+G P L+T L+ ++ K+ E++ E+Y +C G DV + +I
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A K D+A L + + G P Y II G + G+ D+A+ F ++ + P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y+ I + + EA L EM+E+G P ++ + DG G A KI
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKI 383
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-- 58
MS+ GF P + L+ G G + A ++ + M+ +G P+ T NSLI+ CKS
Sbjct: 352 MSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQ 411
Query: 59 -GEVEFCVEMYYSV---CKLGSCADVSTY-----------------------------KI 85
G+ E +E GS + V +
Sbjct: 412 IGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTT 471
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + KAG EA L L+ G P +I G + G + ++ +G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
+R Y TLI+ C + G+ E EM + G+ P F+L+ GL N K D A
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591
Query: 206 KI 207
++
Sbjct: 592 RL 593
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL N G ++ AK ++++M K+G P++ + ++I K G++ + +
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY I+I K G EA +LL+ + E G P Y G + G+ ++AF
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAF 801
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMC 160
E+ + YTTLI C
Sbjct: 802 KVCDEMSSGAVCLDEITYTTLIDGC 826
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 90/210 (42%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + + GL+ ++ A ++ +M + G P+ +N+LI+ CK G
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + T LI K+ I +A +L ++ G ++
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + +F A F E+ ++ PN + TTL++ + G+ EA + G
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P + + GL C ++ E ++ L
Sbjct: 497 FVPNIVTSNALIHGL--CKAGNMQETLKLL 524
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +P +++ G G + A +++N+M ++G PD T+N+ +CK G+
Sbjct: 737 MSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGK 796
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILI 87
VE ++ + C D TY LI
Sbjct: 797 VEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 64/142 (45%)
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
F +++ + K G + T L+ ++ KA + +++ + + G P L++ +I
Sbjct: 204 FAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMI 263
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ + DDA FS+++ G PN Y +I + GR EA + +M + ++
Sbjct: 264 NAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVS 323
Query: 183 PISRCFDLVTDGLKNCGKHDLA 204
P + + +GL K D A
Sbjct: 324 PSLITYSVFINGLIKLEKIDEA 345
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++ G G + ++ +M P+ T+ +I+ CK G+
Sbjct: 702 MRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGK 761
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
+ ++ + + G D TY + K G ++EAF++
Sbjct: 762 TKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P D L+ G A L+ A+++ +KM+++G +P++ T++SLI+ + K ++
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLV 734
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + ++ Y +I +SK DEA++L+ + E G P Y +I G
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ G+ D F E+ KG PN YT LI C G EA L EM +
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ L A + A ++ MI +G P++ T+ +LI+ CKSG
Sbjct: 550 MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGN 609
Query: 61 VEFC---------------VEMYYSV-CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+E V+MY+ + + +V TY L+ + KA + +A LL
Sbjct: 610 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 669
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ DG P +Y +I G + + D+A F ++ +G+ PN Y++LI +
Sbjct: 670 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDK 729
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R L +M E P + + DGL K D A K+
Sbjct: 730 RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV GL A ++ A+ ++ M G +P+ +++LI+ CK+ +++ E+
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ + + G +V TY LI + K +D ++L ++E+ P +Y +I G +
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ D+A+ ++ KG PN YT +I G+ G+ + EM G P
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLE-------------- 46
M KG P V L+ G +G +E A Q+ +M PD++
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPN 644
Query: 47 --TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
T+ +L++ +CK+ +V+ ++ ++ G + Y LI KA +DEA + H
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+VE G+NP Y+ +I F+ + D S++ PN +YT +I +
Sbjct: 705 KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVA 764
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+ EA ++ M E G P + + DG GK D
Sbjct: 765 KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVD 802
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G E A +++++M+ G PD T++ +I +C + VE ++ + G DV TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
ILI SKAG+I +A L +V DG P Y +I + + A F +
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
KG PN YT LI + G +A M
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 41/247 (16%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V+ +L+ G LN L K++++ MI +G P FNSL+ CKS + + ++
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKL 400
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMI------------------------------- 96
+ K Y ILI ++ G +
Sbjct: 401 LKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSF 460
Query: 97 ----------DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
++A++++H ++ +G P S Y+ +I + ++AF F E+K G
Sbjct: 461 ARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGV 520
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P+ YT LI + G +A N+L EM G P + + K +A +
Sbjct: 521 VPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANE 580
Query: 207 IEQLEVS 213
+ +L ++
Sbjct: 581 LFELMIA 587
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 22/226 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ AG ++ A +++M++ G +P + T+ +LI K+ +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA-------------------FR 101
V E++ + G +V TY LI K+G I++A F+
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+ +N+ E P Y ++ G + + DA + + G PN VY LI
Sbjct: 635 IKNNVAE---KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + EA +M E G P + + D L + DL K+
Sbjct: 692 KAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKV 737
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+NP V L+ L L+ ++++KM++ P++ + +I+ + K +
Sbjct: 706 MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAK 765
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G +V TY +I KAG +D+ L + G P Y
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D+A+ E+K P + Y +I G F+ + L E+ + G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE--GYKREFILSLGLLEEVEKNG 883
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P + ++ D G+ ++A ++ + +S
Sbjct: 884 SAPTILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P ++ L NA +E+A + +M G PD+ T+ LI+ K+G
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V TY LI A KA + A L ++ G P Y
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599
Query: 121 IIKGAFRRGQFDDAFCFFSEI-------------KIKGH---PPNRPVYTTLITMCGRGG 164
+I G + G + A ++ + KIK + PN Y L+ +
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +A + L M G P + +D + DG K D A+++
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 76/188 (40%), Gaps = 5/188 (2%)
Query: 4 KGFNPPVRGR--DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+G + V G+ ++L++ G A + + ++ G P T+N+L++ ++ ++
Sbjct: 198 RGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKL 257
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ ++ + +LG D T A+ K G EA L+ ++ P LY +
Sbjct: 258 DTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKM 314
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G F++A F + ++ PN Y L+ C + L M G
Sbjct: 315 ISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGC 374
Query: 182 TPISRCFD 189
P F+
Sbjct: 375 YPSYTIFN 382
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 3/183 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D G+ P + LVQ L A L++A+ + +M + G D T + +CK G+
Sbjct: 232 LKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGK 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K + Y +I + +A +EA L+ + P Y
Sbjct: 292 WREALSL---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRI 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + Q S + +G P+ ++ +L+ + F A L +M +
Sbjct: 349 LLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408
Query: 181 LTP 183
P
Sbjct: 409 CKP 411
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 3/166 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G + Q L G A ++ K + P+ +N +I +C++
Sbjct: 267 MSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASF 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + +V TY+IL+ + R+L ++ +G P +++
Sbjct: 324 FEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNS 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
++ + F A+ +++ P VY LI GG
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGEL 429
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++L+ G ++ A + NKM + P++ T++SLI+ +CKSG + +
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ ++ G +V TY I++ A+ K ++D+A L + + E G P S Y +I G
Sbjct: 413 WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + D+A F E+ + P+ Y LI + GR A M + G
Sbjct: 473 YCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ N V ++L+ L G L A M N MI++G PDL TFN+L+ C +
Sbjct: 279 MVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYND 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + G DV +Y ILI K IDEA L + + P Y+
Sbjct: 339 VVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSS 398
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A+ FS I G PN Y ++ + +A M E G
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458
Query: 181 LTPISRCFDLVTDG 194
LTP ++++ +G
Sbjct: 459 LTPNVSSYNILING 472
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + +L+ + G++ A ++ ++K+G + T ++++ +C +GE
Sbjct: 104 MGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGE 163
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E + SV G D TY LI + K G+ EAF LLH + P +Y
Sbjct: 164 VRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNM 223
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
I+ G + G +A +S++ +G P+ YT LI CG G++ E L +M +
Sbjct: 224 IVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGL-GQWREVTRLLCDMVDR 282
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ ++++ D L G A + L +
Sbjct: 283 NVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +++V GL G + A+ + + ++ +G DPD+ T+ LI C G+
Sbjct: 209 MEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQ 268
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +V TY ILI A+ K GM+ +A + + ++E G P +
Sbjct: 269 WREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNT 328
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +A F G P+ Y LI + R EA + +M
Sbjct: 329 LMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK 388
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + DGL G+ A ++
Sbjct: 389 LAPNIVTYSSLIDGLCKSGRISYAWEL 415
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G +P V L+ G G +++ M+ + + ++ T+N LI+ +CK G +
Sbjct: 247 RGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGK 306
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+M + + G D+ T+ L+ + EA +L E G P Y +I
Sbjct: 307 AHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILII 366
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + D+A F+++ K PN Y++LI + GR A + + G +P
Sbjct: 367 GYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSP 426
Query: 184 ISRCFDLVTDGL 195
++++ D L
Sbjct: 427 NVITYNIMLDAL 438
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K P + L+ GL +G + A ++ + + G P++ T+N +++ +CK
Sbjct: 384 MNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQL 443
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ + + G +VS+Y ILI K+ IDEA L + P Y
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I G + G+ A+ F+ + G P + Y L
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G A ++++KM Q P++ +N +++ +CK G V ++Y V G
Sbjct: 189 LINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRG 248
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI G E RLL ++V+ N Y +I ++G A
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAH 308
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ + +G P+ + TL++ VEA E G+TP ++++ G
Sbjct: 309 DMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIG 367
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V ++L+ G + ++ A + +M ++ PD T+N LI+ +CKSG
Sbjct: 454 MFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGR 513
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSK 92
+ E++ + G DV TY IL A SK
Sbjct: 514 ISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 68/170 (40%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A + ++I P + FN ++ +I K + + + G + T I
Sbjct: 59 IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI G + AF +L +++ G+ I+KG G+ A F + +G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ Y TLI + G EA L +M + P ++++ DGL
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL 228
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 195 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGR 254
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + +G P Y
Sbjct: 255 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTT 314
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + VYT LI+ + GR V+A L EM +G
Sbjct: 315 LIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 374
Query: 181 LTP 183
L P
Sbjct: 375 LKP 377
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 160 ITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 219
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 220 MDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 279
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G+ A E+ ++G P++ YTTLI C + G A + M +
Sbjct: 280 LIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQEN 339
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 340 IRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLK 376
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+Q G + A+ ++N + K G P + +FN+LI + G+++
Sbjct: 129 GYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEG 188
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L +++ G P + +I G
Sbjct: 189 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDG 248
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 249 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPD 308
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + D+ E
Sbjct: 309 KITYTTLIDGC--CKEGDMETAFEH 331
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P+ +++ L+ Y + ++++ G L FN L++ CK G++
Sbjct: 95 FWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCKEGDIRVAQ 154
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ ++ K G V ++ LI + G +DE FRL + G P Y+ +I G
Sbjct: 155 LVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGL 214
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ KG PN +TTLI + GR A +M L+P
Sbjct: 215 CKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 274
Query: 186 RCFDLVTDGLKNCGK----HDLAEKI 207
++ + GL G+ HDL +++
Sbjct: 275 ITYNTLIYGLCKKGELKQAHDLIDEM 300
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK GE
Sbjct: 230 MLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGE 289
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ +Y
Sbjct: 290 LKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTA 349
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+I G + G+ DA E+ G PN
Sbjct: 350 LISGLCQEGRSVDAEKMLREMLSVGLKPN 378
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + L+T ++E + K + Y + + G
Sbjct: 70 LITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECG 129
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A +L+ + + G P + +I G R G D+ F
Sbjct: 130 YPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGF 189
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM + G+ P F + DG
Sbjct: 190 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGH 249
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 250 CKNGRVDLAMEI 261
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L AG +E A + +++K G P+ +N+LI C+SG+V+ E++ + +
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY IL+ S+ G A LL +V +GH P + Y +I+ GQ +DA+
Sbjct: 541 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAY 600
Query: 136 CFFSEIKIKGHPPNRPVYTTL 156
F E+ KG P+ Y+ L
Sbjct: 601 TLFKEMIAKGFNPDMQTYSAL 621
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P V + L+ GL + A + ++M PDL TF +LI+T+ K+G
Sbjct: 431 MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGR 490
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E + K+G + Y LI ++G +D+ + L +++E P Y
Sbjct: 491 MEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTI 550
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G RRG A E+ +GH P Y LI G+ +A EM G
Sbjct: 551 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 610
Query: 181 LTP 183
P
Sbjct: 611 FNP 613
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ ++QG + G L A Q+ + + S PD+ T+N LI +CKS ++E + ++ +
Sbjct: 270 NFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQ 328
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY L+ A KAG +A + +N+ + G P +Y +I ++G+ D+
Sbjct: 329 GGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDE 388
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ KG P+ Y +I + GR+ +A ++ M +P ++ + +
Sbjct: 389 ALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLN 448
Query: 194 GLKNCGKHDLA 204
GLK + D A
Sbjct: 449 GLKKLRRTDEA 459
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P R ++++ L + G E A M ++ PD+ T+N+L+ + K
Sbjct: 396 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 455
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + D++T+ LI ++KAG +++A LV+ GH P +Y
Sbjct: 456 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNA 515
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R GQ D + F ++ P+ YT L+ R G A L EM G
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP ++++ L G+
Sbjct: 576 HTPALATYNVLIRSLSMAGQ 595
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +LL+ L + LE A + + + G D+ T++ L++ K+G +E+
Sbjct: 299 PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEV 357
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+Y++ K G D Y +LI + K G +DEA LL ++ G P Y +I
Sbjct: 358 FYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSS 417
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+++ A+ FF +K + H P+ Y TL+ + R EA + EM P
Sbjct: 418 CGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTT 477
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
F + D L G+ + + LE S R V
Sbjct: 478 FGTLIDTLAKAGRME-----DALEQSARLV 502
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ AG A ++ M K G PD +N LI + K G+V+ +E+ + + G
Sbjct: 341 LMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 400
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY I+I +S G ++A+ + H+P Y ++ G + + D+A
Sbjct: 401 IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEAC 460
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E++ P+ + TLI + GR +A + +MG P S ++ + G
Sbjct: 461 DLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGF 520
Query: 196 KNCGKHD 202
G+ D
Sbjct: 521 CRSGQVD 527
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ L G ++ A +++ M ++G PD T+N +I+ + G
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + DV TY L+ + K DEA L + + P + +
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +DA + + GH PN +Y LI+ R G+ + +M E
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P S + ++ G G +A ++ Q
Sbjct: 541 CFPDSITYTILVLGFSRRGHTSMAMELLQ 569
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVE 66
P V + L+ G AG + A M ++ ++GS P+ +F++L+ +CK +
Sbjct: 123 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 182
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + G ADV+ LI + GM+ +A RLLH++ Y ++
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHC 242
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN 171
R GQ + F + G + Y +I R GR EA
Sbjct: 243 RAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQ 287
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV G G+ A +++ +M+++G P L T+N LI ++ +G+VE ++ +
Sbjct: 550 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAK 609
Query: 75 GSCADVSTYKIL 86
G D+ TY L
Sbjct: 610 GFNPDMQTYSAL 621
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P + L+ G G A + +M++ G P + T+ +LI ++CK+
Sbjct: 106 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + + G + TY LI S+ G+++EA+R+L+ + E G +P Y
Sbjct: 166 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + ++A E+ KG P+ Y+T+I+ R G A EM E G
Sbjct: 226 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 285
Query: 181 LTPISRCFDLVTDGL 195
++P + + + GL
Sbjct: 286 VSPDAVTYSSLIQGL 300
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G ++ A ++ M +G P+L ++N +I +C+ G
Sbjct: 36 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D TY L+ K G +A + +V +G +P Y
Sbjct: 96 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + A FF +++I+G PN YTTLI R G EA L EMTE G
Sbjct: 156 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 215
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+P ++ G H + E++E+
Sbjct: 216 FSPSVVTYNAFIHG------HCVLERMEE 238
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P R L+ G G L A +++N+M + G P + T+N+ I C
Sbjct: 176 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G DV +Y +I + G +D AF++ +VE G +P Y+
Sbjct: 236 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + +A E+ G PP+ YTTLI G +A + EM G
Sbjct: 296 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 355
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + ++ +GL + A+++
Sbjct: 356 FLPDAVTYSVLINGLNKQARTREAKRL 382
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V ++L++G + G L+ +M + G P++ T+N+LI+ CK G ++
Sbjct: 7 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 66
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ S+ G ++ +Y ++I + + G + EA+ +L + G P Y ++ G
Sbjct: 67 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G F A +E+ G P+ YT LI + A + +M GL P R
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 187 CFDLVTDGLKNCGKHDLAEKI 207
+ + DG G + A +I
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRI 207
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 71/148 (47%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
MI+ P++ T+N LI C GE++ + + + + G +V TY LI A K G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
IDEAF LL ++ G P Y II G R G +A+ E+ KG P+ Y T
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTP 183
L+ + G F +A EM G++P
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSP 148
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 83/199 (41%), Gaps = 17/199 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P L+QGL L A + +M+ G PD T+ +LI C G+
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
+ + ++ + G D TY +LI ++K EA RLL L+ + P
Sbjct: 341 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 400
Query: 114 ---------FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
F S+ A +IKG +G +A F + + H P VY +I RGG
Sbjct: 401 LIENCSNIEFKSVVA-LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGG 459
Query: 165 RFVEAANYLMEMTEMGLTP 183
+A N EM G P
Sbjct: 460 NLPKAFNLYKEMIHSGFVP 478
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ GF+P V + + G +E A +V +M+++G PD+ +++++I C+ GE
Sbjct: 211 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M + + G D TY LI + + + EA L +++ G P Y
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + A E+ KG P+ Y+ LI + R EA L ++
Sbjct: 331 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 390
Query: 181 LTPISRCFDLVTDGLKN 197
P +D + + N
Sbjct: 391 SVPSDVTYDTLIENCSN 407
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P L+ GL G + A ++V++M++ G PDL T N+L+ +C SG+
Sbjct: 251 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 310
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G + TY ++ + K+G A LL + E Y+ II G
Sbjct: 311 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 370
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G D+AF F+E+++KG N Y LI GR+ + A L +M + + P
Sbjct: 371 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 430
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
F ++ D GK AE++ +
Sbjct: 431 VVTFSVLIDSFVKEGKLREAEELHK 455
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + ++L+ G NAG + +++ MIK+ +P++ TF+ LI++ K G+
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G D TY LI K +D+A +++ +V G +P +
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DD F ++ ++G + Y TLI G+ A EM
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA----EKIEQLEVSL 214
+ P + ++ DGL + G+ + A EKIE+ ++ L
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 604
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + LV GL +G A +++KM++ G P+ T+ ++ +CKSG+
Sbjct: 282 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + + D Y I+I + K G +D AF L + + G Y
Sbjct: 342 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G++DD ++ + PN ++ LI + G+ EA EM G
Sbjct: 402 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 461
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ P + + + DG D A ++ L VS
Sbjct: 462 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 494
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+QG G L AK++ +M+ + P++ T+ L++ +C +GE
Sbjct: 527 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 586
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E++ + K D+ Y I+I + A +D+A+ L +L G P Y
Sbjct: 587 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F +++ GH P+ Y LI G ++ + E+ G
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 706
Query: 181 LTPISRCFDLVTDGLKN 197
+ + +V D L +
Sbjct: 707 FSVDASTIKMVIDMLSD 723
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G +L+ A QMV+ M+ +G DP++ TFN LI CK+
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + G AD TY LI + G ++ A L +V P Y
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 576
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F +I+ + +Y +I + +A + + G
Sbjct: 577 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 636
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + ++++ GL C K L+E
Sbjct: 637 VKPGVKTYNIMIGGL--CKKGPLSE 659
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P +R ++L+ G A ++ ++ KM +G D T+N+LI+ C+ G+
Sbjct: 492 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 551
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + ++ TYKIL+ + G ++A + + + +Y
Sbjct: 552 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA+ F + +KG P Y +I + G EA +M E G
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 671
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P ++++ + G D + ++ +E
Sbjct: 672 HAPDGWTYNILIRA--HLGDGDATKSVKLIE 700
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL G L++A + N+M +G ++ T+N LI C +G + ++ + K
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V T+ +LI + K G + EA L ++ G P Y +I G + D A
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ KG PN + LI + R + +M+ G+ + ++ + G
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545
Query: 195 LKNCGKHDLAEKIEQLEVS 213
GK ++A+++ Q VS
Sbjct: 546 FCELGKLNVAKELFQEMVS 564
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G A +++ KM ++ D ++ +I+ +CK G ++ ++ + G ++ T
Sbjct: 339 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 398
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y ILI AG D+ +LL ++++ NP ++ +I + G+ +A E+
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 458
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ YT+LI + +A + M G P R F+++ +G C +
Sbjct: 459 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY--CKANR 516
Query: 203 LAEKIEQL-EVSLRSV 217
+ + +E ++SLR V
Sbjct: 517 IDDGLELFRKMSLRGV 532
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +M +G +L T + +I C+ ++ + KLG + T+ LI +
Sbjct: 208 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 267
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G + EA L+ +VE GH P ++ G G+ +A ++ G PN
Sbjct: 268 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 327
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
Y ++ + + G+ A L +M E + + + ++ DGL G D A
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 380
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 5/209 (2%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L GL++ + A + MI P + F+ L I K+ + + + + +
Sbjct: 155 RERLRSGLVDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME 213
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G ++ T I+I + + AF + +++ G+ P ++ +I G G+
Sbjct: 214 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 273
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A + GH P+ TL+ G+ EA + +M E G P + + V
Sbjct: 274 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 333
Query: 193 DGLKNCGKHDLA----EKIEQLEVSLRSV 217
+ + G+ LA K+E+ + L +V
Sbjct: 334 NVMCKSGQTALAMELLRKMEERNIKLDAV 362
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P + L+ G G A + +M++ G P + T+ +LI ++CK+
Sbjct: 310 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 369
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E + + G + TY LI S+ G+++EA+R+L+ + E G +P Y
Sbjct: 370 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + ++A E+ KG P+ Y+T+I+ R G A EM E G
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489
Query: 181 LTPISRCFDLVTDGL 195
++P + + + GL
Sbjct: 490 VSPDAVTYSSLIQGL 504
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G ++ A ++ M +G P+L ++N +I +C+ G
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D TY L+ K G +A + +V +G +P Y
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + A FF +++I+G PN YTTLI R G EA L EMTE G
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+P ++ G H + E++E+
Sbjct: 420 FSPSVVTYNAFIHG------HCVLERMEE 442
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNA-GYLE-SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
GF P V + ++ ++ + G ++ SA+++ +MI+ P++ T+N LI C GE++
Sbjct: 172 GFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQ 231
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + + G +V TY LI A K G IDEAF LL ++ G P Y II
Sbjct: 232 KGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R G +A+ E+ KG P+ Y TL+ + G F +A EM G++
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIE 208
P + + + + C +L +E
Sbjct: 352 PSVVTYTALINSM--CKARNLNRAME 375
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P R L+ G G L A +++N+M + G P + T+N+ I C
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 439
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G DV +Y +I + G +D AF++ +VE G +P Y+
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + +A E+ G PP+ YTTLI G +A + EM G
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + ++ +GL + A+++
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRL 586
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V ++L++G + G L+ +M + G P++ T+N+LI+ CK G ++
Sbjct: 211 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 270
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ S+ G ++ +Y ++I + + G + EA+ +L + G P Y ++ G
Sbjct: 271 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 330
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G F A +E+ G P+ YT LI + A + +M GL P R
Sbjct: 331 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 390
Query: 187 CFDLVTDGLKNCGKHDLAEKI 207
+ + DG G + A +I
Sbjct: 391 TYTTLIDGFSRQGLLNEAYRI 411
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 83/199 (41%), Gaps = 17/199 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P L+QGL L A + +M+ G PD T+ +LI C G+
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
+ + ++ + G D TY +LI ++K EA RLL L+ + P
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 604
Query: 114 ---------FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
F S+ A +IKG +G +A F + + H P VY +I RGG
Sbjct: 605 LIENCSNIEFKSVVA-LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGG 663
Query: 165 RFVEAANYLMEMTEMGLTP 183
+A N EM G P
Sbjct: 664 NLPKAFNLYKEMIHSGFVP 682
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ GF+P V + + G +E A +V +M+++G PD+ +++++I C+ GE
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M + + G D TY LI + + + EA L +++ G P Y
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + A E+ KG P+ Y+ LI + R EA L ++
Sbjct: 535 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594
Query: 181 LTPISRCFDLVTDGLKN 197
P +D + + N
Sbjct: 595 SVPSDVTYDTLIENCSN 611
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-GEVEFCVE-MYYSV 71
DL+V+ + ++ A +N G P + ++NS+++ I +S G V+ E +Y +
Sbjct: 146 DLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREM 205
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
+ +V TY ILI G + + + +G P Y +I + G+
Sbjct: 206 IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 265
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
D+AF + KG PN Y +I R G EA L EM G TP ++ +
Sbjct: 266 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 325
Query: 192 TDG 194
+G
Sbjct: 326 LNG 328
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P +L+ GL AK+++ K+I + S P T+++LIE C + E
Sbjct: 555 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN-CSNIE 613
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + C G++ EA R+ ++VE H P ++Y
Sbjct: 614 FKSVVALIKGFCM-------------------KGLMHEADRVFESMVERNHKPGEAVYNV 654
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
II G R G AF + E+ G P+ TLI + G
Sbjct: 655 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 698
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + +L+ GL AG LE + + + +G D+ F+S+++ + G+
Sbjct: 301 MIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGD 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+Y + K G +V TY ILI + + G + EA + +++ G P Y+
Sbjct: 361 LGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSS 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D F + + KGH P+ V + LI R G EA + + + G
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRG 480
Query: 181 LTPISRCFDLVTDG 194
LT + F+ + DG
Sbjct: 481 LTLNNYLFNALIDG 494
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +L+ GL G + A + +++KQG +P + T++SLI+ CKS
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSEN 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + + G DV +LI +S+ GM+DEA R V+ G L+
Sbjct: 431 LRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNA 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G FR + D + + + P+ YT L+ GR EA ++ + G
Sbjct: 491 LIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKG 550
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+P + + DG C K D A ++
Sbjct: 551 FSPDHIIYCTLIDGF--CKKRDPATGLQ 576
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ ++G P + + +++GL + A + M++ G P+L TF++LI CK
Sbjct: 231 LVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELR 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y + + G D+ Y ILI + +AG ++E L + G +++
Sbjct: 291 LDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSS 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ R G A ++ + +G PN Y+ LI R GR +EA ++ + G
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
L P + + DG C +L + + LR
Sbjct: 411 LEPSVLTYSSLIDGF--CKSENLRDGFGLYGIMLR 443
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ GL G ++ A + + +K+G + FN+LI+ +
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKR 500
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++MY + DV TY +L+ +++ G +DEA L L++ G +P +Y
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ F ++ G P+ +Y LI M R G L E+ + G
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG 620
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P D+VT CG
Sbjct: 621 LEP-----DIVTYNTMICG 634
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ + G L A ++ +M+K+G P++ T++ LI +C++G V ++ + K G
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY LI K+ + + F L ++ GH P + + +I G R+G D+A
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FF + +G N ++ LI C R R + + M + P + ++ GL
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 531 AEQGRLDEA 539
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +LV+GL G L+ A + +++K+G PD + +LI+ CK + +++
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ Y +LI + G ++ LL +++ G P Y +I G
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
F A F +K PN +T LI + GR +A M E G P
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697
Query: 188 FDLVTDG 194
+ + DG
Sbjct: 698 YSCLIDG 704
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 86/187 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ + L G +E ++++G P + N +++ +C ++ + + + +
Sbjct: 209 EFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVR 268
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ T+ LI K +DEAF L + ++E G P +Y+ +I G FR G+ ++
Sbjct: 269 SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
FS +G + ++++++ R G +A M + G++P + ++ +
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILIN 388
Query: 194 GLKNCGK 200
GL G+
Sbjct: 389 GLCRNGR 395
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ G +E+ +++ ++IK G +PD+ T+N++I C
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ + V K G + T+ ILI A K G +D+A + +++E G P Y+
Sbjct: 641 FSKAIKL-FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYS 699
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+I G F+ + AF + ++ PN Y+ LI +C +G
Sbjct: 700 CLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKG 744
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + L+ G ESA ++ KM+ P++ +++ LI+ +CK G
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + DV Y ILI K G + EA L +++ +G P L
Sbjct: 746 MEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKA 805
Query: 121 IIKGAFRRGQ 130
+ + F+ Q
Sbjct: 806 LAEYGFQDSQ 815
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P D L+ G A L+ A+++ +KM++ G +P++ T++SLI+ + K ++
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLV 734
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + ++ Y +I +SK DEA++L+ + E G P Y +I G
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ G+ D F E+ KG PN YT LI C G EA L EM +
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ L A + A ++ MI +G P++ T+ +LI+ CKSG
Sbjct: 550 MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGN 609
Query: 61 VEFC---------------VEMYYSV-CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+E V+MY+ + + +V TY L+ + KA + +A LL
Sbjct: 610 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 669
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ DG P +Y +I G + + D+A F ++ G+ PN Y++LI +
Sbjct: 670 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDK 729
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R L +M E P + + DGL K D A K+
Sbjct: 730 RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV GL A ++ A+ ++ M G +P+ +++LI+ CK+ +++ E+
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ + + G +V TY LI + K +D ++L ++E+ P +Y +I G +
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ D+A+ ++ KG PN YT +I G+ G+ + EM G P
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLE-------------- 46
M KG P V L+ G +G +E A Q+ +M PD++
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPN 644
Query: 47 --TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
T+ +L++ +CK+ +V+ ++ ++ G + Y LI KA +DEA + H
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+VE G+NP Y+ +I F+ + D S++ PN +YT +I +
Sbjct: 705 KMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVA 764
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+ EA ++ M E G P + + DG GK D
Sbjct: 765 KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVD 802
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G E A +++++M+ G PD T++ +I +C + VE ++ + G DV TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
ILI SKAG+I +A L +V DG P Y +I + + A F +
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
KG PN YT LI + G +A M
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 41/247 (16%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V+ +L+ G LN L K++++ MI +G P FNSL+ CKS + + ++
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKL 400
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMI------------------------------- 96
+ K Y ILI ++ G +
Sbjct: 401 LKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSF 460
Query: 97 ----------DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
++A++++H ++ +G P S Y+ +I + ++AF F E+K G
Sbjct: 461 ARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGV 520
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P+ YT LI + G +A N+L EM G P + + K +A +
Sbjct: 521 VPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANE 580
Query: 207 IEQLEVS 213
+ +L ++
Sbjct: 581 LFELMIA 587
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+NP V L+ L L+ ++++KM++ P++ + +I+ + K +
Sbjct: 706 MVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAK 765
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G +V TY +I KAG +D+ L + G P Y
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D+A+ E+K P + Y +I G F+ + L E+ + G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE--GYKREFILSLGLLEEVEKNG 883
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
PI + ++ D G+ ++A ++ + +S
Sbjct: 884 SAPIILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 22/226 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ AG ++ A +++M++ G +P + T+ +LI K+ +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA-------------------FR 101
V E++ + G +V TY LI K+G I++A F+
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+ +N+ E P Y ++ G + + DA + + G PN VY LI
Sbjct: 635 IKNNVAE---KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + EA +M E G P + + D L + DL K+
Sbjct: 692 KAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKV 737
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P ++ L NA +E+A + +M G PD+ T+ LI+ K+G
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V TY LI A KA + A L ++ G P Y
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599
Query: 121 IIKGAFRRGQFDDAFCFFSEI-------------KIKGH---PPNRPVYTTLITMCGRGG 164
+I G + G + A ++ + KIK + PN Y L+ +
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +A + L M G P + +D + DG K D A+++
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 76/188 (40%), Gaps = 5/188 (2%)
Query: 4 KGFNPPVRGR--DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+G + V G+ ++L++ G A + + ++ G P T+N+L++ ++ ++
Sbjct: 198 RGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKL 257
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ ++ + +LG D T A+ K G EA L+ ++ P LY +
Sbjct: 258 DTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKM 314
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G F++A F + ++ PN Y L+ C + L M G
Sbjct: 315 ISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGC 374
Query: 182 TPISRCFD 189
P F+
Sbjct: 375 YPSYTIFN 382
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 3/183 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D G+ P + LVQ L A L++A+ + +M + G D T + +CK G+
Sbjct: 232 LKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGK 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K + Y +I + +A +EA L+ + P Y
Sbjct: 292 WREALSL---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRI 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + Q S + +G P+ ++ +L+ + F A L +M +
Sbjct: 349 LLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408
Query: 181 LTP 183
P
Sbjct: 409 CKP 411
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 3/166 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G + Q L G A ++ K + P+ +N +I +C++
Sbjct: 267 MSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASF 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + +V TY+IL+ + R+L ++ +G P +++
Sbjct: 324 FEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNS 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
++ + F A+ +++ P VY LI GG
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGEL 429
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + L G A Q+ MI +G D T+N ++ +CKSG
Sbjct: 468 MLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGN 527
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI A + G + EA + ++ G P Y
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTV 587
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I RRG A+ +F ++ +G PN Y LI R GR A + EM E G
Sbjct: 588 FIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERG 647
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L+P + L+ DG NC + + E I
Sbjct: 648 LSPNKYTYTLLIDG--NCKEGNWEEAIR 673
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + ++ G+ +G +E+A+ +M G PDL T+NSLI CK+G
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G V TY IL+ + G ++EA R +VE G P S Y
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ + FF E+ KG P+ Y T I+ G EA M G
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507
Query: 181 LTPISRCFDLVTDGLKNCG 199
++ + +++ DGL G
Sbjct: 508 ISSDTVTYNIFLDGLCKSG 526
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L+ G L ++ ++M+ +G PD +N+ I G
Sbjct: 433 MVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGS 492
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G +D TY I + + K+G + +A+ L +V DG P Y
Sbjct: 493 TSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTC 552
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RG+ +A F + + G PP+ YT I R G A + +M E G
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++++ L G+ +LA
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLA 636
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + ++ + GL +G L+ A + KM+ G PD T+ LI C+ G
Sbjct: 503 MISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGR 562
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G TY + I A + G + A+ ++E+G P Y
Sbjct: 563 LREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNV 622
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ + A+ F E+ +G PN+ YT LI + G + EA EM + G
Sbjct: 623 LIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682
Query: 181 LTP 183
+ P
Sbjct: 683 IHP 685
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
FNP L+ G G +E A + +M +G P + T+N++I + +SG VE
Sbjct: 305 FNP-------LITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAAR 357
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + +G D+ TY LI KAG + EA L +L G P Y ++ G
Sbjct: 358 MKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGY 417
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
R G ++A F E+ +G P+ YT L+ + + EM GL P
Sbjct: 418 CRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQP 475
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ--GSDPDLETFNSLIETICKS 58
M G P + + L+ G ++ A +++ +M + G P T+N +I + +
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GE+E ++ + ++ A T+ LI G +++A L + +G P Y
Sbjct: 282 GELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTY 340
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
II G FR G + A F E++ G P+ Y +LI + G EA ++
Sbjct: 341 NTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKR 400
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
GL P ++++ DG G + A + +Q
Sbjct: 401 AGLAPSVLTYNILLDGYCRLGDLEEARRFKQ 431
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G L A+ + + M+ G P T+ I C+ G
Sbjct: 538 MVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGN 597
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + TY +LI A+ + G + A++ H ++E G +P Y
Sbjct: 598 LYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTL 657
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I G + G +++A +SE+ G P+ + L
Sbjct: 658 LIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNAL 693
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + G L SA KM+++G P+ T+N LI +C+ G
Sbjct: 577 GLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLA 636
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G + TY +LI K G +EA RL + + G +P + + KG
Sbjct: 637 YQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG 696
Query: 125 AFRRGQFDDAFCFFSEI 141
F GQ A + +
Sbjct: 697 -FDEGQSKHAIQYMENV 712
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 3/173 (1%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M G P ++ N ++ + + +Y + +LG + TY L+ + + G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245
Query: 95 MIDEAFRLLHNLVEDGHNPFPS--LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
+D+A +LL + PS Y +I G R+G+ + A +++ +
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMS-KKASAFT 304
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
+ LIT G +A +EM G+ P ++ + G+ G + A
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAAR 357
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P R +L++ + G + A +M+++M + P++ T+ LI+ +C+ G+
Sbjct: 291 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + K G C + T+ LI K G + AF+LL + + P Y
Sbjct: 351 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 410
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R + AF + G P+R Y L+ + G+ A N M G
Sbjct: 411 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 470
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F + DGL G+ + A I
Sbjct: 471 LEPDGFTFTALIDGLCKLGRLEQANGI 497
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K P V +L+ L G +E A + KM+K G P + TFN+LI CK G
Sbjct: 326 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 385
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V ++ SV + G+C ++ TY L+ + + +AF LL +V++G P Y
Sbjct: 386 VVSAFQL-LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 444
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + GQ + AF F+ + G P+ +T LI + GR +A L M +
Sbjct: 445 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 504
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G++ F + DG GK
Sbjct: 505 GISLDEVTFTALIDGHCKIGK 525
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 23/223 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L++G AG + +M+ +M + G P++ T+ +I +C +G
Sbjct: 571 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 630
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + +S+ G + TY +L+ A KAG +D AF+++ +V++G P +Y+
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 690
Query: 121 IIKGAF------------RRGQFD---------DAFCFFSEIKIKGHPPNRPVYTTLITM 159
++ G G D D C +EIK K P +Y L+
Sbjct: 691 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIK-KCGVPTEDLYNFLVVG 749
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+ GR +EA +M + GL P ++ K C K+D
Sbjct: 750 LCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTC-KYD 791
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V L G++++A+ K+++ G D SL+ C+ ++ ++ + K
Sbjct: 200 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 259
Query: 76 SCADVS-TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+C S TY ILI + +AG ++EAF+L +VE G P Y +IK G D A
Sbjct: 260 NCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 319
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ K PN YT LI R G+ EA +M + GL P F+ + +G
Sbjct: 320 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 379
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL AG LE A Q+ +M+++G P T+ LI+ C G + ++M +
Sbjct: 270 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 329
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V TY ILI + + G I+EA + +++ G P + +I G + G A
Sbjct: 330 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 389
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F S ++ PN Y L+ R + +A L + + GL P ++++ DG
Sbjct: 390 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449
Query: 195 LKNCGKHDLAEKI 207
G+ ++A I
Sbjct: 450 FCKEGQLNMAFNI 462
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A M+ KM+K G P + T LIE C++GE ++M + + G +V TY I
Sbjct: 561 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 620
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + G ++EA +L ++ G +P YA ++K + G+ D AF S + G
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680
Query: 146 HPPNRPVYTTLIT 158
PN +Y+ L++
Sbjct: 681 CQPNSHIYSALLS 693
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P L+ GL G LE A ++ M+K+G D TF +LI+ CK G+
Sbjct: 466 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 525
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ + T+ + A+ K ++EA +L +++ G P +
Sbjct: 526 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTI 585
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R G+ + +K G PN YT +I GR EA L M+ G
Sbjct: 586 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 645
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++P + ++ G+ D A +I
Sbjct: 646 VSPNHFTYAVLVKAHVKAGRLDRAFQI 672
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ G G++ SA Q+++ M K P++ T+N L+E +C+ +
Sbjct: 361 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V G D TY IL+ K G ++ AF + +++ G P +
Sbjct: 421 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A + KG + +T LI + G+ + M E
Sbjct: 481 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540
Query: 181 LTPISRCFDLVTDGL 195
+ F+ D L
Sbjct: 541 CLTTAHTFNCFLDAL 555
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Query: 26 LESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYK 84
L A ++ KM K+ P+ T++ LI +C++G +E ++ + + G TY
Sbjct: 245 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 304
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+LI A GM D+A ++L + P Y +I R G+ ++A F ++
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
G P + LI + G V A L M + P R ++ + +GL
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 415
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 5/210 (2%)
Query: 1 MSDKGF--NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M++ GF + P L+ LN G++ A + +M+ +G + +++ +CK+
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFV--AFLVYRRMVNEGFVLGGIDYRTVVNALCKN 207
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFPSL 117
G V+ V +LG D L+ A + + EAFR+ + E+ P
Sbjct: 208 GFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVT 267
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y+ +I G G+ ++AF E+ KG P+ YT LI G +A L EM
Sbjct: 268 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 327
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ D L GK + A +
Sbjct: 328 TKACVPNVHTYTILIDRLCREGKIEEANGV 357
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV GL G + A Q+ M+K G PD + +S+IE CK+ + + C+E V
Sbjct: 744 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLD 802
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
++Y +I + G + EA +L+ +LV
Sbjct: 803 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 836
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL ++ A Q++++MI++ PD +N LI +CK G+++ + + +
Sbjct: 97 ILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER 156
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
DV TY LI + +DEA +L+ + E G P Y ++ G ++ Q ++
Sbjct: 157 SCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEV 216
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ G P+ Y T++ G++ EA L +M E P ++ + DG
Sbjct: 217 SKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDG 276
Query: 195 LKNCGKHDLAEKI 207
K D AE++
Sbjct: 277 FCKVSKMDEAERL 289
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + + L+ GL AG LE A +++ M+++ PD+ T++ L+ +CK G+
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G ++ T+ +I KAG +DE ++L + E P Y+
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DAF I G P++ Y++++ G+ EA + MT+ G
Sbjct: 448 LIDGYCKANRMQDAF------AILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQG 501
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P S + L+ GL + + D A K+ Q+
Sbjct: 502 CPPTSSHYALIIGGLCDVERGDEALKMLQV 531
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ GL LE +++ +M++ G +PD ++N+++ +C+SG+
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + + DV TY L+ K +DEA RLL ++V P Y
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + DA+ ++ G P+ Y L+ + G+ EA L M E
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ +GL GK D A
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDA 391
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G A L A +++ M K G PDL T+N L++ +CK+G++E E+
Sbjct: 300 PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + DV TY IL+ + K G +D+A LL ++E G P + +I G +
Sbjct: 360 LEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCK 419
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+ +K P+ Y+TLI + R +A L G++P
Sbjct: 420 AGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKAS 473
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
+ + +GL + GK + A+++ L
Sbjct: 474 YSSMLEGLCSTGKVEEAQEVMDL 496
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG + ++ N+M+ + PD+ T N++++ C+ G+++ + + K+
Sbjct: 30 LITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRG--KMW 87
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
TY ILI + + IDEA++LL +++ +P ++Y +I G + G+ D A
Sbjct: 88 CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAAR 147
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + P+ YT+LI C + EA + +M E GLTP + ++ + +GL
Sbjct: 148 NVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGL 207
Query: 196 KNCGKHDLAEKIEQLE 211
C ++ L E + LE
Sbjct: 208 --CKQNQLEEVSKLLE 221
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P V L+ G L+ A++++ KM + G PD +N+L+ +CK +
Sbjct: 153 MLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQ 212
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G D +Y ++ + ++G +EA ++L ++E P Y
Sbjct: 213 LEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNS 272
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D+A ++ + P YTTLI R R +A + +M + G
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG 332
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
++P ++ + DGL GK L E E LEV
Sbjct: 333 ISPDLVTYNCLLDGLCKAGK--LEEAHELLEV 362
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + +V L +G E A +++ KMI++ PD+ T+NSL++ CK +
Sbjct: 223 MVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSK 282
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + V TY LI S+A + +A+R++ ++ + G +P Y
Sbjct: 283 MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNC 342
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ ++A + K P+ Y+ L+ + G+ +A L M E G
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG 402
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL--EVS 213
P F+ + DG GK D K+ +L EVS
Sbjct: 403 CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P +++GL + G +E A+++++ M KQG P + +I +C +
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEA 525
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++M + + G ++ TY ILI + K +++A +L ++E G P + Y +I G
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + D A+ F ++ G P++ Y LI+ + G +A + M E G P
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P L++ GL + + A +M+ M ++G +P+L T++ LI +CK+
Sbjct: 497 MTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKR 556
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + G DV+TY LI K +D A++ + + G P Y
Sbjct: 557 VEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNI 616
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G + G + A + KG P+ Y +L+
Sbjct: 617 LISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 67/123 (54%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++G P + +L+ GL +E A +++ M+++G PD+ T+ SLI+ CK +
Sbjct: 532 MSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINK 591
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ G D Y ILI ++G +++A ++ ++E G NP + Y
Sbjct: 592 MDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFS 651
Query: 121 IIK 123
+++
Sbjct: 652 LMR 654
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 6/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L+ G A ++ A ++ G PD +++S++E +C +G+
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGK 486
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + K G S Y ++I + DEA ++L + E G P Y+
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA + KG P+ YT+LI + + A M + G
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++++ G G + A ++ QL
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQL 636
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V L+ G +++A Q M G +PD +N LI C+SG
Sbjct: 567 MLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGN 626
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
VE +E+ + + G D +TY L+ +++
Sbjct: 627 VEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P ++ + + + AG E + M ++ + PD +++ LI + K+G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++YS+ + G D Y I+I K G +++A++LL + G P Y
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A+ F E K K N +Y++LI G+ GR EA L E+ + G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
LTP ++ + D L AE+I + V +S+
Sbjct: 688 LTPNLYTWNSLLDALVK------AEEINEALVCFQSM 718
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P V L++G G ++SA ++++M D D+ +N I++ K G+
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D TY +I + KA +DEA + +L ++ P Y
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+FD+A+ + KG P+ Y ++T + G+ EA EM +
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-D 372
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++++ D L GK D A
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTA 396
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P V ++ GL L+ A + + + + ++ ++SLI+ K G
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G ++ T+ L+ A+ KA I+EA ++ E P Y
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F+ AF F+ E++ +G P+ YTT+I+ + G EA G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 181 LTPISRCFDLVTDGLKN 197
P S C++ + +GL N
Sbjct: 793 GVPDSACYNAMIEGLSN 809
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ F P R +L+ GL+ AG+ ++ M +QG D +N +I+ CK G+V
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G V TY +I ++K +DEA+ L +Y+ +I
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ D+A+ E+ KG PN + +L+ + EA M E+ TP
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 184 ISRCFDLVTDGL 195
+ ++ +GL
Sbjct: 726 NQVTYGILINGL 737
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 43/239 (17%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV-EFCV- 65
P + ++L+ L AG L++A ++ + M K G P++ T N +++ +CKS ++ E C
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 66 --EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
EM Y VC D T+ LI + K G +D+A+++ +++ +Y +IK
Sbjct: 435 FEEMDYKVCT----PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 124 GAFRRGQFDDAF-----------------------------------CFFSEIKIKGHPP 148
F G+ +D F EIK + P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y+ LI + G E M E G +R +++V DG CGK + A ++
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +++++G P+L T+NSL++ + K+ E+ + + S+ +L
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + K ++AF + + G P Y +I G + G +A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F K G P+ Y +I G R ++A + E GL PI
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL-PI 830
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P V +V G + A L +V M K P + +LI
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + +LG V + LI +K G +D A LL + + LY
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ D A+ FF EI+ G P+ YT++I + + R EA + +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ + G + GK D A
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEA 327
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P L+ + + + +M + G +P + F +LI K G V+ +
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + AD+ Y + I + K G +D A++ H + +G P Y +I
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + D+A F ++ P Y T+I G G+F EA + L G P
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
++ + L+ GK D A K+
Sbjct: 344 IAYNCILTCLRKMGKVDEALKV 365
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ L G ++ A ++ +M K+ + P+L T+N LI+ +C++G+++
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ S+ K G +V T I++ + K+ +DEA + + P + +I
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DDA+ + ++ N VYT+LI GR + +M +P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 184 ISRCFDLVTDGLKNCGK 200
+ + D + G+
Sbjct: 516 DLQLLNTYMDCMFKAGE 532
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + L+ L+ A + A M + P+ T+ LI +CK +
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + K G +Y +I ++KAG I EA L +G P + Y +I+
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
G + DAF F E + +G P + L+ + +AA
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAA 852
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 2/186 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ Q++ +M G P + T ++ K+ ++ ++ + K S Y
Sbjct: 114 FDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTT 173
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI A S D L + E G+ P L+ +I+G + G+ D A E+K
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
+ +Y I G+ G+ A + E+ GL P + + L C + L E
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL--CKANRLDE 291
Query: 206 KIEQLE 211
+E E
Sbjct: 292 AVEMFE 297
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG L+ A +++++M +G P + N +I+ +CK+G + + +V
Sbjct: 36 LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN-PFPSLYAPIIKGAFRRGQFDDA 134
D+ T+ IL+ A+ K+G ++EAF++ ++ P Y +I G + G+ D A
Sbjct: 96 CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ G PN Y+ L+ + GR + L EMT G P ++ + +G
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 195 LKNCGKHDLAEKIEQLEVSLRS 216
L C L E +E +++ +RS
Sbjct: 216 L--CKSRRLDEALELVQLMIRS 235
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V + +++GL AG A + PD+ TFN L++ + KSG
Sbjct: 56 MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 61 VEFCVEMYYSVCKLGSC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE +++ S+ C +V TY +I + K G +D A LL + E G P Y+
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+++G + G+ D F E+ +G P+ +Y TL+ + R EA + M
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 180 GLTP 183
G P
Sbjct: 236 GCYP 239
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V +LV+GL AG + ++ +M ++G PD+ +N+L+ +CKS
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + + G V TY L+ ++ +D AFRL+ + E G P Y
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF-----VEAANYLME 175
+I G R + DDA ++ P+ Y+T+I + R +EAA ++E
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 176 -MTEMGLTPISRCFDLVTDGL 195
M + G P + + +V +GL
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGL 362
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKM-IKQGSDPDLETFNSLIETICKSGEVEFCV 65
P + ++LV L+ +G +E A Q+ M P++ T+ ++I +CK G+++ +
Sbjct: 97 TPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAI 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E+ + + G C +V TY +L+ + KAG D+ F LL + G P +Y ++ G
Sbjct: 157 ELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + D+A + G P Y +L+ + R + A + M+E G P
Sbjct: 217 CKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDV 276
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ V GL + D A+ + + V+ R V
Sbjct: 277 INYNTVIAGLCRDARLDDAQALLKQMVAARCV 308
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ GL G L+ A ++++ M + G P++ T++ L+E +CK+G + +
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTL 193
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV Y L+ + K+ +DEA L+ ++ G P Y +++ R
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
Q D AF + +G PP+ Y T+I R R +A L +M P
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313
Query: 188 FDLVTDGLKNCGKHDLAEKIE 208
+ + DGL + D K+E
Sbjct: 314 YSTIIDGLCKDWRVDADWKLE 334
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 9/217 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++G P V + ++ GL L+ A+ ++ +M+ PD+ T++++I+ +CK
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 61 V------EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
V E E+ + + G + TY ++I + +A +A LL +++ P
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
S ++ +I + D A+ F + + PN Y LI +GG V+ A +
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE-VDKAVRVF 445
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
E+ P ++ V DGL CG + E + +E
Sbjct: 446 ELMVESFRPGVATYNSVLDGL--CGVGRIEEAVRMVE 480
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
LE+A +++ M + G P+ T+ +IE +C++ + + + + + D+S++ +
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I ++ K+ +D A+++ + E P P YA +I G + G+ D A F E+ ++
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVES 451
Query: 146 HPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
P Y +++ +CG GR EA + M P + + GL
Sbjct: 452 FRPGVATYNSVLDGLCGV-GRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P + +++ L + L++A ++ M ++ P+ + +LI+ + K GE
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V ++ + + V+TY ++ + G I+EA R++ ++ P + Y
Sbjct: 438 VDKAVRVFELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGA 496
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R ++A+ F ++ KG VY L+ + R +A ++ E G
Sbjct: 497 LIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY LI + KAG +D+A+ LL + + G P +++ +IKG + G+F DA +F +
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM-TEMGLTPISRCFDLVTDGLKNCGK 200
P+ + L+ + GR EA M T P + V +GL GK
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151
Query: 201 HDLAEKIEQLEV 212
D A IE L++
Sbjct: 152 LDRA--IELLDL 161
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + + L+ G + A+ + M + G PD+ T++ L+ET K
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + GS D+++Y +L+ A +++G I EA + + G P + Y+
Sbjct: 61 LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G++DD F E+K+ PN Y LI + G GG F E +M E
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 180
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G H+ A+KI
Sbjct: 181 VEPNMETYEGLIFACGKGGLHEDAKKI 207
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P + LV+ LE +++ +M GS PD+ ++N L+E +SG
Sbjct: 36 MNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGS 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + +TY IL+ + G D+ L + P + Y
Sbjct: 96 IKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNI 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F + F ++ + PN Y LI CG+GG +A L+ M E G
Sbjct: 156 LINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKG 215
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S+ + V + ++ A
Sbjct: 216 VVPSSKAYTGVIEAYGQAALYEEA 239
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ G + + + +M ++P+ T+N LI + G
Sbjct: 106 MQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGY 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V +++ + + ++ TY+ LI A K G+ ++A ++L ++ E G P Y
Sbjct: 166 FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTG 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + +++A F+ + G P Y +LI M +GG + E+ L++M + G
Sbjct: 226 VIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSG 285
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ F+ V + + G+ + A K
Sbjct: 286 VARNRDTFNGVIEAFRQGGQFEEAIK 311
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L++ +G ++ A + +M G P+ T++ L+ + G
Sbjct: 71 MESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGR 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + + +TY ILI + G E L H++VE+ P Y
Sbjct: 131 YDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +DA + KG P+ YT +I G+ + EA M E+G
Sbjct: 191 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 250
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + G + +E I
Sbjct: 251 SKPTVETYNSLIQMFAKGGLYKESEAI 277
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++L+ GY + + + M+++ +P++ET+ LI K G E ++
Sbjct: 148 PNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKI 207
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G Y +I A +A + +EA + + E G P Y +I+ +
Sbjct: 208 LLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAK 267
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G + ++ ++ G NR + +I +GG+F EA +EM + P +
Sbjct: 268 GGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQT 327
Query: 188 FDLV 191
+ V
Sbjct: 328 LEAV 331
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 10 VRGRDL---LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
R RD +++ G E A + +M K DPD +T +++ C +G VE E
Sbjct: 287 ARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEE 346
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + LG V Y +++ +KA D+A +LL + N +++ I G
Sbjct: 347 QFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFT---NRVSNIHQVI--GQM 401
Query: 127 RRGQFDDAFCF------FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
RG +DD + F ++K +G Y TL+ G+ A L E T+ G
Sbjct: 402 IRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRG 461
Query: 181 LTP 183
L P
Sbjct: 462 LFP 464
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + + L+ G E AK+++ M ++G P + + +IE ++
Sbjct: 176 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAAL 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + ++ ++GS V TY LI +K G+ E+ +L + + G +
Sbjct: 236 YEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNG 295
Query: 121 IIKGAFRR-GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ AFR+ GQF++A + E++ P+ ++++ G E+ E+ +
Sbjct: 296 VIE-AFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKAL 354
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ P C+ ++ + D A ++
Sbjct: 355 GILPSVMCYCMMLAVYAKADRWDDAHQL 382
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + +L+ GL AG LE + + + +G D+ F+S+++ + G+
Sbjct: 301 MIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGD 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+Y + K G +V TY ILI + + G + EA + +++ G P Y+
Sbjct: 361 LGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSS 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D F + + KGH P+ V + LI R G EA + + + G
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRG 480
Query: 181 LTPISRCFDLVTDG 194
LT + F+ + DG
Sbjct: 481 LTLNNYLFNALIDG 494
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +L+ GL G + A + +++KQG +P + T++SLI+ CKS
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSEN 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + + G DV +LI +S+ GM+DEA R V+ G L+
Sbjct: 431 LRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNA 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G FR + D + + + P+ YT L+ GR EA ++ + G
Sbjct: 491 LIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKG 550
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+P + + DG C K D A ++
Sbjct: 551 FSPDHIIYCTLIDGF--CKKRDPATGLQ 576
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ ++G P + + +++GL + A + M++ G P+L TF++LI CK
Sbjct: 231 LVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELR 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y + + G D+ Y ILI + +AG ++E L + G +++
Sbjct: 291 LDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSS 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ R G A ++ + +G PN Y+ LI R GR +EA ++ + G
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
L P + + DG C +L + + LR
Sbjct: 411 LEPSVLTYSSLIDGF--CKSENLRDGFGLYGIMLR 443
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ GL G ++ A + + +K+G + FN+LI+ +
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKR 500
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++MY + DV TY +L+ +++ G +DEA L L++ G +P +Y
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ F ++ G P+ +Y LI M R G L E+ + G
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG 620
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P D+VT CG
Sbjct: 621 LEP-----DIVTYNTMICG 634
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ + G L A ++ +M+K+G P++ T++ LI +C++G V ++ + K G
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY LI K+ + + F L ++ GH P + + +I G R+G D+A
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FF + +G N ++ LI C R R + + M + P + ++ GL
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 531 AEQGRLDEA 539
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +LV+GL G L+ A + +++K+G PD + +LI+ CK + +++
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ Y +LI + G ++ LL +++ G P Y +I G
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
F A F +K PN +T LI + GR +A M E G P
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697
Query: 188 FDLVTDG 194
+ + DG
Sbjct: 698 YSCLIDG 704
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 86/187 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ + L G +E ++++G P + N +++ +C ++ + + + +
Sbjct: 209 EFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVR 268
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ T+ LI K +DEAF L + ++E G P +Y+ +I G FR G+ ++
Sbjct: 269 SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
FS +G + ++++++ R G +A M + G++P + ++ +
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILIN 388
Query: 194 GLKNCGK 200
GL G+
Sbjct: 389 GLCRNGR 395
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ G +E+ +++ ++IK G +PD+ T+N++I C
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+++ + V K G + T+ ILI A K G +D+A + +++E G P Y+
Sbjct: 641 FSKAIKL-FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYS 699
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+I G F+ + AF + ++ PN Y+ LI +C +G
Sbjct: 700 CLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKG 744
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + L+ G ESA ++ KM+ P++ +++ LI+ +CK G
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + DV Y ILI K G + EA L +++ +G P L
Sbjct: 746 MEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKA 805
Query: 121 IIKGAFRRGQ 130
+ + F+ Q
Sbjct: 806 LAEYGFQDSQ 815
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P R +L++ + G + A +M+++M + P++ T+ LI+ +C+ G+
Sbjct: 268 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + K G C + T+ LI K G + AF+LL + + P Y
Sbjct: 328 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 387
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R + AF + G P+R Y L+ + G+ A N M G
Sbjct: 388 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 447
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F + DGL G+ + A I
Sbjct: 448 LEPDGFTFTALIDGLCKLGRLEQANGI 474
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K P V +L+ L G +E A + KM+K G P + TFN+LI CK G
Sbjct: 303 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 362
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V ++ SV + G+C ++ TY L+ + + +AF LL +V++G P Y
Sbjct: 363 VVSAFQL-LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 421
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + GQ + AF F+ + G P+ +T LI + GR +A L M +
Sbjct: 422 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 481
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G++ F + DG GK
Sbjct: 482 GISLDEVTFTALIDGHCKIGK 502
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L++G AG + +M+ +M + G P++ T+ +I +C +G
Sbjct: 548 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 607
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + +S+ G + TY +L+ A KAG +D AF+++ +V++G P +Y+
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 667
Query: 121 IIKG-------------------------------------AFRRGQFDDAFCFFSEIKI 143
++ G FR D A EIK
Sbjct: 668 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIK- 726
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
K P +Y L+ + GR +EA +M + GL P ++ K C K+D
Sbjct: 727 KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTC-KYD 784
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V L G++++A+ K+++ G D SL+ C+ ++ ++ + K
Sbjct: 177 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 236
Query: 76 SCADVS-TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+C S TY ILI + +AG ++EAF+L +VE G P Y +IK G D A
Sbjct: 237 NCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 296
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ K PN YT LI R G+ EA +M + GL P F+ + +G
Sbjct: 297 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 356
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL AG LE A Q+ +M+++G P T+ LI+ C G + ++M +
Sbjct: 247 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 306
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V TY ILI + + G I+EA + +++ G P + +I G + G A
Sbjct: 307 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 366
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F S ++ PN Y L+ R + +A L + + GL P ++++ DG
Sbjct: 367 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 426
Query: 195 LKNCGKHDLAEKI 207
G+ ++A I
Sbjct: 427 FCKEGQLNMAFNI 439
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A M+ KM+K G P + T LIE C++GE ++M + + G +V TY I
Sbjct: 538 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 597
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + G ++EA +L ++ G +P YA ++K + G+ D AF S + G
Sbjct: 598 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 657
Query: 146 HPPNRPVYTTLIT 158
PN +Y+ L++
Sbjct: 658 CQPNSHIYSALLS 670
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P L+ GL G LE A ++ M+K+G D TF +LI+ CK G+
Sbjct: 443 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ + T+ + A+ K ++EA +L +++ G P +
Sbjct: 503 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTI 562
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R G+ + +K G PN YT +I GR EA L M+ G
Sbjct: 563 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 622
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++P + ++ G+ D A +I
Sbjct: 623 VSPNHFTYAVLVKAHVKAGRLDRAFQI 649
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ G G++ SA Q+++ M K P++ T+N L+E +C+ +
Sbjct: 338 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V G D TY IL+ K G ++ AF + +++ G P +
Sbjct: 398 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A + KG + +T LI + G+ + M E
Sbjct: 458 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 517
Query: 181 LTPISRCFDLVTDGL 195
+ F+ D L
Sbjct: 518 CLTTAHTFNCFLDAL 532
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Query: 26 LESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYK 84
L A ++ KM K+ P+ T++ LI +C++G +E ++ + + G TY
Sbjct: 222 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 281
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+LI A GM D+A ++L + P Y +I R G+ ++A F ++
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
G P + LI + G V A L M + P R ++ + +GL
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 392
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 5/210 (2%)
Query: 1 MSDKGF--NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M++ GF + P L+ LN G++ A + +M+ +G + +++ +CK+
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFV--AFLVYRRMVNEGFVLGGIDYRTVVNALCKN 184
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFPSL 117
G V+ V +LG D L+ A + + EAFR+ + E+ P
Sbjct: 185 GFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVT 244
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y+ +I G G+ ++AF E+ KG P+ YT LI G +A L EM
Sbjct: 245 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 304
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ D L GK + A +
Sbjct: 305 TKACVPNVHTYTILIDRLCREGKIEEANGV 334
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV GL G + A Q+ M+K G PD + +S+IE CK+ + + C+E V
Sbjct: 737 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLD 795
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
++Y +I + G + EA +L+ +LV
Sbjct: 796 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ N+M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G ++ A+ + + + K G P +FN+L+ + G+++ + ++
Sbjct: 140 NILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D A L + ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G +C + DL E
Sbjct: 320 G--SCKEGDLETAFE 332
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + ++ G L FN L+ CK GE++
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G ++ L+ + G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + D A F+E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + + EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YVP 414
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLMKEMQRDGYVPS 415
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 75/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P + ++ G R G D+ F
Sbjct: 132 YPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P VR +L+ GL AG + M +QG D +N++++ +CKSG+
Sbjct: 551 MKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + V+TY ++ ++K +DEA+ L G LY+
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A+ E+ KG PN + +L+ + EA M EM
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK 730
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P + + ++ +GL K++ A
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKA 754
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 36/245 (14%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P + ++++ L AG + A ++ ++M G P+L + N +++ +CK+ ++E
Sbjct: 379 KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEE 438
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ S + G + TY LI + K G ID+A+RL +++ GH+ P +Y +I+
Sbjct: 439 AHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIR 498
Query: 124 GAFRRGQFDDAFCFFSE-IKIKGHP----------------------------------P 148
F G+ +D + E I+ G P P
Sbjct: 499 NFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLP 558
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA-EKI 207
+ Y+ LI + G+ E +N M++ G +R ++ V DGL GK D A E +
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVL 618
Query: 208 EQLEV 212
E+++V
Sbjct: 619 EEMKV 623
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + + + AG +E + + M G PD+ +++ LI + K+G+
Sbjct: 516 MIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D Y ++ + K+G +D+A+ +L + +P + Y
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + + D+A+ F E K KG N +Y++LI G+ GR EA L EM + G
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695
Query: 181 LTPISRCFDLVTDGL 195
LTP ++ + D L
Sbjct: 696 LTPNVYTWNSLMDAL 710
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
++K+ + P++ T+N +I+ +C +G V ++ + G ++ + I++ + KA
Sbjct: 376 VMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQ 435
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++EA R+ + E G NP Y +I G ++G+ DDA+ F ++ GH N +YT+
Sbjct: 436 LEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTP 183
LI GR + EM G P
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRP 523
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+K+G P++ T+NSL++ + K+ E++ + + S+ ++
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK 730
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ILI + + ++AF + + G P Y +I G + G DA+
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAY 790
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
F K G P+ + LI R +EA
Sbjct: 791 SLFERFKTNGGIPDSASFNALIEGMSNANRPMEA 824
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G+ V LV+ L G +E A +V+++ +PD+ +N I+ K+G
Sbjct: 202 MQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGS 261
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D +Y ++ + KAG + EA L + + P Y
Sbjct: 262 VDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNT 321
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +FDDA+ ++ +G P+ + +++T G+ R V+ A L ++ +
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGK-KRKVDEALTLFDVMKKD 380
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEVS 213
P ++++ D L G+ + A KI +++E++
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELA 414
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G+ P LV L+ + LE A +++ M P + LI + ++ +
Sbjct: 132 MSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQ 191
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + +G V + L+ A+++ G ++ A L+ + P LY
Sbjct: 192 PERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNV 251
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G D A+ FF E+K G P+ YT+++ + + GR EA +M
Sbjct: 252 CIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAER 311
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + G + + D A K+
Sbjct: 312 DVPCAYAYNTMIMGYGSAERFDDAYKL 338
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 1/185 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG ++ A + +++ G PD ++ S++ +CK+G + E++ +
Sbjct: 259 AGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYA 318
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y +I A D+A++LL L E G P + I+ ++ + D+A F +K
Sbjct: 319 YNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK 378
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
K PN Y +I M GR EA EM GL P +++ D L + +
Sbjct: 379 -KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLE 437
Query: 203 LAEKI 207
A +I
Sbjct: 438 EAHRI 442
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ L+ ++ A M + P+ T++ LI +C+ +
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G +V TY +I ++K G I +A+ L +G P + +
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G + +A+ F E +++G
Sbjct: 811 LIEGMSNANRPMEAYQVFEETRLRG 835
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + +V G+ AG +E A+++ ++M+++G PD ++N+L+ CK+G
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G DV T+ LI + KAG ++ A L+ + E G +
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G DDA +K P+ Y LI GR EA L EM G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
L P + + KNC H E +Q+
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQM 461
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V + ++ L +A L SA++ + M+ G P++ T+N L+ +C G +
Sbjct: 151 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G +V TY L+ A +AG +D A RL+ + E G P + ++ G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +DA F E+ +G P+ Y TL+ + G EA + EMT+ G+ P
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP- 328
Query: 185 SRCFDLVT 192
D+VT
Sbjct: 329 ----DVVT 332
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + LV AG ++ A+++V M + G P+L TFNS++ +CK+G+
Sbjct: 216 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + + G D +Y L+ KAG EA + + + G P +
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G + A +++ +G N +T LI + G +A + M +
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P C++ + +G G+ D A ++
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEAREL 422
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++LV+ L G+ + A ++ M G P++ T+N+L+ ++GE
Sbjct: 181 MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 240
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G ++ T+ ++ + KAG +++A ++ +V +G P Y
Sbjct: 241 VDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNT 300
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G +A F+E+ KG P+ +T+LI + + G A + +M E G
Sbjct: 301 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERG 360
Query: 181 LTPISRCFDLVTDG 194
L F + DG
Sbjct: 361 LQMNEVTFTALIDG 374
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
P V + L+ G G ++ A++++++M +G PD+ T++++I CK+ +
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 455
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E+ + + G D TY LI + + +A L N+++ G P Y +I G
Sbjct: 456 ELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 515
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G + A ++ G P+ Y+ LI + R +EA L ++ P +
Sbjct: 516 CKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPAN 575
Query: 186 RCFD 189
+D
Sbjct: 576 TKYD 579
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 15/200 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ L L A + MIK G PD T+ SLI+ CK G
Sbjct: 461 MLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY-- 118
VE + ++ + K G DV TY +LI +SK+ EA +LL L + P + Y
Sbjct: 521 VESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDA 580
Query: 119 -------------APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
++KG +G ++A + + + + VY+ LI R G
Sbjct: 581 LMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 640
Query: 166 FVEAANYLMEMTEMGLTPIS 185
++A ++ +M + G P S
Sbjct: 641 VMKALSFHKQMLQGGFAPNS 660
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G+L+ A V M + P + +N+LI C G ++ E+ + + G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +I A K AF L ++E G P Y+ +I+ + DA
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + G P+ YT+LI + G A + +M + G+ P + ++ +GL
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550
Query: 196 KNCGKHDLAEKI 207
+ A+++
Sbjct: 551 SKSARAMEAQQL 562
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 1/160 (0%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G P + +N+++ + + + S+ G +V TY IL+ A+ G EA
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+L ++ G P Y ++ FR G+ D A ++ G PN + +++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+ G+ +A EM GL P ++ + G G
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAG 309
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V Y ++ A+S A + A R +++ DG P Y +++ RG +A
Sbjct: 151 GYVPSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+++ G PN Y TL+ R G A + M E GL P F+ + +G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 195 LKNCGKHDLAEKI 207
+ GK + A K+
Sbjct: 270 MCKAGKMEDARKV 282
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ +N +L+ G AG + A +M++ G P+ + SLI + ++G
Sbjct: 616 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGM 675
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
V ++ + S AD K LI G +D +LH + +DG P P
Sbjct: 676 VVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSP 730
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++++GL G ++ A + M + G D T+ L++ CK+G + + + +
Sbjct: 63 NIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEE 122
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D Y +I + K +DEA +L+ ++++G P +Y +I G +FDD
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDD 182
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ P Y TLI +G RF EA + + EM E G P + L+
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMK 242
Query: 194 GLKNCGKHDLAEKIEQLEVS 213
GL K ++A ++ +S
Sbjct: 243 GLCQGHKVEMALQLWNQVIS 262
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ +P + ++ G AG ++ ++ M ++ S ++ +FN ++ + +G+
Sbjct: 16 MAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREXSQ-NVVSFNIMMRGLFGNGD 74
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D +TY IL+ K G I+++ R+L E G Y+
Sbjct: 75 VDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSA 134
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A + + G PN VY TLI +F +A EM
Sbjct: 135 MINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTN 194
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+P ++ + +GL C AE
Sbjct: 195 CSPTVVTYNTLINGL--CKGERFAE 217
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+ P V LL++GL +E A Q+ N++I G PD++ N LI +C G+
Sbjct: 225 MLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y+ + + ++ T+ L+ K G I A + ++ +G P Y
Sbjct: 285 TQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNI 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+KG + A F + K P+
Sbjct: 345 TLKGLCSCSRISFAILFLQDALAKKIAPS 373
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G + + A ++ +M P + T+N+LI +CK
Sbjct: 155 MIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGER 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V TY +L+ + + ++ A +L + ++ +G P +
Sbjct: 215 FAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNI 274
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ A + ++ PN + TL+ + G A + G
Sbjct: 275 LIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNG 334
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P +++ GL +C + A
Sbjct: 335 LQPDIVSYNITLKGLCSCSRISFA 358
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 89/174 (51%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + +++ GL L+ A ++ + ++ G +PD T+N I+ +CK+ V+ +
Sbjct: 38 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + TY L+ + KAG +DEA +L +VE G++P Y +I G
Sbjct: 98 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLS 157
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G+ ++A F ++ G P+ VYT LI+ + G+ EA YL +M E G
Sbjct: 158 KAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENG 211
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G L+ A ++++M PD+ F +I +C+ ++ + + G
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY + I + KA +D+AF+LL + E P Y ++ G + G+ D+A
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ KG+ P YT +I + GR EA ++M G P + + + GL
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Query: 196 KNCGKHDLA 204
GK D A
Sbjct: 192 AKIGKLDEA 200
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 5/208 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P LV GLL AG L+ A ++ +M+++G+ P L+T+ +I+ + K+G
Sbjct: 102 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGR 161
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED----GHNPFPS 116
VE ++ + G D Y LI ++K G +DEA L+ +VE+ G P
Sbjct: 162 VEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVV 221
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
++ +I+ G +DA +F E+ + L+ + R EA ++ +M
Sbjct: 222 IHNLVIRQLCASGNLEDALAYFDELD-DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKM 280
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+E P + + DG G+ D A
Sbjct: 281 SERRCFPTLFTYTSLVDGFLKLGRLDEA 308
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 4/193 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + +++++GL AG L A K++++ PD+ TFNS + +C+ +
Sbjct: 455 MLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLD 514
Query: 61 -VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V VE++ S+ G+ ++ +Y IL+ + +AG ++ + H +V G P ++
Sbjct: 515 TVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFN 574
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ G+ D+A F E++ + P+ Y +L+ R R EA M
Sbjct: 575 TLIRWLCIAGRVDEALEVFRELE-RRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQ 633
Query: 180 GLTPISRCFDLVT 192
G P R +DL
Sbjct: 634 GCAP--RHYDLTV 644
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++ P + LV G L G L+ A + + +++G PD T+ S+I+ +CK G
Sbjct: 280 MSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGR 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E ++ + G D TY LI KA MI +A R+ +++ G Y
Sbjct: 340 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G+ +A+ F ++ +G Y+ L+ G A M + G
Sbjct: 400 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++++ GL GK
Sbjct: 460 CEPNLVSYNIIIRGLCRAGK 479
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ P L+ G + A + A ++ +M++ G+ T+N +++ +CK+G
Sbjct: 350 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + G A V TY L+ G + A L +++ G P Y
Sbjct: 410 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
II+G R G+ A+ +F ++ + P+ + + + +C R + M
Sbjct: 470 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQ 529
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P + ++ DG+ G ++ +I
Sbjct: 530 GTSPNLHSYSILMDGICRAGGLEVTLEI 557
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P ++ + GL A ++ A Q++ KM ++ P T+ +L++ + K+G ++
Sbjct: 71 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G+ + TY ++I +SKAG ++EA R+ +++ +G P +Y +I G
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190
Query: 125 AFRRGQFDDAFCFFSEIK----IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ G+ D+A + +++ +G P+ ++ +I G +A Y E+ +
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD 248
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++GF P ++ GL G +E + ++M +G +PD T+ +LI+ K+ +
Sbjct: 317 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIP 376
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+Y + + G+ TY I++ + KAG + EA+ + E G Y+ ++
Sbjct: 377 KAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 436
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G G A F + +G PN Y +I R G+ +A Y ++ + L
Sbjct: 437 DGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC 496
Query: 183 PISRCFDLVTDGLKNCGKHD 202
P F+ GL C + D
Sbjct: 497 PDVYTFNSFLHGL--CQRLD 514
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
D +L+ +CK+G+++ + + + ++ D+ + ++I + + +DEAF +L
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVL 64
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
V G P Y I G + + DDAF ++ K P YT L+ +
Sbjct: 65 ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GR EA L +M E G +P + + +V DGL G+ + A +I
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 1/197 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V +L+++ L +G LE A +++ D TFN L+ +CK+ E
Sbjct: 214 RGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEE 272
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + TY L+ K G +DEA L VE G P Y II
Sbjct: 273 AIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIID 332
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ ++ F E++ +G+ P+ Y LI + +A +M + G
Sbjct: 333 GLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVV 392
Query: 184 ISRCFDLVTDGLKNCGK 200
+ ++++ DGL G+
Sbjct: 393 STVTYNIILDGLCKAGR 409
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 9/203 (4%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
FNP LV L A E A V KM ++ P L T+ SL++ K G ++ +
Sbjct: 257 FNP-------LVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEAL 309
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ G D TY +I + K G ++E H + G+ P YA +I G
Sbjct: 310 LQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGF 369
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ A + ++ G + Y ++ + GR EA + M E G
Sbjct: 370 MKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV 429
Query: 186 RCFDLVTDGLKNCGKHDLAEKIE 208
+ + DG C + +++ +E
Sbjct: 430 VTYSALMDGF--CSEGNVSAAVE 450
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 6/215 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +++ L AG + A +K+ + G D +N LI +C++G
Sbjct: 362 MHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGR 421
Query: 61 VE---FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ F VE + + G +++T+ LI A + + A +LL + E NP
Sbjct: 422 LQDANFVVEEMH---RTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKT 478
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y P++K RR + K P+ YT L+ R GR ++ +L EM
Sbjct: 479 YTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMV 538
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
G TP FDLV + LKN KI+ L +
Sbjct: 539 LKGFTPQQATFDLVLEKLKNMHMLSAVRKIQLLRM 573
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L A A +KM + G D + N L++T+CK V+ + ++ K
Sbjct: 238 VMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQAL-KGT 296
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D S++ L+ KA M+ EA + + G +P + Y +I+ F
Sbjct: 297 IPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVD 356
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
E+ KG PN YT ++ G+ GR EA + ++ + G
Sbjct: 357 GILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDG 401
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 3/172 (1%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
PD +FN+L+ CK+ ++ E + + G V+TY LI A +
Sbjct: 299 PDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGI 358
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L + G P Y ++ + G+ +A F ++K G + Y LI + R
Sbjct: 359 LDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCR 418
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
GR +A + EM G++P F+ + + H LAE +L V +
Sbjct: 419 AGRLQDANFVVEEMHRTGISPNLTTFNTLISAACD---HSLAENALKLLVQM 467
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P R +L++ + G + A +M+++M + P++ T+ LI+ +C+ G+
Sbjct: 225 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + K G C + T+ LI K G + AF+LL + + P Y
Sbjct: 285 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R + AF + G P+R Y L+ + G+ A N M G
Sbjct: 345 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 404
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F + DGL G+ + A I
Sbjct: 405 LEPDGFTFTALIDGLCKLGRLEQANGI 431
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ K P V +L+ L G +E A + KM+K G P + TFN+LI CK G
Sbjct: 260 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 319
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V ++ SV + G+C ++ TY L+ + + +AF LL +V++G P Y
Sbjct: 320 VVSAFQL-LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 378
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + GQ + AF F+ + G P+ +T LI + GR +A L M +
Sbjct: 379 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 438
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G++ F + DG GK
Sbjct: 439 GISLDEVTFTALIDGHCKIGK 459
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V L G++++A+ K+++ G D SL+ C+ ++ ++ + K
Sbjct: 134 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 193
Query: 76 SCADVS-TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
SC S TY ILI + +AG ++EAF+L +VE G P Y +IK G D A
Sbjct: 194 SCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 253
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ K PN YT LI R G+ EA +M + GL P F+ + +G
Sbjct: 254 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 313
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L++G AG + +M+ +M + G P++ T+ +I +C +G
Sbjct: 505 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 564
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + +S+ G + TY +L+ A KAG +D AF+++ +V++G P +Y+
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 624
Query: 121 IIKG-------------------------------------AFRRGQFDDAFCFFSEIKI 143
++ G FR D A EIK
Sbjct: 625 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIK- 683
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
K P +Y L+ + GR +EA +M + GL P ++ K C K+D
Sbjct: 684 KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTC-KYD 741
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL AG LE A Q+ +M+++G P T+ LI+ C G + ++M +
Sbjct: 204 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 263
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V TY ILI + + G I+EA + +++ G P + +I G + G A
Sbjct: 264 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 323
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F S ++ PN Y L+ R + +A L + + GL P ++++ DG
Sbjct: 324 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 383
Query: 195 LKNCGKHDLAEKI 207
G+ ++A I
Sbjct: 384 FCKEGQLNMAFNI 396
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A M+ KM+K G P + T LIE C++GE ++M + + G +V TY I
Sbjct: 495 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 554
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + G ++EA +L ++ G +P YA ++K + G+ D AF S + G
Sbjct: 555 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 614
Query: 146 HPPNRPVYTTLIT 158
PN +Y+ L++
Sbjct: 615 CQPNSHIYSALLS 627
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P L+ GL G LE A ++ M+K+G D TF +LI+ CK G+
Sbjct: 400 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 459
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ + T+ + A+ K ++EA +L +++ G P +
Sbjct: 460 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTI 519
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R G+ + +K G PN YT +I GR EA L M+ G
Sbjct: 520 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 579
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++P + ++ G+ D A +I
Sbjct: 580 VSPNHFTYAVLVKAHVKAGRLDRAFQI 606
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ G G++ SA Q+++ M K P++ T+N L+E +C+ +
Sbjct: 295 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 354
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V G D TY IL+ K G ++ AF + +++ G P +
Sbjct: 355 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 414
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A + KG + +T LI + G+ + M E
Sbjct: 415 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474
Query: 181 LTPISRCFDLVTDGL 195
+ F+ D L
Sbjct: 475 CLTTAHTFNCFLDAL 489
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 26 LESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYK 84
L A ++ KM K+ S P+ T++ LI +C++G +E ++ + + G TY
Sbjct: 179 LGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+LI A GM D+A ++L + P Y +I R G+ ++A F ++
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
G P + LI + G V A L M + P R ++ + +GL
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 349
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 5/210 (2%)
Query: 1 MSDKGF--NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M++ GF + P L+ LN G++ A + +M+ +G + +++ +CK+
Sbjct: 84 MTELGFRLSYPCYSTLLMCLAKLNMGFV--AFLVYRRMVNEGFVLGGIDYRTVVNALCKN 141
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFPSL 117
G V+ V +LG D L+ A + + EAFR+ + E+ P
Sbjct: 142 GFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVT 201
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y+ +I G G+ ++AF E+ KG P+ YT LI G +A L EM
Sbjct: 202 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 261
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ D L GK + A +
Sbjct: 262 TKACVPNVHTYTILIDRLCREGKIEEANGV 291
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV GL G + A Q+ M+K G PD + +S+IE CK+ + + C+E V
Sbjct: 694 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLD 752
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
++Y +I + G + EA +L+ +LV
Sbjct: 753 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ + + A ++ K++K G PD TF +LI IC G+
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G DV TY LI + K G A RLL ++V+ P Y
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + Q +AF FSE+ KG P+ Y +LI + A L EM +
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQ 209
+ P F+ V D L GK HD+ +K+ Q
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + L+ G ++ A + +M +Q PD T+++LI +C ++
Sbjct: 389 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 448
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +++ + ++ TY+IL+ + K + EA LL + +P + I
Sbjct: 449 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 508
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ + A FS + KG P+ Y+ +I R G EA+ EM E G T
Sbjct: 509 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 568
Query: 184 ISRCFDLVTDG-LKN 197
++ +T G L+N
Sbjct: 569 NGCIYNTITRGFLRN 583
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L+ L YL A ++ + DPD++ N I+ +C++GE+E ++
Sbjct: 463 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 522
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ G DV TY I+I + + G++DEA +L + E+G +Y I +G R
Sbjct: 523 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 582
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ A E+ +G + T + M G
Sbjct: 583 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V + ++ L + A + ++M+ +G PD+ T+NSLI +C E
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV ++ ++ A+ K G + EA ++ +++ G P Y
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
++ G + D+A F + KG PN Y TLI + R +A +Y M
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLM 367
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 2/178 (1%)
Query: 8 PPVRGRDL--LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
PP D L+ + + + + ++M G P++ T + LI + C V F
Sbjct: 57 PPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAF 116
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + KLG D +T+ LI + G I EA L ++ +G P Y +I G
Sbjct: 117 SVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGL 176
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G A + K PN Y T+I + + EA N EM G++P
Sbjct: 177 CKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 3/203 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P L+ GL + L+ A + ++M+ P+L T+ L++ +CK+ + + +
Sbjct: 428 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 487
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ D+ I I + +AG ++ A L NL G P Y+ +I G R
Sbjct: 488 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 547
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
RG D+A F E+ G N +Y T+ R A L EM G + +
Sbjct: 548 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 607
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
L L + G L + ++Q+
Sbjct: 608 MTLFVKMLSDDG---LDQSLKQI 627
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
L+ ++ A N+M++ P FN L+ +I K + + + + G ++
Sbjct: 37 LHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI 96
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T ILI + + AF +L +++ GH P + + +I+G G+ +A F +
Sbjct: 97 YTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDK 156
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G P+ Y TLI + G A L M + P ++ + D L
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG L+ A +++++M +G P + N +I +CK+G + + +V
Sbjct: 36 LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN-PFPSLYAPIIKGAFRRGQFDDA 134
D+ T+ IL+ A+ K+G ++EAF++ ++ P Y +I G + G+ D A
Sbjct: 96 CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ G PN Y+ L+ + GR + L EMT G P ++ + +G
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 195 LKNCGKHDLAEKIEQLEVSLRS 216
L C L E +E +++ +RS
Sbjct: 216 L--CKSRRLDEALELVQLMIRS 235
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V + +++GL AG A + PD+ TFN L++ + KSG
Sbjct: 56 MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 61 VEFCVEMYYSVCKLGSC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE +++ S+ C +V TY +I + K G +D A LL + E G P Y+
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+++G + G+ D F E+ +G P+ +Y TL+ + R EA + M
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 180 GLTP 183
G P
Sbjct: 236 GCYP 239
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V +LV+GL AG + ++ +M ++G PD+ +N+L+ +CKS
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + + G V TY L+ ++ +D AFRL+ + E G P Y
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF-----VEAANYLME 175
+I G R + DDA ++ P+ Y+T+I + R +EAA ++E
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 176 -MTEMGLTPISRCFDLVTDGL 195
M + G P + + +V +GL
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGL 362
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKM-IKQGSDPDLETFNSLIETICKSGEVEFCV 65
P + ++LV L+ +G +E A Q+ M P++ T+ ++I +CK G+++ +
Sbjct: 97 TPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAI 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E+ + + G C +V TY +L+ + KAG D+ F LL + G P +Y ++ G
Sbjct: 157 ELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + D+A + G P Y +L+ + R + A + M+E G P
Sbjct: 217 CKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDV 276
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ V GL + D A+ + + V+ R V
Sbjct: 277 INYNTVIAGLCRDARLDDAQALLKQMVAARCV 308
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ GL G L+ A ++++ M + G P++ T++ L+E +CK+G + +
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTL 193
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV Y L+ + K+ +DEA L+ ++ G P Y +++ R
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
Q D AF + +G PP+ Y T+I R R +A L +M P
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313
Query: 188 FDLVTDGLKNCGKHDLAEKIE 208
+ + DGL + D K+E
Sbjct: 314 YSTIIDGLCKDWRVDADWKLE 334
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 9/217 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++G P V + ++ GL L+ A+ ++ +M+ PD+ T++++I+ +CK
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 61 V------EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
V E E+ + + G + TY ++I + +A +A LL +++ P
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
S ++ +I + D A+ F + + PN Y LI +GG V+ A +
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE-VDKAVRVF 445
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
E+ P ++ V DGL CG + E + +E
Sbjct: 446 ELMVESFRPGVATYNSVLDGL--CGVGRIEEAVRMVE 480
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
LE+A +++ M + G P+ T+ +IE +C++ + + + + + D+S++ +
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I ++ K+ +D A+++ + E P P YA +I G + G+ D A F E+ ++
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVES 451
Query: 146 HPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
P Y +++ +CG GR EA + M P + + GL
Sbjct: 452 FRPGVATYNSVLDGLCGV-GRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P + +++ L + L++A ++ M ++ P+ + +LI+ + K GE
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V ++ + + V+TY ++ + G I+EA R++ ++ P + Y
Sbjct: 438 VDKAVRVFELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGA 496
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R ++A+ F ++ KG VY L+ + R +A ++ E G
Sbjct: 497 LIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY LI + KAG +D+A+ LL + + G P +++ +I+G + G+F DA +F +
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM-TEMGLTPISRCFDLVTDGLKNCGK 200
P+ + L+ + GR EA M T P + V +GL GK
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151
Query: 201 HDLAEKIEQLEV 212
D A IE L++
Sbjct: 152 LDRA--IELLDL 161
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 15/189 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDP--------------DLE 46
M + G +P V + L+ GL AG LE A+ + +KM + G++P D E
Sbjct: 450 MGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTE 508
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ L++ +C+SG+V ++ + + G DV TY LI + KA +D A RL L
Sbjct: 509 SLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKEL 568
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G +P Y +I G +R + +DA F I G P+ P+Y T++ R +
Sbjct: 569 QLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKL 628
Query: 167 VEAANYLME 175
+A N ++
Sbjct: 629 SQAINLWLD 637
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P + + Q L++ G + A + N+M+ G P+ T+ L++ +CK G
Sbjct: 170 MGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGM 229
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++M+ + + G DV Y +L+ ++ G I++A RLL ++ E+G P Y
Sbjct: 230 AVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTV 289
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + G+ D+AF F ++ G Y+ LI + GRF E +Y EM
Sbjct: 290 FLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKS 349
Query: 181 LTP 183
++P
Sbjct: 350 ISP 352
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V+ +L+ L N G +E A +++ M + G PD T+ + +CK+G
Sbjct: 240 MLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGR 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + G + Y LI + +AG DE ++ +P +LY
Sbjct: 300 VDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTI 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G+ DAF E+K KG P+ Y TL+ G A + + EM +
Sbjct: 360 LIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNN 419
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ S +++ GL G D A ++
Sbjct: 420 VVLDSTTHNIMICGLCKKGLIDKAMQV 446
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKGF P + L++ L + G ++ A+ ++++M++ D T N +I +CK G
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY-- 118
++ ++++ + + G V TY LI + +AGM++EA L H + E G+NP SL+
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNP--SLFLR 496
Query: 119 --------------APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
++ G + GQ A+ I G P+ Y TLI +
Sbjct: 497 LTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAK 556
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
A E+ G++P + + DGL + + A + Q
Sbjct: 557 NLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQ 601
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 84/198 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P LV +AG + A + ++M P +N++ + + G +
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ +Y + G + +TY +L+ + K GM +A ++ ++E G P +Y ++
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ +DA +K G PP+ YT ++ + GR EA + + + G T
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318
Query: 185 SRCFDLVTDGLKNCGKHD 202
+ + DGL G+ D
Sbjct: 319 LIGYSCLIDGLFQAGRFD 336
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 106/231 (45%), Gaps = 16/231 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P + +L++ AG + A ++++M +G PD +N+L++ + G
Sbjct: 345 MLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGN 404
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + D +T+ I+I + K G+ID+A ++ + E G +P Y
Sbjct: 405 IDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNA 464
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP--------------NRPVYTTLITMCGRGGRF 166
+I G +R G ++A F ++++ +P + + MC + G+
Sbjct: 465 LIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMC-QSGQV 523
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++A L + E G+ P ++ + +GL D A ++ + E+ L+ +
Sbjct: 524 LKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFK-ELQLKGI 573
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F +L+ +G + VE + + Y + + G+I A L + +
Sbjct: 146 AFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRM 205
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
V G P + Y ++ G +RG DA F E+ +G P+ +YT L++ GR
Sbjct: 206 VSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRI 265
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
+A L M E G P + + GL G+ D A + E L+
Sbjct: 266 EDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ 311
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF+P + ++L+ L + G L +A + N+++K+ +P + T+ LIE G
Sbjct: 115 MKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATLLQGG 174
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + ++ DV Y +I + + G +D AF ++ ++ G+ Y
Sbjct: 175 IDEAIKLLDEMFEINLQPDVFPYNSII-XMCREGYVDRAFEVISSISSKGYALDVITYNI 233
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ +G+++ F S++ KG N Y+ LI+ R G+ E L +M + G
Sbjct: 234 LLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKG 293
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
L P C+D + L G+ DLA IE L+V
Sbjct: 294 LEPDGYCYDPLIAVLCKEGRVDLA--IEVLDV 323
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG+ V ++L++ L N G E+ ++++ M+ +G + ++ T++ LI ++C+ G+
Sbjct: 219 ISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGK 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE V + + K G D Y LI + K G +D A +L ++ DG P Y
Sbjct: 279 VEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNT 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ ++ + D+A F ++ G PN Y T+ + G G V A ++EM +
Sbjct: 339 ILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLD 396
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ FNP V +L++ L G ++ A +++++M + PD+ +NS+I +C+ G V+
Sbjct: 153 ENFNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSII-XMCREGYVDR 211
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ S+ G DV TY IL+ ++ G + F L+ ++V G Y+ +I
Sbjct: 212 AFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLIS 271
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
R G+ ++ ++K KG P+ Y LI + + GR A L M G P
Sbjct: 272 SLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVP 331
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
GY++ A ++++ + +G D+ T+N L+ ++ G+ E E+ + G A+V TY
Sbjct: 207 GYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTY 266
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
+LI ++ + G ++E LL ++ + G P Y P+I + G+ D A +
Sbjct: 267 SVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMIS 326
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
G P+ Y T++ + R EA + ++ E+G +P + ++ V L + G
Sbjct: 327 DGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSG 382
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 36/215 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P D L+ L G ++ A ++++ MI G PD+ +N+++ +CK
Sbjct: 289 MKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKR 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKI----------------------------------L 86
+ + ++ + ++G + S+Y L
Sbjct: 349 ADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXVDPDVIAYNSL 408
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIK 144
I + + GM+DEA LL ++ + PS+ Y ++ G R G+ DA + + K
Sbjct: 409 ISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDK 468
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
G PN YT LI G GG +A + + M
Sbjct: 469 GCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNM 503
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++G + + + ++ G A V MIK G DPD+ T+N LI C GE
Sbjct: 268 MSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGE 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ K G + +Y LI K G A LL + E GH P YA
Sbjct: 328 VHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAA 387
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D A +++ KG P+ +Y L++ + GR A L EM +
Sbjct: 388 LIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQN 447
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P + + DG G + A+K+ +L +
Sbjct: 448 VAPDAFITATLVDGFIRHGDFEEAKKLFELTI 479
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++L+ G + G + A+Q++ + IK+G P+ ++ LI CK GE
Sbjct: 303 MIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGE 362
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + + G D+ TY LI + AG +D A + + +VE G P ++Y
Sbjct: 363 YLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNV 422
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G+ A +E+ + P+ + TL+ R G F EA E G
Sbjct: 423 LMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKG 482
Query: 181 LTP 183
+ P
Sbjct: 483 IDP 485
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++G P + L+ GL+ AG ++ A + NKM+++G PD +N L+ +CK G
Sbjct: 373 MSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGR 432
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + D L+ + G +EA +L +E G +P Y
Sbjct: 433 LPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNA 492
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G DA F + H P+ Y+T+I + A M +
Sbjct: 493 MIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGA 552
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P + L+ +G G + AEK + +SLR
Sbjct: 553 CKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLR 587
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
M K P L++ + G ++ A + IK PD+ + NSL+ + K G
Sbjct: 92 MKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHG 151
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+VE ++Y + D T I++ + K G +++ ++L+ G P Y
Sbjct: 152 KVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYN 211
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G ++G + A F E+K+KG P Y +I + G+F L+EM+E
Sbjct: 212 TLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER 271
Query: 180 GLTPISRCFDLVTDG 194
GL ++ + D
Sbjct: 272 GLDVSIHIYNNIIDA 286
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + L+ G G E A + ++ +G P ++T+ ++I CK G+ E
Sbjct: 201 RGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEV 260
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G + Y +I A K G EA + +++ G +P + Y +I
Sbjct: 261 VDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILIT 320
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ G+ A + +G PN+ YT LI + G ++ A + L++M+E G P
Sbjct: 321 GSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKP 380
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ + GL G+ D+A
Sbjct: 381 DLVTYAALIHGLIVAGEVDVA 401
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P ++L+ GL G L +AK ++ +M+ Q PD +L++ + G+
Sbjct: 408 MVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGD 467
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + G V Y +I K GM+ +A +++ H+P Y+
Sbjct: 468 FEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYST 527
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + A F + PN YT LI G A +M +
Sbjct: 528 IIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLR 587
Query: 181 LTP 183
L P
Sbjct: 588 LKP 590
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ L+ G +E A ++ ++M+ + + D T +++ +CK G+VE ++
Sbjct: 135 PDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKL 194
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
G ++ Y LI K G + A L L G P Y II G +
Sbjct: 195 IEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCK 254
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G+F+ E+ +G + +Y +I + G +EAA+ + M + G P
Sbjct: 255 KGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMAT 314
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++++ G +CG+ AE++
Sbjct: 315 YNILITGSCSCGEVHKAEQL 334
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++V+GL G +E +++ K +G P++ +N+LI+ CK G+ E ++ +
Sbjct: 177 IMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMK 236
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V TY +I K G + +LL + E G + +Y II F+ G +A
Sbjct: 237 GFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEA 296
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G P+ Y LIT G +A L + + GL P
Sbjct: 297 ADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLP 345
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 1/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P LV G + G E AK++ I++G DP + +N++I+ CK G
Sbjct: 443 MLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGM 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + D TY +I K + A R+ +V+ P Y
Sbjct: 503 MKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTL 562
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G + A F ++ PN YT LI +G +A ++ +M
Sbjct: 563 LINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEK 622
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA-EKIEQLEVSL 214
P ++ + +GL N ++ ++ EQ E SL
Sbjct: 623 CLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSL 657
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P L+ G A ++ KM ++G PDL T+ +LI + +GEV+
Sbjct: 341 RGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDV 400
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G D + Y +L+ + K G + A LL +++ P + A ++
Sbjct: 401 ALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVD 460
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G F++A F KG P Y +I + G +A M + +P
Sbjct: 461 GFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSP 520
Query: 184 ISRCFDLVTDG 194
+ + DG
Sbjct: 521 DEFTYSTIIDG 531
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ GL G L+ A+++VN+M G PD TF +LI+ CK G+
Sbjct: 273 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E+ + + G D + +LI + + G + +A R+L +++ G P Y
Sbjct: 333 MESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++G F E++ GH P Y L+ + G+ A L M +G
Sbjct: 393 VVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVG 452
Query: 181 LTPISRCFDLVTDG 194
+ P ++++ +G
Sbjct: 453 VAPNDITYNILLEG 466
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ G AG +E ++ M + PD+ TF++LI +CK G ++
Sbjct: 171 RGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDE 230
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ +C G + T+ +LI K G +D A + ++ G P Y +I
Sbjct: 231 GSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 290
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G +A +E+ G P+R +TTLI C + G A M E G+
Sbjct: 291 GLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIEL 350
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
F ++ GL G+ AE++
Sbjct: 351 DDVAFTVLISGLCRDGRVHDAERM 374
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G+ P ++L+ G G + SA+ + +++ K+G P + +FN+LI CK+G VE
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + C DV T+ LI + K G +DE L + G P + +I
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLI 254
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ D A F + +G P+ Y LI + G EA + EM+ GL
Sbjct: 255 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLR 314
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P F + DG G + A +I++
Sbjct: 315 PDRITFTTLIDGCCKYGDMESALEIKR 341
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL G L+ + ++M +G P+ TF LI+ CK G+V+ ++
Sbjct: 210 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKN 269
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ TY LI + K G + EA RL++ + G P + +I G +
Sbjct: 270 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCK 329
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G + A + +G + +T LI+ R GR +A L +M G P
Sbjct: 330 YGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPT 389
Query: 188 FDLVTD 193
+ +V D
Sbjct: 390 YTMVVD 395
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +L+ G G ++ A + M+ QG PDL T+N+LI +CK G+
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D T+ LI K G ++ A + +VE+G +
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTV 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ DA ++ G P+ P YT ++ + G L EM G
Sbjct: 358 LISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDG 417
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++ + +GL G+
Sbjct: 418 HVPGVVTYNALMNGLCKQGQ 437
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P L+ G G +ESA ++ +M+++G + D F LI +C+ G
Sbjct: 308 MSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V M + G D TY +++ K G + F+LL + DGH P Y
Sbjct: 368 VHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNA 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
++ G ++GQ +A + G PN Y L+ + G V+
Sbjct: 428 LMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV 476
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 4/202 (1%)
Query: 6 FNPPVRGRDLLVQGL--LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
F PV+G + L++ + L LE + +++ G P+ FN L+ CK G V
Sbjct: 101 FPVPVQGCENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGS 160
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + K G V ++ LI KAG ++E FRL + + P ++ +I
Sbjct: 161 ARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALIN 220
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ D+ F E+ KG PN +T LI +GG+ A M G+ P
Sbjct: 221 GLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRP 280
Query: 184 ISRCFDLVTDGLKNCGKHDLAE 205
++ + +GL C DL E
Sbjct: 281 DLVTYNALINGL--CKVGDLKE 300
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL G + A++M+ M+ G PD T+ +++ CK G V ++ +
Sbjct: 357 VLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSD 416
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V TY L+ + K G + A LL ++ G P Y +++G + G D
Sbjct: 417 GHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV 476
Query: 135 FCFFSEIKIKGHPPNRPVYTTLIT 158
F SE KG + YT L+
Sbjct: 477 DIFNSE---KGLVKDYASYTALVN 497
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G E ++++ +M ++G + D+ TFN+LI+ +CK G+
Sbjct: 297 MQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQ 356
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ +V TY +I K G +EA L H++ E G P Y
Sbjct: 357 MELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNT 416
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+FDDA +++ G + Y LI G+ G++ +AA +M G
Sbjct: 417 LIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEG 476
Query: 181 LTPISRCFDLVTDGLKNCGKH 201
L P + + D G H
Sbjct: 477 LVPNVLTYSALIDSYSKAGMH 497
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P V ++ G G E A + + M + G PD ++N+LI+ K G
Sbjct: 367 MRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGR 426
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + ++G ADV TY LI A K G +A L + +G P Y+
Sbjct: 427 FDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSA 486
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G D F+E K G P+ +Y++LI C + G +A L EMT+ G
Sbjct: 487 LIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 546
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P ++ + D G++ A+K+E ++ ++
Sbjct: 547 IQPNIVTYNSLIDAY---GRYGQADKLEAVKANM 577
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L+ A + ++M K+G +PD TFNSLI + G E ++ + + G D+ T+
Sbjct: 287 LKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNT 346
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI AV K G ++ A ++ + +P Y+ +I G + G F++A + ++K G
Sbjct: 347 LIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESG 406
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
P+R Y TLI + + GRF +A +M +GL ++ + D GK+
Sbjct: 407 VRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKY 462
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNS-LIETICKSGEVEFCVEMYYSVCK 73
L++ L N G E A Q M++Q + S +I T+ + G+VE ++++ K
Sbjct: 169 LLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 228
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG-QFD 132
G +V Y ++ A ++G EA ++ + + G P Y II + G
Sbjct: 229 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLK 288
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F E++ +G P+R + +LI +C RGG + ++ EM G+ F+ +
Sbjct: 289 QALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLI 348
Query: 193 DGLKNCGKHDLAEKI 207
D + G+ +LA I
Sbjct: 349 DAVCKGGQMELAASI 363
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG-EVEF 63
GF V +V +G A ++ M K G P+L T+N++I+ K G +++
Sbjct: 230 GFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQ 289
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++ + K G D T+ LI S+ G+ +++ R+ + G + +I
Sbjct: 290 ALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLID 349
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ GQ + A + ++ K PN Y+T+I G+ G F EA + +M E G+ P
Sbjct: 350 AVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRP 409
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++ + D G+ D A
Sbjct: 410 DRVSYNTLIDIYAKLGRFDDA 430
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ L G +E A + N+ K G ++ +++++ +SG ++++ ++ K
Sbjct: 205 IMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKA 264
Query: 75 GSCADVSTYKILIPAVSKAGM-IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ TY +I A K G+ + +A + + ++G P + +I R G ++D
Sbjct: 265 GCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWED 324
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+ F+E++ +G + + TLI +GG+ AA+ + M ++P + + D
Sbjct: 325 SQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMID 384
Query: 194 GLKNCG 199
G G
Sbjct: 385 GYGKLG 390
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 16/187 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ AG + + + + G PD+ ++SLI++ CK G
Sbjct: 472 MKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGL 531
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-----------VED 109
VE V + + + G ++ TY LI A + G D+ + N+ +E
Sbjct: 532 VEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEV 591
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
P PS + A A F E++ G PN ++ ++ C R EA
Sbjct: 592 VRKPPPSQ-----QNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEA 646
Query: 170 ANYLMEM 176
+ L +M
Sbjct: 647 SVLLEQM 653
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 45 LETFNSLIETICKSGEVEFCVEMY-YSVCKLGSCADVSTY-KILIPAVSKAGMIDEAFRL 102
LE F L+ + GE E ++ Y + V ++ ++ S I+I + + G ++ A +
Sbjct: 163 LEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDV 222
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ + G Y+ ++ R G+ +A F +K G PN Y T+I CG+
Sbjct: 223 FNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGK 282
Query: 163 GG-RFVEAANYLMEMTEMGLTPISRCFD 189
GG +A + EM + G+ P F+
Sbjct: 283 GGVDLKQALDIFDEMQKEGVEPDRITFN 310
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + + L+ G + A+ + M + G PD+ T++ L+ET K
Sbjct: 243 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + GS D+++Y +L+ A +++G I EA + + G P + Y+
Sbjct: 303 LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G++DD F E+K+ PN Y LI + G GG F E +M E
Sbjct: 363 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G H+ A+KI
Sbjct: 423 VEPNMETYEGLIFACGKGGLHEDAKKI 449
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P + LV+ LE +++ +M GS PD+ ++N L+E +SG
Sbjct: 278 MNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGS 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + +TY IL+ + G D+ L + P + Y
Sbjct: 338 IKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNI 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F + F ++ + PN Y LI CG+GG +A L+ M E G
Sbjct: 398 LINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKG 457
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S+ + V + ++ A
Sbjct: 458 VVPSSKAYTGVIEAYGQAALYEEA 481
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 88/183 (48%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G + + + +M ++P+ T+N LI + G + V +++ + + ++ TY
Sbjct: 371 GRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETY 430
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
+ LI A K G+ ++A ++L ++ E G P Y +I+ + +++A F+ +
Sbjct: 431 EGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNE 490
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G P Y +LI M +GG + E+ L++M + G+ F+ V + + G+ +
Sbjct: 491 VGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEE 550
Query: 204 AEK 206
A K
Sbjct: 551 AIK 553
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L++ +G ++ A + +M G P+ T++ L+ + G
Sbjct: 313 MESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGR 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + + +TY ILI + G E L H++VE+ P Y
Sbjct: 373 YDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +DA + KG P+ YT +I G+ + EA M E+G
Sbjct: 433 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + G + +E I
Sbjct: 493 SKPTVETYNSLIQMFAKGGLYKESEAI 519
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M G P V L+ G +S+ +++++M K+ P + T+N++I + + G
Sbjct: 172 MPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGL 231
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------ 113
+ E + ++ + G AD+ TY L+ A ++ G+ DEA + + E G P
Sbjct: 232 DWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYS 291
Query: 114 ---------------------------FPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIK 144
FP + Y +++ + G +A F +++
Sbjct: 292 YLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGA 351
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
G PN Y+ L+ + GR GR+ + + +EM P + ++++ +
Sbjct: 352 GCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILIN 400
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++L+ GY + + + M+++ +P++ET+ LI K G E ++
Sbjct: 390 PNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKI 449
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G Y +I A +A + +EA + + E G P Y +I+ +
Sbjct: 450 LLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAK 509
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G + ++ ++ G NR + +I +GG+F EA +EM + P +
Sbjct: 510 GGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQT 569
Query: 188 FDLV 191
+ V
Sbjct: 570 LEAV 573
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 10 VRGRDL---LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
R RD +++ G E A + +M K DPD +T +++ C +G VE E
Sbjct: 529 ARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEE 588
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + LG V Y +++ +KA D+A +LL + N +++ I G
Sbjct: 589 QFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFT---NRVSNIHQVI--GQM 643
Query: 127 RRGQFDDAFCF------FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
RG +DD + F ++K +G Y TL+ G+ A L E T+ G
Sbjct: 644 IRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRG 703
Query: 181 LTP 183
L P
Sbjct: 704 LFP 706
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 4/169 (2%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P+ + +I + + G +E C E++ + G V ++ LI A + G + L
Sbjct: 144 PNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLEL 203
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRG-QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
L + ++ +P Y +I R G +++ F++++ +G + Y TL++ C
Sbjct: 204 LDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACA 263
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
R G EA M E G+ P + + + GK + EK+ +L
Sbjct: 264 RRGLGDEAEMVFRTMNEGGILPDITTYSYLVETF---GKLNRLEKVSEL 309
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + + L+ G E AK+++ M ++G P + + +IE ++
Sbjct: 418 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAAL 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + ++ ++GS V TY LI +K G+ E+ +L + + G +
Sbjct: 478 YEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNG 537
Query: 121 IIKGAFRR-GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ AFR+ GQF++A + E++ P+ ++++ G E+ E+ +
Sbjct: 538 VIE-AFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKAL 596
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ P C+ ++ + D A ++
Sbjct: 597 GILPSVMCYCMMLAVYAKADRWDDAHQL 624
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P + L+QGL N G + ++++MIK G DL+T N L++ CK G+
Sbjct: 243 MSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGK 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G DV TY LI ++EA R+ H +V G P ++
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTS 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + E+ G P+ +TTLI + GR + A + M + G
Sbjct: 363 LIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYG 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + ++ DGL C + L+E + E +S
Sbjct: 423 QVPNLQTCAVILDGL--CKGNLLSEAVSLAEAMEKS 456
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 75/170 (44%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
++ M K G +P + T +LI +C G V V + + K+ DV TY +LI +
Sbjct: 133 SVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGL 192
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
K G A L + E P +Y+ I+ G + G +A SE+ KG PN
Sbjct: 193 CKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNL 252
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
Y LI GR+ E + L EM +MG+ + +++ D GK
Sbjct: 253 VTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGK 302
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G + ++ +M K G PD+ T+ +LI C++G
Sbjct: 348 MVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGR 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++ ++ K G ++ T +++ + K ++ EA L + + + +Y+
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSI 467
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A+ FS + KG N YT +I + G +A + L+ M E G
Sbjct: 468 LLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENG 527
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + +++ GL K ++A I+ L +
Sbjct: 528 CLPDNCTYNVFVQGLLT--KKEIARSIKYLTI 557
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ + P V ++ GL G + A + ++M +G P+L T+ LI+ +C G
Sbjct: 208 MEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGR 267
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K+G D+ T IL+ A K G + +A ++ ++ G P Y
Sbjct: 268 WKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNS 327
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + ++A F + +G P+ V+T+LI + + + L EM +MG
Sbjct: 328 LIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMG 387
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + G G+
Sbjct: 388 FVPDVVTWTTLIGGFCQAGR 407
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF P V L+ G AG +AK++ M K G P+L+T +++ +CK
Sbjct: 383 MAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNL 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + ++ K ++ Y IL+ + AG ++ A+ L +L G Y
Sbjct: 443 LSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTI 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG ++G D A ++ G P+ Y + + YL M + G
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562
Query: 181 LT 182
+
Sbjct: 563 FS 564
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G ++ ++LV G + AK ++ MI G PD+ T+NSLI C +
Sbjct: 278 MIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNK 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D+ + LI K I++ LL + + G P +
Sbjct: 338 MNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTT 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F + G PN ++ +G EA + M +
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSN 457
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + ++ DG+ + GK + A ++
Sbjct: 458 LDLNIVIYSILLDGMCSAGKLNAAWEL 484
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V L+ GL G + A +V+ M K D+ T+ LI +CK+G+
Sbjct: 142 GLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAA 201
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE + + +V Y ++ + K G++ EA L + G P YA +I+G
Sbjct: 202 VEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQG 261
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G++ + E+ G + L+ + G+ ++A + + M G P
Sbjct: 262 LCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGP 320
>gi|356534139|ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Glycine max]
Length = 480
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+P ++L+ L +A ++N M + G +P + F +LI+ + ++G
Sbjct: 287 MGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGN 346
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C + + K G DV Y ++I AG I++A ++ ++ P Y
Sbjct: 347 LDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGEIEKALKMYQYMISREQVPNVFTYNS 406
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G G+FD+A E+K KG PN VY TL + G+ +A + +MTE G
Sbjct: 407 IIQGLCMAGKFDEACSMLKEMKTKGCSPNSFVYNTLASCLRNAGKTADAHEVIRQMTEKG 466
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P + ++ GLL + + + +++ G D+ T+N ++ + G+++
Sbjct: 222 FRPFKHSYNAILHGLLVLNQYKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFH 281
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + G D T+ IL+ + K A LL+++ E G P + +I G
Sbjct: 282 RLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGL 341
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-----------------MCGR------ 162
R G D FF E+ G P+ YT +IT M R
Sbjct: 342 SRAGNLDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGEIEKALKMYQYMISREQVPNV 401
Query: 163 ------------GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK-HDLAEKIEQ 209
G+F EA + L EM G +P S ++ + L+N GK D E I Q
Sbjct: 402 FTYNSIIQGLCMAGKFDEACSMLKEMKTKGCSPNSFVYNTLASCLRNAGKTADAHEVIRQ 461
Query: 210 L 210
+
Sbjct: 462 M 462
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS---DPDLETFNSLIETICK 57
M +KG R ++L++ AG AK +V + IK + P ++N+++ +
Sbjct: 182 MVEKGLPATARTFNILIRTCGEAGL---AKSLVERFIKSKTFNFRPFKHSYNAILHGLLV 238
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ + +Y + G +D+ TY I++ A + G +D+ RLL
Sbjct: 239 LNQYKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLL-------------- 284
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
E+ G P+ + L+ + G+G + + A N L M
Sbjct: 285 ---------------------DEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMR 323
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHD 202
EMG+ P F + DGL G D
Sbjct: 324 EMGIEPTVLHFTTLIDGLSRAGNLD 348
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + AD+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ + Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ + G + A+ + + + K P + +FN+L+ K G+++
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++++G P + +I G
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + + Y TLI + G +A + + EM+ GL P
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ + DG NC + DL E
Sbjct: 311 KITYTTLIDG--NCKEGDLETAFE 332
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q DL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YMP 414
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G++E E + K
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y LI + + G +A ++L ++ G P Y II ++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 136 CFFSEIKIKGHPPN 149
E++ G+ P+
Sbjct: 402 KLLKEMQRDGYMPS 415
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ G ++ A + +M +Q P+ T+N+LI +C G
Sbjct: 345 MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 404
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G D+ TY+IL+ + K +D+A LL + +P +Y
Sbjct: 405 LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 464
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ +DA FS + KG PN Y + + G EA MEM E
Sbjct: 465 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524
Query: 181 LTPISRCFDLVTDG-LKNCGKHDLAEKIEQLE 211
+ ++ +T G L+N ++ + I+ LE
Sbjct: 525 CSADGCTYNTITQGFLRN---NETSRAIQLLE 553
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M +GF P V L+ GL G+ +A +++ M K PD+ + +LI ++CK
Sbjct: 170 MIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQ 229
Query: 58 ----------------SGEVEFCVEMYYSVCKLGSCADVSTY-------KILIPAVS--- 91
S + C + Y++C LG V+T KI+ A+S
Sbjct: 230 QTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTT 289
Query: 92 ------KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
K GM+ +A ++ + + G P Y +I G R + D+A F + KG
Sbjct: 290 VVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKG 349
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
PN Y TLI + R +A EM L P + ++ + GL + G+
Sbjct: 350 CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 404
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + + LV L N G + ++N+M+ P+ + ++++ +CK G
Sbjct: 240 MITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGM 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + + G DV TY LI +DEA ++ +V G P Y
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNT 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F E+ + PN Y TLI GR +A EM G
Sbjct: 360 LINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACG 419
Query: 181 LTPISRCFDLVTDGL-KNC 198
P + ++ D L KNC
Sbjct: 420 QIPDLVTYRILLDYLCKNC 438
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V ++L+ + + A ++ K++K G PD +F +LI+ +C G+
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G DV Y LI + K G A RLL ++ + P +Y
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + Q AF FSE+ KG PN +L+ G + L EM +
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 181 LTPISRCFDLVTDGLKNCG----KHDLAEKIEQ 209
+ P + V D L G HD+ + + Q
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQ 312
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ G ++ A ++ + M+ +G P++ ++N+LI CK
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ +C+ + TY LI + G + +A L +V G P Y
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRI 429
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + D A I+ P+ +YT +I R G +A + ++ G
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++++T GL G D A K+
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKL 516
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 5/220 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + L+ GL + G L+ A + +M+ G PDL T+ L++ +CK+
Sbjct: 380 MCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCH 439
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ D+ Y I+I + +AG +++A L NL G P Y
Sbjct: 440 LDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNI 499
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G +RG D+A F E+ + Y T+ R A L EM G
Sbjct: 500 MTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559
Query: 181 LT-PISRCFDLV----TDGLKNCGKHDLAEKIEQLEVSLR 215
+ +S LV DGL H L + L + ++
Sbjct: 560 FSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVK 599
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
KM G ++ T N LI + C V F + + KLG D +++ LI + G
Sbjct: 99 KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
I EA L ++ +G P +YA +I G + G A ++ P+ VY
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLV 191
TLI + + +A N EM G++P I C LV
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLV 256
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L++GL G + A + +KMI +G PD+ + +LI +CK+G
Sbjct: 139 GCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAA 198
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + S+ K G+C DV Y LI ++ K +AF L ++ G +P ++
Sbjct: 199 IRLLRSMEK-GNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVY 257
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G++ +E+ PN TT++ + G +A + + M + G+ P
Sbjct: 258 ALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEP 317
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ + DG +C + ++ E ++ ++
Sbjct: 318 DVVTYTALIDG--HCLRSEMDEAVKVFDM 344
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L+ L +L+ A ++ + DPD++ + +I+ +C++GE+E ++
Sbjct: 422 PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDL 481
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ G +V TY I+ + K G++DEA +L + E+ + Y I +G R
Sbjct: 482 FSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLR 541
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A E+ +G + T L+ M G A+ L +M +
Sbjct: 542 NNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDT 601
Query: 188 FDLVTDGLKNCGK--HDLAEKIEQLE 211
D + GK DL + +E+LE
Sbjct: 602 VFCKEDDINALGKVISDLNDWLEELE 627
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
L+ L+ A N+M+ P + F ++ +I K + + + G +V
Sbjct: 50 LHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNV 109
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T +LI + ++ AF +L +++ G P + + +IKG GQ +A F +
Sbjct: 110 YTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDK 169
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +G P+ +Y TLI + G A L M + P
Sbjct: 170 MIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQP 212
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + LV GL+N+ ++ESA+++ M PD+ T+N++I+ C+ G+
Sbjct: 205 MKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGK 264
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ D TY LI A G D L H + E G P +Y+
Sbjct: 265 TRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSL 324
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + + F + KG N +YT LI + G EA M + G
Sbjct: 325 VIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEG 384
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + ++ + L G+ D E +E +E
Sbjct: 385 LEPDEVTYGVIVNSLCKSGRLD--EALEYME 413
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V L+ G + A + +M K+G +PD T+ ++ ++CKSG
Sbjct: 345 MISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGR 404
Query: 61 VEFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ +E Y C G + Y LI + K+G +DEA R+ + +V+ G P Y
Sbjct: 405 LDEALE-YMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYN 463
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G+ D+A +++ G YT LIT R R EA M +
Sbjct: 464 ALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDK 523
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+TP + F ++ GL GK A KI
Sbjct: 524 GITPTAAAFRALSTGLCLSGKVARACKI 551
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+Q G +S + ++M ++G + ++ +I +CK G+ ++ ++ G
Sbjct: 290 LIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKG 349
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+V+ Y LI + +K G + EA L + ++G P Y I+ + G+ D+A
Sbjct: 350 CKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEAL 409
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ KG N Y++LI G+ GR EA EM + G P S C++ + D L
Sbjct: 410 EYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDAL 469
Query: 196 KNCGKHDLA 204
CGK D A
Sbjct: 470 AKCGKIDEA 478
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++V L +G L+ A + + +G + ++SLI+ + KSG
Sbjct: 380 MKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGR 439
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++Y + K G D Y LI A++K G IDEA L + DG + Y
Sbjct: 440 VDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTI 499
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G FR + ++A + + KG P + L T G+ A L EM MG
Sbjct: 500 LITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMG 559
Query: 181 LTPISRCFDLVT 192
+ P + D++
Sbjct: 560 VIPETAFDDMIN 571
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P L++ GL G + MI +G ++ + +LI++ K G
Sbjct: 310 MDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGN 369
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + K G D TY +++ ++ K+G +DEA + G Y+
Sbjct: 370 MGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSS 429
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A F E+ KG PP+ Y LI + G+ EA M G
Sbjct: 430 LIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDG 489
Query: 181 LTPISRCFDLVTDGL 195
+ ++ GL
Sbjct: 490 CDQTVYTYTILITGL 504
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL +G ++ A+++ +M+K+G PD +N+LI+ + K G+++ + + + G
Sbjct: 430 LIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDG 489
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY ILI + + +EA L +++ G P + + + G G+ A
Sbjct: 490 CDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARAC 549
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ G P + +I + + GR EA + + G R ++ + L
Sbjct: 550 KILDEMAPMGVIP-ETAFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINAL 608
Query: 196 KNCGKHDLAEKIEQLEVSL 214
+ G DLA K+ + ++ +
Sbjct: 609 RKAGNADLALKLMRSKIGI 627
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G L+S K + +K + G + + NSLI++ G VE + ++ + + G
Sbjct: 150 LIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENG 209
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ +Y L+ + + I+ A R+ + P Y +IKG G+ AF
Sbjct: 210 IEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAF 269
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++++ P++ Y TLI C G F EM E GL + LV GL
Sbjct: 270 EKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGL 329
Query: 196 KNCGKH 201
GK
Sbjct: 330 CKDGKR 335
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L GL +G + A +++++M G P+ F+ +I +CK+G
Sbjct: 520 MIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPE-TAFDDMINILCKAGR 578
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ ++ + G +LI A+ KAG D A +L+ + + G++ S+
Sbjct: 579 IKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGIGYDRMGSV 635
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL++ ++ A+++ ++M + G DPD T++ +++ + KS +E +++ + G
Sbjct: 772 LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ M+DEA L + L+ +G +P P Y P++ G + G +DA
Sbjct: 832 YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ G PN +Y L+ G + M E G+ P + + +V D L
Sbjct: 892 ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P L+ GLL G +E A+ + ++M++ G +P+ +N L+ +G+ E
Sbjct: 865 EGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEK 924
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E++ S+ + G D+ +Y ++I + G +++ L + G P Y +I
Sbjct: 925 VCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIH 984
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ ++A +++++ KG PN Y +LI G+ G+ EA E+ G P
Sbjct: 985 GLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKP 1044
Query: 184 ISRCFDLVTDGLKNCG 199
++ + G G
Sbjct: 1045 NVFTYNALIRGYSVSG 1060
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L+Q L +AG L AK + KM PD T+ +L++ SG+
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++ ++ G +V +Y + A+ + G +DEA + + + G P Y
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F+ A F+ + I G PN + I G+ G ++A M G
Sbjct: 387 LISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKG 446
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V GL G+ +A+++
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+ + ++ GL+ + L+ A + +++ +G P T+ L++ + K G
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G + + Y IL+ AG ++ L ++VE G NP Y
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +D +F ++ G P+ Y LI G+ GR EA + +M + G
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + L GK A K+
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKM 1033
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G NP ++ +++ L G L ++ G +PDL T+N LI + KSG
Sbjct: 932 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 991
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y + K G ++ TY LI + KAG EA ++ L+ G P Y
Sbjct: 992 LEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNA 1051
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G G ++AF + + + G PN Y L
Sbjct: 1052 LIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + ++ L AG LE A +++ KM ++G PD+ T LI+ +C +G
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + D TY L+ +G + + L DG+N Y
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G+ D+A F E+K KG P + Y +LI+ + RF A M G
Sbjct: 352 AVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411
Query: 181 LTP 183
TP
Sbjct: 412 PTP 414
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++L+ G AG E ++ M++QG +PD++++ +I+T+C G
Sbjct: 897 MLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGR 956
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + +G D+ TY +LI + K+G ++EA L +++ + G P Y
Sbjct: 957 LNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNS 1016
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I + G+ +A + E+ KG PN Y LI
Sbjct: 1017 LILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALI 1053
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL G L AK++ +++ G PD T+ +I+ K+
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + + DV LI + KAG +EA+++ + L E P Y
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + + PPN Y T++ + G A + L MT G
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ V GL G+ D A
Sbjct: 622 CMPDLSSYNTVMYGLVKEGRLDEA 645
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ G L A A ++ N M G P+ T I KSGE
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G DV ++ ++K G + A R+ H L G +P Y
Sbjct: 432 SLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTM 491
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + D+A F+E+ P+ +LI M + GR EA E+ EM
Sbjct: 492 MIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMN 551
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ + GL GK
Sbjct: 552 LEPTDCTYNTLLAGLGREGK 571
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL G ++ Q++ M P++ T+N++++ +CK+GEV + ++M YS+
Sbjct: 560 NTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTM 619
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+S+Y ++ + K G +DEAF + + + P + I+ R G +
Sbjct: 620 NGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKE 678
Query: 134 AFCFFSE--IKIKGHPPNRPVYTTLITMCGRGG-----RFVE-AANYLMEMTEMGLTPIS 185
A E ++ V++ + + R G F E A+ + + ++ L+PI
Sbjct: 679 ALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPII 738
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
R F + L H+L +K E L VSL++
Sbjct: 739 RHFCKHKEAL---AAHELVKKFENLGVSLKT 766
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ +G+ A + M G P + T++ L+ K + E V + + G
Sbjct: 177 LIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARG 236
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y I I + +AG ++EA+R+L + E+G P +I+ G+ DA
Sbjct: 237 VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAK 296
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P+R Y TL+ CG G + + G + D L
Sbjct: 297 DVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDAL 356
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 357 CQVGRVDEA 365
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+N V V L G ++ A + ++M ++G P ++NSLI K+
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E++ + G + T+ + I K+G +A + + G P ++ G
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ A F E+K G P+ YT +I C + EA EM E P
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + D L G+ + A KI
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKI 543
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ L AG A ++ ++ + +P T+N+L+ + + G+V+ +++
Sbjct: 519 PDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQL 578
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ TY ++ + K G ++ A +L+++ +G P S Y ++ G +
Sbjct: 579 LEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVK 638
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
G+ D+AF F ++K K P+ T++ R G EA + + E
Sbjct: 639 EGRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVRE 685
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 2/198 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G+L E + + + G D + +I CK E E+ LG
Sbjct: 702 LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLG 761
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+Y LI + +ID A L + G +P Y I+ + + +D
Sbjct: 762 VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 821
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG+ Y T+I+ + EA N ++ G +P + + DGL
Sbjct: 822 KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 881
Query: 196 KNCGKHDLAEKI--EQLE 211
G + AE + E LE
Sbjct: 882 LKDGNIEDAEALFDEMLE 899
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL++ ++ A+++ ++M + G DPD T++ +++ + KS +E +++ + G
Sbjct: 75 LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 134
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ M+DEA L + L+ +G +P P Y P++ G + G +DA
Sbjct: 135 YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 194
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ G PN +Y L+ G + M E G+ P + + +V D L
Sbjct: 195 ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 254
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P L+ GLL G +E A+ + ++M++ G +P+ +N L+ +G+ E
Sbjct: 168 EGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEK 227
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E++ S+ + G D+ +Y ++I + G +++ L + G P Y +I
Sbjct: 228 VCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIH 287
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ ++A +++++ KG PN Y +LI G+ G+ EA E+ G P
Sbjct: 288 GLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKP 347
Query: 184 ISRCFDLVTDGLKNCG 199
++ + G G
Sbjct: 348 NVFTYNALIRGYSVSG 363
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+ + ++ GL+ + L+ A + +++ +G P T+ L++ + K G
Sbjct: 130 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 189
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G + + Y IL+ AG ++ L ++VE G NP Y
Sbjct: 190 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 249
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +D +F ++ G P+ Y LI G+ GR EA + +M + G
Sbjct: 250 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 309
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + L GK A K+
Sbjct: 310 IAPNLYTYNSLILYLGKAGKAAEAGKM 336
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G NP ++ +++ L G L ++ G +PDL T+N LI + KSG
Sbjct: 235 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y + K G ++ TY LI + KAG EA ++ L+ G P Y
Sbjct: 295 LEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNA 354
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G G ++AF + + + G PN Y L
Sbjct: 355 LIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++L+ G AG E ++ M++QG +PD++++ +I+T+C G
Sbjct: 200 MLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGR 259
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + +G D+ TY +LI + K+G ++EA L +++ + G P Y
Sbjct: 260 LNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNS 319
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I + G+ +A + E+ KG PN Y LI
Sbjct: 320 LILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALI 356
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V + ++ E A Q++ M +G PD+ ++NS IE K +
Sbjct: 488 MPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQ 547
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + G D+ +Y + A +K+G EA LL ++ G P Y
Sbjct: 548 WELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGA 607
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + Q+D A E++ G PN Y+ I C + GR+ EA + L ++ G
Sbjct: 608 AIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQG 667
Query: 181 LTPISRCFDLVTDGLKNC 198
LTP ++ + V + C
Sbjct: 668 LTPDAQTYLTVISAFQRC 685
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI--KQGSDPDLETFNSLIETICKS 58
M +G P V + + G + A ++ +M+ +G PD+ T+NS I
Sbjct: 136 MPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNG 195
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G + +++ + G ++ TY I A +K +EA LL ++E G P Y
Sbjct: 196 GRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTY 255
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
P+I + G++ +A ++ P + Y+++I CGRG R+ EA + L +M
Sbjct: 256 NPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRT 315
Query: 179 MGLTPISRCFDLVTDGLKNCGKHD 202
G++P ++ D C K D
Sbjct: 316 QGVSPNVISYNSAIDA---CAKGD 336
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC--KLGSCADVSTYKI 85
+A +++ +M +G PD+ T+NS I K G + +++ + G DV TY
Sbjct: 128 TAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNS 187
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
I A S G EA LL +V G P Y I + ++++A E+ +G
Sbjct: 188 AIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQG 247
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
PP+ Y +I C +GGR++EA + L +M
Sbjct: 248 FPPSTRTYNPVIDACAKGGRWLEAMDLLGQM 278
Score = 70.1 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
+N ++E A +++ +M QG P+ ++NS ++ K G+ E V++ + +GS D+
Sbjct: 369 VNGRWVE-ALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDI 427
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
++ I A + + A LL + G P Y I+ R ++ +A F E
Sbjct: 428 ISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFRE 487
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT--DGLKNC 198
+ +G PN Y ++I C +G ++ A L M G+ P D+++ ++ C
Sbjct: 488 MPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAP-----DVISYNSAIEAC 542
Query: 199 GKHDLAEKIEQLEVSLR 215
GK EQ E++L+
Sbjct: 543 GKG------EQWELALQ 553
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G +P + + + E+A +++ +M G P++ T+NS IE +S
Sbjct: 418 MSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSAR 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY +I A +K + A +LL + G P Y
Sbjct: 478 WQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNS 537
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + Q++ A + +G P+ Y + +T C + GR+ EA L +M +G
Sbjct: 538 AIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVG 597
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
LTP + + + CGK EQ +V++R
Sbjct: 598 LTPNTVSYGA---AIHACGKG------EQWDVAVR 623
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G D ++N I + V + + G DV TY I A SK G EA
Sbjct: 105 GGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEA 164
Query: 100 FRLLHNLV--EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
LL +V +G P Y I G++ +A ++ +G PPN Y + I
Sbjct: 165 MDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAI 224
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
C +G R+ EA + L E+ E G P +R ++ V D G+
Sbjct: 225 GACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGR 267
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 41/242 (16%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + + N G + A ++ +M+ QG P+L T+NS I K E
Sbjct: 176 EGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEE 235
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---LYAP 120
+++ V + G TY +I A +K G EA LL ++ N P+ Y+
Sbjct: 236 AMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLT---NDIPADVISYSS 292
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG----------------- 163
+I R ++ +A +++ +G PN Y + I C +G
Sbjct: 293 VIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVG 352
Query: 164 ------------------GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
GR+VEA L EM G+ P + ++ D G+ + A
Sbjct: 353 LVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAV 412
Query: 206 KI 207
K+
Sbjct: 413 KL 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V + + + A ++ +M G P + ++NS +G
Sbjct: 313 MRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGR 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + G + +Y + A +K G ++A +LL + G +P +
Sbjct: 373 WVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNS 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R Q++ A E+ G PN Y + I CGR R+ EA EM G
Sbjct: 433 AIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L+P ++ + D C K + E QL
Sbjct: 493 LSPNVVTYNSMIDA---CAKGEQWELAVQL 519
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 67/157 (42%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ A ++ +M QG P++ ++NS I+ K + +++ + +G V +Y
Sbjct: 304 KEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSA 363
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
A + G EA LL + G P Y + + GQ++ A + G
Sbjct: 364 TAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGS 423
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
P+ + + I CGRG ++ A L EM GLTP
Sbjct: 424 DPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTP 460
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 3/198 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++GF P R + ++ G A ++ +M+ D+ +++S+I + +
Sbjct: 245 EQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWK 304
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+++ + G +V +Y I A +K EA LL + G P Y
Sbjct: 305 EAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSAT 364
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G++ +A E+ +G PN Y + + C +GG++ +A L M+ +G
Sbjct: 365 AACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSD 424
Query: 183 PISRCFDLVTDGLKNCGK 200
P F+ D CG+
Sbjct: 425 PDIISFNSAIDA---CGR 439
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL++ ++ A+++ ++M + G DPD T++ +++ + KS +E +++ + G
Sbjct: 772 LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ M+DEA L + L+ +G +P P Y P++ G + G +DA
Sbjct: 832 YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ G PN +Y L+ G + M E G+ P + + +V D L
Sbjct: 892 ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P L+ GLL G +E A+ + ++M++ G +P+ +N L+ +G+ E
Sbjct: 865 EGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEK 924
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E++ S+ + G D+ +Y ++I + G +++ L + G P Y +I
Sbjct: 925 VCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIH 984
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ ++A +++++ KG PN Y +LI G+ G+ EA E+ G P
Sbjct: 985 GLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKP 1044
Query: 184 ISRCFDLVTDGLKNCG 199
++ + G G
Sbjct: 1045 NVFTYNALIRGYSVSG 1060
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L+Q L +AG L AK + KM PD T+ +L++ SG+
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++ ++ G +V +Y + A+ + G +DEA + + + G P Y
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F+ A F+ + I G PN + I G+ G ++A M G
Sbjct: 387 LISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKG 446
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V GL G+ +A+++
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+ + ++ GL+ + L+ A + +++ +G P T+ L++ + K G
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G + + Y IL+ AG ++ L ++VE G NP Y
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ +D +F ++ G P+ Y LI G+ GR EA + +M + G
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + L GK A K+
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKM 1033
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G NP ++ +++ L G L ++ G +PDL T+N LI + KSG
Sbjct: 932 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 991
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y + K G ++ TY LI + KAG EA ++ L+ G P Y
Sbjct: 992 LEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNA 1051
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I+G G ++AF + + + G PN Y L
Sbjct: 1052 LIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + ++ L AG LE A +++ KM ++G PD+ T LI+ +C +G
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + D TY L+ +G + + L DG+N Y
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G+ D+A F E+K KG P + Y +LI+ + RF A M G
Sbjct: 352 AVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411
Query: 181 LTP 183
TP
Sbjct: 412 PTP 414
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++L+ G AG E ++ M++QG +PD++++ +I+T+C G
Sbjct: 897 MLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGR 956
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + +G D+ TY +LI + K+G ++EA L +++ + G P Y
Sbjct: 957 LNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNS 1016
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I + G+ +A + E+ KG PN Y LI
Sbjct: 1017 LILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALI 1053
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL G L AK++ +++ G PD T+ +I+ K+
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + + DV LI + KAG +EA+++ + L E P Y
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + + PPN Y T++ + G A + L MT G
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 622 CMPDLSSYNTVMYGL 636
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ G L A A ++ N M G P+ T I KSGE
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G DV ++ ++K G + A R+ H L G +P Y
Sbjct: 432 SLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTM 491
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + D+A F+E+ P+ +LI M + GR EA E+ EM
Sbjct: 492 MIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMN 551
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ + GL GK
Sbjct: 552 LEPTDCTYNTLLAGLGREGK 571
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ +G+ A + M G P + T++ L+ K + E V + + G
Sbjct: 177 LIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARG 236
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y I I + +AG ++EA+R+L + E+G P +I+ G+ DA
Sbjct: 237 VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAK 296
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P+R Y TL+ CG G + + G + D L
Sbjct: 297 DVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDAL 356
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 357 CQVGRVDEA 365
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M +G PD+ N+++ + K+G + +++ + +G D TY ++I SKA
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
DEA ++ ++E+ P +I ++ G+ ++A+ F E+K P Y T
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
L+ GR G+ E L M P ++ V D L G+ + A
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYA 610
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ GL G ++ Q++ M P++ T+N++++ +CK+GEV + ++M YS+
Sbjct: 560 NTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTM 619
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+S+Y ++ + K +DEAF + + + P + I+ R G +
Sbjct: 620 NGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKE 678
Query: 134 AFCFFSE--IKIKGHPPNRPVYTTLITMCGRGG-----RFVE-AANYLMEMTEMGLTPIS 185
A E ++ V++ + + R G F E A+ + + ++ L+PI
Sbjct: 679 ALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPII 738
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
R + L H+L +K E L VSL++
Sbjct: 739 RHLCKHKEAL---AAHELVKKFENLGVSLKT 766
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+N V V L G ++ A + ++M ++G P ++NSLI K+
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E++ + G + T+ + I K+G +A + + G P ++ G
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ A F E+K G P+ YT +I C + EA EM E P
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + D L G+ + A KI
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKI 543
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ L AG A ++ ++ + +P T+N+L+ + + G+V+ +++
Sbjct: 519 PDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQL 578
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ TY ++ + K G ++ A +L+++ +G P S Y ++ G +
Sbjct: 579 LEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVK 638
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
+ D+AF F ++K K P+ T++ R G EA + + E
Sbjct: 639 EDRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVRE 685
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 88/210 (41%), Gaps = 6/210 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++++ A + A ++ +MI+ PD+ NSLI+ + K+G
Sbjct: 481 GISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEA 540
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++Y + ++ TY L+ + + G + E +LL + + P Y ++
Sbjct: 541 WKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDC 600
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP- 183
+ G+ + A + + G P+ Y T++ + R EA +M ++ L P
Sbjct: 601 LCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPD 659
Query: 184 -ISRCFDL---VTDGLKNCGKHDLAEKIEQ 209
+ C L V GL H + E I Q
Sbjct: 660 YATVCTILPSFVRSGLMKEALHTVREYILQ 689
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 76/198 (38%), Gaps = 2/198 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G+L E + + + G D + +I +CK E E+ LG
Sbjct: 702 LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLG 761
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+Y LI + +ID A L + G +P Y I+ + + +D
Sbjct: 762 VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 821
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG+ Y T+I+ + EA N ++ G +P + + DGL
Sbjct: 822 KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 881
Query: 196 KNCGKHDLAEKI--EQLE 211
G + AE + E LE
Sbjct: 882 LKDGNIEDAEALFDEMLE 899
>gi|255684868|gb|ACU27923.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684870|gb|ACU27924.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684872|gb|ACU27925.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684874|gb|ACU27926.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684876|gb|ACU27927.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684878|gb|ACU27928.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684880|gb|ACU27929.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684882|gb|ACU27930.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684884|gb|ACU27931.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684886|gb|ACU27932.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684888|gb|ACU27933.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684890|gb|ACU27934.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684892|gb|ACU27935.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684894|gb|ACU27936.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684896|gb|ACU27937.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684898|gb|ACU27938.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684908|gb|ACU27943.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684910|gb|ACU27944.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684914|gb|ACU27946.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684918|gb|ACU27948.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684922|gb|ACU27950.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684930|gb|ACU27954.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684932|gb|ACU27955.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684934|gb|ACU27956.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684936|gb|ACU27957.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684938|gb|ACU27958.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684940|gb|ACU27959.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684942|gb|ACU27960.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684944|gb|ACU27961.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684946|gb|ACU27962.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684948|gb|ACU27963.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684950|gb|ACU27964.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684952|gb|ACU27965.1| At1g03560-like protein [Arabidopsis thaliana]
Length = 193
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 5 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 64
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +DEA RL + E G Y
Sbjct: 65 VEEALD-YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 123
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + + D+A F + + +G YT LI+ + R EA M +
Sbjct: 124 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMID 183
Query: 179 MGLTPISRCF 188
G+TP + CF
Sbjct: 184 KGITPTAACF 193
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 1 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 61 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 120
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D K D A
Sbjct: 121 CYNALIDAFTKHRKVDEA 138
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+ N++ G P ++Y +I G + G +DA + +G P+ Y+ ++
Sbjct: 1 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 106
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 5/211 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P R +++++G + G LE A +++ KM G PD+ T+ LI+ CK G
Sbjct: 264 MFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGR 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ S+ + G + + Y IL+ + G + + LL ++ DG PF
Sbjct: 324 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI-PFEHRAFN 382
Query: 121 IIKGAF-RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ A+ + G D A F+E++ G P+ Y+T+I + + GR +A + +M
Sbjct: 383 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSE 442
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
GL+P F + GL + G+ +K+E+L
Sbjct: 443 GLSPNIISFTSLIHGLCSIGEW---KKVEEL 470
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 2 SDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
+D G+N P V ++ G G ++ A + ++MI QG PD+ T++SLI+ +CK+
Sbjct: 193 ADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQ 252
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ + + G + TY I+I G ++EA RLL + G P Y
Sbjct: 253 AMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYI 312
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ + G+ +A F + KG PN +Y L+ G ++ + L M
Sbjct: 313 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 372
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
G+ R F+++ G D A
Sbjct: 373 GIPFEHRAFNILICAYAKHGAVDKA 397
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + L+ GL + G + +++ +MI +G PD N++++ +CK G
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + V +G +V +Y LI G +DE+ + +V G P Y
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G F+ G+ +DA + E+ K ++ + GR V A M+M + G
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618
Query: 181 LTPISRCFDLVTDGL 195
++ V GL
Sbjct: 619 TQLRIETYNTVLGGL 633
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 7/214 (3%)
Query: 1 MSDKGFNPPVRGR---DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK 57
M+ G N R +L++ G L+ A +K G T N LI+ +C
Sbjct: 82 MARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCD 141
Query: 58 SGEVEFCVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG-HNPFP 115
+ ++M + + +LG DV +Y LI + EA LL ++ DG +N P
Sbjct: 142 GKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSP 201
Query: 116 SL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
++ Y+ II G F+ G+ D A+ F E+ +G PP+ Y++LI + +A L
Sbjct: 202 NVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAIL 261
Query: 174 MEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M + G+ P +R ++++ G + G+ + A ++
Sbjct: 262 QHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRL 295
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ GL AG + +A+++ KM+ +G+ +ET+N+++ +C++ V+ + M+ +
Sbjct: 592 NIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 651
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
DV T+ I+I A+ K G IDEA L +V G P Y+ +IK G ++
Sbjct: 652 KEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEE 711
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ F ++ G + + +I G A YL ++ E
Sbjct: 712 SDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDE 756
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
R ++L+ G ++ A +M + G PD+ +++++I +CK G VE V +
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ G ++ ++ LI + G + L ++ G +P I+ + G+
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
+A FF + G PN Y TLI G+ E+ M +GL P S ++
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Query: 191 VTDGLKNCGK 200
+ +G G+
Sbjct: 559 LLNGYFKNGR 568
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G G ++ + + ++M+ G PD T+N+L+ K+G VE
Sbjct: 513 GVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDA 572
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ +Y + + T I++ + +AG I A L +V+ G Y ++ G
Sbjct: 573 LALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 632
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
D+A F +++ K + + +I + GR EA + M G P
Sbjct: 633 LCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVP 691
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + + ++ GL ++ A +M + + + D+ TFN +I + K G
Sbjct: 614 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGR 673
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G V TY ++I + + G+++E+ L ++ ++G +
Sbjct: 674 IDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNV 733
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II+ +G A + ++I K LI
Sbjct: 734 IIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770
>gi|255684866|gb|ACU27922.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684900|gb|ACU27939.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684902|gb|ACU27940.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684904|gb|ACU27941.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684906|gb|ACU27942.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684912|gb|ACU27945.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684916|gb|ACU27947.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684920|gb|ACU27949.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684924|gb|ACU27951.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684926|gb|ACU27952.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684928|gb|ACU27953.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684954|gb|ACU27966.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684960|gb|ACU27969.1| At1g03560-like protein [Arabidopsis thaliana]
Length = 193
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 5 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 64
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +DEA RL + E G Y
Sbjct: 65 VEEALD-YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 123
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMT 177
+I + + D+A F ++ + ++ VYT I + G + R EA M
Sbjct: 124 ALIDAFTKHRKVDEAIALFKRME-EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI 182
Query: 178 EMGLTPISRCF 188
+ G+TP + CF
Sbjct: 183 DKGITPTAACF 193
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 1 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 61 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 120
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D K D A
Sbjct: 121 CYNALIDAFTKHRKVDEA 138
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+ N++ G P ++Y +I G + G +DA + +G P+ Y+ ++
Sbjct: 1 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 106
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++V AG E+A +V+ M+ +G P + T+NS+++ +C+SG + E+
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 187
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV ++ ILI + G I+EA ++ + G P ++ +I R
Sbjct: 188 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 247
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
RG+ D A + E++ G P+ +YT +I R G +A EM G P
Sbjct: 248 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 307
Query: 188 FDLVTDGL 195
++ + +GL
Sbjct: 308 YNTLLNGL 315
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ GL L A+ ++N+M ++G PDL TF +LI C G+++ +++
Sbjct: 303 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 362
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP--FPS--LYAPIIK 123
+ ++ D+ TY LI + + G +D+A ++L +D H+ FP+ Y+ +I
Sbjct: 363 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA----NDLWDDMHSREIFPNHVTYSILID 418
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+GQ +DAF F E+ KG PN Y ++I R G + +L +M ++P
Sbjct: 419 SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP 478
Query: 184 ISRCFDLVTDG-LKNCGKHDLAEKIEQLE 211
++ + G +K HD + + +E
Sbjct: 479 DLITYNTLIHGYIKEDKMHDAFKLLNMME 507
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + +++GL +G + A ++ +M G PD+ +F LI C+ GE
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++Y + G D+ ++ LI ++ G +D A L + G P +Y
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G DA E+ G P+ Y TL+ + R ++A L EM E G
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + G GK D A ++
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQL 362
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P VR +L+ G G +E A ++ +M +G PDL +F+ LI + G+
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D Y ++I +AG++ +A R+ +V G P Y
Sbjct: 251 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 310
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + DA +E++ +G PP+ +TTLI G+ +A M
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + DG+ G D A +
Sbjct: 371 LRPDIVTYNTLIDGMCRQGDLDKANDL 397
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + L+ G G L+ A Q+ + M+ Q PD+ T+N+LI+ +C+ G+
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + TY ILI + + G +++AF L ++ G P Y
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG R G F ++ + P+ Y TLI + + +A L M +
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Query: 181 LTPISRCFDLVTDGL 195
+ P ++++ +G
Sbjct: 511 VQPDVVTYNMLINGF 525
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++V A + ++++M K+ PD+ T N +++ ++G+ E + + S+
Sbjct: 99 NIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 158
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + TY ++ + ++GM D+A+ + + + G P + +I G R G+ ++
Sbjct: 159 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE 218
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + E++ +G P+ ++ LI + R G+ A YL EM GL P + +V
Sbjct: 219 ALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIG 278
Query: 194 GLKNCG 199
G G
Sbjct: 279 GFCRAG 284
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ G AG + A ++ ++M+ G PD+ T+N+L+ +CK + + + +
Sbjct: 275 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+ T+ LI G +D+A +L ++ P Y +I G R+G D A
Sbjct: 335 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 394
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ ++ + PN Y+ LI G+ +A +L EM G+ P ++ + G
Sbjct: 395 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 454
Query: 195 LKNCGKHDLAEKIEQ 209
G +K Q
Sbjct: 455 YCRSGNVSKGQKFLQ 469
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ G +E A +++MI +G P++ T+NS+I+ C+SG V + +
Sbjct: 415 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 474
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
D+ TY LI K + +AF+LL+ + ++ P Y +I G G +A
Sbjct: 475 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 534
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
F ++ KG P+R Y ++I G EA EM + G
Sbjct: 535 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG+ A + S+ + T N ++ CK+ E + + + K DV T
Sbjct: 73 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 132
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ +++ A +AG + A L+ ++V G P Y ++KG R G +D A+ F E+
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 192
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
G P+ +T LI R G EA EM G+ P F + GK D
Sbjct: 193 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 252
Query: 203 LA 204
A
Sbjct: 253 HA 254
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + + +++G +G + ++ + KM+ PDL T+N+LI K +
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K DV TY +LI S G + EA + + G P Y
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+I G G +AF E+ +G R T
Sbjct: 556 MINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTV 590
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + + L+ G+ G L+ A + + M + P+ T++ LI++ C+ G+
Sbjct: 366 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 425
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + G ++ TY +I ++G + + + L ++ + +P Y
Sbjct: 426 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 485
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DAF + ++ + P+ Y LI G EA +M G
Sbjct: 486 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 545
Query: 181 LTP 183
+ P
Sbjct: 546 IEP 548
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ E ++++ +M ++G + D+ T+N+LI+ +CK G+
Sbjct: 296 MQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQ 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + S+ +V TY +I K G +EA L H++ E G P Y
Sbjct: 356 MELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNT 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+FDDA +++ G + Y LI G+ G++ +AA +M G
Sbjct: 416 LIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEG 475
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + D G H A I
Sbjct: 476 LVPNVLTYSALIDAYSKAGMHQDATSI 502
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P V ++ G G E A + + M + G PD ++N+LI+ K G
Sbjct: 366 MRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGR 425
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + ++G ADV TY LI A K G +A L + +G P Y+
Sbjct: 426 FDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSA 485
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G DA F E K G P+ +Y++LI C + G +A L EMT+ G
Sbjct: 486 LIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 545
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P ++ + D G+ D E
Sbjct: 546 IQPNIVTYNSLIDAYGRNGQVDNVE 570
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L+ A + +M K+G +PD TFNSLI + E ++ + + G D+ TY
Sbjct: 286 LKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNT 345
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI AV K G ++ A ++ ++ +P Y+ +I G + G F++A + ++K G
Sbjct: 346 LIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESG 405
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
P+R Y TLI + + GRF +A +M +GL ++ + D GK+
Sbjct: 406 VRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKY 461
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + + L+ + G +E A +++ M + P++ T++++I+ K G
Sbjct: 331 MQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGC 390
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +Y+ + + G D +Y LI +K G D+A ++ G Y
Sbjct: 391 FEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNA 450
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G++ DA F ++K +G PN Y+ LI + G +A + +E G
Sbjct: 451 LIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAG 510
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P + + D CG
Sbjct: 511 LKPDVVLYSSLIDSCCKCG 529
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNS-LIETICKSGEVEFCVEMYYSVCK 73
L++ L N G E A Q M++QG + S +I T+ + G+VE ++++ K
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 227
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG-QFD 132
G +V Y ++ A ++G EA ++ + + G P Y II + G
Sbjct: 228 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLK 287
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F E++ +G P+R + +LI +C RG + ++ EM G+ ++ +
Sbjct: 288 KALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLI 347
Query: 193 DGLKNCGKHDLAEKI 207
D + G+ +LA I
Sbjct: 348 DAVCKGGQMELAASI 362
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG-EVEF 63
GF V +V +G A ++ M K G P+L T+N++I+ K G +++
Sbjct: 229 GFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKK 288
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++ + K G D T+ LI S+ + +++ R+ + G Y +I
Sbjct: 289 ALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLID 348
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ GQ + A S +++K PN Y+T+I G+ G F EA +M E G+ P
Sbjct: 349 AVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRP 408
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
++ + D G+ D A
Sbjct: 409 DRVSYNTLIDIYAKLGRFDDA 429
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 2/172 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G + A M + G D+ T+N+LI+ K G+
Sbjct: 401 MKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGK 460
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +V TY LI A SKAGM +A + G P LY+
Sbjct: 461 YKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSS 520
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF--VEAA 170
+I + G +DA E+ G PN Y +LI GR G+ VEAA
Sbjct: 521 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAA 572
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ L G +E A + N+ K G ++ +++++ +SG ++++ ++ K
Sbjct: 204 IMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKA 263
Query: 75 GSCADVSTYKILIPAVSKAGM-IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ TY +I A K G+ + +A + + ++G P + +I R ++D
Sbjct: 264 GCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWED 323
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+ F+E++ +G + Y TLI +GG+ AA+ + M ++P + + D
Sbjct: 324 SQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMID 383
Query: 194 GLKNCG 199
G G
Sbjct: 384 GYGKLG 389
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 7/183 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ AG + A + + + G PD+ ++SLI++ CK G
Sbjct: 471 MKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGL 530
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE V + + + G ++ TY LI A + G +D N+ + N
Sbjct: 531 VEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTE 590
Query: 121 IIKGAFRRGQFDD-------AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
II Q + A F E++ G PN ++ ++ C R EA+ L
Sbjct: 591 IICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLL 650
Query: 174 MEM 176
+M
Sbjct: 651 EQM 653
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST--YKILIPAVSKAGMIDEAFRL 102
LE F L+ + GE E ++ Y + + G + I+I + + G ++ A +
Sbjct: 162 LEDFPYLLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDV 221
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ + G Y+ ++ R G+ +A F +K G PN Y T+I CG+
Sbjct: 222 FNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGK 281
Query: 163 GG-RFVEAANYLMEMTEMGLTPISRCFD 189
GG +A + EM + G+ P F+
Sbjct: 282 GGVDLKKALDIFEEMQKEGVEPDRITFN 309
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V +LV G G L A ++N+M+ + +PD+ T+ L++ +CK G+
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGK 283
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + K DV Y L+ ++ A R+ + + + G P Y+
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A F EI K P+ YT+LI + GR + EM + G
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + D L G D A
Sbjct: 404 QPPDVITYNNLIDALCKNGHLDRA 427
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V +++ GL ++ A + ++ ++ PD T+ SLI+ +CKSG
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G DV TY LI A+ K G +D A L + + + P +
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A FF ++ KG+ N YT +I + G EA M + G
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ F+++ + ++D AEK+
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKL 535
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V + L+ L G+L+ A + NKM Q P++ TF L++ +CK G
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGR 458
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + + G C +V TY ++I + K G++DEA L + ++G +
Sbjct: 459 LKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEI 518
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+ F + + D A E+ +G
Sbjct: 519 MIRAFFDKDENDKAEKLVREMIARG 543
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 14 DLLVQGLLNAGY-----LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
D++V L GY + +AK++ M + G PD+ ++ +I +CK V+ + ++
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLF 361
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ + D TY LI + K+G I + L +++ G P Y +I +
Sbjct: 362 EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
G D A F+++K + PN +T L+ + GR A + ++ G R +
Sbjct: 422 GHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTY 481
Query: 189 DLVTDGLKNCGKHDLAEKIEQ 209
++ +GL G D A ++
Sbjct: 482 TVMINGLCKEGLLDEALALQS 502
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 39/244 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L++GL G ++ A + +K++ QG ++ LI +CK GE
Sbjct: 123 GYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAA 182
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + +V Y ++I + K ++DEA+ L +V G +P Y+ ++ G
Sbjct: 183 IRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSG 242
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL----------- 173
GQ + A +E+ ++ P+ YT L+ + G+ EA N L
Sbjct: 243 FCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLD 302
Query: 174 ------------------------MEMTEMGLTPISRCFDLVTDGLKNCGKHD----LAE 205
MT+MG+TP C+ ++ +GL + D L E
Sbjct: 303 VVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFE 362
Query: 206 KIEQ 209
+I Q
Sbjct: 363 EIHQ 366
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ + G + A V+K++K G P+ T N+L++ +C G+V+ + + V
Sbjct: 97 NIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLA 156
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +Y ILI V K G A RLL + P +Y+ II + D+
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDE 216
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ ++E+ KG P+ Y+ L++ G+ A + L EM + P + ++ D
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276
Query: 194 GLKNCGKHDLAEKI 207
L GK AE +
Sbjct: 277 ALCKEGKVKEAENV 290
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 71/186 (38%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
L+N +A + +M +PD T N +I C G+V + KLG
Sbjct: 67 SLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQP 126
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
+ T L+ + G + EA R ++ G Y +I G + G+ A
Sbjct: 127 NTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLL 186
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
I+ PN +Y+ +I + EA + EM G++P + ++ G
Sbjct: 187 RRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIV 246
Query: 199 GKHDLA 204
G+ + A
Sbjct: 247 GQLNRA 252
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G ++ A + +M +Q P+ T+N+LI +C G ++ + +++ +
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY+ L + K +D+A LL + +P +Y I+ G R G+ +D
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 473
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A FS + KG PN Y +I + G EA+ EM + G +P ++L+T
Sbjct: 474 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533
Query: 194 G-LKNCGKHDLAEKIEQLE 211
G L+N ++ IE LE
Sbjct: 534 GFLRN---NEALRTIELLE 549
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P V + +V L G + A +V+ MI +G +P++ T+N+L++ C E
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V+++ ++ A+V +Y LI K +D+A L + P Y
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ DA F E+ +G P+ Y TL + +A L +
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + DG+ G+
Sbjct: 451 WDPDIQIYTTILDGMCRAGE 470
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +++ L + ++ A + K++K G PD TF +LI +C G+
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K G A RLL ++ + P +++
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + Q +AF FSE+ KG PN Y +LI + + + EM +
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 181 LTPISRCFDLVTDGL 195
+ P + V D L
Sbjct: 276 IMPDVFTLNTVVDAL 290
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS + P + L+ GL + G L+ A + ++M+ +G PDL T+ +L + +CK+
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ D+ Y ++ + +AG +++A L NL G P Y
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A FSE+ G PN Y + R + L EM G
Sbjct: 496 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555
Query: 181 LT 182
+
Sbjct: 556 FS 557
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L++GL G + A + +KMI +G P++ T+ +LI +CK G
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + S+ + G+C +V + LI ++ K + EAF + ++ G +P Y +I
Sbjct: 195 IRLLRSM-EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + ++ +E+ P+ T++ + G EA + + M G+ P
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++ + DG + D+A K+
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKV 337
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + + L+ GL + ++N+M+ PD+ T N++++ +CK G
Sbjct: 236 MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM 295
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G +V TY L+ +D A ++ +V Y
Sbjct: 296 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 355
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D A F E+ + PN Y TLI GR +A + EM G
Sbjct: 356 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415
Query: 181 LTPISRCFDLVT 192
P DLVT
Sbjct: 416 QIP-----DLVT 422
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V L+ L + A + ++MI +G P++ T+NSLI +CK E
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV T ++ A+ K GM+ EA ++ ++ G P Y
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + D A F + K N Y TLI + +A EM+
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 181 LTPISRCFDLVTDGLKNCGK 200
LTP + ++ + GL + G+
Sbjct: 381 LTPNTVTYNTLIHGLCHVGR 400
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
L+ L+ A N+M+ + P FN L+ +I K+ + + + G DV
Sbjct: 46 LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV 105
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T I+I ++ +D AF L +++ GH P + + +I+G G+ +A F +
Sbjct: 106 YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 165
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + G A L M + P F + D L
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSL 220
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P V ++++ GL G L A ++ ++M K G P+ T+N + ++ E
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
+E+ + G DVST +L+ +S G+ ++L V+
Sbjct: 541 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +G +P + ++LV G G A ++V +M ++G P T+ LI+T +S
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ S+ +LG DV TY +LI G ++EA RL ++VE P +Y
Sbjct: 424 MEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNT 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G A F E++ K PPN Y +I + + + EA + +M + G
Sbjct: 484 MVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSG 543
Query: 181 LTPISRCFDLVT 192
+ P +L++
Sbjct: 544 IGPSDSILNLIS 555
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++G AG +E + ++ ++ + G P++ + +LI+ CK GE+E ++++ + K
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKF 227
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G A+ TY +LI + K G+ + F + + E G P Y ++ + G+ DA
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDA 287
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F F E++ +G N Y TLI R + EA + +M G+ P ++ + DG
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDG 347
Query: 195 LKNCGKHDLAEKI 207
CG L + +
Sbjct: 348 F--CGVRKLGKAL 358
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL G + +M KM + G P+L T+N ++ +CK G + +++ + +
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRER 297
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G ++ TY LI + + +EA ++ + DG NP Y +I G + A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKA 357
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
++K +G P+ Y L++ + G A + EM E G+ P + ++ D
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDT 417
Query: 195 LKNCGKHDLAEKIEQLEVSLRSV 217
+ D EK QL S+ +
Sbjct: 418 F---ARSDNMEKAIQLRSSMEEL 437
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE--FCVEMY 68
R ++++ + + L+S+ N+M+ +G P FN+L+ + S +C +
Sbjct: 95 RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC---F 151
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
++ K+ DV ++ I+I +AG I+++F LL L E G +P +Y +I G ++
Sbjct: 152 FNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKK 211
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
G+ + A F E+ G N YT LI + G + +M E G+ P +
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTY 271
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ V + L G+ A K+
Sbjct: 272 NCVMNQLCKDGRTKDAFKV 290
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + ++ L G + A ++ ++M ++G ++ T+N+LI +C+ +
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + G ++ TY LI + +A L +L G +P Y
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G A E++ +G P++ YT LI R +A M E+G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP + ++ G G+ + A ++
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRL 465
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G + + + L+ GL A +++++M G +P+L T+N+LI+ C +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRK 353
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + TY IL+ K G A +++ + E G P Y
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R + A S ++ G P+ Y+ LI GR EA+ M E
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473
Query: 181 LTP 183
P
Sbjct: 474 FEP 476
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKGF P + L+ ++ + N+ K D+ +F +I+ C++GE
Sbjct: 120 MVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES-KIKVVLDVYSFGIVIKGCCEAGE 178
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G +V Y LI K G I++A L + + G Y
Sbjct: 179 IEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTV 238
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G F + +++ G PN Y ++ + GR +A EM E G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298
Query: 181 LTPISRCFDLVTDGL 195
++ ++ + GL
Sbjct: 299 VSCNIVTYNTLIGGL 313
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 35/164 (21%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y+++I A ++ +D + + +V+ G P + + ++ F+ +CFF+E K
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 143 IK----------------------------------GHPPNRPVYTTLITMCGRGGRFVE 168
IK G PN +YTTLI C + G +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGL-KNCGKHDLAEKIEQLE 211
A + EM + GL + ++ GL KN K E E+++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ 260
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G ++ A + +M +Q P+ T+N+LI +C G ++ + +++ +
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY+ L + K +D+A LL + +P +Y I+ G R G+ +D
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 473
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A FS + KG PN Y +I + G EA+ EM + G +P ++L+T
Sbjct: 474 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533
Query: 194 G-LKNCGKHDLAEKIEQLE 211
G L+N ++ IE LE
Sbjct: 534 GFLRN---NEALRTIELLE 549
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P V + +V L G + A +V+ MI +G +P++ T+N+L++ C E
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V+++ ++ A+V +Y LI K +D+A L + P Y
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ DA F E+ +G P+ Y TL + +A L +
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + DG+ G+
Sbjct: 451 WDPDIQIYTTILDGMCRAGE 470
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +++ L + ++ A + K++K G PD TF +LI +C G+
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K G A RLL ++ + P +++
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + Q +AF FSE+ KG PN Y +LI + + + EM +
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 181 LTPISRCFDLVTDGL 195
+ P + V D L
Sbjct: 276 IMPDVFTLNTVVDAL 290
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS + P + L+ GL + G L+ A + ++M+ +G PDL T+ +L + +CK+
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ D+ Y ++ + +AG +++A L NL G P Y
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A FSE+ G PN Y + R + L EM G
Sbjct: 496 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555
Query: 181 LT 182
+
Sbjct: 556 FS 557
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L++GL G + A + +KMI +G P++ T+ +LI +CK G
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + S+ + G+C +V + LI ++ K + EAF + ++ G +P Y +I
Sbjct: 195 IRLLRSM-EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + ++ +E+ P+ T++ + G EA + + M G+ P
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++ + DG + D+A K+
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKV 337
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + + L+ GL + ++N+M+ PD+ T N++++ +CK G
Sbjct: 236 MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM 295
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ + G +V TY L+ +D A ++ +V Y
Sbjct: 296 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 355
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D A F E+ + PN Y TLI GR +A + EM G
Sbjct: 356 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415
Query: 181 LTPISRCFDLVT 192
P DLVT
Sbjct: 416 QIP-----DLVT 422
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V L+ L + A + ++MI +G P++ T+NSLI +CK E
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV T ++ A+ K GM+ EA ++ ++ G P Y
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEM 179
++ G R + D A F + K N Y TLI + + V+ A YL EM+
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK-IQSVDKAMYLFEEMSRQ 379
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
LTP + ++ + GL + G+
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGR 400
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
L+ L+ A N+M+ + P FN L+ +I K+ + + + G DV
Sbjct: 46 LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV 105
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T I+I ++ +D AF L +++ GH P + + +I+G G+ +A F +
Sbjct: 106 YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 165
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + G A L M + P F + D L
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSL 220
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P V ++++ GL G L A ++ ++M K G P+ T+N + ++ E
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+E+ + G DVST +L+ +S G+ ++L +V
Sbjct: 541 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D P V + L+ GL A LE A ++V +M + D T+ +L++ +CK G
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + + G V TY L+ A KAG + +A +++ ++V G P + Y ++
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+G F G+ A FF +I + PP VY+ L+ C + EA Y +EM + L
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLA 419
Query: 183 PISRCFDLVTDGLKNCGKHD 202
P L+ + L G+ D
Sbjct: 420 PDPATCKLLVEMLCKRGRTD 439
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMI-KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+ +G A ++ A Q++ M+ K+ + PD+ +N +I CK+G V EM ++ +
Sbjct: 145 VARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSM 204
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFD 132
G + TY LI K+G + EA +L L H+ P++ + +I G + + +
Sbjct: 205 GCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLE 264
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
AF ++K + + YTTL+ + GR E + EM G P
Sbjct: 265 HAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNP 315
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP V LV AG L+ A+Q++ M+ +G PD+ T+ L+E + ++G+
Sbjct: 308 MLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGK 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E + + + Y L+ KA ++DEA + +++ P P+
Sbjct: 368 VRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKL 427
Query: 121 IIKGAFRRGQFD 132
+++ +RG+ D
Sbjct: 428 LVEMLCKRGRTD 439
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 42/234 (17%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL AG L A + N+M+++ P+L N L+ ++C++G ++ + ++ +
Sbjct: 8 VLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI--- 64
Query: 75 GSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPIIKGAFRRGQFD 132
C+ V T ILI + ++D+A L H + ++ P + Y IIK + + D
Sbjct: 65 -QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLD 123
Query: 133 DA-----------------------FC-----------FFSEIKIKGHPPNRPVYTTLIT 158
A FC ++ K P+ + +I
Sbjct: 124 QARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIH 183
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ GR EA L + MG P + + + DG C +L+E ++ +V
Sbjct: 184 GFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGF--CKSGNLSEALQLFKV 235
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D P V + L+ GL A LE A ++V +M + D T+ +L++ +CK G
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + + G V TY L+ A KAG + +A +++ ++V G P + Y ++
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+G F G+ A FF +I + PP VY+ L+ C + EA Y +EM + L
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLA 419
Query: 183 PISRCFDLVTDGLKNCGKHD 202
P L+ + L G+ D
Sbjct: 420 PDPATCKLLVEMLCKRGRTD 439
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMI-KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+ +G A ++ A Q++ M+ K+ + PD+ +N +I CK+G V EM ++ +
Sbjct: 145 VARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSM 204
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFD 132
G + TY LI K+G + EA +L L H+ P++ + +I G + + +
Sbjct: 205 GCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLE 264
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
AF ++K + + YTTL+ + GR E + EM G P
Sbjct: 265 HAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNP 315
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP V LV AG L+ A+Q++ M+ +G PD+ T+ L+E + ++G+
Sbjct: 308 MLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGK 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E + + + Y L+ KA ++DEA + +++ P P+
Sbjct: 368 VRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKL 427
Query: 121 IIKGAFRRGQFD 132
+++ +RG+ D
Sbjct: 428 LVEMLCKRGRTD 439
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 42/234 (17%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL AG L A + N+M+++ P+L N L+ ++C++G+++ + ++ +
Sbjct: 8 VLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI--- 64
Query: 75 GSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPIIKGAFRRGQFD 132
C+ V T ILI + ++D+A L H + ++ P + Y IIK + + D
Sbjct: 65 -QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLD 123
Query: 133 DA-----------------------FC-----------FFSEIKIKGHPPNRPVYTTLIT 158
A FC ++ K P+ + +I
Sbjct: 124 QARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIH 183
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ GR EA L + MG P + + + DG C +L+E ++ +V
Sbjct: 184 GFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGF--CKSGNLSEALQLFKV 235
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +G +P + ++LV G G A +MV +M ++G P T+ LI+T +S
Sbjct: 364 LKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ S+ +LG DV TY +LI G ++EA RL ++VE P +Y
Sbjct: 424 METAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNT 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A F +++ K PN Y+ LI + + + EA + + +M + G
Sbjct: 484 MILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSG 543
Query: 181 LTPISRCFDLVT 192
+ P +L++
Sbjct: 544 IDPSDTICNLIS 555
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++G AG +E + ++ ++ + G P++ + +LI+ CK GE+E ++++ + K
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKF 227
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP--IIKGAFRRGQFD 132
G A+ TY +LI + K G+ + F + + E H FP+LY ++ + G+
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQE--HGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DAF F E++ +G N Y TLI R + EA + +M + P ++ +
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLI 345
Query: 193 DGLKNCGK 200
DG + GK
Sbjct: 346 DGFCSVGK 353
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL G + +M KM + G P+L T+N ++ +CK G + +++ + +
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRER 297
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G ++ TY LI + + +EA +++ + NP Y +I G G+ A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKA 357
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
++K +G P+ Y L++ R G AA + EM E G+ P + ++ D
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 195 LKNCGKHDLAEKIEQLEVSLRSV 217
+ D E QL S+ +
Sbjct: 418 F---ARSDNMETAIQLRSSMEEL 437
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
NP + + L+ G + G L A + + +G P L T+N L+ C+ G+ +
Sbjct: 335 NPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAK 394
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
M + + G TY ILI +++ ++ A +L ++ E G P Y+ +I G
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFC 454
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+GQ ++A F + K PN +Y T+I + G A +M E L P
Sbjct: 455 IKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAP 511
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE--FCVEMY 68
R ++++ + + L+S+ N+M+ +G P FN+L+ + S +C +
Sbjct: 95 RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC---F 151
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
++ K+ DV ++ I+I +AG I+++F LL L E G +P +Y +I G ++
Sbjct: 152 FNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKK 211
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
G+ + A F E+ G N YT LI + G + +M E G+ P +
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTY 271
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ V + L G+ A K+
Sbjct: 272 NCVMNQLCKDGRTKDAFKV 290
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G + + + L+ GL A +++++M +P+L T+N+LI+ C G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGK 353
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G + TY +L+ + G A +++ + E G P Y
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R + A S ++ G P+ Y+ LI G+ EA+ M E
Sbjct: 414 LIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKM 473
Query: 181 LTP 183
L P
Sbjct: 474 LEP 476
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKGF P + L+ ++ + N+ K D+ +F +I+ C++GE
Sbjct: 120 MVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES-KIKVVLDVYSFGIVIKGCCEAGE 178
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G +V Y LI K G I++A L + + G Y
Sbjct: 179 IEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTV 238
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G F + +++ G PN Y ++ + GR +A EM E G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ ++ + GL K + A K+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANKV 325
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 35/164 (21%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y+++I A ++ +D + + +V+ G P + + ++ F+ +CFF+E K
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 143 IK----------------------------------GHPPNRPVYTTLITMCGRGGRFVE 168
IK G PN +YTTLI C + G +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGL-KNCGKHDLAEKIEQLE 211
A + EM + GL + ++ GL KN K E E+++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ 260
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + + GL G LE A ++ KM++ G P+ T+N+LI+ C G+
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G A + TY + I A+ G + +A ++ + E G P +
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF E+ KG P YT+LI + G+ R EA ++ + G
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456
Query: 181 LTPISRCFDLVTDG 194
L P F+ + DG
Sbjct: 457 LLPDIIVFNALIDG 470
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ L G L+ AK+ + M G P++ T+N++I C G+ + ++ ++
Sbjct: 220 NIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKD 279
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY I + K G ++EA L+ ++E G P Y +I G +G D
Sbjct: 280 KGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDK 339
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ + E+ KG + Y I GR +A N + EM E G+ P + +++ +
Sbjct: 340 AYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILIN 399
Query: 194 GLKNCG 199
G CG
Sbjct: 400 GYCRCG 405
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P ++L+ G G + A ++++M+ +G P L T+ SLI + K
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G D+ + LI G ID AF+LL + P Y
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ ++A E+K +G P+ Y TLI+ + G +A EM G
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P ++ + GL + + AE++ + VS
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVS 594
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ L ++ A + +K+ ++G PD+ FN+LI+ C +G
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + D TY L+ + G ++EA +LL + G P Y
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +RG DAF E+ G P Y LI + A L EM G
Sbjct: 537 LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596
Query: 181 LTP 183
+TP
Sbjct: 597 ITP 599
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLLV+ A + + ++G P++ET N ++ K + +Y + +
Sbjct: 150 DLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFR 209
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ + + T+ I+I + K G + +A + ++ G P Y II G RG+F
Sbjct: 210 MNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQR 269
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F +K KG P+ Y + I+ + GR EA+ + +M E GL P + ++ + D
Sbjct: 270 ARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALID 329
Query: 194 GLKNCGKHDLA 204
G N G D A
Sbjct: 330 GYCNKGDLDKA 340
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + +L + L G + A M+ +M ++G PD T N LI C+ G+
Sbjct: 347 MISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD 406
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G + TY LI + K + EA L + ++G P ++
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNA 466
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G D AF E+ P+ Y TL+ R G+ EA L EM G
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P ++ + G G
Sbjct: 527 IKPDHISYNTLISGYSKRG 545
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G N G L+ A ++MI +G L T+N I + G
Sbjct: 312 MLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGR 371
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M + + G D T+ ILI + G AF LL +V G P Y
Sbjct: 372 MGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTS 431
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +R + +A FS+I+ +G P+ V+ LI G A L EM M
Sbjct: 432 LIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMK 491
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G GK + A ++
Sbjct: 492 VLPDEITYNTLMQGYCREGKVEEARQL 518
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +G P + + L+ G G ++ A Q++ +M PD T+N+L++ C+ G+
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK 511
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ + + G D +Y LI SK G + +AFR+ ++ G +P Y
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNA 571
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I+G + + + A E+ KG P+ Y ++I
Sbjct: 572 LIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+QG G +E A+Q++++M ++G PD ++N+LI K G+++ + +
Sbjct: 500 NTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMT 559
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
G + TY LI + K + A LL +V G P S Y II+
Sbjct: 560 TGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G G ++ A ++ ++M+ G DP + T+N+LI+ +CK+ E
Sbjct: 522 MKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQE 581
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
E E+ + G D STY +I A+
Sbjct: 582 GEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 192 MRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 251
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY L+ + K G +++A L+ + G P Y
Sbjct: 252 VDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTT 311
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR +A L EM +G
Sbjct: 312 LIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVG 371
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 372 LKPDTGTYTMIINEF--CKKGDVWK 394
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK
Sbjct: 157 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESX 216
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 217 MDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNT 276
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G + A E+ KG P++ YTTLI C + G A + M +
Sbjct: 277 LVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQEN 336
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 337 IRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLK 373
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 102 VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWG 161
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL + G P Y+ +I G + DDA
Sbjct: 162 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDAN 221
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 222 ELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGL 281
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 282 --CKKGDLNQ 289
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDJ T+N+L+ +CK G++
Sbjct: 230 KGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQ 289
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 290 AHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALIS 349
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 350 GLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 409
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 410 XVVTYNVLMNG 420
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A + + + K G P + ++N+L+ + G+++ + ++
Sbjct: 135 NILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRA 194
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++ G P + +I G + G+ D
Sbjct: 195 SGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDL 254
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TL+ + G +A + EM GL P + + D
Sbjct: 255 AMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLID 314
Query: 194 GLKNCGKHDLAEKIEQ 209
G C + DL E
Sbjct: 315 GC--CKEGDLDAAFEH 328
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 67 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 126
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 127 YPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 186
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S ++ G P+ Y+ LI + +A EM GL P F + DG
Sbjct: 187 RLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGH 246
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 247 CKNGRVDLAMEIYKQMLS 264
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 297 MXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 356
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + +GH P Y
Sbjct: 357 SXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNV 416
Query: 121 IIKG 124
++ G
Sbjct: 417 LMNG 420
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G +++A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A + EM +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + + C K D+ +
Sbjct: 383 LKPDTGTYTMIINEV--CKKGDVGK 405
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G + A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLK 384
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + + ++ G L FN L CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE F+L + G P Y+ +I G + + D A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLNQ 300
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G++
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 AHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ ++ G DV TY +LI + K +D A L ++ G P + +I G
Sbjct: 197 FKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KITYTTLIDGC--CKEGDLDTAFEH 339
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L A ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A +++ ++ G P Y
Sbjct: 333 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLM 429
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I V K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 75/198 (37%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 78 LITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWGFYEEFLECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + A EM GL P F + DG
Sbjct: 198 KLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 36/232 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ A YL A ++ N+M K G +PD T+ +LI+ K+G
Sbjct: 364 MVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGF 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG-----------MIDE----------- 98
+ F +EMY + G D TY ++I + KAG MI++
Sbjct: 424 LNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNI 483
Query: 99 -------------AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
A +L ++ G P Y+ +++ G D+A FSE+K K
Sbjct: 484 MIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKN 543
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLVTDGLK 196
P+ PVY L+ + G+ G +A + M GL P + C L++ L+
Sbjct: 544 WVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLR 595
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +++ L AG+L +A ++ +MI+QG P+L T+N +I K+
Sbjct: 434 MQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARN 493
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++Y + G D TY I++ + +G +DEA + + P +Y
Sbjct: 494 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGL 553
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G + A+ ++ + G PN P +L++ R R +A N L M +G
Sbjct: 554 LVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLG 613
Query: 181 LTPISRCFDLV 191
L P + + L+
Sbjct: 614 LNPSLQTYTLL 624
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P ++++ L ++GYL+ A+ + ++M ++ PD + L++ K+G
Sbjct: 504 MQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGN 563
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E Y ++ G C +V T L+ A + + +A+ LL +++ G NP Y
Sbjct: 564 VEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTL 623
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
++ D C+ + + GHP +
Sbjct: 624 LLSCCTEARSPYDMGCYCELMSVTGHPAH 652
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
D TY ++ + +A +LL +V DG P Y +I R +DA F
Sbjct: 337 DGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVF 396
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
++++ G P+R Y TLI + + G A M GL+P + + ++ + L
Sbjct: 397 NQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKA 456
Query: 199 GKHDLAEKI 207
G A+K+
Sbjct: 457 GHLAAADKL 465
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL A + A ++++ M+ G +P+ +++LI+ CK G+++ E+
Sbjct: 606 PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV 665
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K G V TY LI + K G +D A ++L ++ D NP Y +I G +
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSK 725
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ + A S ++ KG PN YT LI G+ G+ + +M G P
Sbjct: 726 VGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAP 781
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D L+ G G +++A+++ +M K G P + T+ SLI+ + K G
Sbjct: 634 MLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR 693
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + +V TY +I +SK G I++A LL + E G +P Y
Sbjct: 694 LDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTA 753
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + G+ D + F ++ KG PN Y LI C G EA L EM
Sbjct: 754 LIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-----------QGSD-----PD 44
M D P L+ GL AG ++ A ++ K+I +G+D P+
Sbjct: 548 MVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPN 607
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+ T+ +LI+ +CK+ +V E+ ++ G + Y LI K G ID A +
Sbjct: 608 VVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ + G+ P Y +I F+ G+ D A SE+ PN YT +I + G
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+A N L M E G +P + + DGL GK D + K+
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKL 770
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G+ P V L+ + G L+ A +++++M+ +P++ T+ ++I+ + K GE
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G +V TY LI + K G D + +L + G P Y
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D+A E+K P + Y + G +F+ + L EM
Sbjct: 789 LINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQ--GFSKKFIASLGLLEEMESHE 846
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVS 213
PI+ + ++ D G+ + A ++ E +EVS
Sbjct: 847 TVPIAPVYGMLIDSFSKAGRLETALELHKELVEVS 881
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++ L A +E + + +M + G +PD+ T+ LI++ CK+G
Sbjct: 443 MMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGL 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + +G +V TY L+ A K+ + +A + H +V+ P Y+
Sbjct: 503 IEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSA 562
Query: 121 IIKGAFRRGQFDDAFCFF-----------SEIKIKGH-----PPNRPVYTTLITMCGRGG 164
+I G + G+ A + S+ +G+ PN Y LI +
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +A L M G P +D + DG GK D A+++
Sbjct: 623 KVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV 665
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC---- 56
M +G NP + LV G NAG A ++ N+M GS P +N I +IC
Sbjct: 332 MMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEE 391
Query: 57 -KSGEVEFCVEMYYSVCKLGSCA--DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
+ E+ VE Y SC V+T + G ++AF++L ++ G P
Sbjct: 392 LPNAELLDLVEKVYEEMLAASCVLNKVNTAN-FSRCLCGVGKFEKAFQILKEMMRKGFVP 450
Query: 114 FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
S Y +I + + + +F F E+K G P+ YT LI + G +A ++
Sbjct: 451 DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWF 510
Query: 174 MEMTEMGLTP 183
EM +G +P
Sbjct: 511 DEMRSVGCSP 520
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G E A Q++ +M+++G PD T+ +I +C++ +VE ++ + + G D
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V TY ILI + KAG+I++A + G +P Y ++ + Q A F
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+ PN Y+ LI + G +A
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKA 576
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 3/197 (1%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
R ++LV+ G + A + + ++ G P T+N+L++ + +G+VE +
Sbjct: 170 RLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKE 229
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ G C D ST A+ K G +A +L ++ N L +I G
Sbjct: 230 MSASGFCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASL 286
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
F++A F ++ PN Y TL++ + +F + M G P F+
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346
Query: 191 VTDGLKNCGKHDLAEKI 207
+ G N G + A K+
Sbjct: 347 LVHGYCNAGDYAYAYKL 363
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 77/195 (39%), Gaps = 33/195 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
+ D G+ P + LVQ L +AG +E ++ +M G D T + +CK G
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGR 254
Query: 60 ---------------EVEFCVEM---------------YYSVCKLGSCA-DVSTYKILIP 88
+ C +M + + SC +V TY+ L+
Sbjct: 255 WADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLS 314
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
K R+++ ++ +G NP PSL+ ++ G G + A+ F+ + G PP
Sbjct: 315 GFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPP 374
Query: 149 NRPVYTTLI-TMCGR 162
Y I ++CG+
Sbjct: 375 GYVAYNIFIGSICGQ 389
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V L+ GL G +++ ++ +M +G P+ T+ LI C +G
Sbjct: 739 MEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGL 798
Query: 61 VE---------------------FCVEMYYS---VCKLGSCADVST---------YKILI 87
++ C +S + LG ++ + Y +LI
Sbjct: 799 LDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLI 858
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHN---PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+ SKAG ++ A L LVE + +YA +I+ Q ++AF ++E+ K
Sbjct: 859 DSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRK 918
Query: 145 GHPPNRPVYTTLI 157
G P+ V+ +L+
Sbjct: 919 GIVPDLIVFVSLV 931
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST---YKILIP 88
++ +M + P + LI++ K+G +E +E++ + ++ S ++++ Y LI
Sbjct: 838 LLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQ 897
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+ A ++EAF L + G P ++ ++KG ++D+A
Sbjct: 898 ALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEAL 944
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLET---FNSLIETICKSGEVEFCV 65
PV G +L+ AG LE+A ++ ++++ S ++ + + SLI+ +C + +VE
Sbjct: 852 PVYG--MLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAF 909
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
+Y + + G D+ + L+ + + DEA +L + +G N
Sbjct: 910 TLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVN 956
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++++GL G ++ A + M + G D T+ L++ CK+G + + + +
Sbjct: 63 NIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEE 122
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D Y +I + K +DEA +L+ ++++G P +Y +I G +FDD
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDD 182
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ P Y TLI +G RF EA + + EM E G P + L+
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMK 242
Query: 194 GLKNCGKHDLAEKIEQLEVS 213
GL K ++A ++ +S
Sbjct: 243 GLCQGHKVEMALQLWNQVIS 262
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ +P + ++ G AG ++ ++ M ++ S ++ +FN ++ + +G+
Sbjct: 16 MAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDSQ-NVVSFNIMMRGLFGNGD 74
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D +TY IL+ K G I+++ R+L E G Y+
Sbjct: 75 VDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAYSA 134
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A + + G PN VY TLI +F +A EM
Sbjct: 135 MINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTN 194
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+P ++ + +GL C AE
Sbjct: 195 CSPTVVTYNTLINGL--CKGERFAE 217
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+ P V LL++GL +E A Q+ N++I G PD++ N LI +C G+
Sbjct: 225 MLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y+ + + ++ T+ L+ K G I A + ++ +G P Y
Sbjct: 285 TQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNI 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+KG + A F + K P+
Sbjct: 345 TLKGLCSCSRISFAILFLQDALAKKIAPS 373
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G + + A ++ +M P + T+N+LI +CK
Sbjct: 155 MIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGER 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V TY +L+ + + ++ A +L + ++ +G P +
Sbjct: 215 FAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNI 274
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ A + ++ PN + TL+ + G A + G
Sbjct: 275 LIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNG 334
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P +++ GL +C + A
Sbjct: 335 LQPDIVSYNITLKGLCSCSRISFA 358
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + ++ GL G E A +N++++ G PD T+N+++ C+ G+
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGD 573
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + + DV T IL+ + G++++A +L + V G Y
Sbjct: 574 VEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNT 633
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DDAF SE++ K P+ Y +IT GR EA ++ +M E G
Sbjct: 634 LITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Query: 181 LTP 183
P
Sbjct: 694 NLP 696
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++LV G G+L+ A ++ M + PD+ T+N LI +C G
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + L DV +Y LI + I EAF+LL + E G P +
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K + G+ DDA ++++ G P+ Y TLI + G EA M EMG
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA---FRTMDEMG 445
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++++ G + A + +N M K PD T+N++++T+CK G +
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDA 262
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G + +TY IL+ K G + EA ++ + ++ P Y +I G
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ ++AF E++ P+ Y TLI C + EA L EM+E G+ P
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382
Query: 185 SRCFDLVTDGLKNCGKHDLAEK-IEQLEVS 213
+ +++ GK D A I ++E S
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEES 412
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ ++M ++ P T+N +I +C+ G+ E + + + G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +TY ++ + G +++AF+ + +VE+ P +++G G + A
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL 613
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ KG + Y TLIT + GR +A N L EM E L P ++ + L
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673
Query: 196 KNCGKHDLAEK 206
+ G+ AE+
Sbjct: 674 TDSGRIREAEE 684
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ G P + ++ G G +E A Q NKM++ PD+ T N L+ +C G +E
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++++ + G D TY LI ++ K G +D+AF LL + E P Y II
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
G+ +A F S++ KG+ P++
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGNLPDQ 698
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 3/197 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK---SGEVEFCVEMYYS 70
D + + +G A Q+ KM + P+L T N+L+ ++ + S V F E +
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
KLG +V+T+ I+I +A L+ + + +P Y I+ ++G+
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGR 258
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
DA ++K +G PNR Y L+ + G EAAN + MT+ L P +++
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318
Query: 191 VTDGLKNCGKHDLAEKI 207
+ +GL N G+ + A K+
Sbjct: 319 LINGLCNEGRIEEAFKL 335
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF+P + L+ G AG + A + +++M ++ D T N+++ T+C+ +
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ S K G D +Y LI K G +D A +L + E P Y
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G+ + A +E+ G P+ Y T++ R G +A + +M E
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 181 LTP 183
P
Sbjct: 589 FKP 591
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
M+ P V ++L+ GL N G +E A ++ ++M PD+ ++N+LI
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 53 ---------------------------ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ CK G+++ + + G D TY
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI KAG + EAFR + + I++ R + ++A+ S + +G
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ + Y TLI + G A EM E + P + ++ + GL CGK + A
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG + +++V+GL G LE A + M ++G PD+ T+N+LI+ CK+G
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G D T L+ + K +EA LL + G P Y
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT 495
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ F+ + + A C + E+ + P+ Y TLI G+ EA + L E+ EMG
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P ++++ C + DL + +
Sbjct: 556 LVPDDTTYNIIIHAY--CKEGDLEKAFQ 581
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L++GL G L A +N++++ G PD T+N +I CK G+
Sbjct: 516 MIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGD 575
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + DV T L+ + G +++A +L + VE G Y
Sbjct: 576 LEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNT 635
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + D A FF++++++G P+ Y L++ GR VEA L ++ E G
Sbjct: 636 LIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + L+ G L A+ ++ +M K+G P T+N+L+ + G ++
Sbjct: 239 GLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQA 298
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG-HNPFPSLYAPIIK 123
++ ++ G D+ TY +L + +AG +DEAF+L + + G +P Y ++
Sbjct: 299 TDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVD 358
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F+ + DA E++ KG + + ++ R G+ EA L MTE GLTP
Sbjct: 359 ACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTP 418
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++ + D +C ++A+ ++ +RS
Sbjct: 419 DVITYNTLIDA--SCKAGNVAKAFVLMDEMVRS 449
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 3/197 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + F P V + L+ GL G LE A ++ +++G D+ T+N+LI+ +CK +
Sbjct: 586 MVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDND 645
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G DV TY +L+ A+S+AG EA ++LH L E G + + P
Sbjct: 646 VDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG-KLYGRFFYP 704
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP--NRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
IK + + S+I+ G+ ++ Y I GG+ EA L EM +
Sbjct: 705 SIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQ 764
Query: 179 MGLTPISRCFDLVTDGL 195
G++ + + + +GL
Sbjct: 765 KGMSVDNSTYITLMEGL 781
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 3/200 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+LLV + G L A ++KM G PD T+N+L+ C+ G + + + K
Sbjct: 213 NLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKK 272
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +TY L+ A ++ G I +A ++ + G P Y + G + G+ D+
Sbjct: 273 EGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDE 332
Query: 134 AFCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
AF E++ G P+ Y TL+ C + R +A N L EM E G+ +++
Sbjct: 333 AFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIV 392
Query: 193 DGLKNCGKHDLAEKIEQLEV 212
GL C + L E + +LE+
Sbjct: 393 KGL--CREGQLEEALGRLEM 410
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 8 PPVRG--RDLLVQGLLNAGYLESAKQ-----MVNKMIKQGSDPDLETFNSLIETICKSGE 60
PP RG D + G + A Y + K + ++MIK+ P + T+N+LI+ + G+
Sbjct: 481 PPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGK 540
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + ++G D +TY I+I A K G +++AF+ + +VE+ P
Sbjct: 541 LTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNT 600
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F KG + Y TLI + A + +M G
Sbjct: 601 LMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRG 660
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++++ L G+ A+K+
Sbjct: 661 LQPDVFTYNVLLSALSEAGRSVEAQKM 687
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 29 AKQMVNKMIKQG-SDPDLETFNSLIETICKSGEV--EFCVEMYYSVCKLGSCADVSTYKI 85
A Q+++ ++G P L+ N+++ + +S + ++ ++S+ L + T+ +
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ G + +A L + G +P Y ++ R+G +A + +K +G
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD--- 202
P R Y TL++ R G +A + + MT G P ++++ GL GK D
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334
Query: 203 -LAEKIEQLEV 212
L +++EQL +
Sbjct: 335 KLKDEMEQLGI 345
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P V + L+ AG + A ++++M++ G D T N+L+ +CK
Sbjct: 411 MTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKR 470
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + G D +Y ++ A K + A L +++ P S Y
Sbjct: 471 YEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNT 530
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG G+ +A +E+ G P+ Y +I + G +A + +M E
Sbjct: 531 LIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENS 590
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + +GL G+ + A K+
Sbjct: 591 FKPDVVTCNTLMNGLCLYGRLEKAMKL 617
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P + L+ G G +E A ++ ++M ++G +P++ TF++LI+ CK+G+
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y + G DV Y LI K G EAFRL + E G +P +
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513
Query: 121 IIKGAFRRGQFDDAFCFF-------------SEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
+I G + G+ DA F +E+ PN +YT LI GR
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIF 573
Query: 168 EAANYLMEMTEMGLTP 183
+A+ + +M GL P
Sbjct: 574 KASKFFSDMRCSGLRP 589
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + ++ G +++ A ++ +M+ G P++ TF LI+ +CK+ E
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDE 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ + + G ++ Y LI KAG + EA LH+ +E H P + Y
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS-LHSEIEK-HEILPDVFTY 371
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +IKG + ++A E+K KG PN Y TLI + G +A +MTE
Sbjct: 372 SILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLA 204
G+ P F + DG GK + A
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKMEAA 457
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P V +L++GL + A+ M M G P+L T+N++++ CK
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + G +V T+ ILI + K + A + L ++ G P +Y
Sbjct: 279 VKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I G + G +A SEI+ P+ Y+ LI +CG R EA L EM +
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV-DRMEEADGLLQEMKKK 397
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
G P + ++ + DG C + ++ + IE
Sbjct: 398 GFLPNAVTYNTLIDGY--CKEGNMEKAIE 424
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++GL +E A ++ +M K+G P+ T+N+LI+ CK G +E +E+
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G ++ T+ LI KAG ++ A L +V G P Y +I G F+
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
G +AF E++ G PN + LI + GR +A + T
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL + SA++ + M G P++ +N LI+ CK+G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + K DV TY ILI + ++EA LL + + G P Y
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A S++ KG PN ++TLI + G+ A EM G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 181 LTPISRCFDLVTDG 194
L P + + DG
Sbjct: 469 LLPDVVAYTALIDG 482
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + + L+ G AG L A + +++ K PD+ T++ LI+ +C
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + K G + TY LI K G +++A + + E G P ++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A ++E+ IKG P+ YT LI + G EA EM E G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + DGL G+ A K+
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKL 530
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++ ++++ GL+ G ++ ++ M+ +G+ P++ T+ +LI+ C+ G+ +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + V Y ILI + I EA + + G P Y ++ G +
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
A + E+ G PN + LI + V A +L++M G+ P
Sbjct: 276 IAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + DG C +L+E +
Sbjct: 336 YNCLIDGY--CKAGNLSEAL 353
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V L+ G G A ++ ++MI++ P + + LI +C
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M+ ++ G ++ TY ++ K + +A L ++ DG P +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + A F ++ G PN VY LI + G EA + E+ +
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + ++ GL CG + E
Sbjct: 364 ILPDVFTYSILIKGL--CGVDRMEE 386
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 76/199 (38%), Gaps = 17/199 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ G G + A ++ +M + G P++ T + LI+ +CK G
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523
Query: 61 VEFCVEMYYSVCKLGSCADVST-------------YKILIPAVSKAGMIDEAFRLLHNLV 107
+ ++++ + + + Y LI + G I +A + ++
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
G P II+G FR D ++I G PN VY L G
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLK 643
Query: 168 EAANYLMEMTEMGLTPISR 186
A ++ E G+ P+ R
Sbjct: 644 SALSFCGE----GVQPLDR 658
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ +M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G +++A L+ + G P Y
Sbjct: 257 VDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A + EM G
Sbjct: 317 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 377 LKPDTGTYTMIINEF--CKKGDVWK 399
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L ++ + M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 222 MDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G + A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 282 LIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLK 378
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 107 MLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G ++E F+L + G P Y+ +I G + + DDA
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 227 ELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGL 286
Query: 196 KNCG----KHDLAEKI 207
G HDL +++
Sbjct: 287 CKKGALNQAHDLMDEM 302
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G +
Sbjct: 235 KGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQ 294
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 295 AHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 354
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 355 GLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 414
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G++
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEG 190
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 191 FKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDG 250
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 251 HCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPD 310
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 311 KITYTTLIDGC--CKEGDLDTAFEH 333
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L A ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A +++ ++ G P Y
Sbjct: 327 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ GH P+
Sbjct: 387 IINEFCKKGDVWKGSKLLKEMQRDGHAPS 415
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 74/192 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K Y + + G
Sbjct: 72 LITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G ++ F
Sbjct: 132 YPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 192 KLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA ++
Sbjct: 252 CKNGRVDLAMEV 263
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V L+ L E A++++ +++ QG +P++ FN++++++CK G
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + +G DV TY LI AG +D A +LL +V G P Y+
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E++ G P+ Y ++ R R A +TE G
Sbjct: 363 LINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESG 422
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ L G A+++ + M+K+G PD+ T+ +L+ G
Sbjct: 103 MCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGA 162
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G D + ILI A +K +DE + + + G P Y
Sbjct: 163 LVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRT 222
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DDA F ++ KG PN VYT+LI ++ +A + E+ + G
Sbjct: 223 VIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQG 282
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+ + D L G+
Sbjct: 283 INPNIVFFNTILDSLCKEGR 302
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G ++G E A + KM G +PD+ T+NSL++ +CK+G+ +++ S+ K G
Sbjct: 83 IMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRG 142
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D++TY L+ + G + E LL +V++G ++ +I ++ + D+
Sbjct: 143 LKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVV 202
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FS+++ +G PN Y T+I + GR +A +M + GLTP + + L
Sbjct: 203 LVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHAL 262
Query: 196 KNCGKHDLAEKI 207
K + AE++
Sbjct: 263 CTYDKWEKAEEL 274
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 8/225 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ GL G L+ A +MI +G P++ + SLI +C +
Sbjct: 208 MRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDK 267
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + G ++ + ++ ++ K G + E+ +L L G NP Y+
Sbjct: 268 WEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYST 327
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D A + + G P+ Y+TLI + R +A EM G
Sbjct: 328 LIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNG 387
Query: 181 LTPISRCFDLVTDGL----KNCGKHDLAEKI----EQLEVSLRSV 217
+ P ++++ GL + +L +I QLE+S ++
Sbjct: 388 VNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNI 432
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ +P + ++ L A ++ A +++ M+ P+ T+NS++ C SG+
Sbjct: 37 MLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVM----PNCFTYNSIMHGYCSSGQ 92
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + ++ +C G DV TY L+ + K G EA ++ ++V+ G P + Y
Sbjct: 93 SEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGT 152
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +G + + + G + V+ LI + + E +M + G
Sbjct: 153 LLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG 212
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
LTP + + V DGL G+ D A
Sbjct: 213 LTPNAVNYRTVIDGLCKLGRLDDA 236
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G + G L ++ M++ G D FN LI K +
Sbjct: 138 MVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEK 197
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V ++ + + G + Y+ +I + K G +D+A +++ G P +Y
Sbjct: 198 VDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTS 257
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +++ A EI +G PN + T++ + GR +E+ + +G
Sbjct: 258 LIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIG 317
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + DG GK D A K+
Sbjct: 318 VNPDVITYSTLIDGYCLAGKMDGAMKL 344
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 8/171 (4%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
PD+ ++N++I+ + K G+V+ Y+ + D TY +I A+SKA +D A +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L +V P Y I+ G GQ + A F ++ G P+ Y +L+ +
Sbjct: 69 LTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK----HDLAEKIEQ 209
G+ EA M + GL P + + G + G HDL + Q
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQ 175
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
+KM +QG P+ + ++I+ +CK G ++ + + + G +V Y LI A+
Sbjct: 206 SKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTY 265
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
++A L+ +++ G NP + I+ + G+ ++ F + G P+ Y
Sbjct: 266 DKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITY 325
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+TLI G+ A L M +GL P S + + +G
Sbjct: 326 STLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G +E A + +M G +PD+ T+N ++ + ++
Sbjct: 348 MVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRR 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
E+Y + + G+ ++STY I++ +K
Sbjct: 408 TAAAKELYARITESGTQLELSTYNIILMDFAKT 440
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G V+ ++++ G ++ A + +M + PD+ T+NSLI+ +CKSG+
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G D TY ++ A+ K +D+A LL + ++G P Y
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA F ++ +KG+ YT +I F +A L +M + G
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNG 506
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ ++++ L ++D+AEK+
Sbjct: 507 CIPNAKTYEIIILSLFEKDENDMAEKL 533
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + NP V +LV G G ++ AK ++ M+KQG PD+ T+ SL++ C +
Sbjct: 257 MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQ 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ ++ + G A+V +Y I+I K +DEA L + P Y
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNS 376
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A E+ +G P ++ Y +++ + + +A L +M + G
Sbjct: 377 LIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ DGL G+ A+ I
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNI 463
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ G G L A + NKMI + +PD+ TF+ L++ CK G
Sbjct: 222 MVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGR 281
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + K G DV TY L+ +++A + + + + G Y
Sbjct: 282 VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNI 341
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A F E+ K P+ Y +LI + G+ A + EM + G
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ ++ + D L C H + + I L
Sbjct: 402 VPHDKITYNSILDAL--CKNHQVDKAIALL 429
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG+ P L++GL G + A +K++ G + + +LI +CK G+
Sbjct: 120 KGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSA 179
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ V +V Y +I ++ K +++EAF L +V G +P Y+ +I
Sbjct: 180 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALIS 239
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +DA F+++ + P+ ++ L+ + GR EA N L M + G+ P
Sbjct: 240 GFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP 299
Query: 184 ISRCFDLVTDG 194
+ + DG
Sbjct: 300 DVVTYCSLMDG 310
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G+ + + ++K+G +P+ T +LI+ +C G++ + + V
Sbjct: 95 NILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVA 154
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG + Y LI + K G A +LL + P +Y II + ++
Sbjct: 155 LGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 214
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF +SE+ KG P+ Y+ LI+ G+ +A +M + P F ++ D
Sbjct: 215 AFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVD 274
Query: 194 GLKNCGKHDLAEKI 207
G G+ A+ +
Sbjct: 275 GFCKEGRVKEAKNV 288
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 89/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +A Q++ ++ + P++ +N++I+++CK V ++Y + G
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI G +++A L + ++ + NP ++ ++ G + G+ +A
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + +G P+ Y +L+ + +A + M + G+T + ++++ +G
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346
Query: 196 KNCGKHDLA 204
K D A
Sbjct: 347 CKIKKVDEA 355
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 75/193 (38%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ ++ L+ ++A + +M G DL TFN LI + G F +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ K G + T LI + G I +A +V G + Y +I G +
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
GQ A + K PN +Y T+I + EA + EM G++P
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233
Query: 188 FDLVTDGLKNCGK 200
+ + G GK
Sbjct: 234 YSALISGFCILGK 246
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + ++ L ++ A ++ KM +G PD+ T+ LI+ +CK G
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G V TY ++I + D+A LL + ++G P Y
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
II F + + D A E+ +G
Sbjct: 517 IILSLFEKDENDMAEKLLREMIARG 541
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 70/162 (43%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
N+++ P + F ++ ++ K + + ++ + G +D+ T+ ILI S+
Sbjct: 45 NRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQL 104
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G +F + N+++ G+ P +IKG +GQ A F ++ G N+ Y
Sbjct: 105 GHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCY 164
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
TLI + G+ A L + + P ++ + D +
Sbjct: 165 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 206
>gi|302813796|ref|XP_002988583.1| hypothetical protein SELMODRAFT_42378 [Selaginella moellendorffii]
gi|300143690|gb|EFJ10379.1| hypothetical protein SELMODRAFT_42378 [Selaginella moellendorffii]
Length = 478
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 6/211 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI----KQGSDPDLETFNSLIETICKS 58
D G+ P + LV GL AG + A ++ +M + + L N+LI+ +C++
Sbjct: 97 DLGWMPSAVTCNTLVAGLCKAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRA 156
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSL 117
G V+ +E+ + CK + + TY ILI + K+ +++ RLL + G NP +
Sbjct: 157 GRVDEALELVFERCKDKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAAT 216
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT-TLITMCGRGGRFVEAANYLMEM 176
Y I+ G + A FFS + PV TL+ + GR ++A L EM
Sbjct: 217 YNSIVAGFCELDMVEQALEFFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEM 276
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+G P S+ + L+ + L N G+ D A K+
Sbjct: 277 DRVGCQPSSQVYCLMIEELCNSGEADKACKL 307
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSG 59
+ +G NP + +V G +E A + + + QG+ PD +L+ +CKSG
Sbjct: 206 TSRGLNPDAATYNSIVAGFCELDMVEQALEFFSN-VTQGNKCAPDPVMIGTLVNGLCKSG 264
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS-LY 118
+E+ + ++G Y ++I + +G D+A +LLH + G P + Y
Sbjct: 265 RSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTY 324
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG------RGGRFVEAANY 172
I+ G ++ + + A +KG + +++T C + GRF EA +
Sbjct: 325 TMIVDGLYKTHRPEKA-----RRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWF 379
Query: 173 LMEMTEMGLTPISRCFDLVTDGLKNCGK 200
L+ M +MG + ++ + GL K
Sbjct: 380 LLSMGQMGSKANTHIYNSLLGGLCKAAK 407
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 4 KGFNPPVRGR-DLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSGEV 61
KG P G ++V GL E A++ + ++ S P + T ++I+ +CKSG
Sbjct: 314 KGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRF 373
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
S+ ++GS A+ Y L+ + KA + EA H + ++G P Y +
Sbjct: 374 SEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFFHEMQDEGL-PSVVTYNIL 432
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
+ G + + ++A F + P Y TL R G+
Sbjct: 433 LDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRSGKMA 478
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF-SE 140
+Y +L+ +AG + +A RL+ + P + + I+KG + G+ ++A F S
Sbjct: 1 SYNLLVRGYCEAGEVCKALRLVKEMKARDLAPNEATHGEILKGFCQIGRMEEALEHFRSV 60
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM-TEMGLTPISRCFDLVTDGLKNCG 199
I G P +Y TLI + + +A N EM ++G P + + + GL G
Sbjct: 61 IDTSGVDP--AMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAG 118
Query: 200 KHDLAEKI 207
D A K+
Sbjct: 119 SFDKAVKL 126
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P LV G ++G L A + + KM G +P++ T++S ++ +CK+G
Sbjct: 259 MVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGR 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY L+ + G + E L +V+ P ++
Sbjct: 319 CTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNT 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + ++G+ D+A FS+++ +G PN Y+TLI + R A EM G
Sbjct: 379 LIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNG 438
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
++P ++++ GL G+ A++
Sbjct: 439 VSPNFITYNIMLQGLFRTGRTATAKE 464
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 5/208 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V +L+ +AG L+ + ++K+G + FN L++ +C + ++
Sbjct: 87 TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146
Query: 67 MYY-SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIK 123
+ + +L +V ++ I++ + EA LLH + +DG P++ Y+ +I
Sbjct: 147 IVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVID 206
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G D A+ + E+ + PN +Y+++I +G +A M + G+TP
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP 266
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
CF + C L E I+ LE
Sbjct: 267 --NCFTYTSLVHGFCSSGQLTEAIKFLE 292
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 2/206 (0%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G P V ++ GLL G + A +M+ + P++ ++S+I +CK
Sbjct: 187 MADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKG 246
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
++ +E++ + K G + TY L+ +G + EA + L + +G P Y
Sbjct: 247 QAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTY 306
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + + G+ +A F + +G P+ Y++L+ G VE M +
Sbjct: 307 SSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQ 366
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLA 204
+ P F+ + GK D A
Sbjct: 367 SDMQPDHYVFNTLIYASAKQGKVDEA 392
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G G L + + M++ PD FN+LI K G+
Sbjct: 329 MVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGK 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G + TY LI K ++ A L +V +G +P Y
Sbjct: 389 VDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNI 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+++G FR G+ A F+ +I G
Sbjct: 449 MLQGLFRTGRTATAKEFYVQIIKSG 473
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA-- 78
+ +G E A + ++++++G + + N + + + V + + + G+
Sbjct: 29 VGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAA-AVSRFNRMARAGASMVT 87
Query: 79 -DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
V TY ILI AG +D F L ++V+ G P ++ P++KG + DDA
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM-- 145
Query: 138 FSEIKIKGHP-----PNRPVYTTLITMCGRGGRFVEAANYLMEMTE--MGLTPISRCFDL 190
+I ++G PN +T ++ R EA L M + G P +
Sbjct: 146 --DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYST 203
Query: 191 VTDGLKNCGKHDLA 204
V DGL G D A
Sbjct: 204 VIDGLLKGGDPDKA 217
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ G + A ++ ++M+ +G P+ F +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 383 LKPDARTYTMIINEF--CKKGDVWK 405
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 233 ELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G + + LI K G +D A + ++ +P Y
Sbjct: 228 XDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + GL G+ AEK+ E L V L+
Sbjct: 348 XRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLK 384
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 AHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI K D+A L ++ G P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KITYTTLIDGC--CKEGDLDXAFEH 339
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + G +A ++L ++ G P Y
Sbjct: 333 LDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L+ A + +MI++ D + +LI +C G
Sbjct: 308 MSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L AG +E A + +++K G P+ +N+LI C+SG+V+ E++ + +
Sbjct: 263 LIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 322
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY IL+ S+ G A LL +V +GH P + Y +I+ GQ +DA+
Sbjct: 323 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAY 382
Query: 136 CFFSEIKIKGHPPNRPVYTTL 156
F E+ KG P+ Y+ L
Sbjct: 383 TLFKEMIAKGFNPDMQTYSAL 403
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVE 66
P V + L+ G AG + A M ++ ++GS P+ +F++L+ +CK +
Sbjct: 9 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + G ADV+ LI + GM+ +A RLLH++ Y+ ++
Sbjct: 69 VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ A FS ++ G P+ VY LI+ G+ G+ EA L +M G+ P R
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188
Query: 187 CFDLVTDGLKNCGKHDLA 204
+++V D L +CG+++ A
Sbjct: 189 TYNIVIDVLSSCGRYEKA 206
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P V + L+ GL + A + ++M PDL TF +LI+T+ K+G
Sbjct: 213 MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGR 272
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E + K+G + Y LI ++G +D+ + L +++E P Y
Sbjct: 273 MEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTI 332
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G RRG A E+ +GH P Y LI G+ +A EM G
Sbjct: 333 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 392
Query: 181 LTP 183
P
Sbjct: 393 FNP 395
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P R ++++ L + G E A M ++ PD+ T+N+L+ + K
Sbjct: 178 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + D++T+ LI ++KAG +++A LV+ GH P +Y
Sbjct: 238 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNA 297
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R GQ D + F ++ P+ YT L+ R G A L EM G
Sbjct: 298 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 357
Query: 181 LTPISRCFDLVTDGLKNCGK 200
TP ++++ L G+
Sbjct: 358 HTPALATYNVLIRSLSMAGQ 377
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V + L+ G L A+++++ M D+ T++ L++ + K+G
Sbjct: 73 MLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGR 132
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ ++ K G D Y +LI + K G +DEA LL ++ G P Y
Sbjct: 133 AAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 192
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+++ A+ FF +K + H P+ Y TL+ + R EA + EM
Sbjct: 193 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P F + D L G+ + + LE S R V
Sbjct: 253 CMPDLTTFGTLIDTLAKAGRME-----DALEQSARLV 284
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ F V L+ L AG A ++ + M K G PD +N LI + K G+
Sbjct: 108 MTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGK 167
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G D TY I+I +S G ++A+ + H+P Y
Sbjct: 168 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 227
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D+A F E++ P+ + TLI + GR +A + +MG
Sbjct: 228 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 287
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P S ++ + G G+ D ++ Q
Sbjct: 288 HVPNSYIYNALISGFCRSGQVDKGYELFQ 316
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ L G ++ A +++ M ++G PD T+N +I+ + G
Sbjct: 143 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 202
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + DV TY L+ + K DEA L + + P + +
Sbjct: 203 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 262
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +DA + + GH PN +Y LI+ R G+ + +M E
Sbjct: 263 LIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 322
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P S + ++ G G +A ++ Q
Sbjct: 323 CFPDSITYTILVLGFSRRGHTSMAMELLQ 351
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P D LV L A + +M+ G D+ N+LI C+ G + +
Sbjct: 45 PNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRL 104
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + DV TY L+ A+ KAG +A + N+ + G P +Y +I +
Sbjct: 105 LHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGK 164
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G+ D+A ++ KG P+ Y +I + GR+ +A ++ M +P
Sbjct: 165 QGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVT 224
Query: 188 FDLVTDGLKNCGKHDLA 204
++ + +GLK + D A
Sbjct: 225 YNTLLNGLKKLRRTDEA 241
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV G G+ A +++ +M+++G P L T+N LI ++ +G+VE ++ +
Sbjct: 332 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAK 391
Query: 75 GSCADVSTYKIL 86
G D+ TY L
Sbjct: 392 GFNPDMQTYSAL 403
>gi|224576639|gb|ACN56993.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G + G+ ++A
Sbjct: 17 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 76
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+F G N Y++LI G+ GR EA EM+E G T S C++ + D
Sbjct: 77 LDYFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDA 136
Query: 195 LKNCGKHDLA 204
L GK D A
Sbjct: 137 LTKHGKVDEA 146
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIXKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTP 183
G+TP
Sbjct: 192 KGITP 196
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI +GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIXKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 155
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIXKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERL 114
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ G G + A ++ ++M +G +PD TF LI CK+G
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G +V TY LI + K G +D A LLH + + G P Y
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G ++A E + G + YTTL+ + G +A L EM G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F+++ +G G + EK+
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++ L L A++ ++MI+QG PD + +LI+ CK G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + DV TY +I + G + EA +L H + G P +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DAF + + G PN YTTLI + G A L EM ++G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + +GL G + A K+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ GL G L+SA +++++M K G P++ T+NS++ +CKSG
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V++ G AD TY L+ A K+G +D+A +L ++ G P +
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + + KG PN + +L+ C R A Y +M
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY-KDMCSR 625
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P + ++ + G +C ++ E
Sbjct: 626 GVGPDGKTYENLVKG--HCKARNMKE 649
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-GEV 61
D G +P R D+ Q L++ G L A+++ KM+ G +++ N + + K +
Sbjct: 170 DWGSDP--RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ ++ ++G C +V++Y I+I V + G I EA LL + G+ P Y+ +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G R G+ D + +K KG PN +Y ++I + R + EA EM G+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 182 TPISRCFDLVTDGLKNCGKHDL 203
P + + + DG C + D+
Sbjct: 348 LPDTVVYTTLIDGF--CKRGDI 367
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G AG+++ A ++ N MI+ G P++ T+ +LI+ +CK G+++
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + + K+G ++ TY ++ + K+G I+EA +L+ G N Y ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ D A E+ KG P + L+ G + L M G+ P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 184 ISRCFD 189
+ F+
Sbjct: 595 NATTFN 600
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ G G LE ++++N M+ +G P+ TFNSL++ C
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y +C G D TY+ L+ KA + EA+ L + G + S Y+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 121 IIKGAFRRGQFDDA------------------FCFFSEIKIKGHPPNRPV 152
+IKG +R +F +A F FFS+ K KG P+ V
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G + +A + +M + PD+ T+ ++I C+ G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + G D T+ LI KAG + +AFR+ +++++ G +P Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D A E+ G PN Y +++ + G EA + E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + + + D G+ D A++I
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEI 548
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 35/228 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + +V GL +G +E A ++V + G + D T+ +L++ CKSGE
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPS 116
++ E+ + G + T+ +L+ GM+++ +LL+ ++ G P F S
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 117 L-------------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L Y ++KG + +A+ F E+K KG
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+ Y+ LI + +F+EA +M GL FD +D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V ++++ + G ++ A ++ M +G PD+ ++++++ C+ GE++ ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ + G + Y +I + + + EA ++ G P +Y +I G +RG
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
A FF E+ + P+ YT +I+ + G VEA EM GL P S F
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 190 LVTDGLKNCG 199
+ +G G
Sbjct: 426 ELINGYCKAG 435
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P + L+ G G +E A ++ ++M ++G +P++ TF++LI+ CK+G+
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +Y + G DV Y LI K G EAFRL + E G +P +
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513
Query: 121 IIKGAFRRGQFDDAFCFF-------------SEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
+I G + G+ DA F +E+ PN +YT LI GR
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIF 573
Query: 168 EAANYLMEMTEMGLTP 183
+A+ + +M GL P
Sbjct: 574 KASKFFSDMRCSGLRP 589
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + ++ G +++ A ++ +M+ G P++ TF LI+ +CK+ E
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ + + G ++ Y LI KAG + EA LH+ +E H P + Y
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS-LHSEIEK-HEILPDVFTY 371
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +IKG + ++A E+K KG PN Y TLI + G +A +MTE
Sbjct: 372 SILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLA 204
G+ P F + DG GK + A
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKMEAA 457
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P V +L++GL + A+ M M G P+L T+N++++ CK
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + G +V T+ ILI + K + A + L ++ G P +Y
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I G + G +A SEI+ P+ Y+ LI +CG R EA L EM +
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV-DRMEEADGLLQEMKKK 397
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
G P + ++ + DG C + ++ + IE
Sbjct: 398 GFLPNAVTYNTLIDGY--CKEGNMEKAIE 424
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++GL +E A ++ +M K+G P+ T+N+LI+ CK G +E +E+
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G ++ T+ LI KAG ++ A L +V G P Y +I G F+
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
G +AF E++ G PN + LI + GR +A + T
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL + SA++ + M G P++ +N LI+ CK+G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + K DV TY ILI + ++EA LL + + G P Y
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A S++ KG PN ++TLI + G+ A EM G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 181 LTPISRCFDLVTDG 194
L P + + DG
Sbjct: 469 LLPDVVAYTALIDG 482
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + + L+ G AG L A + +++ K PD+ T++ LI+ +C
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + K G + TY LI K G +++A + + E G P ++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A ++E+ IKG P+ YT LI + G EA EM E G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + DGL G+ A K+
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKL 530
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++ ++++ GL+ G ++ ++ M+ +G+ P++ T+ +LI+ C+ G+ +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + V Y ILI + I EA + + G P Y ++ G +
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
A + E+ G PN + LI + V A +L++M G+ P
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + DG C +L+E +
Sbjct: 336 YNCLIDGY--CKAGNLSEAL 353
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V L+ G G A ++ ++MI++ P + + LI +C
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M+ ++ G ++ TY ++ K + +A L ++ DG P +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + A F ++ G PN VY LI + G EA + E+ +
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + ++ GL CG + E
Sbjct: 364 ILPDVFTYSILIKGL--CGVDRMEE 386
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 13/169 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ G G + A ++ +M + G P++ T + LI+ +CK G
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523
Query: 61 VEFCVEMYYSVCKLGSCADVST-------------YKILIPAVSKAGMIDEAFRLLHNLV 107
+ ++++ + + + Y LI + G I +A + ++
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
G P II+G FR D ++I G PN VY L
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ L ++ A + N+M +G PD T++SLI+ +CKS + E+
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL 367
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G ADV TY + A+ K +D+A L+ + + G P + Y +I G +
Sbjct: 368 LDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+F++A F ++ IKG+ Y +I G F EA L +M + G TP
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + L ++ AEK+
Sbjct: 488 YETIIRALFKNDENHKAEKL 507
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 17/226 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M K +P V L+ G G + A + ++M+ +PD+ TFN L++ +CK G
Sbjct: 214 MIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGS 273
Query: 60 ----------------EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
+V ++ + K DV +Y I+I + K M+DEA L
Sbjct: 274 TKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLF 333
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ + G P Y+ +I G + + A+ ++ +G P + YT+ + +
Sbjct: 334 NEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKN 393
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ +A + ++ + G+ P ++++ DGL G+ + A+ I Q
Sbjct: 394 HQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQ 439
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ GL + + A +++++M +G D+ T+ S + +CK+ +
Sbjct: 336 MRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQ 395
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G +++TY ILI + K G + A + +L+ G+ Y
Sbjct: 396 VDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNI 455
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G FD+A +++ G P+ Y T+I + +A L EM G
Sbjct: 456 MINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515
Query: 181 L 181
L
Sbjct: 516 L 516
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
P + + ++ + G ++ A ++ K++K G PD T +LI+ +C +G+V
Sbjct: 78 AITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEA 137
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + V G + +Y ILI + K G A ++L + N +Y+ II
Sbjct: 138 LHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDS 197
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ +A+ +S++ +K P+ ++ LI G+F EA EM + P
Sbjct: 198 LCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPD 257
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
F+++ D L C + E L V ++ V
Sbjct: 258 VCTFNILVDAL--CKEGSTKETKNVLAVMMKEV 288
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 19/225 (8%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF +L+ GL G +A Q++ K+ + + ++ ++++I+++CK V
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+Y + DV T+ LI G EAF L H +V NP + ++
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266
Query: 124 GAFRRG-----------------QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+ G Q + A F+ I + P+ YT +I +
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV 326
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
EA + EM G+TP + + DGL C ++ E L+
Sbjct: 327 DEALSLFNEMRCKGITPDKVTYSSLIDGL--CKSERISHAWELLD 369
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 4/203 (1%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V + L+ G ++ A + +M +Q P+ T+N+LI +C G ++ + +++
Sbjct: 290 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 349
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ G D+ TY+ L + K +D+A LL + +P +Y I+ G R G
Sbjct: 350 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 409
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ +DA FS + KG PN Y +I + G EA+ EM + G +P ++
Sbjct: 410 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 469
Query: 190 LVTDG-LKNCGKHDLAEKIEQLE 211
L+T G L+N ++ IE LE
Sbjct: 470 LITRGFLRN---NEALRTIELLE 489
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P V + +V L G + A +V+ MI +G +P++ T+N+L++ C E
Sbjct: 211 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V+++ ++ A+V +Y LI K +D+A L + P Y
Sbjct: 271 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ DA F E+ +G P+ Y TL + +A L +
Sbjct: 331 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 390
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + DG+ G+
Sbjct: 391 WDPDIQIYTTILDGMCRAGE 410
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + + L+ L N + ++N+M+ P++ F+++++ +CK G
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 723
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G DV TY L+ +DEA ++ +V G P Y
Sbjct: 724 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 783
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A ++ ++G + Y TLI GR A EM G
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P + ++ D L C H LAE + L+
Sbjct: 844 QIPDLVTYRILLDYL--CKNHHLAEAMVLLK 872
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS + P + L+ GL + G L+ A + ++M+ +G PDL T+ +L + +CK+
Sbjct: 316 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++ D+ Y ++ + +AG +++A L NL G P Y
Sbjct: 376 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A FSE+ G PN Y + R + L EM G
Sbjct: 436 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 495
Query: 181 LT 182
+
Sbjct: 496 FS 497
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P V L+ GL + A + ++MI +G P++ T+NSLI +CK E
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + DV T ++ A+ K GM+ EA ++ ++ G P Y
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + D A F + K N Y TLI + +A EM+
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320
Query: 181 LTPISRCFDLVTDGLKNCGK 200
LTP + ++ + GL + G+
Sbjct: 321 LTPNTVTYNTLIHGLCHVGR 340
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +V L G + A +V+ MIK+G +PD+ T+ +L++ C E
Sbjct: 699 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 758
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V+++ ++ G +V +Y ILI + +D+A LL + G Y
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 818
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ A F E+ G P+ Y L+ + EA L +
Sbjct: 819 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 878
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L +++ DG+ G+ + A +
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDL 905
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
L+ L+ A N+M+ + P FN L+ +I K+ + + + G DV
Sbjct: 21 LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV 80
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T I+I ++ +D AF L +++ GH P + + +I+G G+ +A F +
Sbjct: 81 YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 140
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + + EA N EM G++P ++ + GL
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 195
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 13/196 (6%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V L+ GL KMI +G PD+ T+NSLI +C E +
Sbjct: 646 GFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCNLCEWKHV 692
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + +V + ++ A+ K GMI A ++ +++ G P Y ++ G
Sbjct: 693 TTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 752
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R + D+A F + KG PN Y LI + R +A L +M+ GL
Sbjct: 753 HCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 812
Query: 185 SRCFDLVTDGLKNCGK 200
+ ++ + GL + G+
Sbjct: 813 TVTYNTLIHGLCHVGR 828
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + L+ GL + G L+ A + ++M+ G PDL T+ L++ +CK+
Sbjct: 804 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 863
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + ++ AD+ Y I I + +AG ++ A L NL G P Y
Sbjct: 864 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNI 923
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
+I G +RG D+A F ++
Sbjct: 924 MIHGLCKRGLLDEANKLFRKM 944
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +++ L + ++ A + K++K G PD TF +LI +C G+
Sbjct: 71 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K + EAF + ++ G +P Y
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + ++ +E+ P+ T++ + G EA + + M G
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + DG + D+A K+
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKV 277
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 15/196 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P V ++++ GL G L A ++ ++M K G P+ T+N + ++ E
Sbjct: 421 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 480
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
+E+ + G DVST +L+ +S G+ D++ + + P
Sbjct: 481 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL-DQSVKQILCKPSSSSRPSGTQMRS 539
Query: 114 FPSLYAPIIKGAFRR-----GQFDDAFCFFSEIKIKGHPPNRPV-YTTLITMCGRGGRFV 167
P L+ + DDA F+ + + HPP V +T L+T + +
Sbjct: 540 LPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRM-LHMHPPPSTVDFTKLLTSIAKMKHYS 598
Query: 168 EAANYLMEMTEMGLTP 183
+ +M G+ P
Sbjct: 599 TVLSLSTQMDSFGIPP 614
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 80/205 (39%), Gaps = 17/205 (8%)
Query: 6 FNPPVRGRDL--LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+PP D L+ + + + + +M G PD+ T N LI + C + +
Sbjct: 575 MHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGY 634
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + KLG DV TY L+ + K ++ G +P Y +I
Sbjct: 635 AFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIH 681
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ +E+ PN V++T++ + G A + + M + G+ P
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIE 208
+ + DG +C + ++ E ++
Sbjct: 742 DVVTYTALMDG--HCLRSEMDEAVK 764
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++V AG E+A +V+ M+ +G P + T+NS+++ +C+SG + E+
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 248
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV ++ ILI + G I+EA ++ + G P ++ +I R
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
RG+ D A + E++ G P+ +YT +I R G +A EM G P
Sbjct: 309 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 368
Query: 188 FDLVTDGL 195
++ + +GL
Sbjct: 369 YNTLLNGL 376
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ GL L A+ ++N+M ++G PDL TF +LI C G+++ +++
Sbjct: 364 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 423
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP--FPS--LYAPIIK 123
+ ++ D+ TY LI + + G +D+A ++L +D H+ FP+ Y+ +I
Sbjct: 424 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA----NDLWDDMHSREIFPNHVTYSILID 479
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+GQ +DAF F E+ KG PN Y ++I R G + +L +M ++P
Sbjct: 480 SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP 539
Query: 184 ISRCFDLVTDG-LKNCGKHDLAEKIEQLE 211
++ + G +K HD + + +E
Sbjct: 540 DLITYNTLIHGYIKEDKMHDAFKLLNMME 568
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + +++GL +G + A ++ +M G PD+ +F LI C+ GE
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++Y + G D+ ++ LI ++ G +D A L + G P +Y
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G DA E+ G P+ Y TL+ + R ++A L EM E G
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + G GK D A ++
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQL 423
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P VR +L+ G G +E A ++ +M +G PDL +F+ LI + G+
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D Y ++I +AG++ +A R+ +V G P Y
Sbjct: 312 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 371
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + DA +E++ +G PP+ +TTLI G+ +A M
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + DG+ G D A +
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDL 458
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + L+ G G L+ A Q+ + M+ Q PD+ T+N+LI+ +C+ G+
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + TY ILI + + G +++AF L ++ G P Y
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG R G F ++ + P+ Y TLI + + +A L M +
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Query: 181 LTPISRCFDLVTDGL 195
+ P ++++ +G
Sbjct: 572 VQPDVVTYNMLINGF 586
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++V A + ++++M K+ PD+ T N +++ ++G+ E + + S+
Sbjct: 160 NIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 219
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + TY ++ + ++GM D+A+ + + + G P + +I G R G+ ++
Sbjct: 220 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE 279
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + E++ +G P+ ++ LI + R G+ A YL EM GL P + +V
Sbjct: 280 ALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIG 339
Query: 194 GLKNCG 199
G G
Sbjct: 340 GFCRAG 345
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ G AG + A ++ ++M+ G PD+ T+N+L+ +CK + + + +
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+ T+ LI G +D+A +L ++ P Y +I G R+G D A
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ ++ + PN Y+ LI G+ +A +L EM G+ P ++ + G
Sbjct: 456 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 515
Query: 195 LKNCGKHDLAEKIEQ 209
G +K Q
Sbjct: 516 YCRSGNVSKGQKFLQ 530
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ G +E A +++MI +G P++ T+NS+I+ C+SG V + +
Sbjct: 476 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 535
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
D+ TY LI K + +AF+LL+ + ++ P Y +I G G +A
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F ++ KG P+R Y ++I G EA EM + G P
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG+ A + S+ + T N ++ CK+ E + + + K DV T
Sbjct: 134 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 193
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ +++ A +AG + A L+ ++V G P Y ++KG R G +D A+ F E+
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
G P+ +T LI R G EA EM G+ P F + GK D
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313
Query: 203 LA 204
A
Sbjct: 314 HA 315
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + + +++G +G + ++ + KM+ PDL T+N+LI K +
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K DV TY +LI S G + EA + + G P Y
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 616
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+I G G +AF E+ +G P+
Sbjct: 617 MINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + + L+ G+ G L+ A + + M + P+ T++ LI++ C+ G+
Sbjct: 427 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 486
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + G ++ TY +I ++G + + + L ++ + +P Y
Sbjct: 487 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 546
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DAF + ++ + P+ Y LI G EA +M G
Sbjct: 547 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 606
Query: 181 LTP 183
+ P
Sbjct: 607 IEP 609
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ + P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P +R + ++ + C K D+ +
Sbjct: 383 LKPDARTYTMIINEF--CKKGDVWK 405
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +K PN +TTLI + GR A +M L P ++ + GL
Sbjct: 233 KLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++ ++ + G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKG 312
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI K G +D AF ++++ Y +I G + G+ DA
Sbjct: 313 LQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ G P+ YT +I + G + + L EM G P ++++ +G
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A +L ++ P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KITYTTLIDGC--CKEGDLDTAFEH 339
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 308 MSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G L +G+L A + + +T ++E + K + Y + + G
Sbjct: 78 LITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM L P F + DG
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + LV GL+N+G LE+A+++++ M + +L T+ +LI+ +G
Sbjct: 44 MKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGR 103
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C +++ + G + TY LI + G+ EA L + G Y
Sbjct: 104 LQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNI 163
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I +RG +D E+ KG PP++ Y TL+ + + FV+A L EMTE G
Sbjct: 164 AIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAG 223
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P ++++ L + K + QL +L+S
Sbjct: 224 YRPNIWTYNIM---LSSARKEQSVAEATQLFENLKS 256
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ Y A +++ +M + G P++ T+N ++ + K
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ ++ G ++ TY ++ + G+ EA +L ++E G P Y+
Sbjct: 244 VAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSG 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G + +A F +++ G P+ +YT L+ G+ GR EA EMT+ G
Sbjct: 304 LIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEG 363
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + ++ N G+
Sbjct: 364 FVPDGITYGILVRAFANAGR 383
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG +P + L+QG G + A ++ ++M G D+ T+N I K G
Sbjct: 114 MKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGL 173
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D TY L+ +K +A +L + E G+ P Y
Sbjct: 174 LEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNI 233
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ A + +A F +K KG PN Y+ ++++ GR G + EAA EM E G
Sbjct: 234 MLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAG 293
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
P C + +++ G H + ++
Sbjct: 294 CIP---CIIAYSGLIESYGHHGMYQE 316
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G LE ++++++M +G PD T+N+L++ K E+ + + G ++ TY
Sbjct: 172 GLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTY 231
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I++ + K + EA +L NL G P Y+ ++ R G + +A + E+
Sbjct: 232 NIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIE 291
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G P Y+ LI G G + EA +M + G+ P ++ + + D G+
Sbjct: 292 AGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCRE 351
Query: 204 AE 205
AE
Sbjct: 352 AE 353
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 67 MYYSVCKLGSCADVSTYKILIPA-VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++Y + K G A V TY ++I + + +D A RLL + E G P LY ++ G
Sbjct: 4 LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G+ + A ++K N YT LI GR + EM + G +P S
Sbjct: 64 VNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNS 123
Query: 186 RCFDLVTDG 194
++ + G
Sbjct: 124 WTYNALIQG 132
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L++ + G + A M K G PD + + +L++ K+G
Sbjct: 289 MIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGR 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMI 96
+Y+ + K G D TY IL+ A + AG +
Sbjct: 349 CREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
>gi|224576649|gb|ACN56998.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L GK D A
Sbjct: 129 CYNALIDALTKHGKVDEA 146
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ D+A F + + +G YT LI+ + R A M +
Sbjct: 132 ALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEXALKLWDMMID 191
Query: 179 MGLTP 183
G+TP
Sbjct: 192 KGITP 196
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEE 155
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|255539453|ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549906|gb|EEF51393.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 475
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+P ++L+ L +A +++N M + G DP + F +LI+ + ++G
Sbjct: 285 MGRSGFSPDFHTYNILLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGN 344
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C + + K G DV Y ++I AG +++A + ++ G P Y
Sbjct: 345 LDACNYFFDEMIKNGFVPDVVCYTVMITGYIVAGELEKAREIFDEMIARGQLPNVFTYNS 404
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+F++A C E+ +G PN VY TL+ G+ EA + EM E G
Sbjct: 405 MIRGLCMAGKFEEARCMLKEMGSRGCKPNFLVYNTLVNNLRNAGKLSEAREVIKEMAENG 464
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P ++L+ G L +++++M + G PD T+N L+ + K +
Sbjct: 253 EGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNILLHVLGKGNKPIA 312
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + ++G + + LI +S+AG +D ++++G P Y +I
Sbjct: 313 ALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDEMIKNGFVPDVVCYTVMIT 372
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ + A F E+ +G PN Y ++I G+F EA L EM G P
Sbjct: 373 GYIVAGELEKAREIFDEMIARGQLPNVFTYNSMIRGLCMAGKFEEARCMLKEMGSRGCKP 432
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++ + + L+N GK A ++
Sbjct: 433 NFLVYNTLVNNLRNAGKLSEAREV 456
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS---DPDLETFNSLIETICK 57
M + GF R ++L+ AG A+++V + IK + P ++N+++ ++
Sbjct: 180 MVENGFPTTARTFNILICTCGGAGL---ARKVVERFIKSKTFNYRPFKHSYNAILLSLLA 236
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
E + ++ + G C D TY IL+ A + G + RLL + G +P
Sbjct: 237 IREYKLIEWVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHT 296
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EM 176
Y ++ + + A + +K G P+ +TTLI R G ++A NY EM
Sbjct: 297 YNILLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGN-LDACNYFFDEM 355
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ G P C+ ++ G G+ + A +I
Sbjct: 356 IKNGFVPDVVCYTVMITGYIVAGELEKAREI 386
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ N G + A+ + M + G PD+ T+ L++T K
Sbjct: 240 MRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNR 299
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G+ ++S+Y +L+ A ++ G I++A + + E G P Y+
Sbjct: 300 LDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSI 359
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G++D+ F E+K+ P+ Y TLI + G GG F E +M E
Sbjct: 360 LLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEEN 419
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G HD A+KI
Sbjct: 420 VEPNMETYEGLIFACGKGGLHDDAKKI 446
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +L+ G + +++ +M ++PD T+N+LI+ + G
Sbjct: 345 MQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGY 404
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V +++ + + ++ TY+ LI A K G+ D+A ++L ++ E G P Y
Sbjct: 405 FKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTG 464
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + +++A + + G P Y TLI M RGG + E L++M + G
Sbjct: 465 VIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFG 524
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ F+ V +G + G+ + A K
Sbjct: 525 VARERDSFNGVIEGFRQGGQFEEAIK 550
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P + LV L+ +++ +M G+ P++ ++N L+E + G
Sbjct: 275 MNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGN 334
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G + TY IL+ K G DE L + P + Y
Sbjct: 335 IEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNT 394
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F + F ++ + PN Y LI CG+GG +A L+ M+E G
Sbjct: 395 LIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKG 454
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S+ + V + ++ A
Sbjct: 455 MIPSSKAYTGVIEAYGQAAMYEEA 478
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + ++L++ G +E A + M + G P+ ET++ L+ K G
Sbjct: 310 MASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGR 369
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + D +TY LI + G E L H++ E+ P Y
Sbjct: 370 YDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEG 429
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G DDA + KG P+ YT +I G+ + EA L M EMG
Sbjct: 430 LIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMG 489
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + G + E I
Sbjct: 490 SKPTIETYNTLIYMFARGGLYKETEAI 516
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M +G PD+ T+N+L+ G + ++ ++ + G D++TY L+ K
Sbjct: 239 EMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLN 298
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D+ LL + G+ P S Y +++ R G +DA F ++ G PN Y+
Sbjct: 299 RLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYS 358
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK--------HDLAEK 206
L+ + G+ GR+ E +EM P + ++ + D G HD+AE+
Sbjct: 359 ILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEE 418
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 1/197 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ L G LE + +M G + ++ +LI + ++G+ E +E+ + K
Sbjct: 148 IMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKE 207
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFR-LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ TY +I + ++ G+ E L + +G P Y ++ RG D+
Sbjct: 208 RVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDE 267
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F + G P+ YT L+ G+ R + + L EM G P ++++ +
Sbjct: 268 AEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLE 327
Query: 194 GLKNCGKHDLAEKIEQL 210
G + A + +L
Sbjct: 328 AYARIGNIEDATGVFRL 344
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 83/188 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ P + + L+ G + AK+++ M ++G P + + +IE ++
Sbjct: 415 MAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAM 474
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + ++ ++GS + TY LI ++ G+ E +L + + G +
Sbjct: 475 YEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNG 534
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + GQF++A + E++ P+ ++++ G E+ E+ G
Sbjct: 535 VIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASG 594
Query: 181 LTPISRCF 188
+ P C+
Sbjct: 595 ILPNVMCY 602
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 11/174 (6%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++G G E A + +M K PD T +++ C +G V+ VE + + G
Sbjct: 535 VIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASG 594
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V Y +++ +K+ +EA+ LL ++ + + + +IK G FDD
Sbjct: 595 ILPNVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQVIGQMIK-----GDFDDDS 649
Query: 136 CF------FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ F ++ +G Y TL+ G+ A L E T+ G P
Sbjct: 650 NWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVLGEATKRGHFP 703
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 61/141 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P + + L+ G + + ++ KM G + ++FN +IE + G+
Sbjct: 485 MNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQ 544
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ Y + K D T + ++ AG++DE+ + G P Y
Sbjct: 545 FEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCM 604
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
++ + ++++A+ E+
Sbjct: 605 MLAVYAKSDRWNEAYELLDEM 625
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLL 103
L F + + + G+ + + ++ + + C + Y I+I + + G++++ +
Sbjct: 107 LNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIF 166
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ G + Y +I R G+++ + +K + P+ Y T+I C RG
Sbjct: 167 EEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARG 226
Query: 164 GRFVEA-ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G E EM G+ P ++ + N G D AE +
Sbjct: 227 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMV 271
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + + L+ G + + A +V +M++ G PD TFN+LI + +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D+ TY I++ + K G ID A LL + + P +Y
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II +DA F+E+ KG PN Y +LI GR+ +A+ L +M E
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + D GK AEK+
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKL 348
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G L+ G A ++A+ + +M+ G PD+ T++ L++ +C +G+
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++ + + D+ TY I+I + KAG +++ + L +L G P Y
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R+G ++A F E+K +G P+ Y TLI R G +A + EM
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Query: 181 LTPISRCFDLVTDGLKN 197
+ LVT+ L +
Sbjct: 602 FVGDASTIGLVTNMLHD 618
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + L++ L N G A ++++ MI++ +P++ TF++LI+ K G+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++Y + K D+ TY LI +DEA + ++ P Y
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + D+ F E+ +G N YTTLI + A +M G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ DGL N GK + A
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETA 485
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V L+ + G L A+++ ++MIK+ DPD+ T++SLI C
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M+ + +V TY LI KA +DE L + + G Y
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLME-MTE 178
+I G F+ + D+A F ++ G P+ Y+ L+ +C G VE A + E +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK--VETALVVFEYLQR 494
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
+ P ++++ +G+ GK
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGK 516
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 36/247 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + L+ G L+ AK M MI + P++ T+N+LI+ CK+
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 61 VEFCVEMYYSVCKLGSCA-----------------------------------DVSTYKI 85
V+ +E++ + + G D+ TY I
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + G ++ A + L P Y +I+G + G+ +D + F + +KG
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD-LVTDGLKNCGKHDLA 204
PN YTT+++ R G EA EM E G P S ++ L+ L++ K A
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 205 EKIEQLE 211
E I ++
Sbjct: 592 ELIREMR 598
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V + ++ L N + A + +M +G P++ T+NSLI +C G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +V T+ LI A K G + EA +L +++ +P Y+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F + K PN Y TLI + R E EM++ G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L + + + G + D A+ + + VS
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++V GL G ++ A ++ KM + +P + +N++I+ +C
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ + G +V TY LI + G +A RLL +++E NP ++
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
+I + G+ +A + E+ + P+ Y++LI
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 4/193 (2%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
LN L+ A + M+K P + F+ L+ I K + + + + + LG ++
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
TY ILI + + A +L +++ G+ P ++ G + DA +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ G+ P+ + TLI R R EA + M G P + +V +GL G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 201 HDLA----EKIEQ 209
DLA +K+EQ
Sbjct: 237 IDLALSLLKKMEQ 249
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+M G +L T++ LI C+ ++ + + + KLG D+ T L+
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
I +A L+ +VE G+ P + +I G FR + +A + +KG P+ Y
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 155 TLIT-MCGRGGRFVEAANYLMEMTEMG-LTPISRCFDLVTDGLKN 197
++ +C RG ++ A L++ E G + P ++ + D L N
Sbjct: 226 IVVNGLCKRGD--IDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
>gi|359495268|ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Vitis vinifera]
Length = 582
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 95/191 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV+ + + A+ ++++M G P+ +T+N L+ ++CK+ + + + +
Sbjct: 373 NILVREMCRKCNFKEARDLLDEMRLFGCRPNAKTYNYLLSSLCKNNRDDEACNVLEEMQE 432
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D T++I I + G +D A + L +V G P + +A IKG F ++++
Sbjct: 433 AGCPPDALTFEIFIYYTYRLGKLDFAIKFLDQMVSRGLEPRLTTHAAFIKGYFHSRRYEE 492
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ + + + P+ +Y+ L ++ R G + A L+EM E GL P + V +
Sbjct: 493 AYEYVVDSGVTYKWPSNMIYSLLASLHQRNGNLISAQKILIEMIEKGLKPNFSVYKRVLE 552
Query: 194 GLKNCGKHDLA 204
L G+ DLA
Sbjct: 553 HLDKSGREDLA 563
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V LV G AG LE +K++ N+M+ QG P+L FN LI+ +CK G+
Sbjct: 88 MKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGK 147
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG--HNPFPSLY 118
V ++ + G D+ TY LI K G + A +L ++ G HN Y
Sbjct: 148 VIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEIS--Y 205
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + + ++A ++E+ G PN Y+TL+T + G+ +A M
Sbjct: 206 TILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKA 265
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
G++ S + + DGL C L E +E
Sbjct: 266 SGISVDSCIYVIFLDGL--CKNGVLFEAME 293
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + ++L+ L G + AK+++ I++G DL T+NSLI+ CK G+
Sbjct: 123 MVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGD 182
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ S+ G + +Y ILI K ++EA L + + + G P Y+
Sbjct: 183 LSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYST 242
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA F +K G + +Y + + G EA E+
Sbjct: 243 LLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYN 302
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ + DGL GK ++A
Sbjct: 303 FKLDFESYSRLIDGLCKAGKVEIA 326
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL G+ + AK++ +M QG P++ +++SL+ C +G++E ++ +
Sbjct: 67 IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ 126
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G ++ + +LI + K G + EA +LL ++ G Y +I G + G A
Sbjct: 127 GVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSA 186
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + KG N YT LI + + EA N EM ++G P + + + G
Sbjct: 187 RKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTG 246
Query: 195 LKNCGKHDLAEKI 207
L GK A K+
Sbjct: 247 LLQTGKVGDANKL 259
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G L SA+++ M +G + + ++ LI CK +VE + +Y + ++G
Sbjct: 173 LIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVG 232
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY L+ + + G + +A +L + G + +Y + G + G +A
Sbjct: 233 KRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAM 292
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+K + Y+ LI + G+ A + ++++ GL P +++ G
Sbjct: 293 ELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGF 352
Query: 196 KNCGKHD----LAEKIEQLE 211
+ D L EK+E++E
Sbjct: 353 CRVEQVDKANILFEKMEKME 372
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++L L N + + ++++G PD+ T+N+LI+ +C+
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +C I+I + K G DEA + + G P Y+
Sbjct: 61 I-----------SVATC-------IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +++ F+E+ +G PN + LI + + G+ +EA L + G
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRG 162
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + DG G A K+
Sbjct: 163 IILDLVTYNSLIDGFCKIGDLSSARKL 189
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V+ L+ GLL G + A ++ M G D + ++ +CK+G
Sbjct: 228 MPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGV 287
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ + D +Y LI + KAG ++ A+ L ++G P
Sbjct: 288 LFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNI 347
Query: 121 IIKGAFRRGQFDDAFCFFSEIKI---KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G R Q D A F +++ G P+ Y TL+ + E N L +M
Sbjct: 348 MIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 20/176 (11%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G PDL T N L +C V + + + G D+ TY LI + + I A
Sbjct: 5 GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
II G + G D+A F E+K +G PN Y++L+
Sbjct: 65 ------------------TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
G+ E+ EM + G+ P F+++ D L C + + E + LEV+++
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDIL--CKEGKVIEAKKLLEVTIQ 160
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK---QGSDPDLETFNSLIETICK 57
+S +G P V ++++ G ++ A + KM K G PD+ T+N+L+ C+
Sbjct: 333 LSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCE 392
Query: 58 SGEVEFCVEMYYSVCK 73
S ++E V + + + K
Sbjct: 393 SNKLEEVVNLLHKMFK 408
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 4/203 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKSGEVE 62
GF P ++ + L G + ++ MI+ G + D+ET LI+ C +V
Sbjct: 159 GFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVF 218
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E+ V + G C D + + LI K D +LH ++ NP Y II
Sbjct: 219 NGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEII 278
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G +R + D+AF F+++K +G+ P+R +YTT+I G EA EM + GL
Sbjct: 279 NGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLV 338
Query: 183 PISRCFDLVTDGLKNCGKHDLAE 205
P ++++ G C D AE
Sbjct: 339 PNEYTYNVMIYGY--CKVRDFAE 359
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D+G+ P +++G + G L A+++ +MI++G P+ T+N +I CK +
Sbjct: 297 LKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRD 356
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++Y +C G +V +Y +I + G DEA L H + G Y
Sbjct: 357 FAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNS 416
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + G+ A +++ I+G P+ +T LI + G A L +M +
Sbjct: 417 LIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRH 476
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L PI+ D + GL G D A+ +E L
Sbjct: 477 LEPIASTHDYMIIGLSKKG--DFAQGMEWL 504
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
NP + ++ GLL + A ++ N + +G PD + ++I+ C G + +
Sbjct: 268 NPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARK 327
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+++ + + G + TY ++I K EA +L ++ G+ Y+ +I G +
Sbjct: 328 LWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLY 387
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
G+ D+A F E+ KG + Y +LI + G +A N L ++ GL P
Sbjct: 388 LHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVS 447
Query: 187 CF 188
F
Sbjct: 448 SF 449
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G N V L++ + + +++ +++++G D FN+LI CK + +
Sbjct: 196 GVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRV 255
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + + + TY+ +I + K DEAFR+ ++L + G+ P +Y +IKG
Sbjct: 256 SEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKG 315
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G +A + E+ KG PN Y +I + F EA +M G
Sbjct: 316 FCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAEN 375
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + GL GK D A
Sbjct: 376 VVSYSTMISGLYLHGKTDEA 395
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ V ++ GL G + A + ++M ++G DL ++NSLI+ +C+ GE
Sbjct: 367 MCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGE 426
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G VS++ LI + K G + A RLL ++ + P S +
Sbjct: 427 LAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDY 486
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
+I G ++G F + ++ PN + LI R R
Sbjct: 487 MIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENR 531
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G + ++++ MI +P + T+ +I + K + + ++ + G
Sbjct: 242 LINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRG 301
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y +I G++ EA +L +++ G P Y +I G + F +A
Sbjct: 302 YFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEAR 361
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ +G+ N Y+T+I+ G+ EA + EM+ G+ ++ + GL
Sbjct: 362 KLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGL 421
Query: 196 KNCGKHDLAE 205
C + +LA+
Sbjct: 422 --CQEGELAK 429
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 13/209 (6%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL----ETFNSLIETICKSGE 60
GF P + L L++AG +++AK ++ PD ++ + + ++G
Sbjct: 92 GFKPDQSSCNALFDALVDAGAVKAAKSLLEY-------PDFVPKNDSLEGYVRLLGENGM 144
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED--GHNPFPSLY 118
VE +++ S+ K+G S++ + + A K G D ++L ++E G N
Sbjct: 145 VEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETV 204
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+IK + + + ++ KG + V+ LI + ++ + L M
Sbjct: 205 GCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIA 264
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M P + + +GL K+D A ++
Sbjct: 265 MKCNPSIYTYQEIINGLLKRRKNDEAFRV 293
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL +E A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + +DA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K G P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +++A L ++ +G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319
Query: 194 G 194
G
Sbjct: 320 G 320
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YVP 414
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ + ++M +G PD T+ +LI+ CK G
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGH 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T +IE + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + G P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + LV GL G + A ++++M++ G P+ T+ ++ +CKSG+
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + + D Y I+I + K G +D AF L + + G Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G++DD ++ + PN ++ LI + G+ EA L EM + G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P + ++ + DG C ++ L E I+ +++
Sbjct: 364 IAPNTITYNSLIDGF--CKENRLEEAIQMVDL 393
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF + + L+ G NAG + +++ MIK+ P++ TF+ LI++ K G+
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G + TY LI K ++EA +++ ++ G +P +
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + DD F E+ ++G N Y TL+ + G+ A EM
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ DGL + G+ + A +I
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEI 495
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G LE A QMV+ MI +G DPD+ TFN LI CK+
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + G A+ TY L+ ++G ++ A +L +V P Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F +I+ + +Y +I + +A + + G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ +R ++++ L C K L++
Sbjct: 539 VKLDARAYNIMISEL--CRKDSLSK 561
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL G L++A + N+M +G D+ T+N+LI C +G + ++ + K
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V T+ +LI + K G + EA +LL +++ G P Y +I G + + ++A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ KG P+ + LI + R + EM+ G+ + ++ + G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 195 LKNCGKHDLAEKIEQLEVSLR 215
GK ++A+K+ Q VS R
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRR 468
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + ++L+ G A ++ ++ +M +G + T+N+L++ C+SG+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + D+ +YKIL+ + G +++A + + + +Y
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA+ F + +KG + Y +I+ R +A +MTE G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 181 LTPISRCFD-LVTDGLKNCGKHDLAEKIEQLEVS 213
P ++ L+ L + AE IE+++ S
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 95/242 (39%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + +++ L A + K++K G +PD FN+L+ +C
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E+ + ++G + T L+ + G + +A L+ +VE G P Y P
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 121 -----------------------------------IIKGAFRRGQFDDAFCFFSEIKIKG 145
II G + G D+AF F+E++IKG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
+ Y TLI GR+ + A L +M + ++P F ++ D GK A+
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 206 KI 207
++
Sbjct: 354 QL 355
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P ++ + +G A +++ KM ++ D ++ +I+ +CK G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G AD+ TY LI AG D+ +LL ++++ +P ++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A E+ +G PN Y +LI + R EA + M G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
P F+++ +G C + + + +E E+SLR V
Sbjct: 399 CDPDIMTFNILINGY--CKANRIDDGLELFREMSLRGV 434
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 35/198 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + LVQG +G LE AK++ +M+ + PD+ ++ L++ +C +GE
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL----------------- 103
+E +E++ + K D+ Y I+I + A +D+A+ L
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 104 ------------------HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+ E+GH P Y +I+ A E+K G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 146 HPPNRPVYTTLITMCGRG 163
P + +I M G
Sbjct: 609 FPADVSTVKMVINMLSSG 626
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 75/197 (38%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L + E + +M +G + T + +I C+ ++ +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ KLG D + L+ + + EA L+ +VE GH P ++ G
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DA + G PN Y ++ + + G+ A L +M E + +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 188 FDLVTDGLKNCGKHDLA 204
+ ++ DGL G D A
Sbjct: 266 YSIIIDGLCKDGSLDNA 282
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++++GL + +E A + M K G D T+ L+ CK+G + + + +
Sbjct: 63 NIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQ 122
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D Y +I A+ K +++A +L+ ++ G P +Y +IKG + DD
Sbjct: 123 KGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDD 182
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ PPN Y+ LI +G RF EA + + EM E GL P + L+
Sbjct: 183 AVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMK 242
Query: 194 GL 195
GL
Sbjct: 243 GL 244
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L LE A ++N MI+ G P+ +N+LI+ + + + + V ++ +
Sbjct: 135 MINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTD 194
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+++TY ILI + K EA+ L+ ++E G NP Y+ ++KG + + A
Sbjct: 195 CPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMAL 254
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++++ KG P+ ++ LI G+ A + ++M P
Sbjct: 255 QLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAP 302
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF +LV G GY+ + ++ ++G D ++++I +CK +
Sbjct: 85 MTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINALCKESK 144
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + + G + Y LI + A D+A R+ + P + Y+
Sbjct: 145 LEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSI 204
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F +A+ E+ KG P+ Y+ L+ G + A ++T+ G
Sbjct: 205 LIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKG 264
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + +++ GL + GK LA
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQLA 288
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG NP V LL++GL +E A Q+ N++ K+G PD++ N LI +C G+
Sbjct: 225 MLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + + ++ T L+ K G + A + ++++ P Y
Sbjct: 285 TQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNELQPDIISYNI 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
+KG + DA F + K P +
Sbjct: 345 TLKGLCSCNRISDAIWFLHDAVRKKIIPTK 374
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L++GL+ A + A ++ +M P++ T++ LI+ +CK
Sbjct: 155 MIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGER 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V TY +L+ + ++ A +L + + + G P ++
Sbjct: 215 FGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNI 274
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ A + ++ PN TL+ + G A + +
Sbjct: 275 LIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNE 334
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P +++ GL +C +
Sbjct: 335 LQPDIISYNITLKGLCSCNR 354
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V+ +LV+G + G + A M N M+ +G P ++N LI +C G+
Sbjct: 288 MVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGD 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + K DV TY LI SKAG +D A + +++ G P +Y
Sbjct: 348 LKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTN 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMC--GRGGRFVEAANYLMEMT 177
++ ++ FD A ++ ++ PPN + TLI ++C GR GR A N M
Sbjct: 408 MVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGR---ALNVFHGMR 464
Query: 178 EMGLTPISRCFDLVTDGL 195
G P R ++ + GL
Sbjct: 465 RYGCPPNDRTYNELLHGL 482
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P ++L++GL + G L+ A + + M K PD+ T+++LI+ K+G+
Sbjct: 323 MVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGD 382
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G +V Y ++ + K M D+A L+ + + P +
Sbjct: 383 LDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNT 442
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G+ A F ++ G PPN Y L+ R G +A L EM G
Sbjct: 443 LIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHG 502
Query: 181 L 181
Sbjct: 503 F 503
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 6/196 (3%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P VR + L+ LL + + + + M K G +P++ T+N LI+ +C++ V M
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D ++ +I A+ K +DEA +L + P + Y ++
Sbjct: 185 LDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVVHALCG 239
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ + + F E+ +G P+ YT+++ + A L M G P +
Sbjct: 240 QFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQT 299
Query: 188 FDLVTDGLKNCGK-HD 202
F ++ G + GK HD
Sbjct: 300 FTVLVKGFFDDGKVHD 315
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+V++M+ +G PD + S++ CK+ E+ + + G +V T+ +L+
Sbjct: 249 VVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFF 308
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G + +A + + +V +G P Y +I+G G A FS + P+
Sbjct: 309 DDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVR 368
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
Y+TLI + G A + +MT G P
Sbjct: 369 TYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKP 400
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 30/237 (12%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +LL++ L + +A++M+++M ++G PD + ++I +CK
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDR 212
Query: 61 VE----FCVEM----------YYSVC----------------KLGSCADVSTYKILIPAV 90
++ EM +++C G D Y ++ A
Sbjct: 213 LDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAF 272
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
KA + A +L +V +G P + ++KG F G+ DA ++ + +G P+
Sbjct: 273 CKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPST 332
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y LI G A M + P R + + DG G D+A I
Sbjct: 333 ISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSI 389
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V +V L + A+ +++KM + P+ TFN+LI ++C G
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G + TY L+ + + G ++A R+L ++ G Y
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + +A + I+G P+ + +I + G AA L M +
Sbjct: 513 TISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVN 572
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ + GL C +H L + + L
Sbjct: 573 CPRNIVAYTSLMSGL--CSQHKLDDAMVYL 600
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS + P + L++ L + G A + + M + G P+ T+N L+ + + G
Sbjct: 428 MSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGN 487
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + M + G + +Y I + + MI EA LL ++ G P +
Sbjct: 488 CEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNA 547
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G A + P N YT+L++ + +A YL++M G
Sbjct: 548 IIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEG 607
Query: 181 LTPISRCFDLVTDGL 195
+ P ++++ G+
Sbjct: 608 ICPNEATWNVLVRGI 622
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF + + + GL ++ A ++ +MI QG PD TFN++I CK G
Sbjct: 498 MLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGN 557
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V M + + ++ Y L+ + +D+A L ++ +G P + +
Sbjct: 558 VRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNV 617
Query: 121 IIKGAF 126
+++G F
Sbjct: 618 LVRGIF 623
>gi|255684956|gb|ACU27967.1| At1g03560-like protein [Arabidopsis thaliana]
gi|255684958|gb|ACU27968.1| At1g03560-like protein [Arabidopsis thaliana]
Length = 193
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 5 MIRKGSKPNVAIYTVLIYGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 64
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +DEA RL + E G Y
Sbjct: 65 VEEALD-YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 123
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + + D+A F + + +G YT LI+ + R EA M +
Sbjct: 124 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMID 183
Query: 179 MGLTPISRCF 188
G+TP + CF
Sbjct: 184 KGITPTAACF 193
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 1 VFENMIRKGSKPNVAIYTVLIYGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 61 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 120
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D K D A
Sbjct: 121 CYNALIDAFTKHRKVDEA 138
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+ N++ G P ++Y +I G + G +DA + +G P+ Y+ ++
Sbjct: 1 VFENMIRKGSKPNVAIYTVLIYGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 106
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG + A ++ +M ++G P++ T N+L++ +CK G V VE + + G
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ +TY LI A I+ A + ++ G +P +Y +I G G+ +DA
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S++K+ G +R Y LI+ + + L EM E G+ P + ++ + L
Sbjct: 519 VVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYL 578
Query: 196 KNCGKHDLAEKI 207
G A K+
Sbjct: 579 GKTGDFATASKV 590
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS------DPDLETFNSLIET 54
M + P V +LV L A ++ A Q+ +++ +G +PD+ FN+LI+
Sbjct: 307 MEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDG 366
Query: 55 ICKSGEVEFCVEMYYSVCKLGSC--ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
+CK G+ E + + + K+G+ + TY LI KAG D A L + E+G
Sbjct: 367 LCKVGKEEDGLSLLEEM-KMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQ 425
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAAN 171
P ++ G + G+ A FF+E+K KG N YT LI+ CG A
Sbjct: 426 PNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN-INRAMQ 484
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGK-HDLAEKIEQLEVS 213
EM G +P + + + GL G+ +D + + +L+++
Sbjct: 485 CFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA 527
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 1/183 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG + A +V+K+ G D +N LI CK ++E E+ + + G
Sbjct: 504 LISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETG 563
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI + K G A +++ ++++G P Y II + D+
Sbjct: 564 VKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGM 623
Query: 136 CFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ PPN +Y LI R A + + +M + P + ++ + G
Sbjct: 624 KIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKG 683
Query: 195 LKN 197
+++
Sbjct: 684 VRD 686
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
RGRD+ + +++ +M K+ P + TF L+ +CK+ ++ ++++
Sbjct: 293 RGRDI-----------KRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDR 341
Query: 71 V------CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYAPIIK 123
+ +G DV + LI + K G ++ LL + + + + P Y +I
Sbjct: 342 LRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLID 401
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G F+ G FD A F ++ +G PN TL+ + GR A + EM GL
Sbjct: 402 GFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKG 461
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ + + CG +++ ++ E L S
Sbjct: 462 NAATYTALISAF--CGVNNINRAMQCFEEMLSS 492
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ L G +A +++ KMIK+G P + T+ ++I C
Sbjct: 559 MEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKN 618
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ ++++ +C + Y ILI A+ + +D A L+ ++ P + Y
Sbjct: 619 VDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYN 678
Query: 120 PIIKGAFRRGQFDDAF 135
I+KG + AF
Sbjct: 679 AILKGVRDKKMLHKAF 694
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 7/179 (3%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++++ +++ G D + N+L+ + + +++ E+ + K V T+ IL+
Sbjct: 265 AWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVN 324
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHN------PFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ KA IDEA ++ L G + P L+ +I G + G+ +D E+K
Sbjct: 325 HLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMK 384
Query: 143 IKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ + PN Y LI + G F A +M E G+ P + + DGL G+
Sbjct: 385 MGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGR 443
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ +VQ L +G + A Q ++ M++ G PD+ T+++ + +C +GE
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGE 595
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + DV + ILI K+ +DEA +++ ++E G P Y
Sbjct: 596 VDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNL 655
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ + A + ++ + P YT+LI GR EA EM E G
Sbjct: 656 MIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG 715
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + +GL+ CG+ + A
Sbjct: 716 CAPNNIAYTAFINGLRKCGRIETA 739
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L G+ ++A ++ +M G P ++ +++ +C SG
Sbjct: 501 MKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGR 560
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V V+ + ++G D+ TY + + G +D+A L ++ + P +
Sbjct: 561 VTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNI 620
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A E+ KG P+ Y +I +C + GR +A +YL +M
Sbjct: 621 LINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEE 680
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + DG + G+ D A K+
Sbjct: 681 KQPTVITYTSLIDGFCSAGRPDEAIKL 707
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L N LE + N+M G P T+NSL IC+ + + +++ + G
Sbjct: 481 LIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNG 540
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ ++ + +G + EA + L +++ G P Y+ + G G+ DDA
Sbjct: 541 HPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDAL 600
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F +I K + P+ + LI + + EA + EM E GL P ++L+ D
Sbjct: 601 HLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMID 658
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKM-------------------IKQGSDPDLETFNSLIET 54
+++++ L++ G +E+A Q++ M I++ + P+ ++FN ++
Sbjct: 390 NVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCG 449
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+CK +++ + + + LG + + LI + ++E + + + + + G P
Sbjct: 450 LCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPS 509
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y + G RR A E++ GHPP T ++ GR EA +L
Sbjct: 510 EFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLD 569
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
M ++G P + +G+ N G+ D A
Sbjct: 570 GMLQIGFLPDIVTYSAAMNGMCNTGEVDDA 599
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ NAG + A + +M + G D +L+ K G+V+ VE+ S+ LG
Sbjct: 217 LLRCYCNAGRPDDANDVFQRMSELGW-VDEHVLTTLMVAFSKWGKVDGAVELLGSMEALG 275
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
T +L+ +K G +D+A + +V G ++Y+ +I+G ++ A
Sbjct: 276 MRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAV 335
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE-MGLTPISRCFDLVTDG 194
F E+K G P+ + +I R G F ++ E E + + +++V +
Sbjct: 336 KLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEE 395
Query: 195 LKNCGKHDLAEKI 207
L +CG+ + A ++
Sbjct: 396 LVHCGEVEAAYQL 408
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V +L++ G +E A ++KM+ + P + T+ SLI+ C +G
Sbjct: 641 MLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGR 700
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH--NPFPSLY 118
+ ++++ + + G + Y I + K G I+ A +V G + F LY
Sbjct: 701 PDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLY 760
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV G G ++ A M KM+ G DL ++ LIE +C+ ++ V+++ +
Sbjct: 285 VLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSS 344
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS-----LYAPIIKGAFRRG 129
G DV K +I A + G F ++ + + S LY +++ G
Sbjct: 345 GVAPDVRLLKKVIEAFCREG----DFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCG 400
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ + A+ + G N V GG +++ + E P S F+
Sbjct: 401 EVEAAYQLLRSMVCGGQAVNNDV---------AGG------AHMLHIRE-DAKPNSDSFN 444
Query: 190 LVTDGLKNCGKHDLAEKIEQLEVSL 214
+V GL K D+A + + +SL
Sbjct: 445 IVVCGLCKVKKLDMALALTKDMISL 469
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 20/203 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF + +L++GL + A ++ +M G PD+ +IE C+ G+
Sbjct: 306 MVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGD 365
Query: 61 VEFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-------- 111
+ L S + V Y +++ + G ++ A++LL ++V G
Sbjct: 366 FAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAG 425
Query: 112 -----------NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
P + ++ G + + D A ++ G ++ LI
Sbjct: 426 GAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHEL 485
Query: 161 GRGGRFVEAANYLMEMTEMGLTP 183
R E +M ++GLTP
Sbjct: 486 CNMDRLEEGYGIFNQMKDLGLTP 508
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P V + ++ L A ++ A ++ +M+K G+ P+ T NSL+ C SG+
Sbjct: 229 MLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGK 288
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ +C+ G DV TY L+ + K G EA ++ ++V+ GH P + Y
Sbjct: 289 PNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGT 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G + G P+ ++ LI + G+ +A +M G
Sbjct: 349 LLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQG 408
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P + + +V D L GK D A
Sbjct: 409 LNPDTVTYGIVMDALCMVGKVDDA 432
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL + A+++ +MI +G P+ FN+L+ +CK G V ++ + ++
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD 513
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI G +DEA +LL +V DG P Y +I G + G+ +DAF
Sbjct: 514 VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAF 573
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ KG P Y+T++ + R A + M + G+ ++++ GL
Sbjct: 574 SLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGL 633
Query: 196 --KNC 198
NC
Sbjct: 634 CQNNC 638
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++G A + +M + G +PD+ T+N+L+ +CK+G
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G + +TY L+ + G + + LL +V +G P ++
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DDA FS+++ +G P+ Y ++ G+ +A + G
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
LTP + F + GL C + D +K E+L V +
Sbjct: 444 LTPDAVVFRNLIHGL--CAR-DKWDKAEELAVEM 474
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G L +++ M++ G PD FN LI T K G+
Sbjct: 334 MVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGK 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + + G D TY I++ A+ G +D+A L+ +G P ++
Sbjct: 394 VDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRN 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R ++D A E+ +G PN + TL+ + G A N M +
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD 513
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + DG GK D A K+
Sbjct: 514 VQRDVITYNTLIDGYCLHGKVDEAAKL 540
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ L G A+++ + M+K+G P+ T+ +L+ G
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGS 358
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G D + ILI +K G +D+A L + G NP Y
Sbjct: 359 LVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGI 418
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
++ G+ DDA F + +G P+ V+ LI +C R ++ +A +EM
Sbjct: 419 VMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR-DKWDKAEELAVEMIGR 477
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
G+ P + F+ + + L G A+ I L V +
Sbjct: 478 GICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP + ++QGL A +AK++ MIK G D+ T+N ++ +C++
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNC 638
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ ++ + + T+ I+I A+ K G DEA L +L+ G P Y
Sbjct: 639 TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWL 698
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++K +G ++ F ++ G N + L+ + G +A YL ++ E
Sbjct: 699 MMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDE 756
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM-YYSVCKLGSCADVST 82
G+L+ A + ++I+ G + TF+ L++ +C +++ + LG +V +
Sbjct: 105 GHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFS 164
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLV-----EDGHNPFPSLYAPIIKGAFRRG-QFDDAFC 136
Y IL+ + +A LLH ++ G+ P Y +I G R G Q D A+
Sbjct: 165 YTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYH 224
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
F ++ +G P+ Y ++I+ + +AA L+ M + G P + + G
Sbjct: 225 LFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYC 284
Query: 197 NCGK 200
+ GK
Sbjct: 285 SSGK 288
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 85/196 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + ++ G G +E A + +M +G +P + T++++++ + ++
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y + K G D+ TY I++ + + D+A R+ NL + + +I
Sbjct: 608 KELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDA 667
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D+A F+ + +G PN Y ++ G E + + + + G T
Sbjct: 668 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAN 727
Query: 185 SRCFDLVTDGLKNCGK 200
SR + + L G+
Sbjct: 728 SRMLNALVGKLLQKGE 743
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ G G ++ A +++ M+ G P+ T+N++I CK+G +E ++ +
Sbjct: 522 NTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMAS 581
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + TY ++ + +A A L +++ G Y I+ G + DD
Sbjct: 582 KGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDD 641
Query: 134 AFCFFSEIK-IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A F + I H NR + +I +GGR EA + + GL P
Sbjct: 642 ALRIFQNLYLIDFHLENR-TFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + L G + +A Q+ +M+ +G D T+N LI+ +CK+G
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI A + G + EA + +V G +P Y
Sbjct: 526 LKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTI 585
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I RRG A+ +F ++ +G PN Y L+ R GR A + EM E G
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645
Query: 181 LTPISRCFDLVTDG 194
L P + L+ DG
Sbjct: 646 LVPNKYTYTLLIDG 659
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + L+ GL G E+A+ ++M +G PDL T+NSLI CK+G
Sbjct: 326 MENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGN 385
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G V TY ILI + G ++ A RL + E+ P Y
Sbjct: 386 LKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTI 445
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ FF E+ KG P+ Y T I+ G A EM G
Sbjct: 446 LMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRG 505
Query: 181 LTPISRCFDLVTDGLKNCG 199
++ + ++++ DGL G
Sbjct: 506 ISSDTVTYNVLIDGLCKTG 524
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + ++L+ GL G L+ A + KM+ G D T+ LI C+ G
Sbjct: 501 MMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGR 560
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G V TY I I + G + A+ ++E+G P Y
Sbjct: 561 LIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNV 620
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G+ + A+ F E+ +G PN+ YT LI + G +V A EM + G
Sbjct: 621 LMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG 680
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P + + G +D + +E +
Sbjct: 681 IHPDHCTHNALFKGFGEGHMYDAVQYLENV 710
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ--GSDPDLETFNSLIETICKS 58
M G P + + L+ AG ++ A ++ M + G P+ T+N +I + +
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
GE+E ++ + +L A TY LI + +++A LL + +G P Y
Sbjct: 280 GELEKAAQLV-DIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G F+ G + A F E++ KG P+ Y +LI + G +A ++
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
GL P ++++ DG G + A ++++
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKE 429
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++L+ G G LE A+++ +M ++ PD+ T+ L+ C +
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV 459
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D Y I A G I AF+L ++ G + Y +I G
Sbjct: 460 RIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDG 519
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G DA+ + ++ G + YT LI GR +EA N M GL+P
Sbjct: 520 LCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSP 578
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 2/173 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL ++E A ++ +M +G P + T+N+LI+ + K+G E + + G
Sbjct: 306 LITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKG 365
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY LI KAG + +A L +L G P Y +I G R G + A
Sbjct: 366 LLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGAR 425
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
E+ + P+ YT L+ + EM GL P CF
Sbjct: 426 RLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP--DCF 476
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 3/191 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ GL G LE A Q+V+ M + T+N LI + VE + +
Sbjct: 270 NVVINGLARKGELEKAAQLVDIM-RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMEN 328
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY LI + K G + A + G P Y +I G + G
Sbjct: 329 EGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQ 388
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A C F ++K G P Y LI R G A EMTE P + ++ +
Sbjct: 389 ALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMN 448
Query: 194 GLKNCGKHDLA 204
G +C +LA
Sbjct: 449 G--SCMVRNLA 457
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
+M + G P ++ N ++ + + + +Y + +LG + TY L+ + KA
Sbjct: 183 QEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKA 242
Query: 94 GMIDEAFRLLHNLVEDGHNPFPS--LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
G +D+A LL ++ P+ Y +I G R+G+ + A +++ +
Sbjct: 243 GRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLS-KKASAF 301
Query: 152 VYTTLITMCGRGGR-FVE-AANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
Y LIT G R FVE A L+EM G+ P ++ + DGL G + A+
Sbjct: 302 TYNPLIT--GLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
AG E A +V +M G PD+ +++S I + G E +E++ + G DV
Sbjct: 150 KAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVI 209
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY I A + G EA LL + G P Y+ +I + GQ+ A E+
Sbjct: 210 TYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREM 269
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K PN Y I C +GGR+ EA + L EM +GL P + V D C K
Sbjct: 270 KAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDA---CSKG 326
Query: 202 D 202
D
Sbjct: 327 D 327
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P R + G + A ++ +M+ + P++ +NS I + K+G+
Sbjct: 94 MPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQ 153
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E V + + +G DV +Y I A + G +EA L ++ G P Y
Sbjct: 154 WEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGS 213
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G++ +A +I G PN Y+++IT C + G++ A + L EM M
Sbjct: 214 AIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMR 273
Query: 181 LTPISRCFDLVTDGLKNCGKH 201
L P ++ D G+
Sbjct: 274 LAPNIITYNAAIDACAKGGRW 294
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G E A +++ +M +G+ PDL ++++I+ K G+ + V + G D +Y
Sbjct: 47 GQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSY 106
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I A ++ G A LL ++ P +Y I + GQ++ A E+
Sbjct: 107 GAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMAT 166
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
G P+ Y++ I+ CGRGGR+ EA +M G+ P D++T G
Sbjct: 167 VGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAP-----DVITYG 212
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V + G E A ++ M G PD+ T+ S I G
Sbjct: 164 MATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGR 223
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + +G +V +Y +I A +K G A LL + P Y
Sbjct: 224 WKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNA 283
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G++ +A E+ G PP+ Y+++I C +G R+ EA + L EM +G
Sbjct: 284 AIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVG 343
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L+P + ++ D G+ A+ +
Sbjct: 344 LSPNAISYNSAIDACAKGGQWKEAKGL 370
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + N G + A ++ K+ G P++ +++S+I K G+
Sbjct: 199 MRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQ 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + ++ TY I A +K G EA LL + G P Y+
Sbjct: 259 WKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSS 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + ++ +A E+ G PN Y + I C +GG++ EA L EM G
Sbjct: 319 VIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAG 378
Query: 181 LT 182
+T
Sbjct: 379 VT 380
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++ G + A + +M +G PD ++ + I + G
Sbjct: 59 MPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGR 118
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + +V Y I + +KAG + A L+ + G P Y+
Sbjct: 119 WKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSS 178
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R G++++A F +++ G P+ Y + I C GGR+ EA + L ++ +G
Sbjct: 179 AISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVG 238
Query: 181 LTP 183
LTP
Sbjct: 239 LTP 241
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D +Y + I A + G ++A RLL + +G P S Y+ +I + GQ+ A
Sbjct: 28 GWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMA 87
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ KG P+ Y I C RGGR+ A + L EM +TP ++ +
Sbjct: 88 VFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINS 147
Query: 195 LKNCGKHDLA 204
G+ ++A
Sbjct: 148 CAKAGQWEIA 157
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
AK+++ +M G P+ +NS I+ + + E V++ + +G DV +Y I
Sbjct: 437 AKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIA 496
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A +K EA +L + G P Y I + G++ A E++ G P
Sbjct: 497 ACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTP 556
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT--DGLKNCGKHD 202
N Y++ I C RGG++ E L EM G+ P D++T + C K+D
Sbjct: 557 NIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVP-----DVITYHALMVTCAKYD 607
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 3/206 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ G + A ++ +M P++ T+N+ I+ K G +
Sbjct: 238 GLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEA 297
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + +G DV +Y +I A SK EA +L + G +P Y I
Sbjct: 298 IDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDA 357
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ GQ+ +A E+ G Y + I C +G ++ EA L EM +GL
Sbjct: 358 CAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTT 417
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ D CGK +L K ++L
Sbjct: 418 VFSYSSAIDA---CGKGNLWIKAKEL 440
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 3/187 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G + A ++ +M G PD+ +++S+I+ K + +++ + +G + +Y
Sbjct: 292 GRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISY 351
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I A +K G EA LL + G Y I + Q+ +A E+
Sbjct: 352 NSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPT 411
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G Y++ I CG+G +++A L EM +GL P C++ D CG+ D
Sbjct: 412 VGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDA---CGRGDQ 468
Query: 204 AEKIEQL 210
E+ L
Sbjct: 469 WEEAVDL 475
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + + G + AK ++ +M G + +NS I K +
Sbjct: 339 MPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQ 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + +G V +Y I A K + +A LL + G P Y
Sbjct: 399 WKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNS 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I R Q+++A E+ G P+ Y++ I C +G ++ EA L EM+ G
Sbjct: 459 AIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAG 518
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P C++ D G+ +A
Sbjct: 519 LAPDLICYNSAIDACSKGGRWKMA 542
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 7/175 (4%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
D +++ I + G+ E V + + G+ D+S Y +I A +K G A L
Sbjct: 32 DQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFL 91
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+ G P Y I R G++ A E+ + PN +Y + I C +
Sbjct: 92 MEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKA 151
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLV--TDGLKNCGKHDLAEKIEQLEVSLRS 216
G++ A + + EM +GL P D++ + + CG+ E+ +L +R+
Sbjct: 152 GQWEIAVSLVKEMATVGLAP-----DVISYSSAISACGRGGRWEEALELFEDMRT 201
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 3/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ + A ++ +M G P+ ++NS I+ K G+
Sbjct: 304 MPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQ 363
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G V Y I A +K EA LL + G + Y+
Sbjct: 364 WKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSS 423
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + + A E+ G PN Y + I CGRG ++ EA + L EM +G
Sbjct: 424 AIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVG 483
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
L+P + + + C K D
Sbjct: 484 LSPDVFSY---SSAIAACAKGD 502
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 70/183 (38%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V G + + + A ++ +M G + +++S I+ K
Sbjct: 374 MPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNL 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + +G + Y I A + +EA LL + G +P Y+
Sbjct: 434 WIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSS 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + Q+ +A E+ G P+ Y + I C +GGR+ A L EM G
Sbjct: 494 AIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAG 553
Query: 181 LTP 183
LTP
Sbjct: 554 LTP 556
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 55/137 (40%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
E A ++ +M G PD+ +++S I K + + + + + G D+ Y
Sbjct: 469 WEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNS 528
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
I A SK G A LL + G P Y+ I R GQ+ + E++ G
Sbjct: 529 AIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSG 588
Query: 146 HPPNRPVYTTLITMCGR 162
P+ Y L+ C +
Sbjct: 589 VVPDVITYHALMVTCAK 605
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K+ G ++ Y IT CGRGG++ +A L EM G P + V D G+
Sbjct: 25 KLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQW 84
Query: 202 DLA 204
+A
Sbjct: 85 KMA 87
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL + A ++ +MI G P+ TF +LI+ CK+G
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGS 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E Y + + G D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 IDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + A + + + + YT LI+ R G+ V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 377 LKPDNGTYTMIINEF--CKKGDV 397
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G + T+ LI K G ID A ++ G +P Y
Sbjct: 222 MNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLK 378
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + +++ K G P + +FN+L+ + G+++ + ++
Sbjct: 140 NILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +++A L ++ +G P + +I G + G D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + E+ +G P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDL 203
G +C + DL
Sbjct: 320 G--SCKEGDL 327
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A + +M++QG PDL T+N+LI +CK G+++ ++ + G
Sbjct: 247 LIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI K G ++ A ++++ Y +I G R GQ DA
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAE 366
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
E+ G P+ YT +I + G + L EM G P
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVP 414
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ + Y + ++++ G L FN L+ CK GE+ ++ + K G
Sbjct: 107 VLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + G P Y+ +I G + + +DA
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ G PN +TTLI + G A EM G +P ++ + GL
Sbjct: 227 ELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CKKGDLKQ 294
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF+P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
II ++G E++ GH P
Sbjct: 387 IINEFCKKGDVKTGSKLLKEMQRDGHVP 414
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 71/189 (37%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E K + Y + + G
Sbjct: 72 LITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G + A + + + G P + ++ G R G D+ F
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLA 204
G DLA
Sbjct: 252 CKTGSIDLA 260
>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
Length = 975
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ +VQ L +G + A Q ++ M++ G PD+ T+++ + +C +GE
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGE 595
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + DV + ILI K+ +DEA +++ ++E G P Y
Sbjct: 596 VDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNL 655
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ + A + ++ + P YT+LI GR EA EM E G
Sbjct: 656 MIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG 715
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + +GL+ CG+ + A
Sbjct: 716 CAPNNIAYTAFINGLRKCGRIETA 739
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L G+ Y ++A ++ +M G P ++ +++ +C SG
Sbjct: 501 MKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGR 560
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V V+ + ++G D+ TY + + G +D+A L ++ + P +
Sbjct: 561 VTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNI 620
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A E+ KG P+ Y +I +C + GR +A +YL +M
Sbjct: 621 LINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEE 680
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + DG + G+ D A K+
Sbjct: 681 KQPTVITYTSLIDGFCSAGRPDEAIKL 707
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKM-------------------IKQGSDPDLETFNSLIET 54
+++++ L++ G +E+A Q++ M I++ + P+ ++FN ++
Sbjct: 390 NVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCG 449
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+CK +++ + + + LG + + LI + ++E + + + + + G P
Sbjct: 450 LCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPS 509
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y + G RR A E++ GHPP T ++ GR EA +L
Sbjct: 510 EFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLD 569
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
M ++G P + +G+ N G+ D A
Sbjct: 570 GMLQIGFLPDIVTYSAAMNGMCNTGEVDDA 599
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ NAG + A + +M + G D +L+ K G+V+ VE+ S+ LG
Sbjct: 217 LLRCYCNAGRPDDANDVFQRMSELGW-VDEHVLTTLMVAFSKWGKVDGAVELLGSMEALG 275
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
T +L+ +K G +D+A + +V G ++Y+ +I+G ++ A
Sbjct: 276 MRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAV 335
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE-MGLTPISRCFDLVTDG 194
F E+K G P+ + +I R G F ++ E E + + +++V +
Sbjct: 336 KLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEE 395
Query: 195 LKNCGKHDLAEKI 207
L +CG+ + A ++
Sbjct: 396 LVHCGEVEAAYQL 408
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 78/215 (36%), Gaps = 35/215 (16%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++V GL L+ A + MI G + FN LI +C +E ++ +
Sbjct: 444 NIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKD 503
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF------------------- 114
LG TY L + + A LL + +GH P+
Sbjct: 504 LGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTE 563
Query: 115 --------------PSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
P + Y+ + G G+ DDA F +I K + P+ + LI
Sbjct: 564 AVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILIN 623
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+ + EA + EM E GL P ++L+ D
Sbjct: 624 GFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMID 658
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V +L++ G +E A ++KM+ + P + T+ SLI+ C +G
Sbjct: 641 MLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGR 700
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH--NPFPSLY 118
+ ++++ + + G + Y I + K G I+ A +V G + F LY
Sbjct: 701 PDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLY 760
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV G G ++ A M KM+ G DL ++ LIE +C+ ++ V+++ +
Sbjct: 285 VLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSS 344
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS-----LYAPIIKGAFRRG 129
G DV K +I A + G F ++ + + S LY +++ G
Sbjct: 345 GVAPDVRLLKKVIEAFCREG----DFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCG 400
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ + A+ + G N V GG +++ + E P S F+
Sbjct: 401 EVEAAYQLLRSMVCGGQAVNNDV---------AGG------AHMLHIRE-DAKPNSDSFN 444
Query: 190 LVTDGLKNCGKHDLAEKIEQLEVSL 214
+V GL K D+A + + +SL
Sbjct: 445 IVVCGLCKVKKLDMALALTKDMISL 469
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 20/203 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF + +L++GL + A ++ +M G PD+ +IE C+ G+
Sbjct: 306 MVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGD 365
Query: 61 VEFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-------- 111
+ L S + V Y +++ + G ++ A++LL ++V G
Sbjct: 366 FAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAG 425
Query: 112 -----------NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
P + ++ G + + D A ++ G ++ LI
Sbjct: 426 GAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHEL 485
Query: 161 GRGGRFVEAANYLMEMTEMGLTP 183
R E +M ++GLTP
Sbjct: 486 CNMDRLEEGYGIFNQMKDLGLTP 508
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E++ + G + T+ LI K GM+D A + ++ G +P Y
Sbjct: 222 VDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G E+ + G P++ YTTLI C + G A + M +
Sbjct: 282 LIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKES 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + + GL G+ D AEK+ E L V L+
Sbjct: 342 IRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLK 378
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ N+M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGM 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + G D+ TY LI + K G + + L+ + +G P Y
Sbjct: 257 VDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF F + + + YT L++ + GR +A EM +G
Sbjct: 317 LIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 377 LKPDNGTYTMIINEF--CKKGDV 397
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+ G ++SA ++ +M+ QG PDL T+N+LI +CK G+
Sbjct: 232 MLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DDA F E+ G P+ YT +I + G A+ L EM G
Sbjct: 352 LVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 HVP 414
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN ++ CK GE+ ++ ++ K G
Sbjct: 107 VLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + G P Y+ +I G + + D+A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ +G PN +TTLI + + G A +M G +P ++ + GL
Sbjct: 227 ELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CKKGDLKQ 294
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ G + A+ + + + K G P + +FN+L+ + G+++ + ++
Sbjct: 140 NIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +DEA L + +++ G P + +I + G D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDS 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ +G P+ Y TLI + G + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G C + DL E
Sbjct: 320 GC--CKEGDLETAFE 332
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P L++GL+ G +E A +++NK+ K G P+L +NS+I ++CK+G+
Sbjct: 321 MIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGK 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G + TY ILI + +D AF + ++E G + Y
Sbjct: 381 LEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNS 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ A F E+ KG P YT+LI+ + G +A EMT G
Sbjct: 441 MINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKG 500
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P + F + GL K A K+ V L+
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G NP +L+ G L+ A NKMI+ G + ++NS+I CK G+
Sbjct: 391 MAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G V+TY LI K G++ +AF+L H + G P +
Sbjct: 451 MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTA 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A F E+ PN Y LI R G A L EM + G
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570
Query: 181 LTPISRCFDLVTDGLKNCGK--------HDLAEKIEQLE 211
L+P + + + GL + G+ +DL K ++L+
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLD 609
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G P ++V+ L AK+++N+ G + T+N I +CKS
Sbjct: 216 LVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKR 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V VE+ S+ + G AD+ TY L+ + + + ++ ++E G+ P + +
Sbjct: 276 VWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSG 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G + AF +++ G PN VY ++I + G+ EA M E G
Sbjct: 336 LIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERG 395
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P + ++ DG K D+A
Sbjct: 396 LNPNDVTYTILIDGFGRRAKLDVA 419
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG + LV GL E +M+++MI+ G P + LIE + K G
Sbjct: 286 LGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGS 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ V KLG ++ Y +I ++ K G ++EA L + E G NP Y
Sbjct: 346 IEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTI 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G RR + D AF +F+++ G Y ++I + G+ A EM + G
Sbjct: 406 LIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKG 465
Query: 181 LTPISRCFDLVTDG 194
L P + + G
Sbjct: 466 LKPTVATYTSLISG 479
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P LV GL AGY+ AK + +M+ + P+ T+ ++ + K G
Sbjct: 705 MIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGN 764
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ ++ + GS A+ TY ILI + G EA +LL ++ G P Y+
Sbjct: 765 MENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYST 823
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I +RG D A + + +G P+R V+ LI C G A +M G
Sbjct: 824 FIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRG 883
Query: 181 LTPISRCF 188
L P +
Sbjct: 884 LKPTQSTY 891
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V L+ G G + A ++ ++M +G P+ TF +LI +C+ +
Sbjct: 461 MVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINK 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + +L + TY +LI + G AF LL +++ G +P Y P
Sbjct: 521 MAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRP 580
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ +A F +++ K + YT L+ + GR EA EM G
Sbjct: 581 LIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRG 640
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L + ++ G N L E + ++
Sbjct: 641 LQMDLVSYAVLISGALNQNDRILFELLREMH 671
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ + GL + + A ++ + ++G DL T+ +L+ +C+ E E +EM + +
Sbjct: 264 NVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIE 323
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
LG + LI + K G I+ AF LL+ + + G P +Y +I + G+ ++
Sbjct: 324 LGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEE 383
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A FS + +G PN YT LI GR + A Y +M E G++ ++ + +
Sbjct: 384 AELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMIN 443
Query: 194 GLKNCGKHDLAE 205
GK +AE
Sbjct: 444 CQCKFGKMKMAE 455
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G +E+A Q+ N M+ QGS + T+N LI C+ G+ + ++ + +G D
Sbjct: 759 LTKEGNMENALQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPD 817
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
TY I K G +D A + +++ G P ++ +I G+ D A +
Sbjct: 818 CITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRN 877
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
++ ++G P + Y +L+ + R +
Sbjct: 878 DMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQ----GSDPDLETFNSLIETICKSGEVEFCVEMYY 69
DL+ +L +G L +++ +++++ G PD + LI+ KSG ++ E +Y
Sbjct: 644 DLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWY 703
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ G + TY L+ + KAG ++EA L ++ P Y + + G
Sbjct: 704 IMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEG 763
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
++A + + ++G N Y LI + G+F EAA L M +G+ P C
Sbjct: 764 NMENALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVP--DCIT 820
Query: 190 LVTDGLKNCGKHDLAEKIEQLEVSLR 215
T + C + ++ ++ E L+
Sbjct: 821 YSTFIYEYCKRGNVDAAMDMWECMLQ 846
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 76/188 (40%)
Query: 12 GRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV 71
G D+L+Q + + +VN M G P++ T ++L+ + + + +E++ ++
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
G D Y +++ + + ++A +++ +G + Y I G + +
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+A + KG + Y TL+ R F + EM E+G P +
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336
Query: 192 TDGLKNCG 199
+GL G
Sbjct: 337 IEGLIKMG 344
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLN-AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M +G P V + ++ G+ +E A ++ +M+ P+ T+ ++I + K
Sbjct: 244 MIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIY 303
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
EV+ C+E++ + K G D Y LI A K +DEA +L + + P +Y
Sbjct: 304 EVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYT 363
Query: 120 PIIKG--AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+I G R+ + D+A F +K + PN Y ++ + GRF EA EM
Sbjct: 364 TLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMF 423
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ +P F ++T G+ +CGK D E+I
Sbjct: 424 KVKCSPNRMTFKVMTMGMIHCGKTDKFERI 453
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 1/207 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
K P V + ++ GL G ++ A + ++ DPD T+++L+ +C++ +E
Sbjct: 142 KTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEA 201
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++Y + + D Y + K +DEA +L +++ G P Y II
Sbjct: 202 AIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIIN 261
Query: 124 GAFR-RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + + + ++A+ F ++ PPN Y T+I + M++ GL+
Sbjct: 262 GVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLS 321
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + K D A+ I Q
Sbjct: 322 PDGYAYHSLIYAFVKVRKLDEAKSILQ 348
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G +P L+ + L+ AK ++ + PD+ + +LI C++ +
Sbjct: 315 MSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARK 374
Query: 61 --VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
V+ + ++ ++ +V TY I++ + K G DEA+++ + + +P +
Sbjct: 375 PRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTF 434
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKG 145
+ G G+ D F ++ KG
Sbjct: 435 KVMTMGMIHCGKTDKFERIFMDMVYKG 461
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G A +E+A+++ ++M K G P++ T N+L++ +CK G + VE + + G
Sbjct: 422 LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY LI A I++A L ++E G +P +Y +I G + G+ D A
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S++K G P+ + LI R + EA L EM G+ P ++ +
Sbjct: 542 FVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601
Query: 196 KNCGKHDLAEKI 207
G A ++
Sbjct: 602 SKTGDFSTAHRL 613
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V + LV G+ G + A + N+M +G + T+ +LI C
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ + + G D Y LI +S+AG +D A +L + E G +P +
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+ + D+A+ E++ G P+ Y TLI+ + G F A + +M + G
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Query: 181 LTP 183
L P
Sbjct: 622 LVP 624
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P L+ GL AG L+ A +++KM + G PD+ +FN LI C+ +
Sbjct: 512 MLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNK 571
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ EM + G D TY LI SK G A RL+ +V++G P Y
Sbjct: 572 LDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGA 631
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G D+A F ++ PPN +Y LI R + A + + +M
Sbjct: 632 LIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVK 691
Query: 180 GLTPISRCFDLVTDGLK 196
G+ P + F+ + GL+
Sbjct: 692 GVKPNTNTFNAMFKGLQ 708
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF+P + ++L+ G L+ A +M+ +M G PD T+N+LI K+G+
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS-LYA 119
+ + K G V TY LI A G +DEA ++ ++ P + +Y
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I R+ Q D A ++K+KG PN + + +A + MTE
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
P +++T+ L G+
Sbjct: 727 ACNPDYITMEILTEWLSAVGE 747
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 3/205 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVE 66
P V + L+ GL G E +V +M Q P+ T+N LI+ CK+ +E E
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + K G +V T L+ + K G I+ A + + G Y +I+
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ A F E+ G P+ VY TLI+ + G+ A+ L +M E G +P
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV 557
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQLE 211
F+++ +G C K+ L E E L+
Sbjct: 558 SFNVLINGF--CRKNKLDEAYEMLK 580
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ G G + A ++ ++M +G +PD TF LI CK+G
Sbjct: 820 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 879
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G +V TY LI + K G +D A LLH + + G P Y
Sbjct: 880 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 939
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G ++A E + G + YTTL+ + G +A L EM G
Sbjct: 940 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P F+++ +G G + EK+
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKL 1026
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++ L L A++ ++MI+QG PD + +LI+ CK G+
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + DV TY +I + G + EA +L H + G P +
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DAF + + G PN YTTLI + G A L EM ++G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + +GL G + A K+
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKL 956
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ GL G L+SA +++++M K G P++ T+NS++ +CKSG
Sbjct: 890 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 949
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V++ G AD TY L+ A K+G +D+A +L ++ G P +
Sbjct: 950 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM-CGRGGRFVEAANYLMEMTEM 179
++ G G +D + + KG PN + +L+ C R A Y +M
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY-KDMCSR 1068
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAE 205
G+ P + ++ + G +C ++ E
Sbjct: 1069 GVGPDGKTYENLVKG--HCKARNMKE 1092
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS-GEV 61
D G +P R D+ Q L++ G L A+++ KM+ G +++ N + + K +
Sbjct: 613 DWGSDP--RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 670
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ ++ ++G C +V++Y I+I V + G I EA LL + G+ P Y+ +
Sbjct: 671 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G R G+ D + +K KG PN +Y ++I + R + EA EM G+
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790
Query: 182 TPISRCFDLVTDGLKNCGKHDL 203
P + + + DG C + D+
Sbjct: 791 LPDTVVYTTLIDGF--CKRGDI 810
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G AG+++ A ++ N MI+ G P++ T+ +LI+ +CK G+++
Sbjct: 858 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + + K+G ++ TY ++ + K+G I+EA +L+ G N Y ++
Sbjct: 918 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ D A E+ KG P + L+ G + L M G+ P
Sbjct: 978 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037
Query: 184 ISRCFD 189
+ F+
Sbjct: 1038 NATTFN 1043
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ G G LE ++++N M+ +G P+ TFNSL++ C
Sbjct: 995 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y +C G D TY+ L+ KA + EA+ L + G + S Y+
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114
Query: 121 IIKGAFRRGQFDDA------------------FCFFSEIKIKGHPPNRPV 152
+IKG +R +F +A F FFS+ K KG P+ V
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 1164
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G + +A + +M + PD+ T+ ++I C+ G+
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + G D T+ LI KAG + +AFR+ +++++ G +P Y
Sbjct: 845 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 904
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D A E+ G PN Y +++ + G EA + E G
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + + + D G+ D A++I
Sbjct: 965 LNADTVTYTTLMDAYCKSGEMDKAQEI 991
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 35/228 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + +V GL +G +E A ++V + G + D T+ +L++ CKSGE
Sbjct: 925 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 984
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPS 116
++ E+ + G + T+ +L+ GM+++ +LL+ ++ G P F S
Sbjct: 985 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 1044
Query: 117 L-------------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L Y ++KG + +A+ F E+K KG
Sbjct: 1045 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+ Y+ LI + +F+EA +M GL FD +D
Sbjct: 1105 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 1152
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V ++++ + G ++ A ++ M +G PD+ ++++++ C+ GE++ ++
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ + G + Y +I + + + EA ++ G P +Y +I G +RG
Sbjct: 749 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
A FF E+ + P+ YT +I+ + G VEA EM GL P S F
Sbjct: 809 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868
Query: 190 LVTDGLKNCG 199
+ +G G
Sbjct: 869 ELINGYCKAG 878
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ L G A+++ + M K+G +PD+ T+ +L++ CK G
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + ++G D+ TY LI AG +DEA +LL ++V G P Y
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + DDA F E+ G PN Y ++ R A + +T+ G
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449
Query: 181 LTPISRCFDLVTDGL 195
++++ GL
Sbjct: 450 TQLELSTYNIILHGL 464
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++ G ++G + A + KM G +P++ T++SL+ +CK+G
Sbjct: 235 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ S+ K G D++TY+ L+ K G + E+ +L +V G P Y
Sbjct: 295 STEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 354
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + + G P+ Y TLI R R +A EM G
Sbjct: 355 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 414
Query: 181 LTPISRCFDLVTDGL 195
++P ++++ GL
Sbjct: 415 VSPNIITYNIILQGL 429
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
+Q L A ++ A +++N M+K G PD T+NS++ C SG+ + + + G
Sbjct: 216 IQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 275
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
+V TY L+ + K G EA ++ ++ + G P + Y +++G + G+ ++
Sbjct: 276 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEK 335
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + G P+ Y TLI C G+ EA L M +G+ P D+VT G
Sbjct: 336 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP-----DIVTYG 388
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A + +M+ G P++ T+N +++ + +
Sbjct: 375 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y S+ K G+ ++STY I++ + K + DEA R+ NL +
Sbjct: 435 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D+A F+ G P+ Y+ + G E + + M E G
Sbjct: 495 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 554
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ SR + + L G
Sbjct: 555 CSADSRMLNSIVRKLLQRG 573
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 11/225 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ---GSDPDLETFNSLIETICK 57
M++ G P V + L++GL + + A ++++ M GS PD+ ++N+++ K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 58 SG--------EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
G ++ +E+ ++ K G D TY ++ +G EA L + D
Sbjct: 214 EGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 273
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
G P Y+ ++ + G+ +A F + +G P+ Y TL+ + GR +E+
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES 333
Query: 170 ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
M +G+ P ++ + DG GK D A K+ VS+
Sbjct: 334 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 378
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++++QGL + +AK++ + K G+ +L T+N ++ +CK+
Sbjct: 410 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 469
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M+ ++C + T+ I+I A+ K G +DEA L +G P Y+
Sbjct: 470 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 529
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + +G ++ F ++ G + + +++ + G A YL + E
Sbjct: 530 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 587
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 94/255 (36%), Gaps = 47/255 (18%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE---- 62
P V +L+ AG L+ + ++K+G D TF L++ +C
Sbjct: 89 TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148
Query: 63 ---------FCVEMYYSVCKL--------------------------GSCADVSTYKILI 87
C+ +S L GS DV +Y ++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 88 PAVSKAGM--------IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
K G+ +D+A +L+ +V++G P Y I+ G GQ +A
Sbjct: 209 NGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK 268
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+++ G PN Y++L+ + GR EA MT+ GL P + + G G
Sbjct: 269 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEG 328
Query: 200 KHDLAEKIEQLEVSL 214
+ +EK+ L V +
Sbjct: 329 RVIESEKLFDLMVRI 343
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS---CADVSTY 83
E A+ + ++++++G + N + + + V Y + + G+ V TY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTY 95
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
ILI +AG +D F L N+V+ G + P++KG + DA
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P R + L++ LL A +E ++ M G PD+ T+++ +E CK+ +
Sbjct: 201 MGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARD 260
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + + TY ++I + ++G ++EAF +V+ G +P Y
Sbjct: 261 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 320
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A E+ G PN VY TL+ + G+ EA + L EM G
Sbjct: 321 LMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ P +D + GL G+ A K+ E ++V R
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHR 417
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G +P L+ GL G L+ AK ++++M G P++ + +L++ K G+
Sbjct: 306 MVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGK 365
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G + Y LI + K G + A +LL+ +++ GH P Y P
Sbjct: 366 AAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHP 425
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G F+ D AF +E++ G PN Y +I + G EA N L EM G
Sbjct: 426 LMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEG 485
Query: 181 LTP 183
L P
Sbjct: 486 LKP 488
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D L++GL G L A +++N+MIK G PD T++ L++ + +
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYD 435
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G + TY I+I + + G EA LL ++ +G P +YAP
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 495
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A + P+ Y +LI GR EA Y ++ + G
Sbjct: 496 LIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRG 555
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L P + + G C +L EK +QL
Sbjct: 556 LVPDEFTYSGLIHGY--CKTRNL-EKADQL 582
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++GL G +E A++ ++ K+G PD T++ LI CK+ +E ++ + G
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG 590
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY L+ K+ ++ +L +++ G P +Y +I+ R + AF
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+E++ G P+ +Y++LI+ + +A L EM + GL P C++ + DG
Sbjct: 651 MVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 710
Query: 196 KNCGKHDLAEKI 207
G A +
Sbjct: 711 CRSGDISRARNV 722
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ A ++AK++ +M ++ + T+N +I +C+SG
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + G D TY L+ + K G + EA LL + G P +YA
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +AF +E+ G PN+ +Y LI + G+ A+ L EM ++G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415
Query: 181 LTP 183
P
Sbjct: 416 HRP 418
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G LE A Q++ +M+ G P+ +T+ L+E KS + E + S+ G
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y I+I +S++ ++ AF +L + ++G P +Y+ +I G + + A
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV 685
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ +G P Y LI R G A N + GL P + + DG
Sbjct: 686 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDG- 744
Query: 196 KNCGKHDLAEKIE 208
NC D+ + +
Sbjct: 745 -NCKNGDITDAFD 756
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G++ A + + M K PDL +NSLI+ + G
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E Y V K G D TY LI K +++A +LL ++ G P Y
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G F+ + + G P+ +Y +I R A L E+ + G
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 660
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + + GL C D+ + + L+
Sbjct: 661 LVPDLHIYSSLISGL--CKMADMEKAVGLLD 689
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++ L + +E A ++ ++ K G PDL ++SLI +CK ++E V + + K
Sbjct: 635 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKE 694
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + Y LI ++G I A + +++ G P Y +I G + G DA
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + ++ +G P+ VY L T C +A EM G +S F + G
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVS-LFSTLVRG 813
Query: 195 LKNCGKHDLAEKI 207
G+ EK+
Sbjct: 814 FCKRGRLQETEKL 826
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 4/207 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L+QG + A +++N+M G P+ T+ +I +C++GE +
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEA 474
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPII 122
+ + G + Y LI SK G I A L N+ + N P L Y +I
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTK--ANVLPDLFCYNSLI 532
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
KG G+ ++A ++++++ +G P+ Y+ LI + +A L +M GL
Sbjct: 533 KGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLK 592
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + + +G H+ I Q
Sbjct: 593 PNADTYTDLLEGYFKSNDHEKVSSILQ 619
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 80/204 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +++ GL G + A ++ +MI +G P+ + LI K G
Sbjct: 446 MRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGH 505
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E ++ K D+ Y LI +S G I+EA + + G P Y+
Sbjct: 506 ISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSG 565
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + A ++ G PN YT L+ + + ++ L M G
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + +V L ++A
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVA 649
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 36/179 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + L+ G +G + A+ + + ++ +G P+ T+ +LI+ CK+G+
Sbjct: 691 MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGD 750
Query: 61 VEFCVEMY--------------YSVCKLGSCAD---------------------VSTYKI 85
+ ++Y Y+V G C+D VS +
Sbjct: 751 ITDAFDLYKDMLDRGIAPDAFVYNVLATG-CSDAADLEQALFLTEEMFNRGYAHVSLFST 809
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
L+ K G + E +LLH +++ P +I + G+ +A F+E++ K
Sbjct: 810 LVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK 868
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 65/154 (42%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ L++T K+G V ++ + LG L+ + +A ++ ++L +
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G P Y+ ++ + FD A F E++ + N Y +I+ R G
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EA + EM + GL+P + + + +GL G+
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGR 330
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++L+ GL G ++ K ++ MIKQ PD+ T +SLI+ +
Sbjct: 162 MRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ +Y I+I +SKA M+DEA L + P Y+
Sbjct: 222 ANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYST 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + E++ G N Y++L+ + + G F A ++ + G
Sbjct: 282 LIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKG 341
Query: 181 LTPISRCFDLVTDGLKNCGK--------HDLAEKIEQLEVSLRSV 217
P ++++ DGL G+ HDL K +L+V L +V
Sbjct: 342 FEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTV 386
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G +R ++++ GL A ++ A + +M + PD T+++LI+ + K G
Sbjct: 232 MAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGR 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G A+V TY L+ + K+G D A R+ + + G P Y
Sbjct: 292 ISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNI 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA F ++ IKG+ + +YT +I R F EA G
Sbjct: 352 LVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA---------YG 402
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
TP + ++++ L K+ L
Sbjct: 403 CTPNAVTYEIIIRALFKNDKNKL 425
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 22/213 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + +L+ + L A ++ K++K G PD T +L++ +C + E
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG---------------------MIDEA 99
V+ + + V G D +Y LI + K+G ++ +A
Sbjct: 61 VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDA 120
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+ L +V P Y +I G GQ +DA F+E+++K PN + LI
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180
Query: 160 CGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLV 191
+ G + L M + + P + C L+
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLI 213
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
PD+ T+N+LI C G++E + ++ + +V ++ ILI + K G + +
Sbjct: 134 PDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSV 193
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L +++ P + +I G F + + A F+ + G + Y +I +
Sbjct: 194 LAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSK 253
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD-LAEKIEQLEVSLRS 216
EA EM +TP + + + DGL G+ + + I+++ + RS
Sbjct: 254 AKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRS 308
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D G P R + L++ LL A +E ++ M G PD+ T+++ IE CK+ +
Sbjct: 199 MADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARD 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + + TY ++I + ++G ++EAF +V+ G +P Y
Sbjct: 259 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + +A E+ G PN VY TL+ + G+ EA + L EM G
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ P +D + GL G+ A K+ E ++V LR
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLR 415
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +P + + L++GL G +E A++ ++ K+G PD T++ LI CK+G
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G + TY L+ K+ ++ +L +++ G P +Y
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R + AF +E++ G P+ +Y++LI+ + +A L EM + G
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P C++ + DG G A +
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNV 720
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P + LV G + G A ++ +MI G P+ +++LI +CK G+
Sbjct: 339 MSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQ 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K+G D TY L+ + D AF LL+ + G P Y
Sbjct: 399 LGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGI 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A E+ +G PN +Y LI + G A L +MT+
Sbjct: 459 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ P C++ + GL G+ + AE+
Sbjct: 519 VHPDLFCYNSLIKGLSTVGRMEEAEE 544
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G LE A Q++ +M+ G P+ +T+ L+E KS + E + S+ G
Sbjct: 564 LIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y I+I +S++ ++ AF +L + ++G P +Y+ +I G + + A
Sbjct: 624 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAV 683
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ +G P Y LI R G A N + GL P + + DG
Sbjct: 684 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDG- 742
Query: 196 KNCGKHDLAEKIE 208
NC D+ + +
Sbjct: 743 -NCKNGDITDAFD 754
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ G G + A + + KM K PDL +NSLI+ + G
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E Y V K G D TY LI K G +++A +LL ++ G P Y
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G F+ ++ + G P+ +Y +I R A L E+ + G
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 658
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P + + GL C D+ + + L+
Sbjct: 659 LVPDLHIYSSLISGL--CKIADMEKAVGLLD 687
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P L++G + E ++ M+ G PD + +I + +S
Sbjct: 584 MLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + V K G D+ Y LI + K +++A LL + ++G P Y
Sbjct: 644 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNA 703
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A F I KG PN YT LI + G +A + EM + G
Sbjct: 704 LIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRG 763
Query: 181 LTPISRCFDLVTDG 194
+ P + ++++ G
Sbjct: 764 IAPDAFVYNVLATG 777
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ A ++AK++ +M ++ + T+N +I +C+SG
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + G D TY L+ + K + EA LL + G P +Y
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +AF E+ G PN+ +Y LI + G+ A+ L EM ++G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 181 LTPISRCFDLVTDG 194
L P + ++ + G
Sbjct: 414 LRPDTFTYNPLMQG 427
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 1/193 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++ L + +E A ++ ++ K G PDL ++SLI +CK ++E V + + K
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKE 692
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + Y LI ++G I A + +++ G P Y +I G + G DA
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + E+ +G P+ VY L T C +A EM G +S F+ + G
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVS-LFNTLVHG 811
Query: 195 LKNCGKHDLAEKI 207
GK EK+
Sbjct: 812 FCKRGKLQETEKL 824
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+QG + A +++N+M G P++ ++ +I +C++GE +
Sbjct: 413 GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEA 472
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G + Y LI SK G I A L + + +P Y +IKG
Sbjct: 473 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKG 532
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ ++A ++++++ +G P+ Y+ LI + G +A L +M GL P
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPN 592
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ D TD L+ K + EK+ + S+
Sbjct: 593 A---DTYTDLLEGYFKSNDYEKVSSILQSM 619
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V +++ GL G + A ++ +MI +G P+ + LI K G
Sbjct: 444 MRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGN 503
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + K D+ Y LI +S G ++EA + + G P Y+
Sbjct: 504 ISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSG 563
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A ++ G PN YT L+ + + + ++ L M G
Sbjct: 564 LIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + +V L ++A
Sbjct: 624 DKPDNHIYGIVIRNLSRSENMEVA 647
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + L+ G +G + A+ + + ++ +G P+ T+ +LI+ CK+G+
Sbjct: 689 MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGD 748
Query: 61 VEFCVEMY--------------YSVCKLGSC--------------------ADVSTYKIL 86
+ ++Y Y+V G A+VS + L
Sbjct: 749 ITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTL 808
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
+ K G + E +LLH +++ P ++ + G+ +A F+E++ K
Sbjct: 809 VHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + L++T K+G V ++ + LG L+ + +A ++ ++L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ G P Y+ I+ + FD A F E++ + N Y +I+ R
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
G EA + EM + GL+P + + + +GL
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL 323
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ A L+S+ ++ N M G +PD T+ +LI+ K+G
Sbjct: 93 MIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGF 152
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+Y + G D TY I+I + KAG ++ A++L + + G+ P Y
Sbjct: 153 HDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNI 212
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+FD A +S+++ G+ P+R Y ++ + G G +A EM G
Sbjct: 213 IIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAG 272
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ F L+ D GK AEK Q
Sbjct: 273 WVADNPIFGLMVD---MWGKTGNAEKAAQW 299
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF V ++ L A + ++++MI++G +P++ T+N LI ++ +++
Sbjct: 62 GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + +G D TY LI +KAG D A L + G P Y+ II
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHC 181
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ + A+ F E+ +G+ P+ Y +I + + G+F A ++ E+G P
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPD 241
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI-EQLE 211
+ ++ + L NCG + AE++ E++E
Sbjct: 242 RVTYGIIMEVLGNCGHIEDAEQVFEEME 269
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG+ ++A ++ +M G PD T++ +I + K+G++ +++ + G + T
Sbjct: 150 AGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVT 209
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y I+I +KAG D A +L +L E G+ P Y I++ G +DA F E++
Sbjct: 210 YNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEME 269
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLVTDGLKN 197
G + P++ ++ M G+ G +AA + M + GL P + C L++ L++
Sbjct: 270 RAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRS 325
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 73/160 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+G+ P + ++++ AG + A ++ + + + G PD T+ ++E + G
Sbjct: 198 MTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGH 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + + G AD + +++ K G ++A + + +++ G P
Sbjct: 258 IEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNS 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
++ R +D A + G P YT+L++ C
Sbjct: 318 LLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSC 357
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 3/176 (1%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
P+ G L+V G E A Q N+M+ G P++ NSL+ +S + +
Sbjct: 278 PIFG--LMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVL 335
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ K G + TY L+ + + E L + GH P + + + G
Sbjct: 336 GGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGHPAHPFVCSLLASGGTAG 395
Query: 129 GQFDDAF-CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G CFF ++ + R +LI R G+ V A + E L P
Sbjct: 396 GTMVVGIRCFFDAMQFEELESRRGFADSLIDFLHRAGKAVAAGSVWEVAAEKNLYP 451
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 39/250 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ A YL A + N+M + G +PD T+ +LI+ K+G
Sbjct: 406 MVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGF 465
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
++F +EMY + G D TY ++I + KAG + A +L +VE G P
Sbjct: 466 LDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNI 525
Query: 114 ----------FPS---LYAPIIKGAFRR---------------GQFDDAFCFFSEIKIKG 145
+ S LY + F+ G D+A FSE+K K
Sbjct: 526 MIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKN 585
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLVTDGLKNCGKHDLA 204
P+ PVY L+ + G+ G +A + M GL P + C L++ L+ H LA
Sbjct: 586 WVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLR---VHKLA 642
Query: 205 EKIEQLEVSL 214
+ L+ L
Sbjct: 643 DAYNLLQSML 652
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +++ L AG+L +A ++ +M++QG P+L T+N +I K+
Sbjct: 476 MQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARN 535
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++Y + G D TY I++ + G +DEA + + P +Y
Sbjct: 536 YQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGL 595
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G + A+ ++ + G PN P +L++ R + +A N L M E+G
Sbjct: 596 LVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELG 655
Query: 181 LTPISRCFDLV 191
L P + + L+
Sbjct: 656 LNPSLQTYTLL 666
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GFN +V L A + +++++M+K G P++ T+N LI + ++ +
Sbjct: 375 GFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDA 434
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V+++ + ++G D TY LI +KAG +D A + + G +P Y+ II
Sbjct: 435 VDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINC 494
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G A F E+ +G PN Y +I + + + A +M G P
Sbjct: 495 LGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPD 554
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ +V + L +CG D AE +
Sbjct: 555 KVTYSIVMEVLGHCGYLDEAEAV 577
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P ++++ L + GYL+ A+ + ++M ++ PD + L++ K+G
Sbjct: 546 MQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGN 605
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + Y ++ G +V T L+ A + + +A+ LL +++E G NP Y
Sbjct: 606 VEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTL 665
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP 147
++ D + + + GHP
Sbjct: 666 LLSCCTEARSPYDMGIYCELMAVTGHP 692
>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
Length = 975
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ +VQ L +G + A Q ++ M++ G PD+ T+++ + +C +GE
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGE 595
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + DV + ILI K+ +DEA +++ ++E G P Y
Sbjct: 596 VDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNL 655
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ + A + ++ + P YT+LI GR EA EM E G
Sbjct: 656 MIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG 715
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + +GL+ CG+ + A
Sbjct: 716 CAPNNIAYTAFINGLRKCGRIETA 739
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L G+ ++A ++ +M G P ++ +++ +C SG
Sbjct: 501 MKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGR 560
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V V+ + ++G D+ TY + + G +D+A L ++ + P +
Sbjct: 561 VTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNI 620
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A E+ KG P+ Y +I +C + GR +A +YL +M
Sbjct: 621 LINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEE 680
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + DG + G+ D A K+
Sbjct: 681 KQPTVITYTSLIDGFCSAGRPDEAIKL 707
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L N LE + N+M G P T+NSL IC+ + + +++ + G
Sbjct: 481 LIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNG 540
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ ++ + +G + EA + L +++ G P Y+ + G G+ DDA
Sbjct: 541 HPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDAL 600
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F +I K + P+ + LI + + EA + EM E GL P ++L+ D
Sbjct: 601 HLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMID 658
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKM-------------------IKQGSDPDLETFNSLIET 54
+++++ L++ G +E+A Q++ M I++ + P+ ++FN ++
Sbjct: 390 NVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCG 449
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+CK +++ + + + LG + + LI + ++E + + + + + G P
Sbjct: 450 LCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPS 509
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y + G RR A E++ GHPP T ++ GR EA +L
Sbjct: 510 EFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLD 569
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
M ++G P + +G+ N G+ D A
Sbjct: 570 GMLQIGFLPDIVTYSAAMNGMCNTGEVDDA 599
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ NAG + A + +M + G D +L+ K G+V+ VE+ S+ LG
Sbjct: 217 LLRCYCNAGRPDDANDVFQRMSELGW-VDEHVLTTLMVAFSKWGKVDGAVELLGSMEALG 275
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
T +L+ +K G +D+A + +V G ++Y+ +I+G ++ A
Sbjct: 276 MRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAV 335
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE-MGLTPISRCFDLVTDG 194
F E+K G P+ + +I R G F ++ E E + + +++V +
Sbjct: 336 KLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEE 395
Query: 195 LKNCGKHDLAEKI 207
L +CG+ + A ++
Sbjct: 396 LVHCGEVEAAYQL 408
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V +L++ G +E A ++KM+ + P + T+ SLI+ C +G
Sbjct: 641 MLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGR 700
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH--NPFPSLY 118
+ ++++ + + G + Y I + K G I+ A +V G + F LY
Sbjct: 701 PDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLY 760
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV G G ++ A M KM+ G DL ++ LIE +C+ ++ V+++ +
Sbjct: 285 VLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSS 344
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS-----LYAPIIKGAFRRG 129
G DV K +I A + G F ++ + + S LY +++ G
Sbjct: 345 GVAPDVRLLKKVIEAFCREG----DFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCG 400
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ + A+ + G N V GG +++ + E P S F+
Sbjct: 401 EVEAAYQLLRSMVCGGQAVNNDV---------AGG------AHMLHIRE-DAKPNSDSFN 444
Query: 190 LVTDGLKNCGKHDLAEKIEQLEVSL 214
+V GL K D+A + + +SL
Sbjct: 445 IVVCGLCKVKKLDMALALTKDMISL 469
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 20/203 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF + +L++GL + A ++ +M G PD+ +IE C+ G+
Sbjct: 306 MVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGD 365
Query: 61 VEFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-------- 111
+ L S + V Y +++ + G ++ A++LL ++V G
Sbjct: 366 FAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAG 425
Query: 112 -----------NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
P + ++ G + + D A ++ G ++ LI
Sbjct: 426 GAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHEL 485
Query: 161 GRGGRFVEAANYLMEMTEMGLTP 183
R E +M ++GLTP
Sbjct: 486 CNMDRLEEGYGIFNQMKDLGLTP 508
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ L++ G++ A K ++ G +P+L F+SLI +CK G
Sbjct: 254 MIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGS 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DGHNPFPSLYA 119
++ EM + + G +V T+ LI + K G ++AFRL LV D + P Y
Sbjct: 314 IKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYT 373
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + + A +K +G PN YT LI + G F A + M +
Sbjct: 374 CMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKE 433
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
G TP ++ + DGL C K E + L L+S
Sbjct: 434 GFTPNIFTYNAIIDGL--CKKGRFPEAYKLLRRGLKS 468
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 9/219 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + + ++ GL G A +++ + +K G D T+ LI C+ +
Sbjct: 430 MGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTD 489
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + K+G D+ TY +LI + ++E+ +L V G P Y
Sbjct: 490 NKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTS 549
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G A FF +++ G P+ Y LI+ + EA M + G
Sbjct: 550 MICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNG 609
Query: 181 LTP--ISRCFDLVTDGLKNCGKHDLAEK---IEQLEVSL 214
L+P ++R VT + C + D A +E+LE L
Sbjct: 610 LSPCEVTR----VTLAYEYCKQGDSATAMIILERLEKKL 644
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L+ G AG A ++++ M K+G P++ T+N++I+ +CK G
Sbjct: 395 MKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGR 454
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ K G AD TY ILI + +A + + + G P Y
Sbjct: 455 FPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNV 514
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R+ + +++ F E G P + YT++I R G A + +M + G
Sbjct: 515 LIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYG 574
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P S + + GL N K D A
Sbjct: 575 CKPDSITYGALISGLCNESKLDEA 598
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSG 59
M KG+ P V L+ GL G+ E A ++ K+++ + P++ T+ +I CK
Sbjct: 324 MVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEE 383
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + + + G + +TY LI KAG A+ L+ + ++G P Y
Sbjct: 384 KLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYN 443
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
II G ++G+F +A+ G ++ YT LI+ R +A M ++
Sbjct: 444 AIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV 503
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
GL P ++++ K + +EK+ + V L
Sbjct: 504 GLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGL 538
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+ P V ++ G L A+ ++ +M +QG P+ T+ LI+ CK+G
Sbjct: 364 NYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRA 423
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + K G ++ TY +I + K G EA++LL ++ G + Y +I
Sbjct: 424 YELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISE 483
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R+ A FS + G P+ Y LI R + E+ E +GL P
Sbjct: 484 FCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPT 543
Query: 185 SRCF 188
+
Sbjct: 544 KETY 547
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 2/174 (1%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
D E ++ + + G+++ V M + G +I G +D A +
Sbjct: 155 DRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEK 214
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+ +++ P + Y ++ G R G+ D + ++ +G+ + T +I+
Sbjct: 215 VFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFS 274
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
G A Y + +MGL P F + +GL C + + E LE +R
Sbjct: 275 EKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGL--CKIGSIKQAFEMLEEMVR 326
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 70/274 (25%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
M + G P + + L+ GL+N+ ++ESA++++ M PD+ T+N++I+ C+
Sbjct: 158 MKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGK 217
Query: 58 --------------------------------SGEVEFCVEMYYS--------------- 70
G+ + C+ +Y+
Sbjct: 218 TQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSL 277
Query: 71 ----VCKLGSCAD----------------VSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
+CK G C + V+ Y LI + +K G + EA L + ++G
Sbjct: 278 VIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEG 337
Query: 111 HNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
P Y ++ + G+ D+A + ++ G N +Y++LI G+ GR EA
Sbjct: 338 LEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAE 397
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EM + G P S C++ + D L CGK D A
Sbjct: 398 KLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEA 431
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V L+ G + A + +M K+G +PD+ T+ ++ +CKSG
Sbjct: 298 MIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGR 357
Query: 61 VEFCVEMYYSVCKL-GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ +E Y C++ G + Y LI + KAG + EA +L +V+ G P Y
Sbjct: 358 LDEAME-YLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYN 416
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G+ D+A FF ++ +G YT +I R + EA M +
Sbjct: 417 ALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDK 476
Query: 180 GLTPISRCFDLVTDGLKNCGK 200
G+TP + F ++ GL GK
Sbjct: 477 GITPTAAAFRALSIGLCLSGK 497
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P L++ GL G + KMI++G ++ + +LI++ K G
Sbjct: 263 MDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGN 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + K G DV TY +++ + K+G +DEA L +G LY+
Sbjct: 323 MGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSS 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F E+ KG PP+ Y LI + G+ EA + M + G
Sbjct: 383 LIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEG 442
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ ++ +GL K++ A K+ + +
Sbjct: 443 CDQTVYTYTIMINGLFREHKNEEALKMWDMMI 474
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG + A+++ +M+K+G PD +N+LI+ + K G+ + + + + G
Sbjct: 383 LIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEG 442
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY I+I + + +EA ++ +++ G P + + + G G+ A
Sbjct: 443 CDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARAC 502
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ G P L +C + GR EA + G R ++ + L
Sbjct: 503 KLLDELAPMGVIPETAFEDMLNVLC-KAGRIKEACKLADGFVDRGREIPGRVRTVLINAL 561
Query: 196 KNCGKHDLAEKIEQLEVSL 214
+ G DLA K+ ++ +
Sbjct: 562 RKAGNADLALKLMHSKIGI 580
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++V + +G L+ A + + G + ++SLI+ + K+G
Sbjct: 333 MKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGR 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + K G D Y LI A++K G DEA + ++G + Y
Sbjct: 393 VHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTI 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G FR + ++A + + KG P + L G+ A L E+ MG
Sbjct: 453 MINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMG 512
Query: 181 LTP 183
+ P
Sbjct: 513 VIP 515
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L++ K + K G ++ NSLI++ G VE + ++ + + G + TY
Sbjct: 111 GDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTY 170
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ + + I+ A R+L + P Y +IKG + G+ AF F ++++
Sbjct: 171 NFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMEL 230
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+ P++ Y TLI C G F + EM E GL + LV GL GK
Sbjct: 231 RNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGK 287
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 91/242 (37%), Gaps = 37/242 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL------------------- 45
GF V + L++ + G +E + M + G +P L
Sbjct: 127 GFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESA 186
Query: 46 ----------------ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPA 89
T+N++I+ C+ G+ + E + + D TY LI A
Sbjct: 187 ERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQA 246
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
G D L H + E+G P Y+ +I G + G+ + + F ++ KG N
Sbjct: 247 CYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVN 306
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+YT LI + G EA M + GL P + +V + + G+ D E +E
Sbjct: 307 VAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLD--EAMEY 364
Query: 210 LE 211
LE
Sbjct: 365 LE 366
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L GL +G + A ++++++ G P+ F ++ +CK+G
Sbjct: 473 MIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPE-TAFEDMLNVLCKAGR 531
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ ++ G +LI A+ KAG D A +L+H+ + G++ S+
Sbjct: 532 IKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMGSV 588
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M++ G P V ++L++GL + + A ++++ M G D PD+ +++++I+ + K
Sbjct: 160 MTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKE 219
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+ + Y+ + + G DV TY ++ A+ KA +D+A +L+ +V++G P Y
Sbjct: 220 GDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITY 279
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A ++ G P+ YT+L+ + GR +EA L M +
Sbjct: 280 NSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIK 339
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
GL P + + G G L E + L++ +R+
Sbjct: 340 RGLKPNVITYSTLLHGYATKGA--LVEMRDLLDLMVRN 375
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + +V L A ++ A ++N+M+K G PD T+NS++ C SG+
Sbjct: 232 MLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQ 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +C G D TY L+ + K G EA ++L ++++ G P Y+
Sbjct: 292 SKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYST 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +G + + G P+R V++ LI C + A +M +
Sbjct: 352 LLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQR 411
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
LTP + + DGL G+ D A
Sbjct: 412 LTPDVVTYGTLIDGLCKSGRVDDA 435
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G + P V ++ GL G + A ++M+++G PD+ T+N+++ +CK+
Sbjct: 195 MADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKA 254
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
++ +++ + K G D TY ++ +G EA +L + DG P Y
Sbjct: 255 QAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTY 314
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ +A + +G PN Y+TL+ G VE + L M
Sbjct: 315 TSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVR 374
Query: 179 MGLTPISRCFDLVTDGLKNCGKH 201
G+ P F ++ + C KH
Sbjct: 375 NGIQPDRHVFSIL---ICACTKH 394
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
SD P + +L+ AG L+ + +IK+G + F L++++C
Sbjct: 90 SDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRT 149
Query: 62 EFCVEMYY-SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ + + +LG V +Y IL+ + EA LLH + +DG + P + Y
Sbjct: 150 SNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSY 209
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ II G F+ G D A+ + E+ +G P+ Y T++ + +A + L M +
Sbjct: 210 STIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVK 269
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
G+ P ++ + G + G+
Sbjct: 270 NGVMPDCITYNSIVHGYCSSGQ 291
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G N G L A ++ N M K G +P++ TFNSLI CK G+
Sbjct: 225 MESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGK 284
Query: 61 VE----FCVEM-------------------------------YYSVCKLGSCADVSTYKI 85
+ F EM Y + + G AD+ TY
Sbjct: 285 LHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNA 344
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + K G +A L+ L ++ P S Y+ +I G R D AF + + G
Sbjct: 345 LILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSG 404
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN + L + + F A N LM+M + S + DGL CGK +LA
Sbjct: 405 CHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAM 464
Query: 206 KI 207
K+
Sbjct: 465 KL 466
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D GF P V + + LL+ ++ A +M + P+ TFN ++ +CKSG+
Sbjct: 155 MKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGK 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E VE+ + +G +V +Y LI G++ A +L + + ++G P +
Sbjct: 215 LEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNS 274
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A FFSE+K+ PN Y TLI G+ G A EM G
Sbjct: 275 LIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNG 334
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ ++ + GL GK
Sbjct: 335 VKADILTYNALILGLCKEGK 354
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 87/197 (44%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
R D L + + +A + ++M G P +E+ N+ + ++ V+ + Y
Sbjct: 130 RVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYRE 189
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ + + T+ +++ A+ K+G +++A +L + G P Y +I G +G
Sbjct: 190 MRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGL 249
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
A + + G PN + +LI + G+ EA + EM M +TP + ++
Sbjct: 250 LSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNT 309
Query: 191 VTDGLKNCGKHDLAEKI 207
+ +G G ++A K+
Sbjct: 310 LINGYGQVGNSNMAGKV 326
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ NP V +LV G ++ AK + M+K+ P++ T+NSL+ C EV
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNK 332
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH--NPFPSL--YA 119
++ ++ ++G DV +Y I+I K M+DEA +L E+ H FP + Y
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLF----EEMHCKQIFPDVVTYN 388
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ A E+ +G PPN Y +L+ + +A L ++ +
Sbjct: 389 SLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDH 448
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++++ +GL G+ A+K+
Sbjct: 449 NIQPSVCTYNILINGLCKSGRLKDAQKV 476
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V +++ G ++ A ++ +M + PD+ T+NSLI+ +CKSG
Sbjct: 340 MAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGR 399
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +++ + G ++ TY L+ A+ K +D+A LL L + P Y
Sbjct: 400 ISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNI 459
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+I G + G+ DA F ++ + G+ + Y T+I C +G
Sbjct: 460 LINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + +L+ G+ + + + ++K+G +PD T +LI+ +C G+
Sbjct: 95 MEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + V LG + +Y+ LI + K G A +L + +Y
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + +DAF F+SE+ K P Y TLI G+ +A L +M
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F ++ D GK A+ +
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNV 301
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG+ P L++GL G + A +K++ G + ++ +LI +CK G+ +
Sbjct: 133 KGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKA 192
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+EM + DV Y +I V K ++++AF +V P Y +I
Sbjct: 193 ALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLIC 252
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G GQ DA ++ ++ P ++ L+ + G+ EA N + M + + P
Sbjct: 253 GLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKP 312
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
++ + +G + + AE I
Sbjct: 313 NIVTYNSLMNGYCLVNEVNKAESI 336
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF L+ GL G ++A +M+ ++ + D+ +N++I+ +CK V
Sbjct: 169 GFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDA 228
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ Y + C V TY LI + G + +A LLH ++ + NP ++ ++
Sbjct: 229 FDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDA 288
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +A F + K PN Y +L+ +A + M ++G+ P
Sbjct: 289 FCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPD 348
Query: 185 SRCFDLVTDGL 195
+ ++ G
Sbjct: 349 VHSYSIMISGF 359
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + + L+ G + A+ + N M + G PD+ +++ +I CK
Sbjct: 305 MMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKM 364
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + DV TY LI + K+G I A +L+ + + G P Y
Sbjct: 365 VDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNS 424
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
++ + D A +++K P+ Y LI + GR +A
Sbjct: 425 LLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDA 473
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + L+ L +++ A +++ K+ P + T+N LI +CKSG
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGR 469
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
++ +++ V G DV TY +I K G + F
Sbjct: 470 LKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQF 509
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 34 NKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSK 92
N ++ Q + P + F ++ ++ K+ V ++ + G +++ T ILI S+
Sbjct: 57 NHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQ 116
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G +F + N+++ G+ P +IKG +G A F ++ G N+
Sbjct: 117 LGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVS 176
Query: 153 YTTLIT-MCGRG 163
Y TLI +C G
Sbjct: 177 YRTLINGLCKVG 188
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L++G G L+ A + K+ G D+ + N ++ ++C G
Sbjct: 232 MRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGR 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ ++ + G V T+ ILI + + G++ +A +L + + GH P + P
Sbjct: 292 WMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNP 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R D A + +G P+ Y L+T + G+ +A L +++ G
Sbjct: 352 LIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG 411
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+P ++ V DGL GK +LA +E LE
Sbjct: 412 CSPSLISYNTVIDGLLKVGKAELA--VELLE 440
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ L G L A ++ M K G P+ +FN LI+ C
Sbjct: 302 MLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKG 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E + G D+ TY IL+ A+ K G +D+A +L L G +P Y
Sbjct: 362 IDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 421
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + A E+ KG P+ T+++ R G+ EA + + G
Sbjct: 422 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFG 481
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + ++ + GL + LA
Sbjct: 482 IKPNAFIYNSIMMGLCKAQQTSLA 505
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P R + L+QG N ++ A + + M+ +G PD+ T+N L+ +CK G+
Sbjct: 337 MPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGK 396
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G + +Y +I + K G + A LL + G P
Sbjct: 397 VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTS 456
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ +A FF +K G PN +Y +++ + + A ++L++M G
Sbjct: 457 VVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANG 516
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + + G+ G LAE+ +L L S
Sbjct: 517 CKPTEASYTTLIKGITYEG---LAEEASKLSNELYS 549
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P D ++ L + G L+ A Q++++ ++ PD+ T LI+ CK V +++
Sbjct: 169 PNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 228
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV TY +LI K G +DEA L L G + I++
Sbjct: 229 FNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCS 288
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G++ DA + + KG P+ + LI + G +A N L M + G TP SR
Sbjct: 289 GGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 348
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEV 212
F+ + G C + + IE LE+
Sbjct: 349 FNPLIQGF--CNRKGIDRAIEHLEI 371
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++L+ L G ++ A +++++ +G P L ++N++I+ + K G+
Sbjct: 372 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 431
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E VE+ +C G D+ T ++ +S+ G + EA + H L G P +Y
Sbjct: 432 AELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNS 491
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + Q A F ++ G P YTTLI G EA+ E+ G
Sbjct: 492 IMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551
Query: 181 LTPIS 185
L S
Sbjct: 552 LVKKS 556
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 5/188 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G V +++++ L + G A +++ M+++G P + TFN LI +C+ G +
Sbjct: 271 GCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKA 330
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + K G + ++ LI ID A L +V G P Y ++
Sbjct: 331 LNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTA 390
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ DDA S++ KG P+ Y T+I + G+ A L EM GL P
Sbjct: 391 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP- 449
Query: 185 SRCFDLVT 192
DL+T
Sbjct: 450 ----DLIT 453
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P V L++ G ++A +++ + + G+ D ++N LI CKSGE
Sbjct: 95 MTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGE 154
Query: 61 VEFCVEMY----------------YSVCKLGSCA----------------DVSTYKILIP 88
+E + + S+C G DV T +LI
Sbjct: 155 IEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLID 214
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A K + +A +L + + G P Y +IKG + G+ D+A F ++ G
Sbjct: 215 ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQS 274
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ + ++ GGR+++A L M G P F+++ + L C K L + +
Sbjct: 275 DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFL--CQKGLLGKALN 332
Query: 209 QLEV 212
LE+
Sbjct: 333 VLEM 336
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 78/197 (39%), Gaps = 40/197 (20%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L+ G LE + + M +G PD+ +LI CK G + + + + G+ D
Sbjct: 79 LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138
Query: 80 VSTYKILIPAVSKAGMIDEAFRLL-HNLVEDGHNPFPSLYAPIIKGAFRRGQFD------ 132
++Y +LI A K+G I+EA R+L H V P + Y ++ RG+
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHTSVA----PNAATYDAVLCSLCDRGKLKQAMQVL 194
Query: 133 -------------------DAFC----------FFSEIKIKGHPPNRPVYTTLITMCGRG 163
DA C F+E++ KG P+ Y LI +
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKE 254
Query: 164 GRFVEAANYLMEMTEMG 180
GR EA +L ++ G
Sbjct: 255 GRLDEAIIFLKKLPSYG 271
>gi|224576625|gb|ACN56986.1| At1g03560-like protein [Capsella rubella]
gi|224576631|gb|ACN56989.1| At1g03560-like protein [Capsella rubella]
gi|224576633|gb|ACN56990.1| At1g03560-like protein [Capsella rubella]
Length = 196
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 74/134 (55%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGK 200
C++ + D L GK
Sbjct: 129 CYNALIDALTKHGK 142
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + G+ ++A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTP 183
G+TP
Sbjct: 192 KGITP 196
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + G+ EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 155
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + LV GL+N+G LE+A+++++ M + +L T+ +LI+ +G
Sbjct: 44 MKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGR 103
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C +++ + G + TY LI + G+ EA L + G Y
Sbjct: 104 LQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNI 163
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I +RG +D E+ KG PP++ Y TL+ + + FV+A L EMTE G
Sbjct: 164 AIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAG 223
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P ++++ L + K + QL +L+S
Sbjct: 224 YRPNIWTYNIM---LSSARKEQSVAEATQLFENLKS 256
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ Y A +++ +M + G P++ T+N ++ + K
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ ++ G ++ TY ++ + G+ EA +L ++E G P Y+
Sbjct: 244 VAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSG 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G + +A F +++ G P+ +YT L+ G+ GR EA EMT+ G
Sbjct: 304 LIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEG 363
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + ++ N G+
Sbjct: 364 FVPDGITYGILVRAFANAGR 383
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG +P + L+QG G + A ++ ++M G D+ T+N I K G
Sbjct: 114 MKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGL 173
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D TY L+ +K +A +L + E G+ P Y
Sbjct: 174 LEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNI 233
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ A + +A F +K KG PN Y+ ++++ GR G + EAA EM E G
Sbjct: 234 MLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAG 293
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
P C + +++ G H + ++
Sbjct: 294 CIP---CIIAYSGLIESYGHHGMYQE 316
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G LE ++++++M +G PD T+N+L++ K E+ + + G ++ TY
Sbjct: 172 GLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTY 231
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I++ + K + EA +L NL G P Y+ ++ R G + +A + E+
Sbjct: 232 NIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIE 291
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G P Y+ LI G G + EA +M + G+ P ++ + + D G+
Sbjct: 292 AGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCRE 351
Query: 204 AE 205
AE
Sbjct: 352 AE 353
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 67 MYYSVCKLGSCADVSTYKILIPA-VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++Y + K G A V TY ++I + + +D A RLL + E G P LY ++ G
Sbjct: 4 LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
G+ + A ++K N YT LI GR + EM + G +P S
Sbjct: 64 VNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNS 123
Query: 186 RCFDLVTDG 194
++ + G
Sbjct: 124 WTYNALIQG 132
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L++ + G + A M K G PD + + +L++ K+G
Sbjct: 289 MIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGR 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMI 96
+Y+ + K G D TY IL+ A + AG +
Sbjct: 349 CREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
>gi|225439358|ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P+ L ++ L AG LE A +V+++ + D + SL+ + + G ++
Sbjct: 834 GFTIPL-SYSLYIRALCRAGRLEEALALVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEA 892
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E S+ ++G V Y LI K + +A + E+G P Y+ +I+G
Sbjct: 893 LEKVDSMKQIGIHPTVHVYTSLIVHFFKEKQMRKALETFQKMKEEGCEPTIVTYSALIRG 952
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G F DA F +++KG P+ Y+ I+ + G+ EA L EM + G+ P
Sbjct: 953 HMAMGNFVDARNVFGLLQLKGPFPDFKTYSMFISCLCKVGKSEEALQLLSEMLDSGIIPS 1012
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ F V GL GKH LA + Q +++L+S
Sbjct: 1013 TINFRTVMFGLNREGKHSLANIVLQKKLALKS 1044
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+MI+ G PD E S ++ +C+ G++ ++CKLG +S Y + I A+ +AG
Sbjct: 794 EMIRAGYVPDKELVESYLKCLCEVGKLLDARRCTEALCKLGFTIPLS-YSLYIRALCRAG 852
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
++EA L+ + + +Y ++ G RRG+ +A +K G P VYT
Sbjct: 853 RLEEALALVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGIHPTVHVYT 912
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+LI + + +A +M E G P
Sbjct: 913 SLIVHFFKEKQMRKALETFQKMKEEGCEP 941
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 1/185 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG + A +++ + + + F +L++ +C++ + E+ + K D
Sbjct: 358 AGRIREALELIRDLNDKNLTLEPNDFETLVKGLCRADRITDAAEIV-DIMKKRKVVDAKV 416
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y I+I + I +AF +L + E G+ P S Y +++ FR ++ + E+
Sbjct: 417 YGIIISGYLRRNDIPKAFDVLQTMTESGYLPTISTYTELMQHLFRLNEYQKGCKLYDEML 476
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ T ++ R EA M E G+ + + + L + D
Sbjct: 477 ERGVEPDSVAITAMVAGHVRQNHIFEAWKVFNSMQERGIRATWKSYSVFIKELCKISRTD 536
Query: 203 LAEKI 207
K+
Sbjct: 537 EVIKV 541
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 76/170 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG ++ +L+ A + A ++ KM K G +PD+ + LI ++C + +
Sbjct: 231 MEEKGCKRDIKTWTILISHYGKAKLIGKALLILEKMWKSGCEPDVAAYMILIRSLCNAQK 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E Y + + D+S Y++L+ ++ +G I + +++ P +++
Sbjct: 291 ADIALEFYKEMVQKEMGLDMSLYELLLTCLAGSGDIAGVQLVADDMIRRSQIPERDVFSC 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
++K G+ +A ++ K + TL+ R R +AA
Sbjct: 351 MLKSFCIAGRIREALELIRDLNDKNLTLEPNDFETLVKGLCRADRITDAA 400
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++DK + LV+GL A + A ++V+ M K+ D + + +I + +
Sbjct: 371 LNDKNLTLEPNDFETLVKGLCRADRITDAAEIVDIM-KKRKVVDAKVYGIIISGYLRRND 429
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ + G +STY L+ + + + +L ++E G P
Sbjct: 430 IPKAFDVLQTMTESGYLPTISTYTELMQHLFRLNEYQKGCKLYDEMLERGVEPDSVAITA 489
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R+ +A+ F+ ++ +G Y+ I + R E L EM
Sbjct: 490 MVAGHVRQNHIFEAWKVFNSMQERGIRATWKSYSVFIKELCKISRTDEVIKVLNEMQASK 549
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ F+ V L+ G+ ++ +K+ Q++
Sbjct: 550 IIIGDEVFNWVISYLEKKGETEMVKKVMQMQ 580
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 100 FRLLHNLV----EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
FR + NL GH P + +I R G + A F+E+K PN Y
Sbjct: 713 FRSMRNLFFEMRRKGHPVTPDTWTIMIMQYGRAGLTEIALRNFAEMKANDCKPNGSTYKY 772
Query: 156 LIT-MCGRGGRFV-EAANYLMEMTEMGLTP 183
LI +CGR GR V EA +EM G P
Sbjct: 773 LIICLCGRKGRKVDEAIKTFLEMIRAGYVP 802
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 70/167 (41%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
++++ +M ++G D++T+ LI K+ + + + + K G DV+ Y ILI
Sbjct: 224 VEKLIGEMEEKGCKRDIKTWTILISHYGKAKLIGKALLILEKMWKSGCEPDVAAYMILIR 283
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
++ A D A +V+ SLY ++ G ++ + P
Sbjct: 284 SLCNAQKADIALEFYKEMVQKEMGLDMSLYELLLTCLAGSGDIAGVQLVADDMIRRSQIP 343
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
R V++ ++ GR EA + ++ + LT F+ + GL
Sbjct: 344 ERDVFSCMLKSFCIAGRIREALELIRDLNDKNLTLEPNDFETLVKGL 390
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T+N+++ ++ E ++ + + G D+ T+ ILI KA +I +A +L +
Sbjct: 207 TYNTMLYIAGEAKEFGLVEKLIGEMEEKGCKRDIKTWTILISHYGKAKLIGKALLILEKM 266
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+ G P + Y +I+ + D A F+ E+ K + +Y L+T + G G
Sbjct: 267 WKSGCEPDVAAYMILIRSLCNAQKADIALEFYKEMVQKEMGLDMSLYELLLTCLAGSG 324
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL A + A+++++ M+ G +P+ +++LI+ CK G+++ E+
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K G V TY LI A+ K +D A ++L +VE P Y +I G R
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ A S ++ KG PN YT LI G+ G+ + ++M+ G P
Sbjct: 562 IGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAP 617
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G+ P V L+ + L+ A +++++M++ P++ T+ ++I+ +C+ GE
Sbjct: 505 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGE 564
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G +V TY LI + K+G +D + +L + G P Y
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRV 624
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D+A SE+K P Y +++ G +F+ + L E+ G
Sbjct: 625 LINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQ--GFSKKFIASLGLLEELESHG 682
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
PI+ + L+ D G+ + A ++ + + L S
Sbjct: 683 TVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSS 718
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P D L+ G G +++A+++ +M K G P + T+ SLI+ + K
Sbjct: 470 MLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRR 529
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + +V TY +I + + G +A +LL + E G +P Y
Sbjct: 530 LDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTA 589
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ D + F ++ KG PN Y LI C G EA + L EM +
Sbjct: 590 LIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQ 647
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G + V L+ L A L A + N+MI G P+ T+++L++ +CK+GE
Sbjct: 349 MRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGE 408
Query: 61 VEFCVEMYYSVC----KLGS------------CADVSTYKILIPAVSKAGMIDEAFRLLH 104
++ E+Y + +GS +V TY LI + KA + +A LL
Sbjct: 409 IQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLD 468
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
++ +G P +Y +I G + G+ D+A F + G+ P YT+LI +
Sbjct: 469 AMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDR 528
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R A L +M E TP + + DGL G+ A K+
Sbjct: 529 RLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++ L A +E A + +M G +PD+ T+ LI++ CK+G
Sbjct: 279 MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGL 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + +G A+V TY L+ A KA + +A + + +++ G P Y+
Sbjct: 339 IEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSA 398
Query: 121 IIKGAFRRGQFDDAFCFFSEI----------------KIKGHPPNRPVYTTLITMCGRGG 164
++ G + G+ A ++++ PN Y LI +
Sbjct: 399 LVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAH 458
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ V+A L M G P +D + DG GK D A+++
Sbjct: 459 KVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI----KQGSD------------PD 44
M D G P LV GL AG ++ A ++ K+I GSD P+
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443
Query: 45 LETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH 104
+ T+ +LI+ +CK+ +V E+ ++ G + Y LI K G ID A +
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ + G+ P Y +I F+ + D A S++ PN YT +I R G
Sbjct: 504 RMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIG 563
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+A L M E G +P + + DGL GK DL+ ++
Sbjct: 564 ECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQL 606
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G + A Q++ M+ +G PD T++ +I +C++ +VE ++ + +G D
Sbjct: 263 LCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPD 322
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V TY ILI + KAG+I++A + G + Y ++ + Q A F+
Sbjct: 323 VYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFN 382
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+ G PPN Y+ L+ + G +A
Sbjct: 383 RMIDAGCPPNTITYSALVDGLCKAGEIQKA 412
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 40/245 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++ GL G + A ++++ M ++G P++ T+ +LI+ + KSG+
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + G + TY++LI AG++DEA LL + + + Y
Sbjct: 600 VDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCS 659
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY--------------------------- 153
+++G ++ F + E++ G P PVY
Sbjct: 660 VVQGFSKK--FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELS 717
Query: 154 -----------TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
T+LI + +A E+T G+ P F + GL K +
Sbjct: 718 SSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWN 777
Query: 203 LAEKI 207
A ++
Sbjct: 778 EALQL 782
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 41/214 (19%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G L L K+++N M+K+G +P+ FNSL+ + C + + + ++
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKA---------------------------------- 93
+ G Y I I ++
Sbjct: 200 LKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANF 259
Query: 94 -------GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
G D AF+++ ++ G P S Y+ +I + + AF F E+K G
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 319
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
P+ YT LI + G +A ++ EM +G
Sbjct: 320 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIG 353
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 88/241 (36%), Gaps = 41/241 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G NP + LV NA A +++ +M G P +N I +IC E
Sbjct: 168 MMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEE 227
Query: 61 V----------EFCVEMYYSVCKL-------------------------------GSCAD 79
+ + EM S C L G D
Sbjct: 228 LPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPD 287
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
STY +I + +A +++AF L + G NP Y +I + G + A +F
Sbjct: 288 TSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFD 347
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
E++ G N YT L+ + + +A++ M + G P + + + DGL G
Sbjct: 348 EMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAG 407
Query: 200 K 200
+
Sbjct: 408 E 408
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLET---FNSLIETICKSGEVEFCV 65
PV G LL+ AG LE A ++ +M++ S ++ + + SLI+ +C + ++E
Sbjct: 688 PVYG--LLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAF 745
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
E+Y + + G ++S + LI + K +EA +L +++ ++G N
Sbjct: 746 ELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVN 792
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 74/194 (38%), Gaps = 33/194 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
+ D G+ P + LVQ L AG ++ ++ +M + G D T + +CK G
Sbjct: 31 LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90
Query: 60 ---------------EVEFCVEM---------------YYSVCKLGSCA-DVSTYKILIP 88
+ C +M + + SC +V TY+ L+
Sbjct: 91 WSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLT 150
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
K + R+++ ++++G NP PSL+ ++ + A+ + G PP
Sbjct: 151 GFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPP 210
Query: 149 NRPVYTTLI-TMCG 161
Y I ++CG
Sbjct: 211 GYVAYNIFIGSICG 224
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 383 LKPDTGTYTMIINEF--CKKGDVWK 405
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + D A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D A L ++ G P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KFTYTTLIDGC--CKEGDLDTAFEH 339
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E+ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLM 429
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + A EM GL P F + DG
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KGF + + L+ L+ G++E A + ++ + G ++ T N ++ +CK G+
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + G D+ TY LI A S G+++EAF L++ + G +P Y
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+++ A F+E+ G P+ Y +L+ + G VE +M
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P CF + G D A
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKA 394
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF+P V + ++ GL G E AK++ +M++ G PD T+ SL+ CK G+
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + D+ + ++ +++G +D+A +++ E G P +Y
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R+G A +E+ +G + Y T++ + EA EMTE
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L P S ++ DG +C +L +E +
Sbjct: 476 LFPDSYTLTILIDG--HCKLGNLQNAMELFQ 504
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLL++ + A L A + + +G ++ N+LI ++ + G VE +Y + +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +V T I++ A+ K G +++ L + E G P Y +I +G ++
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF + + KG P Y T+I + G++ A EM GL+P S + +
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL- 347
Query: 194 GLKNCGKHDLAEKIEQLEVSLRS 216
++ C K D+ E E++ +RS
Sbjct: 348 -MEACKKGDVVET-EKVFSDMRS 368
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 91/194 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G V +++V L G +E ++++ ++G PD+ T+N+LI G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ ++ G V TY +I + K G + A + ++ G +P + Y
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ A ++G + FS+++ + P+ +++++++ R G +A Y + E G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 181 LTPISRCFDLVTDG 194
L P + + ++ G
Sbjct: 406 LIPDNVIYTILIQG 419
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 8/219 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++ P +L+ G G L++A ++ KM ++ D+ T+N+L++ K G+
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + +Y IL+ A+ G + EAFR+ ++ P +
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
+IKG R G D F ++ +G P+ Y TLI R +A + +M E
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 180 -GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
GL P ++ + G C ++ + E EV LR +
Sbjct: 651 GGLVPDVFTYNSILHGF--CRQNQMKEA----EVVLRKM 683
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V + ++ GL L A ++ N+M ++ PD T LI+ CK G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + + DV TY L+ K G ID A + ++V P P Y+
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ +G +AF + E+ K P + ++I R G + ++L +M G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 181 LTP 183
P
Sbjct: 616 FVP 618
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 2/183 (1%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G L+ A N + + G PD + LI+ C+ G + + + + + G DV T
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y ++ + K M+ EA +L + + E P +I G + G +A F ++K
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
K + Y TL+ G+ G A +M + P + ++ + L C K
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL--CSKGH 565
Query: 203 LAE 205
LAE
Sbjct: 566 LAE 568
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P +LV L + G+L A ++ ++MI + P + NS+I+ C+SG
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ G D +Y LI + + +AF L+ + E+ P + Y
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G R+ Q +A ++ +G P+R YT +I EA EM +
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Query: 179 MGLTP 183
G +P
Sbjct: 721 RGFSP 725
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 17/209 (8%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE----VEFCVEMYYSV 71
++ L+ +G L A+ + +MI++ LE NSL T G + + Y
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178
Query: 72 CKL-------------GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
KL G + LI ++ + G ++ A+ + + G
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ + F S+++ KG P+ Y TLI+ G EA + M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G +P ++ V +GL GK++ A+++
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEV 327
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 178 MLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 238 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTT 297
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G AF + + + VYT LI+ + GR V+A L EM +G
Sbjct: 298 LIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 357
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 358 LNPDTGTYTMIINEF--CKKGDVWK 380
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 88 VLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 147
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+Y L+ + G++DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 148 LRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAD 207
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 208 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 267
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 268 --CKKGDLKQ 275
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 143 ITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 202
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 203 MDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 262
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A ++ KG P++ YTTLI C + G V A + + +
Sbjct: 263 LIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQEN 322
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
+ + + GL G+ AEK+ E L V L
Sbjct: 323 IRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGL 358
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 216 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 275
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G D TY LI K G++ AF L+++ +Y +I
Sbjct: 276 AHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALIS 335
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 336 GLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 395
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 396 SVVTYNVLMNG 406
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 84/190 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P ++N+L+ + G ++
Sbjct: 112 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEG 171
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 172 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 231
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + +M+ GL P
Sbjct: 232 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 291
Query: 185 SRCFDLVTDG 194
+ + DG
Sbjct: 292 KITYTTLIDG 301
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + K +T ++E + K + Y + + G
Sbjct: 53 LITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECG 112
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 113 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGF 172
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 173 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGH 232
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 233 CKNGRVDLAMEIYKQMLS 250
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L SA + ++I++ D + +LI +C+ G
Sbjct: 283 MSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGR 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 343 SVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 402
Query: 121 IIKG 124
++ G
Sbjct: 403 LMNG 406
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ A +L A ++ +M ++G PD T+ +L++ K+G
Sbjct: 93 MRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGF 152
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++MY + + G D TY ++I + KAG + EA +L +VE G P Y
Sbjct: 153 HDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNI 212
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G + A +++++ G P+R Y+ ++ + G+ G EA EM + G
Sbjct: 213 IIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAG 272
Query: 181 LTPISRCFDLVTD 193
P + + ++ D
Sbjct: 273 WVPDAPIYGVMVD 285
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P LV AG+ ++A M KM + G PD T++ +I + K+G+
Sbjct: 128 MQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGK 187
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++++ + + G + TY I+I +K+G A +L +++ + G +P Y+
Sbjct: 188 VSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSI 247
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ + G +A F+E++ G P+ P+Y ++ M G+ A + +M + G
Sbjct: 248 MMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSG 307
Query: 181 LTP 183
LTP
Sbjct: 308 LTP 310
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
++G D+ T+ ++I + ++ E C + + + G V TY LI A +A +
Sbjct: 60 QEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLG 119
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
EA R+ + + E+G +P Y ++ + G D+A + +++ G P+ Y+ +I
Sbjct: 120 EAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVII 179
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ G+ EA EM E G P ++++ D G + +A K+
Sbjct: 180 HCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKL 229
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
E+ +++ +M ++G +P + T+N LI ++ + + ++Y + + G D TY
Sbjct: 83 FEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCT 142
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ SKAG D A + + + G P Y+ II + G+ +A F E+ +G
Sbjct: 143 LVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERG 202
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y +I + + G +V A +M + G P + ++ + L G AE
Sbjct: 203 FAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAE 262
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 87/201 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P +++ L AG + A ++ +M+++G P L T+N +I+ KSG
Sbjct: 163 MQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGN 222
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++Y + G D TY I++ + + G + EA + + + + G P +Y
Sbjct: 223 YVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGV 282
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + + A ++ ++ G PN + +L+ R +F A + M G
Sbjct: 283 MVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWG 342
Query: 181 LTPISRCFDLVTDGLKNCGKH 201
L P + ++ +H
Sbjct: 343 LVPTLQTHTILLSSCTASAQH 363
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 76/178 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF P + ++++ +G A ++ N M G PD T++ ++E + + G
Sbjct: 198 MVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGH 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M+ + + G D Y +++ KA + A +++ G P +
Sbjct: 258 LQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNS 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ R QFD AF +K G P +T L++ C + + N + +E
Sbjct: 318 LLGSYLRMQQFDLAFGVIETMKAWGLVPTLQTHTILLSSCTASAQHHQVVNLMHRSSE 375
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ--GSDPDLETFNSLIETICKS 58
M+ KG P V LV+GL G ++ A ++N ++ + PD+ FN +I+ +CK
Sbjct: 365 MAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQ 424
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
+ +YY++ + G +++ TY ILI AG + +A L + V+ G +P + Y
Sbjct: 425 RRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATY 484
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + A F++ + G P Y TL+ R +A N EM
Sbjct: 485 TVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRN 544
Query: 179 MGLTPISRCFDLVTDGLKNCG 199
P F+++ DG G
Sbjct: 545 ANHDPDVVSFNIIIDGTLKAG 565
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V L+ G + G +E K++ N+M+++ P++ T++ L+ +CK +
Sbjct: 225 MEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M ++ DV Y +L +SK G +A ++L +V+ G P Y
Sbjct: 285 WKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG--GRFVEAANYLMEMT 177
II G + G+ DDA + KG P+ Y+TL+ +CG G V+ N LM
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMS-K 403
Query: 178 EMGLTPISRCFDLVTDGL 195
E + P F+LV L
Sbjct: 404 EFHIKPDVFAFNLVIQEL 421
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+ V +LL++G +G A + M + PD ++N++I +CK +
Sbjct: 123 RGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVE 182
Query: 64 CVEMYYSVCKLGSCADVS-TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E++ + K G C S T+ LI K G ++E F LL + + G +Y+ +I
Sbjct: 183 AKELFKEM-KGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G +G + F+E+ K PN Y+ L+ + ++ EAA L MT +
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + ++ DGL G+ A K+ L V
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMV 331
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF + ++L+ G L+AG L A ++ + G P+ T+ LI +CK
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ G+ VS Y L+ ++ + +++A L + H+P +
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G + A E+ P+ ++ LI + G+ EAA+ M G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + FD + G GK
Sbjct: 617 HVPDAVLFDSLLKGYSLKGK 636
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G +E ++ +M K G + D+ +++LI C G++E E++ + +
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY L+ A+ K EA ++L + P Y + G + G+ DA
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y +I + GR +A L M + G P + + GL
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384
Query: 196 KNCGKHDLAEKIEQLEVS 213
GK D A + L +S
Sbjct: 385 CGVGKIDEAVDLLNLLMS 402
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G +P +L+ GL L AK + NK G+ P + +N+L+ ++C+ VE
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVE 533
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + DV ++ I+I KAG ++ A LL ++ P ++ +I
Sbjct: 534 QARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILI 593
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ GQ D+A + + GH P+ ++ +L+ G+ + + L +M + +
Sbjct: 594 NRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVV 653
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
S+ + L N K EKI
Sbjct: 654 LDSKLTSTILACLCNMSKDVDIEKI 678
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P V ++++ G L AG +ESAK+++ +M+ PD TF+ LI K G+
Sbjct: 542 MRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQ 601
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
++ +Y + G D + L+ S G ++ +L + +
Sbjct: 602 LDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMAD 649
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 2/208 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + L+ L A + + + +KM P + ++LIE+ + + F +
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G +V + +L+ ++G +A L + + P Y +I G +
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ +A F E+K PN ++ LI + G E L EM +MGL
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ + G C K D+ E LR
Sbjct: 237 YSALISGF--CSKGDIERGKELFNEMLR 262
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 2/171 (1%)
Query: 41 SDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
S P + N+LI+ + K+ + + ++ + + ++ LI + AF
Sbjct: 55 SIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAF 114
Query: 101 RLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+L +++ G + + ++KG + G A F +K P+ Y T+I
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+G R VEA EM P S F + DG C D+ E LE
Sbjct: 175 CKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGF--CKNGDVEEGFGLLE 223
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +L+ GL G +E A ++ +M++ P L T++SL + +CKSG
Sbjct: 349 MRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGL 408
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + M++++ G DV +Y LI + A +L+H + +G P +
Sbjct: 409 TEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNR 468
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +R + D A F+ + G N + R G F EA + E+ ++G
Sbjct: 469 LIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLG 528
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ P S +++V L C + + E L V L++
Sbjct: 529 IVPNSYTYNIVIKWL--CKEQKTEKAWEVLPVMLKN 562
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +L+ N ++ A + +MIK+G PD F +I CK G+
Sbjct: 594 MLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGD 653
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y + + G +V TY LI K +D+A L + + D P Y
Sbjct: 654 MKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTA 713
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I G G D F+E+K G PN Y TL
Sbjct: 714 LIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D G P +++++ L E A +++ M+K P +N+LI+ K
Sbjct: 524 VQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSN 583
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + K+G + TY +LI S + EA+ L +++ G P ++
Sbjct: 584 PTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTC 643
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G A+ + E+ G PN YT LI + R +A +M
Sbjct: 644 IIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDN 703
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+TP + + G ++ G D
Sbjct: 704 VTPDGLTYTALIFGYQSLGYSD 725
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + GL AG +E A +++ + + + +N++I C++GE
Sbjct: 279 MEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGE 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G +Y ILI + K G +++A L+ +V+ P Y+
Sbjct: 339 LHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSS 398
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + G + + F + +G+ + Y TLI A + EM G
Sbjct: 399 LFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNG 458
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P S F+ + G C + L + +E + L+
Sbjct: 459 SVPNSFTFNRLIHGF--CKRQRLDKALEVFTIMLK 491
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 35/231 (15%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ V + L+ G + + SA ++V++M GS P+ TFN LI CK ++
Sbjct: 422 EGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDK 481
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG------------- 110
+E++ + K+G ++ T I+ ++ G EA +L++ + + G
Sbjct: 482 ALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIK 541
Query: 111 --------------------HNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+N FP Y +I G ++ A ++++ G PP
Sbjct: 542 WLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPP 601
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+ YT LI M + EA EM + GL P F + G G
Sbjct: 602 SIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVG 652
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++ L A + + + G + ++ + N L+ ++ + EF ++ +
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241
Query: 74 LGSCADVSTYKILIPAVSKAGM-----IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
G +V TY I++ K I +A +L + +G +P Y I G R
Sbjct: 242 SGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRA 301
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
G + A +++I+ P N Y +I R G EA L +M G++P + +
Sbjct: 302 GCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSY 361
Query: 189 DLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++ DGL C K + + ++ +E ++S
Sbjct: 362 SILIDGL--CKKGQVEKALDLIEEMVQS 387
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G+ A +++N++ G P+ T+N +I+ +CK + E E+ + K Y
Sbjct: 512 GHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHY 571
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI +K +A L +++ G P Y +I R + +A+ F E+
Sbjct: 572 NTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIK 631
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
KG P+ ++T +I + G A EM++ G +P + + DG + D
Sbjct: 632 KGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDK 691
Query: 204 AE 205
A+
Sbjct: 692 AD 693
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++L+ G G L A + ++M K G + T+NSLI+ +CK G+
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ EM++ + G C DV TY LI S AG + L + + G P + + P
Sbjct: 468 LKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHP 527
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G F+E+ P+R VY +I G +A + EM +MG
Sbjct: 528 LISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMG 586
Query: 181 LTPISRCFD 189
+ P ++ ++
Sbjct: 587 VRPDNKTYN 595
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++ ++ A++ V KM+ +G P +ET+N LI+ +
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
C ++ + + G +V +Y LI + K G I EA +L ++V G P ++Y
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ G+ +A FF E+ G Y +LI + G+ EA +T G
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482
Query: 181 LTPISRCFDLVTDGLKNCG 199
P ++ + G N G
Sbjct: 483 HCPDVITYNSLISGYSNAG 501
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G P + +V G G ++ A + +M +G P+ FNS+I+ C+
Sbjct: 268 LVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQM 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + G V TY ILI + + F++L + E+G P Y
Sbjct: 328 IDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGS 387
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A ++ +G PN +Y LI G+ EA + EM++ G
Sbjct: 388 LINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNG 447
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GL GK AE++
Sbjct: 448 IGATIVTYNSLIKGLCKMGKLKEAEEM 474
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G G ++ + + N+M++ PD +N++I ++G
Sbjct: 513 MKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGH 571
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + +G D TY LI K G + E L+ ++ G P Y+
Sbjct: 572 VQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSL 631
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F+ A+ ++ E+ G PN + L T + GR EA + EM G
Sbjct: 632 LIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691
Query: 181 LTPISRCFDL 190
+ + DL
Sbjct: 692 MDNLDTNEDL 701
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++L+ GL + A+++ +M + P+ TFN+LI+ CK+GE
Sbjct: 92 MKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGE 151
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + K + T+ L+ + KA I+EA +L+ + +G P Y+
Sbjct: 152 VDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSI 211
Query: 121 IIKGAFRRGQFDD----AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
I G + DD A + E KG + + L+ + G+ +A L +
Sbjct: 212 IFDGLLKS---DDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSL 268
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLA-EKIEQLE 211
E GL P ++ + +G G D A IEQ+E
Sbjct: 269 VEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME 304
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 88/235 (37%), Gaps = 42/235 (17%)
Query: 5 GFNPPVRGRDLLVQGLLN----AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
GF P ++ GLL AG +A + + I +G D T + L+ +CK G+
Sbjct: 201 GFVPDGFTYSIIFDGLLKSDDGAG---AALDLYREAIGKGVKIDNYTCSILLNGLCKEGK 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG-------------------------- 94
VE E+ S+ + G Y ++ + G
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNS 317
Query: 95 ---------MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
MID+A + +V G P Y +I G R F F E++ G
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG 377
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
PN Y +LI + G+ +EA L +M G+ P + ++++ DG GK
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGK 432
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
++ + M ++G P ++E++ +S + + ++++ + LG D Y + A
Sbjct: 17 ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
K G + A L + P +Y +I G + + DA F E+ ++ PNR
Sbjct: 77 VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ TLI + G A M + + P F+ + GL
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGL 181
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + L++GL G + A Q++N+M ++G PD+ T+N +I +CK G +
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ G D+ TY L+ + +D A L++ + G P Y ++
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++ F + KG PN Y T+I + EA + L EM GLTP
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTP 643
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
F + G G D A
Sbjct: 644 DVVSFGTLITGFCKVGDLDGA 664
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + ++ +QGL G L+ A +++ + ++G PD+ T+N++I +C+ V
Sbjct: 324 RGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVE 383
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E + + G + TY +I K GM+ +A R+L + V G P Y ++
Sbjct: 384 AEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVN 443
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G D A F + KG P+ VY TLI + G + A + EM E G P
Sbjct: 444 GFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKP 503
Query: 184 ISRCFDLVTDGL 195
++L+ +GL
Sbjct: 504 DIWTYNLIINGL 515
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 38/240 (15%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + LV G L+SA ++VN+M QG PD+ T+N+L+ +CK+ + E
Sbjct: 534 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 593
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E++ ++ + G ++ TY +I ++ + ++EA LL + G P + +I
Sbjct: 594 VMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 653
Query: 124 GAFRRGQFDDAFC------------------------------------FFSEIKIKGHP 147
G + G D A+ FSE+K G
Sbjct: 654 GFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCD 713
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P+ Y LI + G + +L+E E G P F V + L C +H + E +
Sbjct: 714 PDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL--CVEHKVQEAV 771
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P + +L++ GL G L A ++ I +G PD+ T+N+L++ C+ +
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + G DV TY L+ + K +E + + E G P Y
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
II+ + ++A E+K KG P+ + TLIT
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 653
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V G G + A+++ ++M++ PD+ TFN L+ +CK G V ++ V K G
Sbjct: 266 VVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRG 325
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
C ++ T+ I I + K G +D A RLL + +G P Y +I G R+ + +A
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE 385
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G PN Y ++I + G V+A L + G P + + +G
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445
Query: 196 KNCGKHDLA 204
G D A
Sbjct: 446 CQDGDPDQA 454
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P LV G G + A + + +G P + +N+LI+ +C+ G +
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 488
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ TY ++I + K G + +A L+ + + G P Y ++
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 548
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R+ + D A + + +G P+ Y TL+ + + E MTE G P
Sbjct: 549 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608
Query: 184 ISRCFDLVTDGLKNCGK 200
++ + + L N K
Sbjct: 609 NIITYNTIIESLCNSKK 625
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P + ++ G G + A +++ + +G PD T+ SL+ C+ G+
Sbjct: 391 MVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGD 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ G + Y LI + + G+I A +L++ + E G P Y
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G DA + KG P+ Y TL+ R + A + M G
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
+TP ++ + +GL K +
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSE 592
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 35/223 (15%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE------ 60
+P V + ++ L+ GY A ++ +M + + D+ T+ I++ C++G
Sbjct: 187 DPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALR 246
Query: 61 --------------VEFCV---------------EMYYSVCKLGSCADVSTYKILIPAVS 91
V +C E++ + + C DV+T+ L+ A+
Sbjct: 247 LLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALC 306
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
K G + E+ RL +++ G P + I+G + G D A + +G P+
Sbjct: 307 KKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVV 366
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
Y T+I R R VEA L +M G P ++ + DG
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDG 409
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 76/184 (41%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G ++ A +M DP + ++N+++ + + G ++Y + +DV TY
Sbjct: 169 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I I + + G A RLL N+ G Y ++ G + G D A F E+
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
P+ + L+ + G +E+ ++ + G+ P F++ GL G D
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDR 348
Query: 204 AEKI 207
A ++
Sbjct: 349 AVRL 352
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +GF P V L+ GL L A + + M+ +G P+ T++SLI +C G
Sbjct: 106 MTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMI---DEAFRLLHNLVEDGHNPFPSL 117
+ + ++Y++ D T+ L+ A+ K GMI D+A L + + G P
Sbjct: 166 WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVT 225
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G G+ DA F E+ + G P+ Y L + R EA L +
Sbjct: 226 YNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 285
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + +V DG+ G+ + A +
Sbjct: 286 GTNLDPDIHIYSIVMDGMCRAGELEAARDL 315
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 5/211 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P L++GL G + A Q+ +KM +G PD+ T+ +LI +CK ++
Sbjct: 75 GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEA 134
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G + TY LI + G EA RL + ++ P + ++
Sbjct: 135 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 194
Query: 125 AFRRGQF---DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G D A F E+ +G P+ Y TLI GR +A EM G
Sbjct: 195 LCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQ 254
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + ++ D L C H LAE + L+V
Sbjct: 255 IPDLVTYRILFDYL--CKNHRLAEAMVLLKV 283
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A + +M +QG PD T+N+LI +C G + + +++ + G D+ TY+I
Sbjct: 204 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 263
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L + K + EA LL + +P +Y+ ++ G R G+ + A FS++ KG
Sbjct: 264 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 323
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
P+ YT +I + G EA+ EM E
Sbjct: 324 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P L+ GL G+ + A ++ MI + PD TFN+L++ +CK G
Sbjct: 141 MLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGM 200
Query: 61 VEF---CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
++ + ++ + + G D TY LI + G + +A L H +V G P
Sbjct: 201 IQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 260
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y + + + +A I+ P+ +Y+ ++ R G A + +++
Sbjct: 261 YRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLS 320
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAE 205
GL P R + ++ +GL C + LAE
Sbjct: 321 SKGLHPDVRTYTIMINGL--CQQGLLAE 346
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + L+ + + + + +M G + T N LI + C + F +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ KLG +T+ LI + G I EA +L + +G P Y +I G +
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
Q +A FS++ KG PN Y++LI G + EA M + P
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 188 FDLVTDGLKNCGKHDLAEK 206
F+ + D L G + +K
Sbjct: 188 FNTLVDALCKEGMIQIMDK 206
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 72/160 (45%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M++ P + F+ L+ +I + + +Y + G + T ILI +
Sbjct: 1 MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+ AF +L ++++ G+ P + + +I+G G+ +A F ++ +G P+ Y T
Sbjct: 61 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
LI + + EA + +M G++P + + + GL
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGL 160
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 35/161 (21%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK--- 57
MS +G P + L+ GL + G L A + ++M+ G PDL T+ L + +CK
Sbjct: 214 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 273
Query: 58 --------------------------------SGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+GE+E +++ + G DV TY I
Sbjct: 274 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 333
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+I + + G++ EA +L + E+ + + KG F
Sbjct: 334 MINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFKGIF 374
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGK 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+Y + G D TY LI + K G + +A L + G P Y
Sbjct: 257 LDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLV 191
L P + + +V
Sbjct: 377 LKPDTGTYTIV 387
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +DEA +L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ +G P+ Y TLI + G +A + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G +C + DL E
Sbjct: 320 G--SCKEGDLETAFE 332
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G + T+ LI K G +D A + ++ G +P Y
Sbjct: 222 MDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLK 378
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ L FN L++ CK GE+ ++ + K G
Sbjct: 107 VLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ K G +DE FRL + G P Y+ +I G + + D+A
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAH 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +G PN +TTLI + G+ A +M G +P ++ + GL
Sbjct: 227 KLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CKKGDLXQ 294
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+ G G L+ A ++ +M+ QG PD T+N+LI +CK G+
Sbjct: 232 MLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT ++ + G + L EM G
Sbjct: 352 LISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 HVP 414
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + +
Sbjct: 72 LITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEILECR 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + EA EM + GL P F + DG
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKIEQLEVS 213
GK DLA +I + +S
Sbjct: 252 CKNGKLDLAMEIYKQMLS 269
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P LL++ L N G A + + M +G PD T+ SLI C +G
Sbjct: 210 MIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGR 269
Query: 61 VEFCVEMYYSVCKLGSCA--DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
+ ++ V + G A D Y +LI + +A ++EA + +V+ G P Y
Sbjct: 270 ITEAKVLFKEVLE-GEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTY 328
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G F+ + D A F ++ KG PN +Y+T I + G+ EA + + E
Sbjct: 329 NALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVE 388
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + ++ + GL + D A ++
Sbjct: 389 RGCVPDNVTYNALIRGLFGANRMDEAHRL 417
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ L+ G A ++V +MIK+ S PD T+ +LI +CK +
Sbjct: 110 GSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKK-SVPDGMTYTALISVLCKHNRADDA 168
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + + +V Y L+ A + +D A+RL +++ G+ P S Y +++
Sbjct: 169 MKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRC 228
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G+ A+ S ++ +GH P+ Y +LI C GR EA E+ E
Sbjct: 229 LCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLE 282
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
M +G P L+ G AG + AK + ++++ + + D +N LIE +C++
Sbjct: 245 MRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRAS 304
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+VE +E+ + G + TY LI KA +D+A +L + E G +P +Y+
Sbjct: 305 KVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYS 364
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I G + G+ ++A FF + +G P+ Y LI R EA EM E
Sbjct: 365 TFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGER 424
Query: 180 G 180
G
Sbjct: 425 G 425
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++GL A +E A ++ M+ +G P L+T+N+LI K+ EV+ ++++ ++ +
Sbjct: 294 NVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEE 353
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + Y I + K G I+EA VE G P Y +I+G F + D+
Sbjct: 354 KGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDE 413
Query: 134 AFCFFSEIKIKGHPPNRPVYT 154
A + E+ +G+ +R + T
Sbjct: 414 AHRLYREMGERGYIADRSLRT 434
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +LLV+GL ++ A+ M++ M+ +G DPD+ T L++ C+
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + G + Y ++ A+ +G D F+ V DG P Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A E+ IK P+ YT LI++ + R +A M E
Sbjct: 121 MLDCLIKTGKTREASEVVGEM-IKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 181 LTP 183
+ P
Sbjct: 180 IVP 182
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P ++ + L+ G A ++ A Q+ M ++G P+ +++ I+ +CK G+
Sbjct: 316 MVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGK 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + + G D TY LI + A +DEA RL + E G+ SL
Sbjct: 376 INEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSLRTL 435
Query: 121 IIKGAFRRGQFDDAF 135
AF+R + + +F
Sbjct: 436 ----AFQRSREEQSF 446
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ +G + + + + GS P + + ++++ + K+G+ E+ + K
Sbjct: 86 ILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIK-K 144
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S D TY LI + K D+A ++ +VE P +Y ++ R + D A+
Sbjct: 145 SVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAY 204
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F E+ +G+ P+ Y L+ GGR A + M G P
Sbjct: 205 RLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVP 252
>gi|302814999|ref|XP_002989182.1| hypothetical protein SELMODRAFT_129427 [Selaginella moellendorffii]
gi|300143082|gb|EFJ09776.1| hypothetical protein SELMODRAFT_129427 [Selaginella moellendorffii]
Length = 614
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
VR +++V L G ++ A ++V+ M+ +G PD T NSL++ + K +VE +++Y
Sbjct: 9 VRTCNIMVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYE 68
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS--LYAPIIKGAFR 127
+ + AD TY IL+ + KAG I EA + L + D P LY +I G +
Sbjct: 69 KMSRSFVKADAFTYNILLHGLCKAGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCK 128
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G++D A F ++K+ P+ Y +I C + GR A EM P
Sbjct: 129 VGKYDHAMAVFRKMKL----PSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFT 184
Query: 188 FDLVTDGLKNCGKH----DLAEKIEQLEVS 213
F+ V L GK D+ +++ L+ S
Sbjct: 185 FNTVIQSLSKAGKFKEALDIVDEMVWLQCS 214
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 100/205 (48%), Gaps = 3/205 (1%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCV 65
+P +R ++++ GL A + A +V +M + G PD TFN++I+ K+G+ + +
Sbjct: 251 DPNLRTFNIMIHGLCKANKVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAL 310
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + +LG C T ++ + KAG +D A L+ + +Y +I
Sbjct: 311 SLFKEMARLGRCRCSVTLNTVVTGLCKAGEVDRAVTLVRDSA-SARQATVFMYNVVIDKF 369
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE-MGLTPI 184
+ G+F+ + F E+ G P+ +T L++ + R EA + +MT+ G +
Sbjct: 370 AKLGRFEASKQLFQEMSRFGCHPDSVTFTILVSESCKQRRTHEALELVEQMTKNKGCSWT 429
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ F++V + L G+ + A K+ +
Sbjct: 430 TLPFNMVLNALAKSGEMEAAGKVHR 454
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + L+ GL +E A ++ KM + D T+N L+ +CK+G
Sbjct: 35 MMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSRSFVKADAFTYNILLHGLCKAGR 94
Query: 61 V-EFCVEMYYSVC-KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
+ E C ++ ++ + Y+ LI + K G D A + + P Y
Sbjct: 95 IQEACQKLSAALRDREAPVRHELLYEALIGGLCKVGKYDHAMAVFRKM----KLPSSMSY 150
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I +RG+ + A F E+K+K P+ + T+I + G+F EA + + EM
Sbjct: 151 NIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVIQSLSKAGKFKEALDIVDEMVW 210
Query: 179 MGLTPISRCFDLVTDGL 195
+ +P F L+ GL
Sbjct: 211 LQCSPNELTFGLLVHGL 227
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 95/211 (45%), Gaps = 3/211 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++++ + G E+A ++ +M + PD+ TFN++I+++ K+G+ + +++
Sbjct: 145 PSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVIQSLSKAGKFKEALDI 204
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGA 125
+ L + T+ +L+ + KA EA +L + G P P+L + +I G
Sbjct: 205 VDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDTVGCVPDPNLRTFNIMIHGL 264
Query: 126 FRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + +A ++ + G P+ + T+I + G A + EM +G
Sbjct: 265 CKANKVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGALSLFKEMARLGRCRC 324
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
S + V GL G+ D A + + S R
Sbjct: 325 SVTLNTVVTGLCKAGEVDRAVTLVRDSASAR 355
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV T I++ ++ K G++D+A L+H +++ G P ++ G F+ + + A +
Sbjct: 8 DVRTCNIMVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY 67
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR--CFDLVTDGLK 196
++ + Y L+ + GR EA L P+ ++ + GL
Sbjct: 68 EKMSRSFVKADAFTYNILLHGLCKAGRIQEACQKLSAALRDREAPVRHELLYEALIGGLC 127
Query: 197 NCGKHDLA 204
GK+D A
Sbjct: 128 KVGKYDHA 135
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 5/188 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
MS G +P +LV A ++V +M K +G FN ++ + KSG
Sbjct: 385 MSRFGCHPDSVTFTILVSESCKQRRTHEALELVEQMTKNKGCSWTTLPFNMVLNALAKSG 444
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID--EAFRLLHNLVEDGHNPFPSL 117
E+E +++ S+ G D+ TY L+ AG + +R+ L+ G P
Sbjct: 445 EMEAAGKVHRSMKVAGIECDLVTYNTLLDGYFGAGRARSGDGYRVFGELLHSGCAPDTLS 504
Query: 118 YAPIIKGAFRRGQFDDAFC-FFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLME 175
+ ++ G+ ++A F+ E++ + P+ + L+ C + A + E
Sbjct: 505 FNALLGCLCCDGRLEEAVAKFWGEMRERRECWPDAVTHALLVRQCCKQRNIELACRIVDE 564
Query: 176 MTEMGLTP 183
M G P
Sbjct: 565 MLHRGFVP 572
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G L+ GL AG L+ A +++ +M+ +G D D+ T+ LI+ CK G
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + +V TY L + K G + A LLH + G Y
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A +E++ GH + YTTLI + G F A N L EM + G
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++++ +G G+ + +K+
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKL 589
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG + V +L+ G G + A ++ N+M+ + P++ T+ +L + +CK G+
Sbjct: 418 MVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+ + +C G +V TY LI + K G +++A R++ + GH Y
Sbjct: 478 VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTT 537
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEM 179
+I + G+FD A E+ KG P+ Y L+ GR VE L+E M E
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGR-VEGGKKLLEWMLEK 596
Query: 180 GLTP 183
+ P
Sbjct: 597 NVRP 600
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 12 GRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV 71
++L++ LL+AG L+ A Q ++M S PD+ T+ +++ C GE+E V++ +
Sbjct: 257 SHNILLKALLSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEM 313
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
G ++ + Y +I + G + +A R+L ++ G ++ +I G +G
Sbjct: 314 AAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDL 373
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A F E++ +G +R +T LI R G EA L EM + GL + ++
Sbjct: 374 AAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVL 433
Query: 192 TDGLKNCGKHDLAE 205
DG C + ++ E
Sbjct: 434 IDGY--CKRGNMVE 445
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++L+ G +G +E K+++ M+++ P++ T+NSL++ C
Sbjct: 558 MLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + + +TY ILI KA + EA ++E G S Y+
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA 677
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+I+ ++ +F +A FF +++ +G VY+
Sbjct: 678 LIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYS 711
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG ++ L N G + A +++ M G D F ++I C G+
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K G AD T+ LI + +AG + EA R+L +V+ G + Y
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLM-EMTE 178
+I G +RG +AF +E+ + PN YT L +C +G V AAN L+ EM
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD--VRAANELLHEMCN 490
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GL ++ + +GL G + A +I
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRI 519
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG V + L+ GL G LE A +++ +M G D+ T+ +LI+T+CKSGE
Sbjct: 488 MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE 547
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M + G ++TY +L+ +G ++ +LL ++E P Y
Sbjct: 548 FDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNS 607
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K + + + PN Y LI + EA + EM E G
Sbjct: 608 LMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKG 667
Query: 181 L 181
L
Sbjct: 668 L 668
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 6/219 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L GL G + +A +++++M +G + ++ T+NSLI +CK G
Sbjct: 453 MVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGN 512
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G DV TY LI + K+G D A +L +++ G P + Y
Sbjct: 513 LEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNV 572
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + + K PN Y +L+ M
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI----EQLEVSLR 215
+ P ++++ G +C ++ E + E +E LR
Sbjct: 633 VAPNENTYNILIKG--HCKARNMKEALYFHQEMIEKGLR 669
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 76/174 (43%), Gaps = 3/174 (1%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
+ ++ D ++ + N L++ + +G ++ + + ++ S DV TY ++ G
Sbjct: 246 LFRELPDKNVCSHNILLKALLSAGRLKDACQHFD---EMSSPPDVVTYGTMVHGYCVRGE 302
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++ A +LL + G ++Y +I +GQ DA ++ + G + V+TT
Sbjct: 303 LENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTT 362
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+I+ G A EM + GL + +GL G+ A+++ Q
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQ 416
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + GF P + + L+ G AG + A ++ +M K P+ +F LI++ CK+ +
Sbjct: 295 IKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEK 354
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G ADV TY LI K G D+A+ +L ++++ GH+P Y
Sbjct: 355 MDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLC 414
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + ++ E++ G P+ +Y T+I + + G EA EM G
Sbjct: 415 IMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGG 474
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P + L+ G + G
Sbjct: 475 LNPGLDTYILMVHGFLSQG 493
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 93/246 (37%), Gaps = 37/246 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V L+ G G + A ++++ MI++G DP ++ ++ K E
Sbjct: 365 MQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEE 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E C+E+ + K+G D++ Y +I V K G + EA RL + G NP Y
Sbjct: 425 LEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYIL 484
Query: 121 IIKGAFRRGQFDDAFCFFSE-------------------------------------IKI 143
++ G +G +A +F E +
Sbjct: 485 MVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTT 544
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
KG N +T I G EA +Y ++M + L P F + GLK L
Sbjct: 545 KGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQL 604
Query: 204 AEKIEQ 209
A +I +
Sbjct: 605 AVEITE 610
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 1/193 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ + ++ A +++++M K G +PD F L++ +CK+G V+ ++ + ++
Sbjct: 205 VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RV 263
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
++ + L+ + G I EA +L + E G P +Y ++ G + G+ DA
Sbjct: 264 RFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDA 323
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F +E+K PN +T LI + + EA EM G + + G
Sbjct: 324 FDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISG 383
Query: 195 LKNCGKHDLAEKI 207
G D A +I
Sbjct: 384 FCKWGNTDKAYEI 396
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++GF P + +V G + G ++SA + +M + G P++ T+ SLI CKS ++
Sbjct: 562 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 621
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + + G DV+ Y LI K ++ A L L+E G +P +Y +I
Sbjct: 622 LALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMI 681
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + A ++ ++ P + YTTLI + GR V A++ MEM G+
Sbjct: 682 SGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIV 741
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P F ++ +GL N G+ + A KI
Sbjct: 742 PDIITFHVLVNGLCNKGQLENARKI 766
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++ G P +L++G N+G +E A ++ +M G P + NSL+ K+
Sbjct: 351 ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPL 410
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ G A++ TY I++ + K G +DEA LL N+V G P Y
Sbjct: 411 WEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G D A FS++ + PN Y+ LI + G +A + +M +
Sbjct: 470 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 529
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+ + +GL G+
Sbjct: 530 IAPTDFTFNTIINGLCKVGQ 549
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 6/218 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + ++ G G ++ A + + M+ + P++ T++ LI+ K G+
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 514
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++++ + L T+ +I + K G + EA L N +E+G P Y
Sbjct: 515 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNS 574
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G D A + E+ G PN YT+LI + R A EM E G
Sbjct: 575 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 634
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK----IEQLEVSL 214
L + + DG C + D+ E LEV L
Sbjct: 635 LELDVTAYSALIDGF--CKRRDMESAQDLFFELLEVGL 670
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + ++ G + +E+A KMI DL T+ +LI+ + K G + F
Sbjct: 669 GLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 728
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + G D+ T+ +L+ + G ++ A ++L + P +Y +I G
Sbjct: 729 SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 788
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
FR G +AF E+ +G P+ Y LI +G R
Sbjct: 789 YFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG V L+ G +ESA+ + ++++ G P+ +NS+I
Sbjct: 630 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + Y + D+ TY LI + K G + A L ++ G P +
Sbjct: 690 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 749
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +GQ ++A E+ K P+ +Y TLI R G EA EM + G
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809
Query: 181 LTPISRCFDLVTDG 194
L P +D++ +G
Sbjct: 810 LVPDDVTYDILING 823
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L++G L A E A ++ ++ + G ++ T+N ++ +CK G+
Sbjct: 386 MKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGK 444
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ G +V +Y +I + G +D A + +++ P Y+
Sbjct: 445 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 504
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F++G + A F ++ P + T+I + G+ EA + L E G
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + DG G D A
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSA 588
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ L+ + + + NKM+ +G D T + ++ K G VE E
Sbjct: 183 PWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEY 242
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D Y I+I AV K + LL + E G P + + +I
Sbjct: 243 FRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA 302
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G +A E+ G P N V T+L+ G A N ++TE GL P
Sbjct: 303 QGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVT 362
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ ++ +G N G + A ++
Sbjct: 363 YSVLIEGCCNSGNIEKASEL 382
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++V+ L G +E A++ + ++G D ++ +I+ +CK +E+ + +
Sbjct: 225 VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKER 284
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +T+ +I A G + EA RL ++ G + ++KG +G D A
Sbjct: 285 GWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSA 344
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F++I G PN+ Y+ LI C G +A+ +M G+ P
Sbjct: 345 LNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 393
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 84/193 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ L G ++ A +++ M+ QG P++ ++N +I C+ G ++ ++ +
Sbjct: 433 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 492
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+V TY ILI K G ++A L ++ P + II G + GQ +
Sbjct: 493 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 552
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A +G P+ Y +++ + G A EM E G++P + + +
Sbjct: 553 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 612
Query: 194 GLKNCGKHDLAEK 206
G + DLA K
Sbjct: 613 GFCKSNRIDLALK 625
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 68/167 (40%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ + A +E+A N MI Q P + N L+ + + + ++Y +
Sbjct: 154 NYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVL 213
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D T +++ A K G ++EA E G Y+ II+ ++ +
Sbjct: 214 RGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNL 273
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
E+K +G P+ +T++I C G VEA EM G
Sbjct: 274 GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG 320
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 89/207 (42%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ P ++ + G + A ++ +MI G +L SL++ C G
Sbjct: 281 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G + TY +LI +G I++A L + +G P
Sbjct: 341 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + +++A F E + N Y +++ +GG+ EA + L M G
Sbjct: 401 LLRGYLKAPLWEEASKLFDE-AVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 459
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G G D+A +
Sbjct: 460 MVPNVVSYNDMILGHCRKGNMDMASSV 486
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
+++ +M ++G P TF S+I G + + + + G ++ L+
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 335
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
G +D A L + + EDG P Y+ +I+G G + A ++++K+ G PP+
Sbjct: 336 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 395
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+L+ + + EA+ E + G+ I ++++ L GK D A
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF-TYNIMMSWLCKGGKMDEA 448
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKS 58
M++ G P V ++L++GL + + A ++++ M G D PD+ +++++I+ + K
Sbjct: 160 MTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKE 219
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+ + Y+ + + G DV TY ++ A+ KA +D+A +L+ +V++G P Y
Sbjct: 220 GDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITY 279
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ G GQ +A ++ G P+ YT+L+ + GR +EA L M +
Sbjct: 280 NSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIK 339
Query: 179 MGLTP 183
GL P
Sbjct: 340 RGLKP 344
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
M+D G + P V ++ GL G + A ++M+++G PD+ T+N+++ +CK+
Sbjct: 195 MADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKA 254
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
++ +++ + K G D TY ++ +G EA +L + DG P Y
Sbjct: 255 QAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTY 314
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + G+ +A + +G PN Y+TL+ G VE + L M
Sbjct: 315 TSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMQN 374
Query: 179 MGLTPISRCFDL 190
S C DL
Sbjct: 375 EAAKINSGCSDL 386
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
SD P + +L+ AG L+ + +IK+G + F L++++C
Sbjct: 90 SDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRT 149
Query: 62 EFCVEMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
+ + + +LG V +Y IL+ + EA LLH + +DG + P + Y
Sbjct: 150 SNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSY 209
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ II G F+ G D A+ + E+ +G P+ Y T++ + +A + L M +
Sbjct: 210 STIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVK 269
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
G+ P ++ + G + G+
Sbjct: 270 NGVMPDCITYNSIVHGYCSSGQ 291
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L NA + A + ++ + P + +NS+I + G+ E E+Y + G
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220
Query: 76 SC-ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
C D TY LI A K G D A RLL+ + ++G P +Y +I F+ A
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E++ + P+ YT LI G+ GRF EA N+ EM G P + + + +
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINF 340
Query: 195 LKNCGKHDLAEKI 207
L G+ D A K+
Sbjct: 341 LGKAGRLDDAVKL 353
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 1/198 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L++GL AG + A ++M ++G PD N++I + K+G ++ V++
Sbjct: 294 PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKL 353
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKA-GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + L V TY +I A+ ++ I E + G +P P Y+ +I G
Sbjct: 354 FEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFC 413
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ + + A E+ KG PP Y +LI G+ R+ A E+ E + +R
Sbjct: 414 KTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSAR 473
Query: 187 CFDLVTDGLKNCGKHDLA 204
+ ++ L G+ D A
Sbjct: 474 VYAVMIKHLGKAGRLDDA 491
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF P L+ L A + A ++ ++ + + +I+ + K+G
Sbjct: 428 MDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGR 487
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V ++ + KLG +V Y L+ +++AGM+DEA + + E G P + Y
Sbjct: 488 LDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNI 547
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G A S +K P+ Y T++ G F EAA + EM +G
Sbjct: 548 ILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLG 607
Query: 181 LTPISRCFDLVTDG--LKNCGKHD 202
+DL+T L+ GK D
Sbjct: 608 FE-----YDLITYSSILEAIGKVD 626
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 8 PPVRGRDLLVQGLLNA-GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V + +++ L + + +M G P T++ LI+ CK+ E +
Sbjct: 364 PSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMM 423
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + G + Y LI A+ KA D A L L E+ + +YA +IK
Sbjct: 424 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLG 483
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ DDA F E+ G PN Y L++ R G EA + M E G P
Sbjct: 484 KAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDIN 543
Query: 187 CFDLVTDGL-KNCGKHDLAEKIEQLEVS 213
++++ +GL K G H E + ++ S
Sbjct: 544 SYNIILNGLAKTGGPHRAMEMLSNMKQS 571
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + +L+ + A + +M Q PD+ T+ LI + K+G
Sbjct: 252 MKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGR 311
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G D +I + KAG +D+A +L + P Y
Sbjct: 312 FDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNT 371
Query: 121 IIKGAFR-RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
IIK F + + + +F +K G P+ Y+ LI + R +A L EM E
Sbjct: 372 IIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEK 431
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G P + + D L ++D+A ++ Q
Sbjct: 432 GFPPCPAAYCSLIDALGKAKRYDIAHELFQ 461
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 1 MSDKGF-NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
MS++G P L+ G +SA +++N+M G P + + LI K
Sbjct: 216 MSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLN 275
Query: 60 EVEFCV----EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
V + EM + C+ DV TY LI + KAG DEA+ H + +G P
Sbjct: 276 NVHGALGLFEEMRHQYCR----PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDT 331
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLM 174
+ +I + G+ DDA F E+ P+ Y T+I + R E +++
Sbjct: 332 VVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFE 391
Query: 175 EMTEMGLTPISRCFDLVTDGL 195
M G++P + ++ DG
Sbjct: 392 RMKGSGISPSPFTYSILIDGF 412
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 86/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P +L+ G E A ++ +M ++G P + SLI+ + K+
Sbjct: 393 MKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 452
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + + Y ++I + KAG +D+A L + + G P Y
Sbjct: 453 YDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNA 512
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G D+A ++ G P+ Y ++ + G A L M +
Sbjct: 513 LMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSA 572
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ V + + G + A K+
Sbjct: 573 IKPDAVSYNTVLGAMSHAGLFEEAAKL 599
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++MI G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YMP 414
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL L+ A ++ ++M+ G P+ +F +LI+ CK G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L++ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + ++ LI K G +D A + ++ +P Y
Sbjct: 222 LDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A +E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + +FN+L+ K G++ + ++
Sbjct: 140 NILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G +C + DL E
Sbjct: 320 G--SCKEGDLETAFE 332
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + CK GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G ++E FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C DL +
Sbjct: 277 ITYNTLIYGL--CKNGDLKQ 294
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK+G+
Sbjct: 232 MLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + + EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YVP 414
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++N+M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLMKEMQRDGYVPS 415
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF+P + + L+ G L+ A + M ++G PDL ++ +L+ +CK G
Sbjct: 284 MEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGR 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++++ + G D+ TY LI K G + E+ LLH+++ +G +P
Sbjct: 344 VREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWV 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + G+F A E++ G ++ +Y+ LI R R A N L M++ G
Sbjct: 404 LVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDG 463
Query: 181 LTP 183
P
Sbjct: 464 HKP 466
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L L G + + KM ++G DPD+ T+N+LI + C+ G
Sbjct: 249 MERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGR 308
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y + + G D+ +Y L+ + K G + EA +L H +V G +P Y
Sbjct: 309 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 368
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++ ++ G P+ L+ G+ G+F+ A N ++E+ G
Sbjct: 369 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 428
Query: 181 LT 182
++
Sbjct: 429 VS 430
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V + L+ GLL Y + ++ +M + G P+L TFN L +CK G+
Sbjct: 218 GFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKV 277
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G D+ TY LI + + G +D+AF L + G P Y ++ G
Sbjct: 278 NKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNG 337
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +A F + +G P+ Y TLI + G+ E+ + L +M G++P
Sbjct: 338 LCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 397
Query: 185 S-RCFDLV 191
S C+ LV
Sbjct: 398 SFTCWVLV 405
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D ++P V D+LV+ L G + + +M++ G P + T N L+ + K +
Sbjct: 183 DCNWDPVVF--DMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTD 240
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
C E+Y + + G ++ T+ IL + K G + + L + E+G +P Y +I
Sbjct: 241 RCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLI 300
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
R+G+ DDAF + + +G P+ YT L+ + GR EA M GL+
Sbjct: 301 NSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLS 360
Query: 183 PISRCFDLVTDGLKNCGK 200
P ++ + G GK
Sbjct: 361 PDIVTYNTLIHGYCKEGK 378
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ GL G + A Q+ ++M+ +G PD+ T+N+LI CK G+
Sbjct: 319 MYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGK 378
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D T +L+ K G A L+ L G + +Y+
Sbjct: 379 MQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY 438
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R + A + GH P +Y LI + EA MEM +
Sbjct: 439 LIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKE 498
Query: 181 LTP 183
+ P
Sbjct: 499 IKP 501
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + + L+ G G ++ ++ +++ MI G PD T L+E K G+
Sbjct: 354 MVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGK 413
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G Y LI A+ + A LL + +DGH P +Y
Sbjct: 414 FLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNE 473
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + +A E+ K PN Y +I R R +E + + EM G
Sbjct: 474 LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASG 533
Query: 181 LTP 183
+ P
Sbjct: 534 MLP 536
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 89/206 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+G P + +LV G GY+ A+ N+M+ +G PD +N+ I K +
Sbjct: 416 MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIAD 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
M + G DV TY + + A+ + G +EA LL N+V DG P Y
Sbjct: 476 TSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G A F+E+ KG P+ YT LI A Y +M E
Sbjct: 536 IINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKS 595
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ ++ + +GL + D A K
Sbjct: 596 VPANVITYNAIINGLCMTRRMDEAYK 621
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P V ++ V L G E A ++ M+ G PD T+ S+I K+G
Sbjct: 486 MLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGH 545
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G V TY +LI A + M+D AF ++E Y
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + D+A+ +F E++ KG PN+ YT LI G + EA EM +
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRK 665
Query: 181 LTPIS 185
+ P S
Sbjct: 666 IQPDS 670
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V+ + +++ L + L AK + M + G P + T+N+++++ CK G
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G + TY +L+ +SK G +++A L+ ++ G N Y P
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G ++G F +AF E+ + P Y TL+
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM 327
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + G + A M +M+ G PD+ T+N + +C+ G
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ ++ G D TY +I K G + +A + + ++ G P Y
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + D AF +FS++ K P N Y +I R EA Y EM E G
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ + N G + A ++
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRL 657
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P ++LV GL G LE AK ++ +M+ G + T+N LI C+ G
Sbjct: 241 MQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGL 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + +STY L+ + K + ++++ P +
Sbjct: 301 FVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNS 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G +AF F E+K + P Y TLI G A EMT+ G
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + ++ +G G +A
Sbjct: 421 LFPDIFTYTILVNGCFKLGYVSMAR 445
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G N + L+ G G A +V +M+ + + P L T+N+L+ +CK +
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQ 335
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + K D+ ++ L+ + G I EAF L L P Y
Sbjct: 336 VTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G D A E+ +G P+ YT L+ C + G A + EM G
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455
Query: 181 LTP 183
L P
Sbjct: 456 LKP 458
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 82/207 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M F P + + L+ G G + A + +++ + P + T+N+LI +C G
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D+ TY IL+ K G + A + ++ G P Y
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + AF E+ G PP+ Y + + G F EA + L M G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + +G G A ++
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREV 552
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
+KMI+ G PD++ N ++ + + +Y + + G V TY ++ + K
Sbjct: 169 DKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKE 228
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G +D+A LL + E G P Y ++ G ++G+ + A E+ G + Y
Sbjct: 229 GRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTY 288
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
LI + G FVEA + + EM P ++ + GL
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ L+ A +KM+++ ++ T+N++I +C +
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G + +Y ILI G +EA RL +++ P ++
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 121 IIKGAFRRGQFDDAFCFFSEIK 142
+K R Q C S I+
Sbjct: 676 FLKNLHRDYQVHAVQCVESLIQ 697
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+QG G L AK+++++++ G D+ F+S+I +CK G
Sbjct: 458 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 517
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ +G D Y +L+ G +++A R+ +V G P Y
Sbjct: 518 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 577
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F E+ +G P+ +Y+ +I GR V A EMTE G
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG 637
Query: 181 LTPISRCFDLVTDGL 195
+ +++V GL
Sbjct: 638 IAMDICTYNIVLRGL 652
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP V ++++ G G L + + M+ G PD TFN LI+ G
Sbjct: 353 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 412
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G DV TY+ +I A+ + G +D+A + +++ G P Y
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A SEI G + ++++I + GR ++A N +G
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + ++++ DG GK + A ++ VS
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 565
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++ L G ++ A + N+MI QG PD +N LI+ C G
Sbjct: 423 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 482
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D+ + +I + K G + +A + V G +P +Y
Sbjct: 483 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 542
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F + G PN Y TL+ + GR E + EM + G
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG 602
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + + ++ DGL G+
Sbjct: 603 IKPSTILYSIIIDGLFEAGR 622
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L+ L G ++ A+ + + M +G +PD+ ++N ++ G + ++
Sbjct: 325 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDL 384
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D T+ +LI A + GM+D+A + + + + G P Y +I R
Sbjct: 385 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 444
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DDA F+++ +G P++ Y LI G ++A + E+ G+
Sbjct: 445 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 504
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSL 214
F + + L G+ A+ I L V++
Sbjct: 505 FSSIINNLCKLGRVMDAQNIFDLTVNV 531
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + L+ G + G + A ++ +M + PD+ T + L+ ++CK G+
Sbjct: 283 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ ++ G DV +Y I++ + G + + L ++ DG P +
Sbjct: 343 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNV 402
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK G D A F+E++ G P+ Y T+I R G+ +A +M + G
Sbjct: 403 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 462
Query: 181 LTPISRCFDLVTDGL 195
+ P ++ + G
Sbjct: 463 VAPDKYAYNCLIQGF 477
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++L+ G G +E A ++ + M+ G +P++ + +L+ CK G ++
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 591
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G Y I+I + +AG A H + E G Y +++G
Sbjct: 592 LSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 651
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ FD+A F E++ N T+I + R EA + ++ L P
Sbjct: 652 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 711
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ ++ + N K L E+ E + S+++
Sbjct: 712 VVTYSIM---ITNLIKEGLVEEAEDMFSSMQN 740
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKSGEVE 62
G P V +L++ L + G A ++ M + G+ P++ +N++I+ K G+V
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+++ + + G D+ TY ++ A+ KA +D+A L +V P Y +I
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 299
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G GQ+ +A F E++ P+ + L+ + G+ EA + M G
Sbjct: 300 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 359
Query: 183 PISRCFDLVTDGLKNCG 199
P ++++ +G G
Sbjct: 360 PDVFSYNIMLNGYATKG 376
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 79/195 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V G LV G G ++ + +M+++G P ++ +I+ + ++G
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ TY I++ + K DEA L L
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ + ++A F+ I P+ Y+ +IT + G EA + M G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742
Query: 181 LTPISRCFDLVTDGL 195
P SR + V L
Sbjct: 743 CEPNSRLLNHVVREL 757
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCKLGSCADVSTYKI 85
E A ++++ G ++ N L+E C++ + ++ + + +LG DV +Y I
Sbjct: 131 ELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 190
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ ++ G +A LL + E G P++ Y +I G F+ G + A F E+
Sbjct: 191 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 250
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PP+ Y +++ + +A +L +M + P + ++ + G + G+
Sbjct: 251 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 310
Query: 204 AEKI 207
A ++
Sbjct: 311 AVRV 314
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/141 (18%), Positives = 67/141 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G + +++++GL + A + ++ ++ T N++I+ + ++
Sbjct: 633 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 692
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ S+ + V TY I+I + K G+++EA + ++ G P L
Sbjct: 693 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 752
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
+++ ++ + A + S+I
Sbjct: 753 VVRELLKKNEIVRAGAYLSKI 773
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P TF +LI+ CK+G
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 246 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTT 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 306 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
P +R + ++ + C K D+
Sbjct: 366 XKPDTRTYTMIINEF--CKKGDV 386
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 151 ITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXK 210
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G T+ LI K G +D A + ++ P Y
Sbjct: 211 MDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 270
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 271 LIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 330
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + GL G+ AEK+
Sbjct: 331 IRLDDVAYTALISGLCQEGRSVDAEKM 357
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G + ++ ++ K G
Sbjct: 96 VLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWG 155
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL + G P Y+ +I G + + D+A
Sbjct: 156 LRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEAN 215
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ + G P +TTLI + GR A +M L P ++ + GL
Sbjct: 216 ELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 275
Query: 196 KNCGKHDLAE 205
C K BL +
Sbjct: 276 --CKKGBLKQ 283
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++ + + G
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKG 295
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI K G +D AF ++++ Y +I G + G+ DA
Sbjct: 296 XKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 355
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ G P+ YT +I + G + L EM G P ++++ +G
Sbjct: 356 KMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 120 GYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEG 179
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +DEA L ++ G P + +I G
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDG 239
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + EM+ G P
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPD 299
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 300 KITYTTLIDGC--CKEGDLDTAFEH 322
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++ +M +G PD T+ +LI+ CK G+
Sbjct: 256 MLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGD 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 316 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTM 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 376 IINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 61 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECG 120
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 121 YPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGF 180
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + EA EM GL P F + DG
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGH 240
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 241 CKNGRVDLAMEI 252
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 291 MSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + +LL + DGH P Y
Sbjct: 351 SVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNV 410
Query: 121 IIKG 124
++ G
Sbjct: 411 LMNG 414
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ F+P + +++ GL + L+ A+Q++++M+ +G PDL + L+ +G
Sbjct: 228 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR 287
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G DV TY ++I + K G +D+A + LV + +P Y+
Sbjct: 288 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 347
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + D+ E+ + PN Y T+I R EA EM+E G
Sbjct: 348 LIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG 404
Query: 181 LTPISRCF 188
P +R +
Sbjct: 405 FVPDARTY 412
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G+ P + + ++ GL A L A ++ N+MI + P+L T++ +I+ +CKS +
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ Y L+ S AG +D A LL +V G P Y
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+I + G+ DDA F E+ PN Y+ LI R R E + EM
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA 369
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ F P V + L+ L G ++ A +M ++G P L +FN++I +C++ +
Sbjct: 161 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLAD 220
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E++ + ++ TY ++I + K+ +DEA +LL +V +G P Y P++
Sbjct: 221 ALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVL 280
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ D A + +G P+ YT +I + GR +A E+ +P
Sbjct: 281 GFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSP 340
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M +G R +++QGL G + A + + ++ + PD+ ++ +LI +CK G
Sbjct: 51 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 110
Query: 60 EVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
V+ +++ + G C + TY L+ + K +D A ++ + P Y
Sbjct: 111 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTY 170
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ F+ G+ D+A F+++ +G+ P + +IT R R +A EM +
Sbjct: 171 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 230
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P + +V DGL + D A+++ VS
Sbjct: 231 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + LV GL L++A+ ++ + K+ PD+ T+N+L+ + + G V+
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEA 186
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G + ++ +I + +A + +A + + +++ +P Y+ +I G
Sbjct: 187 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 246
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ Q D+A + +G P+ YT L+ GR A L M G P
Sbjct: 247 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 306
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ +V D L G+ D A +I
Sbjct: 307 VVTYTVVIDKLCKVGRVDDAHEI 329
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 78 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
A TY +LI A +D AF LL + +G + I++G R G+ A
Sbjct: 23 ASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEH 82
Query: 138 F-SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM-GLTPISRCFDLVTDGL 195
F + +++ P+ YTTLI + GR A + +M G P + ++ + DGL
Sbjct: 83 FDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGL 142
Query: 196 KNCGKHDLAEKI 207
+ D A +
Sbjct: 143 CKQDRLDAARAV 154
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ F+P + +++ GL + L+ A+Q++++M+ +G PDL + L+ +G
Sbjct: 178 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G DV TY ++I + K G +D+A + LV + +P Y+
Sbjct: 238 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 297
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R + D+ E+ + PN Y T+I R EA EM+E G
Sbjct: 298 LIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG 354
Query: 181 LTPISRCF 188
P +R +
Sbjct: 355 FVPDARTY 362
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G+ P + + ++ GL A L A ++ N+MI + P+L T++ +I+ +CKS +
Sbjct: 143 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 202
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ Y L+ S AG +D A LL +V G P Y
Sbjct: 203 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 262
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+I + G+ DDA F E+ PN Y+ LI R R E + EM
Sbjct: 263 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA 319
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ F P V + L+ L G ++ A +M ++G P L +FN++I +C++ +
Sbjct: 111 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLAD 170
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+E++ + ++ TY ++I + K+ +DEA +LL +V +G P Y P++
Sbjct: 171 ALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVL 230
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ D A + +G P+ YT +I + GR +A E+ +P
Sbjct: 231 GFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSP 290
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M +G R +++QGL G + A + + ++ + PD+ ++ +LI +CK G
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 60 EVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
V+ +++ + G C + TY L+ + K +D A ++ + P Y
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ F+ G+ D+A F+++ +G+ P + +IT R R +A EM +
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P + +V DGL + D A+++ VS
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 215
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + LV GL L++A+ ++ + K+ PD+ T+N+L+ + + G V+
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEA 136
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G + ++ +I + +A + +A + + +++ +P Y+ +I G
Sbjct: 137 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 196
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ Q D+A + +G P+ YT L+ GR A L M G P
Sbjct: 197 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 256
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ +V D L G+ D A +I
Sbjct: 257 VVTYTVVIDKLCKVGRVDDAHEI 279
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 15/190 (7%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V+ +L+ G+ G A+++ N+M K G P TFNSLI+ +CK+G++E +
Sbjct: 404 PNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLL 463
Query: 68 YYSVCKLGS--------------CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
+Y + ++G D ++ + ++ + +G+I +A+R+L L + G P
Sbjct: 464 FYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAP 522
Query: 114 FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
Y ++ G + G F+ A+ F E++ KG P+ Y TLI R R +A
Sbjct: 523 GIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVF 582
Query: 174 MEMTEMGLTP 183
+M + G TP
Sbjct: 583 DQMEKNGCTP 592
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 36/248 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P V ++++ L+ +L A + +M+K P++ TF+ LI+ +CKSG
Sbjct: 152 MRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGN 211
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
V+ + ++ + + G D TY ++I + ++ +D+A+RL + + G P
Sbjct: 212 VKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNA 271
Query: 114 --------------FPSL--------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
F L Y+ +I+G FR +++D + ++
Sbjct: 272 LLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDN 331
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ +YT ++ G+ +A L EMTE G+ P + C++++ G + G A
Sbjct: 332 VKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEAR 391
Query: 206 KIEQLEVS 213
+ QLE+S
Sbjct: 392 SL-QLEIS 398
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 1/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P +++ GL + ++ A ++ +KM G PD T N+L+ C
Sbjct: 222 MTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDR 281
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + K G DV Y LI + +A ++ L ++ED P LY
Sbjct: 282 VDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTI 341
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG G+ DA +E+ G P+ Y LI G EA + +E++
Sbjct: 342 MMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHD 401
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQLE 211
P + + ++ G+ +N D E ++E
Sbjct: 402 CFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L+ G ++ A ++ K G D+ ++ LI + ++
Sbjct: 257 MKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKR 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +Y + + DV Y I++ +++AG + +A LL+ + E G P Y
Sbjct: 317 YEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNV 376
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG G +A EI PN Y+ LI+ R G +A EM ++G
Sbjct: 377 LIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLG 436
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIE 208
P + F+ + DGL G+ H L K+E
Sbjct: 437 CYPSAVTFNSLIDGLCKTGQLEKAHLLFYKME 468
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 16/177 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDL--------------E 46
M G P + L+ GL G LE A + KM + G +P L
Sbjct: 432 MEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSA 490
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ ++E +C SG + + + G + TY IL+ K G + A++L +
Sbjct: 491 SLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREM 550
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGR 162
G +P Y +I G R + +DA+ F +++ G P+ VY T++T MC R
Sbjct: 551 QFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRR 607
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 13/220 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++++GL AG + A +++N+M + G PD +N LI+ C G
Sbjct: 327 MIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGL 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + +V TY ILI + + G+ +A + + + + G P +
Sbjct: 387 LSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNS 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP-------------NRPVYTTLITMCGRGGRFV 167
+I G + GQ + A F +++I +P + ++ G
Sbjct: 447 LIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIH 506
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+A LM++ + G P ++++ +G G + A K+
Sbjct: 507 KAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKL 546
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 20/228 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P ++L++G + G L A+ + ++ + P+++T++ LI +C++G
Sbjct: 362 MTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGL 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++ + KLG T+ LI + K G +++A L + + E G NP SL+
Sbjct: 422 TRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNP--SLFLR 478
Query: 121 IIKGAFR----------------RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
+ +G G A+ ++ G P Y L+ + G
Sbjct: 479 LSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLG 538
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLE 211
F A EM GL+P + + + +GL + + A K+ +Q+E
Sbjct: 539 NFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQME 586
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ L G + A + M PD+ T+N +++ + + + + +Y + KL
Sbjct: 131 VLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKL 190
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V+T+ ILI + K+G + +A L + + G P Y +I G R + DDA
Sbjct: 191 NCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDA 250
Query: 135 FCFFSEIKIKGHPPN 149
+ F ++K G P+
Sbjct: 251 YRLFDKMKDSGVGPD 265
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 59/123 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+ L ++G + A +++ ++ G P + T+N L+ CK G +++ + G
Sbjct: 495 MVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKG 554
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI + + ++A+++ + ++G P ++Y ++ RR + AF
Sbjct: 555 LSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAF 614
Query: 136 CFF 138
+
Sbjct: 615 SLW 617
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DL+ L+N LE Q + + G + F LI+ K G + +E + S+
Sbjct: 95 DLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRD 154
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
DV TY +++ + + + A + +++ P + ++ +I G + G D
Sbjct: 155 FDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKD 214
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A F E+ +G P+ Y +I+ R R +A +M + G+ P
Sbjct: 215 ALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGP 264
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D G P + ++LV G G A ++ +M +G PD T+ +LI + +
Sbjct: 515 LADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQR 574
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
E +++ + K G D + Y+ ++ + + + AF L
Sbjct: 575 EEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSL 616
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + GF P + + L+ G AG + A ++ +M K P+ +F LI++ CK+ +
Sbjct: 272 IKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEK 331
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G ADV TY LI K G D+A+ +L ++++ GH+P Y
Sbjct: 332 MDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLC 391
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + ++ E++ G P+ +Y T+I + + G EA EM G
Sbjct: 392 IMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGG 451
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P + L+ G + G
Sbjct: 452 LNPGLDTYILMVHGFLSQG 470
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 93/246 (37%), Gaps = 37/246 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V L+ G G + A ++++ MI++G DP ++ ++ K E
Sbjct: 342 MQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEE 401
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E C+E+ + K+G D++ Y +I V K G + EA RL + G NP Y
Sbjct: 402 LEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYIL 461
Query: 121 IIKGAFRRGQFDDAFCFFSE-------------------------------------IKI 143
++ G +G +A +F E +
Sbjct: 462 MVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTT 521
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
KG N +T I G EA +Y ++M + L P F + GLK L
Sbjct: 522 KGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQL 581
Query: 204 AEKIEQ 209
A +I +
Sbjct: 582 AVEITE 587
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 1/193 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ + ++ A +++++M K G +PD F L++ +CK+G V+ ++ + ++
Sbjct: 182 VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RV 240
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
++ + L+ + G I EA +L + E G P +Y ++ G + G+ DA
Sbjct: 241 RFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDA 300
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F +E+K PN +T LI + + EA EM G + + G
Sbjct: 301 FDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISG 360
Query: 195 LKNCGKHDLAEKI 207
G D A +I
Sbjct: 361 FCKWGNTDKAYEI 373
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G P ++ G ++ A + N M +G PD T+NSLI+ +CKSG
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + E+ + G A++ TY LI A+ K +D+A L+ + + G P +
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNI 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F ++ KG+ N Y ++ + G F EA L +M + G
Sbjct: 459 LIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ + L + +++ AEK+
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKL 545
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP ++LV L G L+ AK M+ M+K+G P++ T++SL++ C +
Sbjct: 269 MVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ ++G+ + +Y +I K M+DEA L +++ G P Y
Sbjct: 329 VNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A+ E+ G P N Y LI + +A + ++ + G
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P F+++ GL G+ A+ + Q
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQ 477
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P V L+ G G LE A + +M+ + +PD TFN L++ +CK G
Sbjct: 234 MIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGN 293
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M + K G +V TY L+ +++A +L+ + + G P Y
Sbjct: 294 LKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCT 353
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F++++ KG P++ Y +LI + GR A + EM + G
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + D L C H + + I
Sbjct: 414 QPANIFTYNCLIDAL--CKNHHVDQAI 438
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ GL +G + A ++V++M G ++ T+N LI+ +CK+
Sbjct: 374 MQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHH 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D+ T+ ILI + K G + A + +L+ G++ Y
Sbjct: 434 VDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNI 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
++ G + G FD+A S++ G P+ Y TLI +A L EM
Sbjct: 494 MVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + ++L+ + + A M+ K++K G +PD TFN+LI+ +C +G+V+
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL--------------------- 103
+ + V LG D +Y LI + K G A ++L
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217
Query: 104 ---HNLVEDGHNPFPSL-----------YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
H LV D + + + ++ +I G GQ ++AF F E+ +K P+
Sbjct: 218 LCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPD 277
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ L+ + G A N L+ M + G+ P + + DG
Sbjct: 278 YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDG 322
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G + AK ++N + + G+ P+ ++ ++I CK
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G D TY LI + K+G I A+ L+ + ++G Y
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + D A +IK +G P+ + LI + GR A + ++ G
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + ++++ +GL G D AE +
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEAL 510
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++ ++MI + PD+ TF++LI C G++E ++ + D T+ IL+
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A+ K G + A +L ++++G P Y+ ++ G Q + A + I G P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
N Y T+I + EA + +M G+ P ++ + DGL G+ A ++
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 66/162 (40%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
N + +A + ++ G PD+ TFN LI C E+ F M + K+G D
Sbjct: 80 NNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTI 139
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
T+ LI + G + EA +++ G + Y +I G + G+ A +I
Sbjct: 140 TFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI 199
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
K N +Y T+I + ++A +M ++P
Sbjct: 200 DGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISP 241
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D+G P + ++L+ GL G L++A+ + ++ +G + T+N ++ +CK G
Sbjct: 444 IKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGL 503
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+ + + G D TY+ LI A+ ++A +LL ++
Sbjct: 504 FDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P V + L+ G G ++ AK MIK G PD+ ++N L+ +C +G +E +
Sbjct: 266 FGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E + G D+ TY IL G+I A++++ ++ +G NP Y +I G
Sbjct: 326 EFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGH 385
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G +++F ++ +G + YT L++ + GR EA L EM +GL P
Sbjct: 386 CQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDL 445
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ ++ GL C + + E IE E
Sbjct: 446 LTYSVLIHGL--CKRGAVEEAIELYE 469
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + ++L G G + A ++V +M+ G +PDL T+ LI C+ G
Sbjct: 331 MENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGN 390
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G + TY +L+ ++ K+G IDEA LLH + G P Y+
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSV 450
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +RG ++A + E+ K PN V + +I+ G EA Y +T+
Sbjct: 451 LIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 510
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ ++++ DG G
Sbjct: 511 VAEEIILYNIMIDGYAKLG 529
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 37/246 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + +L+ L +G ++ A ++++M G PDL T++ LI +CK G
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460
Query: 61 VEFCVEMYYSVC-----------------------------------KLGSCADVSTYKI 85
VE +E+Y +C K ++ Y I
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I +K G I EA R ++E G +P + +I G ++G+ +A IK+ G
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 580
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P YTTL+ G + L EM + P + +V GL C + L E
Sbjct: 581 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL--CKEGRLHE 638
Query: 206 KIEQLE 211
++ L+
Sbjct: 639 SVQLLK 644
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L+ GL AG +E A + N M G +PD+ T+N L G
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D+ TY ILI + G I+E+F+L ++ G Y
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
++ + G+ D+A E+++ G P+ Y+ LI +C RG EA EM
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA-VEEAIELYEEMCSK 474
Query: 180 GLTPISRCFDLVTDGLKNCG-------------KHDLAEKI 207
+ P S + GL G K D+AE+I
Sbjct: 475 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 515
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL G + A+ + + K ++ +N +I+ K G + V Y + + G
Sbjct: 486 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 545
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ T+ LI K G + EA +LL + G P Y ++ G G F
Sbjct: 546 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E++ K P + YT ++ + GR E+ L M GL P ++ V
Sbjct: 606 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 665
Query: 196 KNCGKHDLAEKIE 208
C HDL + +
Sbjct: 666 --CKAHDLQKAFQ 676
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ G G + A + ++I++G P + TFNSLI CK G++ V++ ++
Sbjct: 519 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 578
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G TY L+ + G + F +LH + P Y ++KG + G+ +
Sbjct: 579 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 638
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+ + +G P++ Y T+I + +A +M + L P ++++ +
Sbjct: 639 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 698
Query: 194 GL 195
GL
Sbjct: 699 GL 700
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P ++V+GL G L + Q++ M +G PD T+N++I++ CK+ +
Sbjct: 611 MEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHD 670
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + TY +LI + G + +A RLL L + Y
Sbjct: 671 LQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTT 730
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIK +G +A FF ++ +G + Y+ +I + +A + M G
Sbjct: 731 IIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHG 790
Query: 181 LTP 183
+ P
Sbjct: 791 IPP 793
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L+ G G + S M+++M + P T+ +++ +CK G +
Sbjct: 580 GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHES 639
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V++ + G D TY +I + KA + +AF+L + +++ P P Y +I G
Sbjct: 640 VQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 699
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G DA ++ + + YTT+I G A + +M E G
Sbjct: 700 LCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVS 759
Query: 185 SRCFDLVTDGL 195
R + V + L
Sbjct: 760 IRDYSAVINRL 770
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 89/206 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+G P + +LV G GY+ A+ N+M+ +G PD +N+ I K +
Sbjct: 416 MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIAD 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
M + G DV TY + + A+ + G +EA LL N+V DG P Y
Sbjct: 476 TSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G A F+E+ KG P+ YT LI A Y +M E
Sbjct: 536 IINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKS 595
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
+ ++ + +GL + D A K
Sbjct: 596 VPANVITYNAIINGLCMTRRMDEAYK 621
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P V ++ V L G E A ++ M+ G PD T+ S+I K+G
Sbjct: 486 MLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGH 545
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G V TY +LI A + M+D AF ++E Y
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + D+A+ +F E++ KG PN+ YT LI G + EA EM +
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRK 665
Query: 181 LTPIS 185
+ P S
Sbjct: 666 IQPDS 670
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V+ + +++ L + L AK + M + G P + T+N+++++ CK G
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G + TY +L+ +SK G +++A L+ ++ G N Y P
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+I G ++G F +AF E+ + P Y TL+
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM 327
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P ++LV GL G LE AK ++ +M+ G + T+N LI C+ G
Sbjct: 241 MQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGL 300
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + +STY L+ + K + ++++ P +
Sbjct: 301 FVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNS 360
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G +AF F E+K + P Y TLI G A EMT+ G
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + ++ +G G +A
Sbjct: 421 LFPDIFTYTILVNGCFKLGYVSMAR 445
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G N + L+ G G A +V +M+ + + P L T+N+L+ +CK +
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQ 335
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + K D+ ++ L+ + G I EAF L L P Y
Sbjct: 336 VTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G D A E+ +G P+ YT L+ C + G A + EM G
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455
Query: 181 LTP 183
L P
Sbjct: 456 LKP 458
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 82/207 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M F P + + L+ G G + A + +++ + P + T+N+LI +C G
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D+ TY IL+ K G + A + ++ G P Y
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + AF E+ G PP+ Y + + G F EA + L M G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + + +G G A ++
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREV 552
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
+KMI+ G PD++ N ++ + + +Y + + G V TY ++ + K
Sbjct: 169 DKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKE 228
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G +D+A LL + E G P Y ++ G ++G+ + A E+ G + Y
Sbjct: 229 GRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTY 288
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
LI + G FVEA + + EM P ++ + GL
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ L+ A +KM+++ ++ T+N++I +C +
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G + +Y ILI G +EA RL +++ P ++
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 121 IIKGAFRRGQFDDAFCFFSEIK 142
+K R Q C S I+
Sbjct: 676 FLKNLHRDYQVHAVQCVESLIQ 697
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++GF P + +V G + G ++SA + +M + G P++ T+ SLI CKS ++
Sbjct: 602 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 661
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + + G DV+ Y LI K ++ A L L+E G +P +Y +I
Sbjct: 662 LALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMI 721
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + A ++ ++ P + YTTLI + GR V A++ MEM G+
Sbjct: 722 SGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIV 781
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P F ++ +GL N G+ + A KI
Sbjct: 782 PDIITFHVLVNGLCNKGQLENARKI 806
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+++ G P +L++G N+G +E A ++ +M G P + NSL+ K+
Sbjct: 391 ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPL 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ G A++ TY I++ + K G +DEA LL N+V G P Y
Sbjct: 451 WEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 509
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G D A FS++ + PN Y+ LI + G +A + +M +
Sbjct: 510 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 569
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+ + +GL G+
Sbjct: 570 IAPTDFTFNTIINGLCKVGQ 589
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 6/218 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V + ++ G G ++ A + + M+ + P++ T++ LI+ K G+
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 554
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++++ + L T+ +I + K G + EA L N +E+G P Y
Sbjct: 555 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNS 614
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G D A + E+ G PN YT+LI + R A EM E G
Sbjct: 615 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 674
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK----IEQLEVSL 214
L + + DG C + D+ E LEV L
Sbjct: 675 LELDVTAYSALIDGF--CKRRDMESAQDLFFELLEVGL 710
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + ++ G + +E+A KMI DL T+ +LI+ + K G + F
Sbjct: 709 GLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 768
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + G D+ T+ +L+ + G ++ A ++L + P +Y +I G
Sbjct: 769 SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 828
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
FR G +AF E+ +G P+ Y LI +G R
Sbjct: 829 YFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG V L+ G +ESA+ + ++++ G P+ +NS+I
Sbjct: 670 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 729
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + Y + D+ TY LI + K G + A L ++ G P +
Sbjct: 730 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 789
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +GQ ++A E+ K P+ +Y TLI R G EA EM + G
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849
Query: 181 LTPISRCFDLVTDG 194
L P +D++ +G
Sbjct: 850 LVPDDVTYDILING 863
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L++G L A E A ++ ++ + G ++ T+N ++ +CK G+
Sbjct: 426 MKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGK 484
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ G +V +Y +I + G +D A + +++ P Y+
Sbjct: 485 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 544
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F++G + A F ++ P + T+I + G+ EA + L E G
Sbjct: 545 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + DG G D A
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSA 628
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ L+ + + + NKM+ +G D T + ++ K G VE E
Sbjct: 223 PWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEY 282
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D Y I+I AV K + LL + E G P + + +I
Sbjct: 283 FRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA 342
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G +A E+ G P N V T+L+ G A N ++TE GL P
Sbjct: 343 QGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVT 402
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ ++ +G N G + A ++
Sbjct: 403 YSVLIEGCCNSGNIEKASEL 422
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++V+ L G +E A++ + ++G D ++ +I+ +CK +E+ + +
Sbjct: 265 VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKER 324
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +T+ +I A G + EA RL ++ G + ++KG +G D A
Sbjct: 325 GWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSA 384
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F++I G PN+ Y+ LI C G +A+ +M G+ P
Sbjct: 385 LNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 433
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 84/193 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ L G ++ A +++ M+ QG P++ ++N +I C+ G ++ ++ +
Sbjct: 473 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 532
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+V TY ILI K G ++A L ++ P + II G + GQ +
Sbjct: 533 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 592
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A +G P+ Y +++ + G A EM E G++P + + +
Sbjct: 593 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 652
Query: 194 GLKNCGKHDLAEK 206
G + DLA K
Sbjct: 653 GFCKSNRIDLALK 665
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
R + L+ + A +E+A N MI Q P + N L+ + + + ++Y
Sbjct: 191 RVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNK 250
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ G D T +++ A K G ++EA E G Y+ II+ ++
Sbjct: 251 MVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPN 310
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ E+K +G P+ +T++I C G VEA EM G
Sbjct: 311 SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG 360
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 89/207 (42%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ P ++ + G + A ++ +MI G +L SL++ C G
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G + TY +LI +G I++A L + +G P
Sbjct: 381 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + +++A F E + N Y +++ +GG+ EA + L M G
Sbjct: 441 LLRGYLKAPLWEEASKLFDE-AVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 499
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G G D+A +
Sbjct: 500 MVPNVVSYNDMILGHCRKGNMDMASSV 526
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
+++ +M ++G P TF S+I G + + + + G ++ L+
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 375
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
G +D A L + + EDG P Y+ +I+G G + A ++++K+ G PP+
Sbjct: 376 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 435
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+L+ + + EA+ E + G+ I ++++ L GK D A
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF-TYNIMMSWLCKGGKMDEA 488
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 7/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG + V + L+ G G L+ A ++N M+ + +PD+ T+ L++ +CK G+
Sbjct: 224 MTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGK 283
Query: 61 VEFCVEMYYSVCKL-------GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V+ V L G ADV TY LI + K G +D A L + + + G P
Sbjct: 284 VKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRP 343
Query: 114 FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+ ++ G ++ G+ DA F ++ KG+ N Y +I + G EA L
Sbjct: 344 NMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 403
Query: 174 MEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+M + G P + F+ + L ++D AEK+
Sbjct: 404 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 437
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQ-------MVNKMIKQGSDPDLETFNSLIE 53
M K NP V +LV L G ++ AK+ ++++M +G D+ T++SLI+
Sbjct: 259 MVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLID 318
Query: 54 TICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
+CK+G ++ + ++ + G ++ T+ IL+ + K G + +A + +L+ G++
Sbjct: 319 GLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHL 378
Query: 114 FPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
Y +I G ++G ++A S+++ G PN + T+I + +A L
Sbjct: 379 NVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLL 438
Query: 174 MEMTEMGL 181
+M GL
Sbjct: 439 RQMIARGL 446
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++L+ + G + ++ K++K+G P T N+LI+ +C G+V+
Sbjct: 87 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 146
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G + Y LI V K G A +LL + P +Y+ II
Sbjct: 147 ALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIID 206
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +A+ FSE+ +KG + Y TLI G+ EA L M + P
Sbjct: 207 ALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINP 266
Query: 184 ISRCFDLVTDGLKNCGKHDLAEK 206
+ ++ D L GK A++
Sbjct: 267 DVYTYTILVDALCKEGKVKEAKR 289
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 42/248 (16%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P + L++GL G ++ A +K++ QG + + +LI +CK G+
Sbjct: 122 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRA 181
Query: 64 CVE---------------MYYSV----CKL----------------GSCADVSTYKILIP 88
++ MY ++ CK G ADV TY LI
Sbjct: 182 AIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIY 241
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA-------FCFFSEI 141
G + EA LL+ +V NP Y ++ + G+ +A + E+
Sbjct: 242 GFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEM 301
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ +G P + Y++LI + G A +M + G+ P F ++ DGL G+
Sbjct: 302 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRL 361
Query: 202 DLAEKIEQ 209
A+++ Q
Sbjct: 362 KDAQEVFQ 369
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 2/185 (1%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S + +++ +G PDL T N LI C G++ F + + K G T LI
Sbjct: 76 STVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 135
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+ G + +A L+ G Y +I G + G A +I +
Sbjct: 136 KGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTK 195
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P+ +Y+T+I + EA EMT G++ ++ + G GK L E I
Sbjct: 196 PDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGK--LKEAI 253
Query: 208 EQLEV 212
L V
Sbjct: 254 GLLNV 258
>gi|115445813|ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa Japonica Group]
Length = 542
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P V + LV L AG A + ++M+ G P+ + N LI+ + E +
Sbjct: 91 DGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFD 150
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E+ + K G DV TY LI + +AG I EA+ +L ++E P Y PI+
Sbjct: 151 LAWELIH---KSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIV 207
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ R G+ +A +E++ G PN Y LI +F E LME +
Sbjct: 208 QAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWK 267
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P + +++ +GL C K E +E L+V L
Sbjct: 268 PSTVTYNIYMNGL--CKKGKAKEALELLDVML 297
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V + ++ L G +++ MIK+G +P+ TFN LI ++C G+ + +
Sbjct: 340 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIH 399
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
S LG A+V TY IL+ G + EA RL+ + E P Y II G R
Sbjct: 400 S---LGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 456
Query: 130 QFDDAF-CFFSEI 141
+FD A CF +
Sbjct: 457 KFDAATACFLKSL 469
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V L+ GL AG + A +++ M+++ P ++T+ +++ C+ G +
Sbjct: 160 GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 219
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + +LG +V TY +LI A+ DE ++L P Y + G
Sbjct: 220 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 279
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++G+ +A + +G P ++ L+ R ++A L TE+
Sbjct: 280 LCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 339
Query: 185 SRCFDLVTDGLKNCGK 200
++ V L GK
Sbjct: 340 VVAYNTVMSSLCEMGK 355
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P V+ +VQ G + AK ++ +M + G P++ T+N LI +C +
Sbjct: 191 MLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDK 250
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ TY I + + K G EA LL ++ +G P ++
Sbjct: 251 FDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSI 310
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + DA Y T+++ G++ L +M + G
Sbjct: 311 LLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKG 370
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P +R F+++ L GK LA+ +
Sbjct: 371 IEPNTRTFNILIRSLCVGGKSSLAKSL 397
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 77/182 (42%), Gaps = 3/182 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ L ++ L A ++ + + + +N+++ ++C+ G+
Sbjct: 296 MLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGK 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + K G + T+ ILI ++ G A L+H+L G Y
Sbjct: 356 WRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHSL---GFAANVVTYNI 412
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A S ++ K P+ YT +I R +F A ++ G
Sbjct: 413 LLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLTSG 472
Query: 181 LT 182
L+
Sbjct: 473 LS 474
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V + L+ GL N G + A + ++M+ P++ T N+L+ CK+
Sbjct: 262 MNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKM 321
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E++ + K G +V+TY ILI A K +++AF L ++ G P S Y
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G + A SE+ K + Y LI G +A L EM G
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441
Query: 181 LTPISRCFDLVTDG 194
L P ++ + DG
Sbjct: 442 LKPSQLTYNTMIDG 455
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++L+ +E A + M+ +G PD+ T+N LI +C+ G+
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + AD+ TY ILI ++ G + +A RLL + G P Y
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A S+++ G N Y LI + + +A L EM E G
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511
Query: 181 LTPISRCFDLVTD 193
L P +++VT+
Sbjct: 512 LIPNRMTYEIVTE 524
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
SD G V + L+ GL+ G + + + +MI++ +P L +FN +I +CK G++
Sbjct: 120 SDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKL 179
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR---LLHNLVEDGHNPFPSLY 118
++ + G A+V TY LI K G I + ++ +L + DG P +
Sbjct: 180 NKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTF 239
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + A F+E+ +G PN Y +LI G+ EA +M
Sbjct: 240 NILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVN 299
Query: 179 MGLTP 183
L P
Sbjct: 300 SCLKP 304
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 64/116 (55%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ L N G ++ A +++++M ++G P T+N++I+ CK G + + + + K
Sbjct: 415 NILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK 474
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+G A+V+TY +LI K +++A LL+ ++E G P Y + + +G
Sbjct: 475 VGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 9/200 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + ++++ GL G L A ++ M +G ++ T+N+LI+ CK G+
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213
Query: 61 VEFCVEMYYSVCKL------GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+ +MY + L G C + T+ ILI K + A ++ + G P
Sbjct: 214 IG---KMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y +I G G+ ++A ++ PN + L+ + +A
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330
Query: 175 EMTEMGLTPISRCFDLVTDG 194
+M + G+TP ++++ D
Sbjct: 331 DMPKQGITPNVTTYNILIDA 350
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 5/206 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQG---LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICK 57
M +G + V + L+ G + G + A ++ +M G P+ TFN LI+ CK
Sbjct: 189 MKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCK 248
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
V ++++ + + G +V TY LI + G ++EA L +V P
Sbjct: 249 DKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIIT 308
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+ ++ G + A F ++ +G PN Y LI + +A M
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML 368
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDL 203
G+ P ++ + GL C K DL
Sbjct: 369 GKGVCPDVSTYNCLIAGL--CRKGDL 392
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Query: 51 LIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
L+ K+ E + G V++ L+ + K G I + + ++
Sbjct: 99 LVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR 158
Query: 111 HNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT---MCGRGGRFV 167
P + +I G + G+ + A ++K++G N Y TLI G+ G+
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGL 195
+A L EM G+ P F+++ DG
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGF 246
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ G G L +A + ++M K G ++ T+N LI+ CK +
Sbjct: 437 MCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDK 496
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMI 96
+E + + + G + TY+I+ + + G +
Sbjct: 497 LEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532
>gi|222622724|gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
Length = 538
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P V + LV L AG A + ++M+ G P+ + N LI+ + E +
Sbjct: 87 DGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFD 146
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E+ + K G DV TY LI + +AG I EA+ +L ++E P Y PI+
Sbjct: 147 LAWELIH---KSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIV 203
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ R G+ +A +E++ G PN Y LI +F E LME +
Sbjct: 204 QAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWK 263
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P + +++ +GL C K E +E L+V L
Sbjct: 264 PSTVTYNIYMNGL--CKKGKAKEALELLDVML 293
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V + ++ L G +++ MIK+G +P+ TFN LI ++C G+ + +
Sbjct: 336 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIH 395
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
S LG A+V TY IL+ G + EA RL+ + E P Y II G R
Sbjct: 396 S---LGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 452
Query: 130 QFDDAF-CFFSEI 141
+FD A CF +
Sbjct: 453 KFDAATACFLKSL 465
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V L+ GL AG + A +++ M+++ P ++T+ +++ C+ G +
Sbjct: 156 GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 215
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + +LG +V TY +LI A+ DE ++L P Y + G
Sbjct: 216 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 275
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++G+ +A + +G P ++ L+ R ++A L TE+
Sbjct: 276 LCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 335
Query: 185 SRCFDLVTDGLKNCGK 200
++ V L GK
Sbjct: 336 VVAYNTVMSSLCEMGK 351
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P V+ +VQ G + AK ++ +M + G P++ T+N LI +C +
Sbjct: 187 MLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDK 246
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ TY I + + K G EA LL ++ +G P ++
Sbjct: 247 FDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSI 306
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + DA Y T+++ G++ L +M + G
Sbjct: 307 LLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKG 366
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P +R F+++ L GK LA+ +
Sbjct: 367 IEPNTRTFNILIRSLCVGGKSSLAKSL 393
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 77/182 (42%), Gaps = 3/182 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ L ++ L A ++ + + + +N+++ ++C+ G+
Sbjct: 292 MLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGK 351
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + K G + T+ ILI ++ G A L+H+L G Y
Sbjct: 352 WRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHSL---GFAANVVTYNI 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A S ++ K P+ YT +I R +F A ++ G
Sbjct: 409 LLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLTSG 468
Query: 181 LT 182
L+
Sbjct: 469 LS 470
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL +G L AK++ +++ G PD T+ +I+ K+ +
Sbjct: 466 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASK 525
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V+++Y + + DV LI + KAG DEA+R+ + L E P Y
Sbjct: 526 FDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNT 585
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + E+ +PPN Y T++ + G +A + L MT G
Sbjct: 586 LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 645
Query: 181 LTPISRCFDLVTDGL 195
P ++ V GL
Sbjct: 646 CIPDLSSYNTVIYGL 660
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V +L+Q L +AG + AK + KM K PD T+ +L++ +G+
Sbjct: 291 MENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E++ ++ G +V Y +I A+ + G + EA + + + G P Y
Sbjct: 351 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 410
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F DA F + I G PN + I G+ G ++A M G
Sbjct: 411 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 470
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + V GL G+ +A+++
Sbjct: 471 IVPDVVAGNAVLFGLAKSGRLGMAKRV 497
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 90/178 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL++ ++ A+ + +M + G PD T+N L++ + KS +E +++ + + G
Sbjct: 796 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 855
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY +I + K+ +++A L +NL+ G +P P Y P++ G + G+ +DA
Sbjct: 856 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 915
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F+E+ G N +Y L+ G + + +M + G+ P + + ++ D
Sbjct: 916 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A Q M +G PD+ N+++ + KSG + +++ + +G D TY ++I
Sbjct: 459 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 518
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
SKA DEA ++ ++++E+ P +I ++ G+ D+A+ F ++K P
Sbjct: 519 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 578
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL-KNCGKHD 202
Y TL+ GR G+ E + L EM P ++ + D L KN +D
Sbjct: 579 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVND 633
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ L A + A +++ KM +G PD+ T LI+ +C +G
Sbjct: 256 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + K D TY L+ G + + + DG+N Y
Sbjct: 316 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A F E+K KG P + Y +LI+ + RF +A M G
Sbjct: 376 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 435
Query: 181 LTP 183
P
Sbjct: 436 PKP 438
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ G L A A ++ M G P+ T I KSGE
Sbjct: 396 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 455
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ Y + G DV ++ ++K+G + A R+ H L G +P Y
Sbjct: 456 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 515
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + +FD+A F ++ P+ +LI + GR EA ++ EM
Sbjct: 516 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 575
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ + GL GK
Sbjct: 576 LEPTDGTYNTLLAGLGREGK 595
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+N V ++ L G + A +M ++M ++G P+ ++NSLI K+
Sbjct: 361 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ + G + T+ + I K+G +A + + G P
Sbjct: 421 FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ A F E+K G P+ YT +I C + +F EA +M E
Sbjct: 481 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 540
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + D L G+ D A +I
Sbjct: 541 CVPDVLAVNSLIDTLYKAGRGDEAWRI 567
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 76/175 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++++ A + A ++ MI+ PD+ NSLI+T+ K+G +
Sbjct: 505 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 564
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + ++ TY L+ + + G + E LL + + P Y I+
Sbjct: 565 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 624
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+ G +DA + KG P+ Y T+I + R+ EA + +M ++
Sbjct: 625 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 679
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV L+ +G+ A ++ M+ G P + T++ L+ K +VE + + + G
Sbjct: 201 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 260
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y I I + +A DEA+R+L + +G P + +I+ G+ DA
Sbjct: 261 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 320
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++K P+R Y TL+ G G M G + V D L
Sbjct: 321 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 380
Query: 196 KNCGK 200
G+
Sbjct: 381 CQVGR 385
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +LL+ + + +E ++ +M ++G + T+N++I + KS
Sbjct: 816 MKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR 875
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++YY++ G TY L+ + KAG I++A L + ++E G ++Y
Sbjct: 876 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 935
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
++ G G + F ++ +G P+ YT +I
Sbjct: 936 LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 72/171 (42%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++V K G +NSLI + ++ ++ + +LG D TY +L+
Sbjct: 774 AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 833
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A+ K+ I+E ++ + G+ Y II G + + + A + + +G P
Sbjct: 834 AMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 893
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
Y L+ + GR +A N EM E G ++++ +G + G
Sbjct: 894 TPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 944
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
GL G L SA + M + G + T+N L+ + KSG +E+Y + G
Sbjct: 169 GLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP 228
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
V TY +L+ A K ++ LL + G P Y I+ + +FD+A+
Sbjct: 229 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 288
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++++ +G P+ +T LI + GR +A + +M + P
Sbjct: 289 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 333
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 2/203 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G+L +E + + + G D LI+ +CK + E+ G
Sbjct: 726 LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 785
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
Y LI + +ID A L + E G P Y ++ + + ++
Sbjct: 786 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 845
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG+ Y T+I+ + R +A + + G +P + + DGL
Sbjct: 846 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 905
Query: 196 KNCGKHDLAEKI--EQLEVSLRS 216
G+ + AE + E LE ++
Sbjct: 906 LKAGRIEDAENLFNEMLEYGCKA 928
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 1/181 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ + G ++ A ++ Q GS D + +SL+E I K +E +E +
Sbjct: 690 ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 749
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D LI + K EA L+ G + LY +I G D A
Sbjct: 750 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 809
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F+E+K G P+ Y L+ G+ R E EM G ++ + G
Sbjct: 810 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 869
Query: 195 L 195
L
Sbjct: 870 L 870
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + + L+ GL G L+ A++++N+MI G PD TF +L++ CK G+
Sbjct: 357 MKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGD 416
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + + G D + LI + + G + +A R+L +++ GH P Y
Sbjct: 417 MDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTM 476
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G E++ G P Y L+ + G+ A L M M
Sbjct: 477 VIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNME 536
Query: 181 LTPISRCFDLVTDG 194
+ P F+++ DG
Sbjct: 537 VVPNDITFNILLDG 550
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G+ P V ++L+ G G + +A+ + +++ ++G P + +FN+LI C+S VE
Sbjct: 219 DYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE 278
Query: 63 --FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
F ++ ++ DV TY LI + K ++EA L + E G P +
Sbjct: 279 EGFVLKSVMESERIS--PDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTT 336
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A F +K +G P+ Y LI R G EA L EM G
Sbjct: 337 LIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
P F + DG G D A +I+
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIK 424
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S +G P V + L+ G + +E + + M + PD+ T+++LI +CK
Sbjct: 252 ISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESR 311
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ +C++G + T+ LI K G ID A R + + G P Y
Sbjct: 312 VEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNA 371
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G +A +E+ G P++ +TTL+ C + G A M E G
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ F + GL G+ AE++
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERM 458
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P V L+ GL +E A + ++M + G P+ TF +LI+ CK G+
Sbjct: 287 MESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGK 346
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D+ TY LI + + G + EA +LL+ ++ +G P +
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTT 406
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G D A + +G + +T LI+ R GR +A L +M G
Sbjct: 407 LMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAG 466
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
P + +V D C K D+
Sbjct: 467 HKPDDPTYTMVIDCF--CKKGDV 487
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P L+ G G ++ A + M +G PDL T+N+LI +C+ G+
Sbjct: 322 MCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD 381
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D T+ L+ K G +D A + +VE+G +
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ DA ++ GH P+ P YT +I + G A L EM G
Sbjct: 442 LISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG 501
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++ + +G G+
Sbjct: 502 RVPGVVTYNALMNGFCKQGQ 521
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G + A++M+ M+ G PD T+ +I+ CK G+V+ ++ + + G
Sbjct: 442 LISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG 501
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY L+ K G + A LLH ++ P + ++ G + G D
Sbjct: 502 RVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFK 561
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT 158
F E KG + YT L+
Sbjct: 562 IFNGE---KGLVSDYASYTALVN 581
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLE-SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
F+ PV G D L++ ++ + +++ G P++ FN L+ CK G+V
Sbjct: 185 NFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMN 244
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G V ++ LI ++ ++E F L + + +P Y+ +I
Sbjct: 245 ARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALIN 304
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + ++A F E+ G PN +TTLI + G+ A M + G+ P
Sbjct: 305 GLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRP 364
Query: 184 ISRCFDLVTDGLKNCGKHDLAE 205
++ + +GL C DL E
Sbjct: 365 DLITYNALINGL--CRDGDLKE 384
>gi|199601721|dbj|BAG70980.1| pentatricopeptide (PPR) repeat-containing protein [Musa balbisiana]
Length = 788
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G VR D + + +L +G + A+++ N MI +G P L T+N+L+ C S ++E
Sbjct: 243 GVTRTVRSYDAVFKAILRSGRVAMARRLFNAMIAEGVLPVLSTYNTLLWGFCLSIKMETA 302
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G D+ TY ++ ++A +D+A ++ + G P Y +IKG
Sbjct: 303 QRFFADMKERGIAPDLVTYNTILNGWARAKKMDDAEKVFAEMTAAGFAPNSISYNIMIKG 362
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTP 183
G+ DD FSE+ KG + + L+ +C GR EA L EM ++ LTP
Sbjct: 363 YVCSGRVDDGLRMFSEMGEKGLRFSEKTFAALMPGLCDDVGRAAEARKALNEMAKLQLTP 422
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + F SLIE + + V+++ + +LG V +Y + A+ ++G + A RL
Sbjct: 211 PSEDMFASLIEGYGCARIPQEAVKIFRRLPELGVTRTVRSYDAVFKAILRSGRVAMARRL 270
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ ++ +G P S Y ++ G + + A FF+++K +G P+ Y T++ R
Sbjct: 271 FNAMIAEGVLPVLSTYNTLLWGFCLSIKMETAQRFFADMKERGIAPDLVTYNTILNGWAR 330
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+ +A EMT G P S ++++ G G+ D
Sbjct: 331 AKKMDDAEKVFAEMTAAGFAPNSISYNIMIKGYVCSGRVD 370
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++G A + A ++ ++ + G + +++++ + I +SG V ++ ++ G
Sbjct: 219 LIEGYGCARIPQEAVKIFRRLPELGVTRTVRSYDAVFKAILRSGRVAMARRLFNAMIAEG 278
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+STY L+ + ++ A R ++ E G P Y I+ G R + DDA
Sbjct: 279 VLPVLSTYNTLLWGFCLSIKMETAQRFFADMKERGIAPDLVTYNTILNGWARAKKMDDAE 338
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G PN Y +I GR + EM E GL + F + GL
Sbjct: 339 KVFAEMTAAGFAPNSISYNIMIKGYVCSGRVDDGLRMFSEMGEKGLRFSEKTFAALMPGL 398
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLN-AGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKS 58
M +KG + L+ GL + G A++ +N+M K Q + D F L+ ++C+S
Sbjct: 379 MGEKGLRFSEKTFAALMPGLCDDVGRAAEARKALNEMAKLQLTPSDKSIFLRLVTSLCES 438
Query: 59 GEVEFCVEMYYSVCKLGS-CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG--HNPF- 114
G++E +E++ + D Y +L+ ++ K + A LL L+E G +P
Sbjct: 439 GDLEGALEVHRKTSQFNHVVVDPMQYGVLLESLCKGEKHESAIALLDELLEKGTMQSPQY 498
Query: 115 ----PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
PS Y P+I+ G A FF ++ KG ++ + +LI + G A+
Sbjct: 499 PTLEPSAYNPMIEYLCDHGDTKKAEAFFRQLMKKG-VDDKVAFNSLIRGHAKEGMPEAAS 557
Query: 171 NYLMEMTEMGL 181
L MT G+
Sbjct: 558 EILTIMTRHGV 568
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 8/179 (4%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+NP +++ L + G + A+ +++K+G D D FNSLI K G E
Sbjct: 505 AYNP-------MIEYLCDHGDTKKAEAFFRQLMKKGVD-DKVAFNSLIRGHAKEGMPEAA 556
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+ + + G D +Y +L+ + K +A L +++E GH P SL+ ++
Sbjct: 557 SEILTIMTRHGVPTDADSYVLLVESFLKKSEPADARTALDSMMEQGHLPSASLFRSVMVA 616
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F G+ A + KG N + ++ G EA + M TP
Sbjct: 617 LFDDGRVQTASRVMKSMIEKGVKENMDMVHKILDALFMRGHVEEALGRINLMIMNDCTP 675
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P V L+ G ++ A + +M ++ PD +T+N+L+ +C G
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +++ + G D+ TY IL+ ++ K ++EA LL + NP +Y
Sbjct: 387 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNI 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G R G+ + A FS + KG P+ Y +I + G EA MEM
Sbjct: 447 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 506
Query: 181 LTPISRCFDLVTDGL 195
+P ++ + G
Sbjct: 507 CSPDGCTYNTIARGF 521
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +V L G + A ++V+ MI++G +PD+ T+ +L++ C E++ V++
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G DV +Y LI K ID+A L + P Y ++ G
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DA F E+ +G P+ Y+ L+ + EA L + L P +
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++++ DG+ G+ + A +
Sbjct: 444 YNIIIDGMCRAGELEAARDL 463
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + LV L N + ++N+M+ PD+ F+++++ +CK G+
Sbjct: 222 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 281
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+ + + G DV TY L+ +DEA ++ +V G P Y
Sbjct: 282 VTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 341
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F E+ K P+ Y TL+ GR +A EM G
Sbjct: 342 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQLEVS 213
P + ++ D L KNC + ++ +E S
Sbjct: 402 QMPDLVTYSILLDSLCKNCHLEEAMALLKAIEAS 435
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K + P + + L+ GL + G L+ A + ++M+ +G PDL T++ L++++CK+
Sbjct: 362 MCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCH 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + ++ D+ Y I+I + +AG ++ A L NL G +P Y
Sbjct: 422 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 481
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +RG ++A F E+ P+ Y T+ + + A L EM G
Sbjct: 482 MIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 541
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ L+ + L + G
Sbjct: 542 FSADVSTTTLLVEMLSDDG 560
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G ++ A ++ + M+++G PD+ ++ +LI CK +
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ +C+ D TY L+ + G + +A L H +V G P Y+
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 411
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + ++A I+ P+ VY +I R G A + ++ G
Sbjct: 412 LLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 471
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++++ GL G + A K+
Sbjct: 472 LHPSVWTYNIMIHGLCKRGLLNEANKL 498
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L+ + + A ++ K++K G PD TF +LI +C G+
Sbjct: 82 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K G A RLL ++ + P +Y
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 201
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + Q +AF FS++ +G P+ YT+L+ + L +M
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F V D L GK A +I
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEI 288
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+GF P V L+ GL G +A +++ M + PD+ + S+I+++CK +
Sbjct: 152 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 211
Query: 61 VEFCVEMYYSVCKLGSCADVSTY--------------------------KIL-------- 86
V ++ + G D+ TY KIL
Sbjct: 212 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 271
Query: 87 -IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+ A+ K G + EA ++ +++ G P Y ++ G + + D+A F + KG
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
P+ YTTLI + + +A EM P ++ ++ + GL + G+
Sbjct: 332 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR 386
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ + + + + +M G P++ T N LI + C V F + + KLG
Sbjct: 62 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 121
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ LI + G I EA L ++++G P Y +I G + G A
Sbjct: 122 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 181
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ P+ +YT++I + + EA N +M G++P
Sbjct: 182 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 229
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
L+ L+ A N+++ P + F L+ +I K + + + G +V
Sbjct: 32 LHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNV 91
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T ILI + + AF +L +++ GH P P+ + +I+G G+ +A F +
Sbjct: 92 YTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDK 151
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + G A L M + P + + D L
Sbjct: 152 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 206
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG +P V ++++ GL G L A ++ +M PD T+N++ ++ E
Sbjct: 467 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 526
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA-FRLLHNLVEDGHNPFPSLYA 119
+++ + G ADVST +L+ +S G+ + F +L L ED F ++
Sbjct: 527 TLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDDRRYF--IFI 584
Query: 120 P----IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
P ++ F R + + E+ G +RP+
Sbjct: 585 PEGFDLLGWEFMRCKLKE-LAKIGEVSKSGTKASRPL 620
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +L++ L AG +E Q+ +M+ D+ T N++++ + K+G
Sbjct: 263 MKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGR 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E++ + G AD TY ILI + +AG +D A LL + E+G P Y
Sbjct: 323 VEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNT 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + A F E+K +G PN Y++LI G+ GR A + EM G
Sbjct: 383 LISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEG 442
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++L+ D L G+ A
Sbjct: 443 CPPNHVTYNLLIDCLIRAGRFGAA 466
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L AG +E+A ++ M +G + D T+N LI + ++G+++ + + + G +
Sbjct: 317 LSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPN 376
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
+ TY LI + K + A RL + E G P Y+ +I+G + G+ D A F
Sbjct: 377 IITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFR 436
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
E+K +G PPN Y LI R GRF A YL EM + G
Sbjct: 437 EMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAG 477
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
A +E A Q + K+G P T++S+I+ K G+V+ + MY + K D +T
Sbjct: 43 ANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTT 102
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ ILI +++KA ++EA + ++ + +P Y +I+ G+ D F +
Sbjct: 103 FNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMT 162
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G PN Y +++ G GR EA + +M + GL P + ++++ D G+ +
Sbjct: 163 AQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLE 222
Query: 203 LA 204
A
Sbjct: 223 RA 224
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+ +G P ++Q + G +++ M +M+K PD TFN LI+++ K+ +V
Sbjct: 57 TKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQV 116
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E ++ + KL DV TY ILI ++ G ID +L ++ G P Y +
Sbjct: 117 EEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSV 176
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
+ G+ D+A F ++ KG P+ Y LI G+ G+ A +++
Sbjct: 177 MHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFV 228
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G ++ ++ +M +G + T+ LIE + +G VE ++Y +
Sbjct: 243 LLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDND 302
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ T ++ +SKAG ++ AF L ++ G N Y +I G R G+ D A
Sbjct: 303 IKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAG 362
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E++ G PN Y TLI+ G+ A +EM E G+ P + + +G
Sbjct: 363 ALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGF 422
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 423 GKAGRTDAA 431
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG N ++L+ GL AG L++A ++ +M + G P++ T+N+LI + K
Sbjct: 333 MKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSN 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G +V +Y LI KAG D A L + +G P Y
Sbjct: 393 LSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNL 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I R G+F A + E++ G
Sbjct: 453 LIDCLIRAGRFGAAMEYLREMRDAG 477
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D++V L AG L+ A +++ +++++G + FNSLI ++G + E Y + +
Sbjct: 426 DVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR 485
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ST L+ + + G + EA LL+ ++E G Y ++ G F+ +
Sbjct: 486 CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEG 545
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + E+K +G P+ +T LI + G EA +EM+ +G P + ++ +
Sbjct: 546 AQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIR 605
Query: 194 GLKNCGKHDLAEKIEQ 209
GL +CG+ A K+E+
Sbjct: 606 GLCDCGRVTEALKLEK 621
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++LV G G +E + +++ +I G D ++ ++ ++C +G
Sbjct: 378 MRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGR 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G V + LI A S+AG+ D+AF +V G P S
Sbjct: 438 LDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNS 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF----VEAANYLM-E 175
++ G R+G +A + KG P N+ YT L+ G F +E A +L E
Sbjct: 498 LLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLD-----GYFKMNNLEGAQFLWKE 552
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M E G+ P + F + DGL G + A ++
Sbjct: 553 MKERGIYPDAVAFTALIDGLSKAGNVEEAYEV 584
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KG V + L+ AG + A + M++ G P T NSL+ +C+ G ++
Sbjct: 450 EKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQ 509
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ Y + + G + Y +L+ K ++ A L + E G P + +I
Sbjct: 510 EARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALI 569
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G ++A+ F E+ G PN Y +LI GR EA EM + GL
Sbjct: 570 DGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLL 629
Query: 183 PISRCFDLVTDGLKNCGKHDLA 204
+ F+++ DG G+ A
Sbjct: 630 SDTFTFNIIIDGFCRRGQMKFA 651
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS GF P + L++GL + G + A ++ +M ++G D TFN +I+ C+ G+
Sbjct: 588 MSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQ 647
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++F +E + + ++G D+ T+ ILI KA + A +++ + G +P + Y
Sbjct: 648 MKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNT 707
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
+ G R + + A ++ G P+ Y T+++
Sbjct: 708 YMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLS 745
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++ G + + +++ M K PD+ TFN LI C G
Sbjct: 241 KGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWV 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + + G V+T+ ++ A+ + G + EA +L + + G P ++Y ++
Sbjct: 301 AIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMD 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G F+ + A + E++ G P+ + L+ + GR ++ L ++ GL
Sbjct: 361 GYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFL 420
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQ 209
S +D++ L G+ D A K+ Q
Sbjct: 421 DSSLYDVMVSSLCWAGRLDEAMKLLQ 446
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V ++L+ G A ++ M++ G +P + TF +++ +C+ G V +
Sbjct: 279 SPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARK 338
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + +G + + Y L+ KA + +A L + G +P + ++ G +
Sbjct: 339 LFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHY 398
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ +D+ ++ + G + +Y +++ GR EA L E+ E GLT
Sbjct: 399 KYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVV 458
Query: 187 CFDLVTDGLKNCGKHDLA 204
F+ + G D A
Sbjct: 459 AFNSLIGAYSRAGLEDKA 476
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
S ++ MI +G P TFN++I C+ V + + + K DV T+ ILI
Sbjct: 230 SVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILI 289
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
A G A LH +V G P + + I+ R G +A F I+ G
Sbjct: 290 NACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIA 349
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
PN +Y TL+ + +A+ EM G++P F+++ G G+ + ++++
Sbjct: 350 PNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRL 409
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + L+ GL G+L+ A+ ++ +M+++G + + L++ K +E
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGA 546
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + + G D + LI +SKAG ++EA+ + + G P Y +I+G
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRG 606
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ +A E++ KG + + +I R G+ A ++M +GL P
Sbjct: 607 LCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPD 666
Query: 185 SRCFDLVTDG 194
F+++ G
Sbjct: 667 IFTFNILIGG 676
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF +L+ G LE A+ + +M ++G PD F +LI+ + K+G
Sbjct: 518 MLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGN 577
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E++ + +G + Y LI + G + EA +L + + G +
Sbjct: 578 VEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNI 637
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G RRGQ A F +++ G P+ + LI + V A + +M G
Sbjct: 638 IIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCG 697
Query: 181 LTP 183
L P
Sbjct: 698 LDP 700
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ L G + A+++ + + G P+ +N+L++ K+ E
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKARE 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +Y + G D T+ IL+ K G I+++ RLL +L+ G SLY
Sbjct: 368 VAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDV 427
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ D+A E+ KG + + +LI R G +A M G
Sbjct: 428 MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCG 487
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
TP S + + GL C K L E
Sbjct: 488 FTPSSSTCNSLLMGL--CRKGWLQE 510
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ G A + A ++VNKM G DPD+ T+N+ + C+ +
Sbjct: 658 MQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRK 717
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
+ V + + G D TY ++ + + ++D A L L++ G P
Sbjct: 718 MNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIP 769
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 2/164 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG ++++ G G ++ A + M + G PD+ TFN LI CK+ +
Sbjct: 623 MRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFD 682
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D++TY + + +++A +L L+ G P Y
Sbjct: 683 MVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNT 742
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
++ G D A +++ G PN L++ C +G
Sbjct: 743 MLSG-ICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQG 785
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +++GL N G ++ + M + G D T+ L+ CK+G + + +
Sbjct: 63 NTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQ 122
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D Y +I + K G +D+A +L+ ++E G P +Y +I G +F+D
Sbjct: 123 EGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFED 182
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ + P Y TLI +G RF EA + + EM E G P + L+
Sbjct: 183 AIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIK 242
Query: 194 GLKNCGKHDL 203
GL C H +
Sbjct: 243 GL--CQDHKV 250
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL G L+ A ++N MI+ G P+ + +N+LI + + + E + ++ +
Sbjct: 135 MISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRH 194
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY LI + K EA+ L+ ++E G NP Y+ +IKG + + + A
Sbjct: 195 CSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMAL 254
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++++ KG P+ ++ LI G+ A+ +M P ++ + +G
Sbjct: 255 QLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGF 314
Query: 196 KNCG 199
G
Sbjct: 315 YKGG 318
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+NP V LL++GL +E A Q+ N++I +G PD++ N LI +C G+
Sbjct: 225 MLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+Y+ + ++ TY L+ K G A + ++ +G P Y
Sbjct: 285 TEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNI 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+KG + A F ++ K P
Sbjct: 345 TLKGLCACNRISVAILFLNDAVTKNIVP 372
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ GLL A E A ++ ++ + P + T+N+LI +CK
Sbjct: 155 MIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGER 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V TY +LI + + ++ A +L + ++ G P ++
Sbjct: 215 FAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNI 274
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ + A + ++ PN Y TL+ +GG A + G
Sbjct: 275 LIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNG 334
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P +++ GL C + +A
Sbjct: 335 LLPDIISYNITLKGLCACNRISVA 358
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ +P + ++ G AG +++ + M ++GS ++ +FN+++ + +GE
Sbjct: 16 MAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGS-RNVASFNTMMRGLFNNGE 74
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + + G D +TY IL+ K G +++ +L ++G Y+
Sbjct: 75 VDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSA 134
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A + + G PN VY LI +F +A E+
Sbjct: 135 MISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRH 194
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+P ++ + +GL C AE
Sbjct: 195 CSPTIVTYNTLINGL--CKGERFAE 217
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G + +A+++ +M + PD +N+++ K+G ++ C +++ + + GS +V++
Sbjct: 3 SGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGS-RNVAS 61
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ ++ + G +DE F + + E G + Y ++ G + G + + K
Sbjct: 62 FNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAK 121
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G + Y+ +I+ + G+ +A + L M E G P ++ ++ + +GL K +
Sbjct: 122 QEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFE 181
Query: 203 LAEKI 207
A ++
Sbjct: 182 DAIRV 186
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 1/152 (0%)
Query: 56 CKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
C+SG + +Y + + D Y ++ KAG I F L + +G
Sbjct: 1 CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVA 60
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
S + +++G F G+ D+ F + +K G + Y L+ + G ++ + L
Sbjct: 61 S-FNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ G + + + GL GK D A +
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSV 151
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V G AG ++ A+ + ++MI++G P + T+N++I+ +CK VE V M+ + + G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V+TY +LI + AG L+ + +G P Y +I+ + + A
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT---MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
F ++ PN Y LI+ + R V A L+EM E G P F+ V
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVL 450
Query: 193 DGLKNCGKHDLAEKIEQLE 211
+GL G A++I +L+
Sbjct: 451 NGLLLTGNQAFAKEILRLQ 469
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
+AG + A ++ M + G DL +FN++++ +CKS VE E++ ++ S D
Sbjct: 138 SAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTV 196
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY +++ +A +L +VE G NP + Y ++KG FR GQ A+ FF E+
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K + + YTT++ G G A N EM G+ P ++ + L C K
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL--CKKD 314
Query: 202 DLAEKIEQLEVSLR 215
++ + E +R
Sbjct: 315 NVENAVVMFEEMVR 328
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 80/172 (46%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A +++ +M+++G +P+L T+N++++ ++G++ E + + K DV TY ++
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
AG I A + ++ +G P + Y +I+ ++ ++A F E+ +G+ P
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
N Y LI G F + M G P + ++++ C +
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V L+ G G L+ A + NKMI + PD+ TFN L++ CK G+
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G +V TY L+ +++A + + + + G NP Y
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+A F ++ K PN YT+LI + G+ A + EM + G
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P + + D L C H + + I L
Sbjct: 384 VPPDIITYSSILDAL--CKNHQVDKAIALL 411
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 8/215 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G + A + N M + G +PD +++N +I CK +
Sbjct: 274 MMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKK 333
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + +V TY LI + K+G I A +L+ + + G P Y+
Sbjct: 334 VDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 393
Query: 121 IIKGAFRRGQFDDAFCFFSEIK--------IKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
I+ + Q D A +++K +KG+ + YT +I G F EA
Sbjct: 394 ILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 453
Query: 173 LMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L +M + G P ++ ++++ L ++D+AEK+
Sbjct: 454 LSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKL 488
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G NP + ++++ G ++ A + KM + P++ T+ SLI+ +CKSG+
Sbjct: 309 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 368
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL----VED----GHN 112
+ + +++ + G D+ TY ++ A+ K +D+A LL L ED G+N
Sbjct: 369 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYN 428
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANY 172
Y +I+G +G F++A S+++ G P+ Y +I + A
Sbjct: 429 LDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKL 488
Query: 173 LMEMTEMGL 181
L EM GL
Sbjct: 489 LREMIARGL 497
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 87/189 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +A Q++ ++ + P++ +N++I+++CK V ++Y + G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI G + +A L + ++ + P + ++ G + G+ +
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ + +G PN Y +L+ + +A + M + G+ P ++ ++++ +G
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328
Query: 196 KNCGKHDLA 204
K D A
Sbjct: 329 CKIKKVDEA 337
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 13/213 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ K PP+ ++ L+ +A + +M +G +L T N LI + G+
Sbjct: 51 LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110
Query: 61 VEFCVEMYYSVCKLGSCADVST-------------YKILIPAVSKAGMIDEAFRLLHNLV 107
++ ++ K G +V T Y LI + K G A +LL +
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD 170
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
P +Y II + ++AF +SE+ +G P+ Y+ LI+ G+
Sbjct: 171 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLK 230
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+A + +M + P F+++ DG GK
Sbjct: 231 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
>gi|255685746|gb|ACU28362.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
Length = 178
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K G +++A RLLH ++++G NP Y+ ++ G
Sbjct: 8 VFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLC 67
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR A EM+E G T S
Sbjct: 68 KNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEEMSEKGCTRDSY 127
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D GK D A
Sbjct: 128 CYNALIDAFTKHGKVDEA 145
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G +E A +++++MI +G +PD+ T++ ++ +CK+G
Sbjct: 12 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGR 71
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +D A RL + E G Y
Sbjct: 72 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEEMSEKGCTRDSYCYN 130
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 131 ALIDAFTKHGKVDEALALFKRME-EEEGCDQTVYTYTILISG 171
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
E + + N++ G P ++Y +I G + G +DA + +G P+ Y+ ++
Sbjct: 4 EGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVV 63
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 64 NGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERL 113
>gi|255685732|gb|ACU28355.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
Length = 178
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K G +++A RLLH ++++G NP Y+ ++ G
Sbjct: 8 VFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLC 67
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR A EM+E G T S
Sbjct: 68 KNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEEMSEKGCTRDSY 127
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D GK D A
Sbjct: 128 CYNALIDAFTKHGKVDEA 145
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G +E A +++++MI +G +PD+ T++ ++ +CK+G
Sbjct: 12 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGR 71
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +D A RL + E G Y
Sbjct: 72 VEEALD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEEMSEKGCTRDSYCYN 130
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 131 ALIDAFTKHGKVDEALALFKRME-EEEGCDQTVYTYTILISG 171
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+ E + + N++ G P ++Y +I G + G +DA + +G P+ Y+
Sbjct: 2 LXEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSV 61
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 62 VVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERL 113
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P + + ++ G ++G A++++ +M ++ PD+ TF+ LI + K G+
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y + G + TY +I SK +D A R+ + + G +P ++
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + DD E+ +G N YTTLI + G A + L EM G
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ P + + DGL N GK L + +E +V +S
Sbjct: 454 VCPNVVTCNTLLDGLCNNGK--LKDALEMFKVMQKS 487
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ + L A K+ K G P L TF++L+ +C V + ++ +CK
Sbjct: 116 ILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK- 174
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V + L+ + + G + EA LL +VEDG P Y I+ G + G A
Sbjct: 175 ---PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 231
Query: 135 FCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
++ ++ PN +Y+ +I + GR +A N EM E G++P ++ + +
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291
Query: 194 GLKNCGKHDLAEKI 207
G + G+ A+++
Sbjct: 292 GFCSSGRWSEAQRL 305
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 11/224 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G L+ G G L +A ++ +MI G P++ T N+L++ +C +G+
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGK 473
Query: 61 VEFCVEMYYSVCK----LGSC-------ADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
++ +EM+ + K L + DV TY ILI + G EA L +
Sbjct: 474 LKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR 533
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
G P Y +I G ++ + D+A F + KG P+ +TTLI + GR +
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDG 593
Query: 170 ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
EM G+ + + + G G + A I Q +S
Sbjct: 594 LEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 11/194 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD-----------PDLETFN 49
M G P V + L+ GL N G L+ A +M M K D PD++T+N
Sbjct: 449 MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYN 508
Query: 50 SLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
LI + G+ E+Y + G D TY +I + K +DEA ++ ++
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK 568
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
G +P + +I G + G+ D F E+ +G N Y TLI + G A
Sbjct: 569 GFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGA 628
Query: 170 ANYLMEMTEMGLTP 183
+ EM G+ P
Sbjct: 629 LDIFQEMISSGVYP 642
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V+ ++L+ GL+N G A+++ +M +G PD T+NS+I+ +CK ++ +M
Sbjct: 502 PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQM 561
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ S+ G DV T+ LI K G + + + + G Y +I G +
Sbjct: 562 FDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQ 621
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
G + A F E+ G P+ ++T
Sbjct: 622 VGNINGALDIFQEMISSGVYPDTITIRNMLT 652
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 4/219 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSG 59
M + G P +V G+ G SA ++ KM + P++ ++++I+ + K G
Sbjct: 203 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDG 262
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + + G ++ TY +I +G EA RLL + E +P ++
Sbjct: 263 RQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFS 322
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G+F +A ++E+ +G PN Y ++I + R A M
Sbjct: 323 VLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK 382
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
G +P F ++ DG CG + + ++ L E+S R +
Sbjct: 383 GCSPDVITFSILIDGY--CGAKRVDDGMKLLHEMSRRGL 419
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 8/189 (4%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L+ A + M++ P + F L+ + + + + ++ + ++ ++ I
Sbjct: 57 LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + A + + G +P ++ ++ G + +A FF +I
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH---- 201
PN +TTL+ R GR VEA L M E GL P + + DG+ G
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232
Query: 202 DLAEKIEQL 210
+L K+E++
Sbjct: 233 NLLRKMEEV 241
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ G G + SA+ M +M+ G PD+ TF SLI+ C++G+
Sbjct: 334 MISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGK 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++++ + + T+ IL A+ K + EA L +L P +Y P
Sbjct: 394 VERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNP 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D+A +E++ K P++ YT LI GR EA + M G
Sbjct: 454 VIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTG 513
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P S + L G + A +I Q+
Sbjct: 514 CAPDSITMTSLISCLLKAGMPNEAYRIMQI 543
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 6/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G +P LV +AG A+ V+ G + L +N L+ + + +
Sbjct: 163 MNIDGHSPDASVLGFLVSSATDAGKFNIARTWVD-----GVEFSLVVYNKLLNQLVRGNQ 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + L D ++ ILI + + G +D+AF L + + G +P Y
Sbjct: 218 VDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNT 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G R + D E+ K P+ YT++I+ + G+ +A+ M
Sbjct: 278 LINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISS 337
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G+ P + F+++ +G G AE + +
Sbjct: 338 GIKPNAFTFNILINGFGKVGDMVSAENMYE 367
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 4 KGFNPPVRGRDLLVQ---------GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIET 54
+GF ++ R ++ Q G AG ++ A ++ +M ++ PD T+ LI
Sbjct: 433 RGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIG 492
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
C G + + ++ + G D T LI + KAGM +EA+R++ ED
Sbjct: 493 HCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASED 547
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
S L C TY L+ ++S+ G + A + + DGH+P S+ ++ A G
Sbjct: 127 SRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAG 186
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT-PISRC- 187
+F+ A + + G + VY L+ RG + EA + E +MGL P C
Sbjct: 187 KFNIARTW-----VDGVEFSLVVYNKLLNQLVRGNQVDEAVCFFRE--QMGLHGPFDSCS 239
Query: 188 FDLVTDGLKNCGKHDLA 204
F+++ GL GK D A
Sbjct: 240 FNILIRGLCRIGKVDKA 256
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + G + A+ + + + K G P + +FN+L+ K G++ + ++
Sbjct: 140 NILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + + ++ G L FN L+ K GE+ ++ ++ K G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ K G ++E FRL + + G P Y+ +I G + + DDA
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CKKGDLKQ 294
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YKP 414
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++MI +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYKPS 415
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G ++E FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ KG PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K G P + +FN+L+ K G++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YMP 414
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++MI +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + LV GL E AK+ +M+ QG PD+ FN+++ +C G+
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + ++G+ DV +Y LI G IDEA + L ++ G P Y
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ DDA+ F E+ G P Y+T++ RF EA + M G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
++++ +GL D A K+ Q
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQ 647
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + L+ G L+ G + +M+ +M G PD T+ SL+ +C +G
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ S+ + G +V+ Y ILI + G + E LL+ +VE+G +P ++
Sbjct: 324 CREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I ++ D+A F+++K +G P+ + LI + GR +A +M G
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK--IEQLEVSLR 215
+ P F+ + GL K + A++ E L +R
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V L+ L G ++ A N+M+ +G P++ FNSL+ +C +
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E Y+ + G DV + ++ + G + +A RL+ + G P Y
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + G P+ Y TL+ R GR +A EM G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 181 LTPISRCFDLVTDGL 195
+TP + + GL
Sbjct: 584 ITPGVVTYSTILHGL 598
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++ GL A ++ A+ + +MI +G PD +T+N LI G+
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V M + G D TY L+ + G EA +++ G P ++Y
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGI 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G + + + G P+ ++ + T + EA + +M + G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L+P F + D L G+ D A
Sbjct: 409 LSPDVVNFGALIDALCKLGRVDDA 432
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ G G ++ A + +M+ +G P++ T+ ++I+ +CK+ V+ +
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D TY LI G E R+L + G P Y ++
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +A FF + KG PN +Y LI G E + L M E GL+P
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380
Query: 188 FDLV 191
F+++
Sbjct: 381 FNII 384
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G AG ++ A + +M++ G P + T+++++ + +
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y ++ G ++ Y I++ +SK +DEAF+L +L + +
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I F+ G+ +DA F+ I G P+ Y + G E + M + G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 181 LTPISRCFDLVTDGLKNCG 199
TP SR + + L + G
Sbjct: 724 TTPNSRMLNALVRRLLHRG 742
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G L ++N M++ G PD FN + K
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G DV + LI A+ K G +D+A + ++ +G P ++
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +++ A F+ E+ +G P+ + T++ G+ ++A + M +G
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
P + + G G+ D A K
Sbjct: 514 TRPDVISYTTLIGGHCLVGRIDEAAK 539
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 7/210 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI-KQGSD--PDLETFNSLIETICK 57
M + G P V + L++G N E A ++++ M QG P++ ++ ++I
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFT 215
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+V+ ++ + G +V TY +I + KA ++D A + +++ G P
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G G++ + E+ G P+ Y +L+ GR EA + M
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335
Query: 178 EMGLTPISRCFDLVTDGLKNCGK----HDL 203
G+ P + ++ G G HDL
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDL 365
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ G G ++ A + ++ M+ G PD T+N+L+ C++G
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G V TY ++ + EA L N++ G +Y
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + D+AF F + K + +I + GR +A + ++ G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688
Query: 181 LTPISRCFDLVTDGL 195
L P + L+ + L
Sbjct: 689 LVPDVFTYCLIAENL 703
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ GL AK++ MI G ++ +N ++ + K+
Sbjct: 579 MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNC 638
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ S+C +++T+ I+I A+ K+G ++A L + G P Y
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCL 698
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I + G ++ FS ++ G PN + L+ G A YL ++ E
Sbjct: 699 IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDE 756
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 7/190 (3%)
Query: 27 ESAKQMVNKMIKQGS---DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
E + N+MI++ + PDL T++ LI C+ G +E + + K G +
Sbjct: 73 ELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVI 132
Query: 84 KILIPAVSKAGMIDEAFRLL-HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF---S 139
L+ + A + EA +L + E G P Y ++KG + ++A +
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+ + + PPN Y T+I G+ +A N +EM + G+ P + V DGL
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 200 KHDLAEKIEQ 209
D AE + Q
Sbjct: 253 VVDRAEGVFQ 262
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 65/149 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ GL ++ A ++ + + ++ TFN +I + KSG E + ++ ++
Sbjct: 627 NIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY ++ + + G ++E L + + G P + +++ RG
Sbjct: 687 YGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITR 746
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
A + S++ K LI++ R
Sbjct: 747 AGAYLSKLDEKNFSLEASTTAMLISLLSR 775
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G+ G L+ A + +N M G P++ T N ++ ++C +G
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G V T+ ILI + + ++ A +L + + G P Y P
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNP 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A + + +G P+ Y TL+T + G+ A L +++ G
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+P+ ++ V DGL GK + A +E LE
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYA--VELLE 477
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A + + M+ +G PD+ T+N+L+ +CK G+
Sbjct: 374 MPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ VE+ + G + TY +I ++K G + A LL + G P Y+
Sbjct: 434 VDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYST 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ D+A F +++ P+ Y ++ + + A ++L M E G
Sbjct: 494 LLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 553
Query: 181 LTPISRCFDLVTDGLKN 197
P + ++ +G+ +
Sbjct: 554 CKPTEATYTILIEGIAD 570
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 2/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + +++ L ++G L+ A +++++ +++ PD+ T+ LIE C V +++
Sbjct: 206 PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKL 265
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G DV TY +LI + K G +DEA + L+N+ G P + I++
Sbjct: 266 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCS 325
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G++ DA S++ KG P+ + LI R A + L +M + G P S
Sbjct: 326 TGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLS 385
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEV 212
++ + G C + + IE LE+
Sbjct: 386 YNPLLHGF--CQEKKMDRAIEYLEI 408
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 34/240 (14%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V L++G +G + A +++ + G+ PD+ T+N LI CKSGE++
Sbjct: 135 QGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDK 194
Query: 64 CVE----------------MYYSVCKLGSCA----------------DVSTYKILIPAVS 91
+E + S+C G DV TY ILI A
Sbjct: 195 ALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATC 254
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+ +A +LL + + G P Y +I G + G+ D+A F + + G PN
Sbjct: 255 NDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVI 314
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ ++ GR+++A L +M G +P F+++ + L C K L I+ LE
Sbjct: 315 THNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFL--CRKRLLGRAIDVLE 372
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC---- 56
M G P V +++++ + + G A+++++ M+++G P + TFN LI +C
Sbjct: 304 MPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRL 363
Query: 57 ------------KSGEVE-----------FC--------VEMYYSVCKLGSCADVSTYKI 85
K G V FC +E + G D+ TY
Sbjct: 364 LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 423
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ A+ K G +D A +L+ L G +P Y +I G + G+ + A E++ KG
Sbjct: 424 LLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG 483
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
P+ Y+TL+ GR G+ EA +M + + P + ++ + GL
Sbjct: 484 LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ ++ L+ G LE + + +MI QG PD+ SLI C+SG+ + + +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G+ DV TY +LI K+G ID+A +L + P Y I++ G+ +
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + P+ YT LI +A L EM + G P ++++ +
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Query: 194 GLKNCGKHDLAEK 206
G+ G+ D A K
Sbjct: 287 GICKEGRLDEAIK 299
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + +++V G+ G ++ A + + + G +P+ ++N +++ +C +
Sbjct: 18 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 77
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + G +V T+ +LI + + G+++ A +L + + G P Y P
Sbjct: 78 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 137
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + D A F + +G P+ Y TL+T R G A L ++ + G
Sbjct: 138 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 197
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P+ ++ V DGL GK
Sbjct: 198 CAPVLISYNTVIDGLTKAGK 217
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +++++GL A E A++++ +M ++G P++ TFN LI +C+ G VE
Sbjct: 57 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 116
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + K G + +Y L+ A K +D+A L +V G P Y ++
Sbjct: 117 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 176
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ D A ++K KG P Y T+I + G+ EA L EM GL P
Sbjct: 177 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236
Query: 185 SRCFDLVTDGL 195
+ + GL
Sbjct: 237 IITYSTIAAGL 247
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ L G +E A +++ ++ K G P+ ++N L+ CK +
Sbjct: 88 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 147
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ +Y L+ A+ ++G +D A LLH L + G P Y
Sbjct: 148 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 207
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A +E+ KG P+ Y+T+ R R +A ++ +MG
Sbjct: 208 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 267
Query: 181 LTPISRCFDLVTDGL 195
+ P + ++ + GL
Sbjct: 268 IRPNTVLYNAIILGL 282
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ ++ A ++ M+ +G PD+ ++N+L+ +C+SGEV+
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + + G + +Y +I ++KAG EA LL+ +V G P Y+ I G
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 246
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R + +DA F +++ G PN +Y +I + A + M G P
Sbjct: 247 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 306
Query: 185 SRCFDLVTDGL 195
+ ++ +GL
Sbjct: 307 ESTYTILIEGL 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L +G ++ A ++++++ +G P L ++N++I+ + K+G+
Sbjct: 158 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G D+ TY + + + I++A R + + G P LY
Sbjct: 218 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G +R + A F+ + G PN YT LI G EA + L E+ G
Sbjct: 278 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337
Query: 181 LT 182
+
Sbjct: 338 VV 339
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+ TY +++ + + G +D+A L NL G P Y ++KG +++DA
Sbjct: 22 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 81
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ KG PPN + LI+ R G A L ++ + G TP S ++ +
Sbjct: 82 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 141
Query: 195 LKNCGKHDLAEKIEQLEVS 213
K D A L VS
Sbjct: 142 FCKQKKMDKAMAFLDLMVS 160
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
A K +A +LL + + G P Y ++ G + G+ DDA F + G P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
N Y ++ R+ +A + EM + G P F+++ L C K + +E
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL--CRKGLVEPALE 118
Query: 209 QLE 211
LE
Sbjct: 119 VLE 121
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G ++E FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ KG PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K G P + +FN+L+ K G++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YKP 414
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++MI +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWXGSKLLKEMQRDGYKPS 415
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + LV GL E A+++ +++ QG D FN+L+ +C+ G
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + ++G DV +Y L+ G IDEA +LL +V G P Y
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + DDA+ F E+ +KG P+ Y T++ + GRF EA + M
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 582
Query: 181 LTPISRCFDLVTDGL 195
++++ +GL
Sbjct: 583 TQMNIYTYNIIINGL 597
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G L+ G + QM+ +M G PD + L++ +CK+G
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGR 287
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ SV + G +V+ Y IL+ + G + E L +V +G +P ++
Sbjct: 288 CTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNI 347
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ ++ D+A F +++ + PN Y LI + GR +A +M + G
Sbjct: 348 MFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEG 407
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+TP F + GL K + AE++ E L+ +R
Sbjct: 408 MTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIR 444
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + L+ L G ++ A N+MI +G PD+ F+SL+ +C +
Sbjct: 368 MRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDK 427
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+++ V G D + L+ + + G + EA RL+ ++ G P Y
Sbjct: 428 WEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNT 487
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D+A I G P++ Y TL+ + R +A + EM G
Sbjct: 488 LVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKG 547
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LTP ++ + GL G+ A+++
Sbjct: 548 LTPDVVTYNTILHGLFQTGRFSEAKEL 574
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + ++ GL G AK++ MI + ++ T+N +I +CK+ V+
Sbjct: 546 KGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDE 605
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+M++S+C D+ T I+I A+ K G ++A L + G P Y I +
Sbjct: 606 AFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAE 665
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ G ++ FS ++ G PN + L+ G A YL ++ E
Sbjct: 666 NLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDE 720
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ G A ++ A + +M+ +G PD+ T+N+++ + ++G
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y S+ + ++ TY I+I + K +DEAF++ H+L A I+ G
Sbjct: 572 KELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQ-LDIFTANIMIG 630
Query: 125 AFRR-GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A + G+ +DA F+ I G P+ Y + + G E M E G P
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAP 690
Query: 184 ISRCFDLVTDGLKNCG 199
SR + + L + G
Sbjct: 691 NSRMLNALVRWLLHRG 706
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V +L+ G G L ++ M+ G PD FN + K ++
Sbjct: 301 KGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDE 360
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ + + ++ TY LI A+ K G +D+A + ++++G P +++ ++
Sbjct: 361 AMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVY 420
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G +++ A F E+ +G + + TL+ R GR +EA + M +G+ P
Sbjct: 421 GLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRP 480
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
++ + DG G+ D A K+ + VS+
Sbjct: 481 DVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 16 LVQGLLNAGYLESAKQ-MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L++GL +A ++ A ++ +M + G PD+ +++ L++ C E +E+ +
Sbjct: 134 LLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADD 193
Query: 75 GSCA---DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
G + +V TY +I + KA M+D A + ++++ G P Y +I G G++
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKW 253
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+ E+ G P+ +Y L+ + GR EA N + G+ P + ++
Sbjct: 254 KEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGIL 313
Query: 192 TDGLKNCG 199
G G
Sbjct: 314 LHGYATEG 321
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + LV G G ++ A ++++ ++ G PD T+N+L+ CK+ ++
Sbjct: 477 GVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDA 536
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G DV TY ++ + + G EA L +++ Y II G
Sbjct: 537 YSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIING 596
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D+AF F + K + +I +GGR +A + ++ GL P
Sbjct: 597 LCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPD 656
Query: 185 SRCFDLVTDGL 195
+ L+ + L
Sbjct: 657 VETYCLIAENL 667
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS---DPDLETFNSLIETICK 57
M + G P V +L++G N E A ++++ M G P++ T+ ++I+ +CK
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ V+ ++ + G + TY LI G E ++L + G P +
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
YA ++ + G+ +A F + KG PN +Y L+ G E ++L M
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334
Query: 178 EMGLTPISRCFDLV 191
G++P F+++
Sbjct: 335 GNGVSPDHHIFNIM 348
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 8/182 (4%)
Query: 27 ESAKQMVNKMIKQGS---DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG-SCADVST 82
E + N+MI++ S P T+ LI C+ G ++ + + K G D
Sbjct: 71 ELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVI 130
Query: 83 YKILIPAVSKAGMIDEAFR-LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
+ L+ + A +DEA LL + E G P Y+ ++KG + ++A S +
Sbjct: 131 FSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMM 190
Query: 142 KIKG---HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
G H PN YTT+I + A M + G+ P + + + G +
Sbjct: 191 ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSI 250
Query: 199 GK 200
GK
Sbjct: 251 GK 252
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLL-NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M + G V ++L++ L N+G +++A ++ +M K+G DPD T+ +LI +CK G
Sbjct: 146 MREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLG 205
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ E++ + G V TY L+ + +AG +DEA L + + P Y+
Sbjct: 206 KTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYS 265
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + G +A + K H PN Y+TLI + G+ EA L M
Sbjct: 266 SLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
GL P + + + +G N K A
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEA 350
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P L+ GL G AK++ +M +G P + T++ L+ +C++G
Sbjct: 182 MPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGN 241
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + K +V TY L+ + K G EA LL +V H P Y+
Sbjct: 242 VDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYST 301
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A +K++G P+ +Y +I +F EAA YL EM
Sbjct: 302 LINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQ 361
Query: 181 LTP 183
++P
Sbjct: 362 ISP 364
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ GL AG ++ A + +KM K+ +P++ T++SL++ +CK+G
Sbjct: 217 MDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGG 276
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + + ++ TY LI + K G + EA L + G P LY
Sbjct: 277 SLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGK 336
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
II G +F +A + E+ + PNR ++ + +
Sbjct: 337 IINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKL 375
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
++ V+ +++VQGL G L + Q+ M +G D TF+SL++ CK G++
Sbjct: 369 WSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAA 428
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
++ + G D + ++ + EAF
Sbjct: 429 RIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAF 463
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 44/200 (22%)
Query: 1 MSDKGFNPPVRGRDLLVQGLL-NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M K P V L+ GL N G LE A +++ M+++ P++ T+++LI +CK G
Sbjct: 252 MKKKAIEPNVFTYSSLMDGLCKNGGSLE-AMELLEMMVRKRHKPNMVTYSTLINGLCKEG 310
Query: 60 EVEFCVE---------------MYYSV----CKLGSCADVSTY----------------- 83
++ VE +Y + C + + +TY
Sbjct: 311 KLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWS 370
Query: 84 ------KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCF 137
+++ + G ++ +F+L + G + + ++K ++G A
Sbjct: 371 LHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARI 430
Query: 138 FSEIKIKGHPPNRPVYTTLI 157
F E+ + G P+ +++ ++
Sbjct: 431 FDEMVLDGCVPDHGIWSAVV 450
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L++ G +E+A++ VNKM +G P +ET+N LI + E
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ C ++ + G+ +V +Y LI + K + EA + ++ + G +P +Y
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G+ +DAF F E+ KG N Y TLI G+ EA + L+E++ G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 181 LTP 183
L P
Sbjct: 595 LKP 597
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 1/214 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++ G G L A+ + M KQG PD +N LI C+ GE+E
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G V TY ILI + D+ F +L + ++G P Y +I
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + +A +++ +G P +Y LI C G+ +A + EM + G+
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
++ + DGL GK AE + LE+S + +
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDL-LLEISRKGL 595
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 8/198 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V L+ L L A+ + M +G P + +N LI+ C G+
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + K G ++ TY LI +S G + EA LL + G P Y
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G + E+K G P Y LI++C + G +E L EM
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG--IELTERL--FGEMS 660
Query: 181 LTPISRCFDLVTDGLKNC 198
L P LV +G+ +C
Sbjct: 661 LKPDL----LVYNGVLHC 674
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + + L++GL AG +E A+ ++ +M G PD TF+ L + + +
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +Y + G + T IL+ A+ K G I++A +L + G P +Y
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G A ++ +G P+ Y LI G A + +M G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 181 LTPISRCFDLVTDG 194
++P ++++ G
Sbjct: 455 VSPSVETYNILIGG 468
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D GF P +L G + E+A + + G + T + L+ +CK G+
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 61 VEFCVEMY--------------YSVCKLGSC--ADVSTYKILIPAVSKAGM--------- 95
+E E+ Y+ G C D+ ++ I A+ K GM
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 96 ----------IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ A + ++ + G +P Y +I G R+ +FD F E++ G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
PN Y TLI +G + +EA +M + G++P R ++++ DG + GK
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + L+ G AG E + ++ +M +P L TFN+L++ + K+G VE +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ LG D T+ IL S + A + V+ G + ++ +
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ + A KG PN +Y T+I R G V A + M + G+ P
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 188 FDLVTDGLKNCGKHDLAEK 206
++ + G+ + AEK
Sbjct: 427 YNCLIRRFCELGEMENAEK 445
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 5/207 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ GL + A+Q+ ++M+ + P L T+N+LI+ CK+G E ++
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + T+ L+ + KAGM+++A +L + + G P ++ + G
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ + A + G N + L+ + G+ +A L GL P
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 188 FDLVTDGLKNCGKHDLA---EKIEQLE 211
++ + DG C K DL KIE +E
Sbjct: 392 YNTMIDGY--CRKGDLVGARMKIEAME 416
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
++ N+M P + +N LI+ +CK + +++ + + TY LI
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
KAG +++F++ + D P + ++KG F+ G +DA E+K G P+
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 151 PVYTTL 156
++ L
Sbjct: 320 FTFSIL 325
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 4/177 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++ LL+ G +E +++ +M PDL +N ++ G+
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGD 680
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + D +TY LI K G + E L+ + P Y
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
I+KG + A+ ++ E++ KG + + L++ R EA + EM
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 36/226 (15%)
Query: 15 LLVQGLLN-AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
LL+ LLN + + A + + +G P ++ L++ + K+ + + ++ ++ +
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
Y I A K + + L + + D P +Y +I G + + +D
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG----------------------------- 163
A F E+ + P+ Y TLI C G
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 164 -----GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G +A N L EM ++G P + F ++ DG + K + A
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P LL++ L N G A + + M +G PD T+ SLI C +G
Sbjct: 210 MIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGR 269
Query: 61 VEFCVEMYYSVCK-LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ ++ V + + D Y +LI + +A ++EA + +V+ G P Y
Sbjct: 270 ITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYN 329
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G F+ + D A F ++ KG PN +Y+T I + G+ EA + + E
Sbjct: 330 ALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVER 389
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + ++ + GL + D A ++
Sbjct: 390 GCVPDNVTYNALIRGLFGANRMDEAHRL 417
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++ L+ G A ++V +MIK+ S PD T+ +LI +CK +
Sbjct: 110 GSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKK-SVPDGMTYTALISVLCKHNRADDA 168
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + + ++ Y L+ A + +D A+RL +++ G+ P S Y +++
Sbjct: 169 MKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRC 228
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G+ A+ S ++ +GH P+ Y +LI C GR EA E+ E
Sbjct: 229 LCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLE 282
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
M +G P L+ G AG + AK + ++++ + + D +N LIE +C++
Sbjct: 245 MRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRAS 304
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+VE +E+ + G + TY LI KA +D+A +L + E G +P +Y+
Sbjct: 305 KVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYS 364
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I G + G+ ++A FF + +G P+ Y LI R EA EM E
Sbjct: 365 TFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGER 424
Query: 180 G 180
G
Sbjct: 425 G 425
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++GL A +E A ++ M+ +G P L+T+N+LI K+ EV+ ++++ + +
Sbjct: 294 NVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEE 353
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + Y I + K G I+EA VE G P Y +I+G F + D+
Sbjct: 354 KGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDE 413
Query: 134 AFCFFSEIKIKGHPPNRPVYT 154
A + E+ +G+ +R + T
Sbjct: 414 AHRLYREMGERGYIADRSLRT 434
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P +LLV+GL ++ A+ M++ M+ +G DPD+ T L++ C+
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + G + Y ++ A+ +G D F+ V DG P Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A E+ IK P+ YT LI++ + R +A M E
Sbjct: 121 MLDCLIKTGKTREASEVVGEM-IKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 181 LTP 183
+ P
Sbjct: 180 IVP 182
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P ++ + L+ G A ++ A Q+ M ++G P+ +++ I+ +CK G+
Sbjct: 316 MVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGK 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + + G D TY LI + A +DEA RL + E G+ SL
Sbjct: 376 INEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSLRTL 435
Query: 121 IIKGAFRRGQFDDAF 135
AF+R + + +F
Sbjct: 436 ----AFQRSREEQSF 446
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ +G + + + + GS P + + ++++ + K+G+ E+ + K
Sbjct: 86 ILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIK-K 144
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S D TY LI + K D+A ++ +VE P +Y ++ R + D A+
Sbjct: 145 SVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAY 204
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F E+ +G+ P+ Y L+ GGR A + M G P
Sbjct: 205 RLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVP 252
>gi|255685730|gb|ACU28354.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
gi|255685734|gb|ACU28356.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
gi|255685738|gb|ACU28358.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
gi|255685740|gb|ACU28359.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
gi|255685742|gb|ACU28360.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
Length = 178
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K G +++A RLLH ++++G NP Y+ ++ G
Sbjct: 8 VFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLC 67
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F + G N Y++LI G+ GR A EM+E G T S
Sbjct: 68 KNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEEMSEKGCTRDSY 127
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D GK D A
Sbjct: 128 CYNALIDAFTKHGKVDEA 145
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G +E A +++++MI +G +PD+ T++ ++ +CK+G
Sbjct: 12 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGR 71
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C+ A S Y LI + KAG +D A RL + E G Y
Sbjct: 72 VEEAMD-YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEEMSEKGCTRDSYCYN 130
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
+I + G+ D+A F ++ + ++ VYT I + G
Sbjct: 131 ALIDAFTKHGKVDEALALFKRME-EEEGCDQTVYTYTILISG 171
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
LN GY + MI++GS P++ + LI+ K+G VE + + + + G DV
Sbjct: 2 LNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDV 56
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
TY +++ + K G ++EA +G Y+ +I G + G+ D A F E
Sbjct: 57 VTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEE 116
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ KG + Y LI + G+ EA M E
Sbjct: 117 MSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEE 154
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++E + + N++ G P ++Y +I G + G +DA + +G P+ Y+
Sbjct: 2 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSV 61
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 62 VVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERL 113
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + ++++ L N L A +++++++ P + T+ LIE G
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGG 222
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY +I + K GM++ A L+ +L G P Y
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ +G++D+ +E+ +G PN+ Y+ LI+ R GR EA + L M E
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
LTP + +D + L G+ DLA I +S
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 375
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P V ++L++ LN G + +++V +M +G +P+ T++ LI ++C+ G
Sbjct: 268 LTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + D +Y LI A+ K G +D A ++ ++ +G P Y
Sbjct: 328 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 387
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + G + A F++++ G PPN Y T+I+ G A + M G
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 181 LTP 183
+ P
Sbjct: 448 VDP 450
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ + G + A +++ +M+ +G PD+ T+N++I +CK G VE E+
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 264
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G DV +Y IL+ A G DE +L+ + G P Y+ +I R
Sbjct: 265 ITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 324
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A + K P+ Y LI+ + GR A + M G P
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 384
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + L G + A +I
Sbjct: 385 YNTILAALCKNGNANQALEI 404
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG+ P V L++G N +E A + V ++++ ++PD+ +N++I CK
Sbjct: 94 LVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESHTEPDVFAYNAVISGFCKVNR 152
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G D+ TY I+I ++ + A ++L L+ D P Y
Sbjct: 153 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTI 212
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G ++A E+ +G P+ Y +I + G AA + +T G
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++++ N GK D EK+
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKL 299
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + +++G+ G +E A +++ + +G PD+ ++N L+ G+
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ EM+ C+ + TY ILI ++ + G IDEA +L ++E P
Sbjct: 293 WDEGEKLVAEMFSRGCE----PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 348
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y P+I + G+ D A + G P+ Y T++ + G +A ++
Sbjct: 349 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLA 204
MG P ++ + L +CG A
Sbjct: 409 RGMGCPPNVSSYNTMISALWSCGDRSRA 436
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P D L+ L G L+ A +++ MI G PD+ +N+++ +CK+G
Sbjct: 338 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ + +G +VS+Y +I A+ G A ++ ++ G +P Y
Sbjct: 398 ANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNS 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G ++A +++ G P Y ++ + R +A EM E G
Sbjct: 458 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 517
Query: 181 LTPISRCFDLVTDGL 195
P + L+ +G+
Sbjct: 518 CRPNETTYILLIEGI 532
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 5/214 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ L G ++ A ++ MI++ PD +++ LI +CK G
Sbjct: 303 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 362
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D+ Y ++ A+ K G ++A + + L G P S Y
Sbjct: 363 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 422
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G A + KG P+ Y +LI+ R G EA L +M + G
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482
Query: 181 LTPISRCFDLVTDGLKNCGKHD-----LAEKIEQ 209
P +++V GL + D AE IE+
Sbjct: 483 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK 516
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + L+ L G +E A +++ M + G P + ++N ++ +CK
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
++ + M+ + + G + +TY +LI + AG EA L ++L
Sbjct: 503 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V LV G AG LE +K++ N+M+ QG P+L FN LI+ +CK G+
Sbjct: 189 MKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGK 248
Query: 61 V---EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+ +++ S+ G + +Y ILI K ++EA L + + + G P
Sbjct: 249 IGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKT 308
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y+ ++ G + G+ DA F +K G + +Y + + G EA E+
Sbjct: 309 YSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELK 368
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLA-EKIEQL 210
+ + DGL GK ++A E +QL
Sbjct: 369 SYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQL 402
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIE---TICK 57
M G +P + ++L L N + + ++++G PD+ T+N+LI+ +CK
Sbjct: 116 MRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCK 175
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G + E++ + G +V +Y L+ AG ++E+ RL + +V+ G P
Sbjct: 176 VGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQ 235
Query: 118 YAPIIKGAFRRGQFDD---AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+ +I + G+ D A F + KG N YT LI + + EA N
Sbjct: 236 FNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYN 295
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
EM ++G P + + + GL GK A K+
Sbjct: 296 EMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKL 328
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 4 KGFNPPVRGRDLLVQGLL---NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+G+ P + + L++GL G+ + AK++ +M QG P++ +++SL+ C +G+
Sbjct: 154 RGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGK 213
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE---AFRLLHNLVEDG--HNPFP 115
+E ++ + G ++ + +LI + K G I + A +L ++ G HN
Sbjct: 214 LEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEIS 273
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y +I G + + ++A ++E+ G PN Y+TL+T + G+ +A
Sbjct: 274 --YTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGV 331
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
M G++ S + + DGL C L E +E
Sbjct: 332 MKASGISVDSCIYVIFLDGL--CKNGVLFEAME 362
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 6/193 (3%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ + L+ GL + + NKM G PDL T N L +C V +
Sbjct: 88 PPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAA 147
Query: 68 YYSVCKLGSCADVSTYKILIP---AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G D+ TY LI + K G DEA + + G P Y+ ++ G
Sbjct: 148 MTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 207
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMC--GRGGRFVEAANYLMEMTEMGL 181
G+ +++ F+E+ +G PN + LI +C G+ G A + M G
Sbjct: 208 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGC 267
Query: 182 TPISRCFDLVTDG 194
+ ++ +G
Sbjct: 268 EHNEISYTILING 280
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL- 74
L+ GL AG +E A + ++ ++G P++ T N +I C+ +V+ ++ + K+
Sbjct: 382 LIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKME 441
Query: 75 --GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
G D+ TY L+ ++ ++E LLH + +
Sbjct: 442 ENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 477
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK---QGSDPDLETFNSLIETICK 57
+S +G P V ++++ G ++ A + KM K G PD+ T+N+L+ C+
Sbjct: 402 LSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCE 461
Query: 58 SGEVEFCVEMYYSVCK 73
S ++E V + + + K
Sbjct: 462 SNKLEEVVNLLHKMFK 477
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G ++E FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ KG PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K G P + +FN+L+ K G++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YKP 414
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++MI +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYKPS 415
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+QG G L AK+++++++ G D+ F+S+I +CK G
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 514
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ +G Y +L+ G +++A R+ +V G P +Y
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F E+ KG P+ +Y +I GR V A EMTE G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Query: 181 LTPISRCFDLVTDGL 195
+ +++V GL
Sbjct: 635 IAMNKCTYNIVLRGL 649
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++ L G ++ A + N+MI QG PD ++ LI+ C G
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D+ + +I + K G + +A + V G +P +Y+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F + G PN VY TL+ + GR E + EM + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++++ DGL G+
Sbjct: 600 IKPSTILYNIIIDGLFEAGR 619
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP V +++ G G L + + M+ G PD+ TFN LI+ G
Sbjct: 350 MAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G DV TY+ +I A+ + G +D+A + +++ G P Y
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A SEI G + ++++I + GR ++A N +G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + + ++ DG GK + A ++ VS
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ G + G + A ++ +M + PD+ T + L+ ++CK G+
Sbjct: 280 MVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ ++ G +V +Y I++ + G + + L ++ DG P +
Sbjct: 340 IKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK G D A F+E++ G P+ Y T+I R G+ +A +M + G
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 181 LTPISRCFDLVTDGL 195
+ P + + G
Sbjct: 460 VAPDKYAYHCLIQGF 474
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P +L+ G G +E A ++ + M+ G +P+ + +L+ CK G ++
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G Y I+I + +AG A H + E G Y +++G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG 648
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ FD+A F E++ N T+I + R EA + ++ GL P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ ++ + N K L E+ E + S+++
Sbjct: 709 VVTYSIM---ITNLIKEGLVEEAEDMFSSMQN 737
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 95/207 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L+ L G ++ A+ + + M +G +P++ ++ ++ G + ++
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDL 381
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ T+ +LI A + GM+D+A + + + + G P Y +I R
Sbjct: 382 FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DDA F+++ +G P++ Y LI G ++A + E+ G+
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSL 214
F + + L G+ A+ I L V++
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNV 528
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V ++ G G + A + +M+++G PD T++S++ +CK+ ++
Sbjct: 216 SPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ G + TY LI S G EA R+ + P + ++
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC 335
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ +A F + +KG PN YT ++ G V+ + M G+ P
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 395
Query: 187 CFDLVTDGLKNCGKHDLA 204
F+++ NCG D A
Sbjct: 396 TFNVLIKAYANCGMLDKA 413
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCKLGSCADVSTYKI 85
E A ++++ G ++ N L++ C++ + ++ + + +LG DV +Y I
Sbjct: 128 ELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 187
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ ++ G +A LL + E G P + Y+ +I G F+ G + A F E+
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQ 247
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PP+ Y++++ + +A +L +M G+ P + ++ + G + G+
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 204 AEKI 207
A ++
Sbjct: 308 AVRV 311
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 62/128 (48%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++++GL + A + ++ ++ T N++I + ++ VE +++ S+ +
Sbjct: 643 NIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISR 702
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY I+I + K G+++EA + ++ G P L +++ ++ +
Sbjct: 703 SGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVR 762
Query: 134 AFCFFSEI 141
A + S+I
Sbjct: 763 AGAYLSKI 770
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S G V G +V GL G + A+ ++ M + G PD+ T++SL+ +CK+G++
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKI 344
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN-----PFPS 116
E VE + G + TY L+ + G + EA R++ + G P S
Sbjct: 345 EEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVS 404
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +I G + G+ DDA FF ++ +G P+ Y+T++ R GR ++A L E+
Sbjct: 405 TYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V V GL +G + A Q++ +M DP++ T+N++++ +CKSG+
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK 272
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ +EM + C +V Y ++ + K G EA ++ + G P Y+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + G+ ++A E+ ++G PN Y +L+ GR EA + EM+
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392
Query: 180 GLT-----PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G P ++ + GL G+ D A K Q
Sbjct: 393 GGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P +V L + L A +++ +MI+ G P L TFN+LI C+ +E
Sbjct: 111 RGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G ADV TY L+ + KAG + EA +LL + G P Y+ +
Sbjct: 171 ADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE---MG 180
G + G+ DA +++ H PN Y T++ + G+ A + +M G
Sbjct: 231 GLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L + + V DGL G+ A +
Sbjct: 291 LNVVG--YSTVVDGLCKLGRTQEARSV 315
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG +E +++++ ++I +G PD + ++ ++CKS + +E+ + + G
Sbjct: 88 LLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAG 147
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
C + T+ LI + ++ A LL + G Y ++ G + G+ +A
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+K G P+ Y++ + + G+ ++A L +M + P ++ + DGL
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGL 267
Query: 196 KNCGKHDLA-EKIEQLEVS 213
GK D A E +EQ+ S
Sbjct: 268 CKSGKIDTALEMMEQMASS 286
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
M+ G P V LV GL AG +E A + V +M +G P+ T+ SL+ +C G
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378
Query: 60 --EVEFCVE-MYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
E E VE M C VSTY LI + KAG ID+A + + G +P
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y+ I++G R G+ A SE++
Sbjct: 439 VSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + LV G G ++++ M + P++ ++N L+E +CK
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 61 VEFCVEMYYSVCKLG--SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
E+ + G S D+ TY L+ KAG ++E+ LL ++ G P +Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + + +A E+ G P + TLI+ C R A + L +M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEK-IEQLEVS 213
G+ ++ + DGL G+ AE+ +E+++ S
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + LV L + +E A ++ +KM K DPD++++ L+E +
Sbjct: 180 MEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQN 239
Query: 61 V----EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ E C EM +L DV Y I++ A KA DEA L H + G P P
Sbjct: 240 LIKVNEVCREMEDKGFQL----DVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPH 295
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+Y +I G + D+A FF K G P P Y ++ R +A + EM
Sbjct: 296 VYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEM 355
Query: 177 TEMGLTPISRCFDLVTDGL 195
+ G+ P SR FD+V L
Sbjct: 356 KKCGIGPNSRTFDIVLHHL 374
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ GL + L+ A + G P+ T+N+++ C S
Sbjct: 285 MKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLR 344
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA---FRLLHNLVEDGHNPFPSL 117
++ M + K G + T+ I++ + K I+EA FR + N E G P S
Sbjct: 345 MDDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRM-NGGEFGCEPSVST 403
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +++ D A + E+K KG P +++TL+ + EA Y EM
Sbjct: 404 YEIMVRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEML 463
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLA 204
++G+ P ++ F + + L + G +A
Sbjct: 464 DVGIRPPAKMFSTLKEALVDAGMEHVA 490
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L + G P Y
Sbjct: 257 VDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ + G + A+ + + + K G P + +FN+L+ K G+++
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++++G P + +I G
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + EM+ GL P
Sbjct: 251 HCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPD 310
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ + DG +C + DL E
Sbjct: 311 KITYTTLIDG--SCKEGDLETAFE 332
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YVP 414
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ + ++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T +IE + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + G P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V LV GL N+G A ++ M+K+ PD+ TFN+LI+ K G+
Sbjct: 202 MENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGK 261
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y + ++ ++ TY LI + G +DEA ++ + + G P Y
Sbjct: 262 LLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTS 321
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA F E+ KG N YTTLI G G+ A M G
Sbjct: 322 LINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRG 381
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P R ++++ L GK + A I
Sbjct: 382 VPPNIRTYNVLLHCLCYNGKVNKALMI 408
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + L+ G +E A MVN+M++ G PD+ + ++I+++CK+G V+
Sbjct: 136 GFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNA 195
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G DV Y L+ + +G +A LL +++ P + +I
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDA 255
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ DA ++E+ PN YT+LI GR EA M G P
Sbjct: 256 FVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPD 315
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + +G C K + A KI
Sbjct: 316 VVAYTSLINGFCKCKKVEDAMKI 338
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ L G++++A + N+M G PD+ + SL+ +C SG
Sbjct: 167 MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR 226
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K DV T+ LI A K G + +A L + +++ P Y
Sbjct: 227 WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A F ++ KG P+ YT+LI + + +A EM++ G
Sbjct: 287 LINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
LT + + + G GK ++A+++
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEV 373
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + K++K G +PD+ TF SLI C +E + M + ++G DV Y +I
Sbjct: 125 ASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIID 184
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
++ K G +D A L + + G P +Y ++ G G++ DA + + P
Sbjct: 185 SLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKP 244
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + LI + G+ ++A EM +M + P + + +GL G+ D A ++
Sbjct: 245 DVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V + L+ + G L AK++ N+MI+ P++ T+ SLI +C G
Sbjct: 237 MMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGR 296
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+Y + G DV Y LI K +++A ++ + + + G Y
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
+I+G G+ + A F + +G PPN Y L+ G+ +A +M +
Sbjct: 357 LIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKRE 416
Query: 180 --GLTPISRCFDLVTDGLKNCGKHDLA 204
G+ P R ++++ GL GK + A
Sbjct: 417 IDGVPPNIRTYNVLLHGLCYNGKLEKA 443
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG L+QG G A+++ M+ +G P++ T+N L+ +C +G+
Sbjct: 342 MSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGK 401
Query: 61 VEFCVEMYYSVCKL---GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
V + ++ + K G ++ TY +L+ + G +++A + ++ + +
Sbjct: 402 VNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIIT 461
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y II+G + G+ DA F + KG PN YTT+I+ R G +EA +M
Sbjct: 462 YTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521
Query: 178 EMGLT 182
E G++
Sbjct: 522 EDGVS 526
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G DL T N L+ C+S + + KLG D+ T+ LI I+EA
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+++ +VE G P +Y II + G D+A F++++ G P+ +YT+L+
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
GR+ +A L M + + P F+ + D GK
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGK 261
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 83/193 (43%), Gaps = 1/193 (0%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R++L GL + + E A + + M++ P + F L+ I K + + + + +
Sbjct: 40 REILRNGLHSLQFNE-ALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+G D+ T +L+ ++ A L L++ G P + +I G + +
Sbjct: 99 IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+A +++ G P+ +YTT+I + G A + +M G+ P + +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218
Query: 193 DGLKNCGKHDLAE 205
+GL N G+ A+
Sbjct: 219 NGLCNSGRWRDAD 231
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ KG PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQV 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 378
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YMP 414
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++MI +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 77/192 (40%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +++GL + E A++++ +M+ PD TFN++I ++C+ G V+
Sbjct: 367 GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRA 426
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G D+ TY +I + ID+A LL NL G P + ++KG
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+++DA + PP+ + T+IT + G ++A L M E G P
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPN 546
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+++V D L GK A K+
Sbjct: 547 QSTYNIVVDALLKAGKTQEALKL 569
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G NP + + ++ GL N ++ A ++++ + G PD+ TFN+L++ +C
Sbjct: 433 MSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDR 492
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
E V M +S C D +T+ +I ++ + G++ +A L + E+G P S
Sbjct: 493 WEDAEQLMVNMMHSDCP----PDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQS 548
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y ++ + G+ +A S + P+ Y T+I+ + G+ EA + L M
Sbjct: 549 TYNIVVDALLKAGKTQEALKLLS--GMTNGTPDLITYNTVISNITKAGKMEEALDLLRVM 606
Query: 177 TEMGLTP 183
GL+P
Sbjct: 607 VSNGLSP 613
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P + ++ GL + G ++ A ++++++ G PD + ++++ +C +
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + D T+ +I ++ + G++D A +++ + E+G NP Y
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G DDA S ++ G P+ + TL+ R+ +A ++ M
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P + F+ V L C K L + IE L++
Sbjct: 508 CPPDATTFNTVITSL--CQKGLLLQAIETLKI 537
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++L+ + N G ++ A +++ + G PD T+ +++++C S
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + D T+ ++ ++ + G++D A +++ ++ E G P Y+
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G G+ DDA S +K G P+ YTT++ ++ A + EM
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK-IEQL 210
P F+ V L G D A K +EQ+
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQM 433
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
FNP L++ L G + A + + M+ +G P + T++ L++ CK+ +
Sbjct: 165 FNP-------LIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + G D+ TY +LI A+ G +DEA +L +L G P Y P++K
Sbjct: 218 VLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSL 277
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
++ + F+E+ P+ + T++T + G A + M+E G P
Sbjct: 278 CGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDI 337
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
+ + DGL + G+ D A ++
Sbjct: 338 VTYSSILDGLCDVGRVDDAVEL 359
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L + + +++ +M PD TFN+++ ++C+ G V+ +++ + + G
Sbjct: 273 VLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG 332
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ TY ++ + G +D+A LL L G P Y ++KG Q++ A
Sbjct: 333 CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+E+ PP+ + T+I + G A + +M+E G P ++ + DGL
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452
Query: 196 KN 197
N
Sbjct: 453 CN 454
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 85/204 (41%), Gaps = 5/204 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G + V + +V G AG +E A+++++ M PD TFN LI +C G V
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDA 181
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G V TY IL+ A KA +A LL + G P Y +I
Sbjct: 182 LAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYT-TLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G D+A S++ G P+ YT L ++CG R+ E EM P
Sbjct: 242 MCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCG-SERWKEVEELFAEMASNKCAP 300
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
F+ + L G D A K+
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKV 324
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P +++V LL AG + A ++++ M PDL T+N++I I K+G+
Sbjct: 538 MAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN--GTPDLITYNTVISNITKAGK 595
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G D TY+ L + + D A R+L L + G +P + Y
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYND 655
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + + D A F+ + G P+ Y L+ EA L+ + +G
Sbjct: 656 ILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLG 715
Query: 181 L 181
+
Sbjct: 716 V 716
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L G ++ A ++V +M + G +PD+ T+NS+I+ +C ++ +E+ ++ G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ T+ L+ + ++A +L+ N++ P + + +I ++G A
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ G PN+ Y ++ + G+ EA L MT TP ++ V +
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNI 590
Query: 196 KNCGKHDLAEKIEQLEVS 213
GK + A + ++ VS
Sbjct: 591 TKAGKMEEALDLLRVMVS 608
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 36/246 (14%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L++GL + E A+Q++ M+ PD TFN++I ++C+ G +
Sbjct: 472 GCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQA 531
Query: 65 VEMYYSVCKLGSCADVSTYKILIPA---------------------------------VS 91
+E + + G + STY I++ A ++
Sbjct: 532 IETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNIT 591
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
KAG ++EA LL +V +G +P Y + G R D A ++ G P+
Sbjct: 592 KAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDAT 651
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
Y ++ + R A + M G P + ++ + L L ++ +QL
Sbjct: 652 FYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL---AYECLLDEAKQLL 708
Query: 212 VSLRSV 217
V+L S+
Sbjct: 709 VNLCSL 714
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
Query: 49 NSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
N LI+ +C G V ++ + LG+ A V TY ++ +AG I++A RL+ +
Sbjct: 102 NILIKRLCSGGRVADAERVFAT---LGASATVVTYNTMVNGYCRAGRIEDARRLISGM-- 156
Query: 109 DGHNPFPS---LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
PFP + P+I+ RG+ DA F ++ +G P+ Y+ L+ +
Sbjct: 157 ----PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASG 212
Query: 166 FVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ +A L EM G P ++++ + + N G D A I
Sbjct: 213 YRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNI 254
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 9/215 (4%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S K PV ++L++ L + G + A+++ + G+ + T+N+++ C++G +
Sbjct: 90 SGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRI 146
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
E + + + D T+ LI A+ G + +A + +++ G +P Y+ +
Sbjct: 147 E---DARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSIL 203
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + + A E++ KG P+ Y LI G EA N L ++ G
Sbjct: 204 LDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGC 263
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P + + V L CG E +E+L + S
Sbjct: 264 KPDAVTYTPVLKSL--CGSERWKE-VEELFAEMAS 295
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + +++V G+ G ++ A + + + G +P+ ++N +++ +C +
Sbjct: 93 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + G +V T+ +LI + + G+++ A +L + + G P Y P
Sbjct: 153 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 212
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + D A F + +G P+ Y TL+T R G A L ++ + G
Sbjct: 213 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P+ ++ V DGL GK
Sbjct: 273 CAPVLISYNTVIDGLTKAGK 292
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +++++GL A E A++++ +M ++G P++ TFN LI +C+ G VE
Sbjct: 132 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 191
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + K G + +Y L+ A K +D+A L +V G P Y ++
Sbjct: 192 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ D A ++K KG P Y T+I + G+ EA L EM GL P
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311
Query: 185 SRCFDLVTDGL 195
+ + GL
Sbjct: 312 IITYSTIAAGL 322
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ L G +E A +++ ++ K G P+ ++N L+ CK +
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 222
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ +Y L+ A+ ++G +D A LLH L + G P Y
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A +E+ KG P+ Y+T+ R R +A ++ +MG
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 342
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + ++ + GL C + + I+
Sbjct: 343 IRPNTVLYNAIILGL--CKRRETHSAID 368
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ ++ A ++ M+ +G PD+ ++N+L+ +C+SGEV+
Sbjct: 202 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 261
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + + G + +Y +I ++KAG EA LL+ +V G P Y+ I G
Sbjct: 262 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 321
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R + +DA F +++ G PN +Y +I + A + M G P
Sbjct: 322 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 381
Query: 185 SRCFDLVTDGL 195
+ ++ +GL
Sbjct: 382 ESTYTILIEGL 392
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + L++GL G +A ++++M+++ PD+ T+ L+E CK + +++
Sbjct: 30 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D+ TY +++ + + G +D+A L NL G P Y ++KG
Sbjct: 90 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 149
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+++DA E+ KG PPN + LI+ R G A L ++ + G TP S
Sbjct: 150 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 209
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + K D A L VS
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVS 235
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V G AG L++A+++V +M +PD T+N+LI +C G + + + +
Sbjct: 6 MVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 62
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY IL+ A K +A +LL + + G P Y ++ G + G+ DDA
Sbjct: 63 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 122
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + G PN Y ++ R+ +A + EM + G P F+++ L
Sbjct: 123 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 182
Query: 196 KNCGKHDLAEKIEQLE 211
C K + +E LE
Sbjct: 183 --CRKGLVEPALEVLE 196
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L +G ++ A ++++++ +G P L ++N++I+ + K+G+
Sbjct: 233 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G D+ TY + + + I++A R + + G P LY
Sbjct: 293 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 352
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
II G +R + A F+ + G PN YT LI G EA + L E+
Sbjct: 353 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 805
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--------PDLETFNSLI 52
M K NP V ++LV L G ++ AK ++ KM+ + + P+ ++N+LI
Sbjct: 378 MVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLI 437
Query: 53 ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN 112
+ CKSG + ++ + G +V TY L+ A+ K +D+A L++N + G
Sbjct: 438 DGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQ 497
Query: 113 PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAA 170
P Y ++ G ++G+ DA F ++ IKG+ N P +T I + G G EA
Sbjct: 498 PDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGY--NLPTWTYNIMINGLCLEGLLDEAE 555
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
L +M + G P + + L ++D AEK+
Sbjct: 556 TLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKL 592
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V + L+ L +++ A +VN QG PD+ T+N+L++ +CK G
Sbjct: 456 MRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGR 515
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G TY I+I + G++DEA LL + ++G P Y
Sbjct: 516 LKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQT 575
Query: 121 IIKGAFRRGQFDDAFCFFSEIKI---KGHPPNRPVYTTLITMCGRGGRF 166
II F + + D A E+ + + P + L T+ RG R
Sbjct: 576 IIHALFEKDENDKAEKLVRELIVRVFRKSPTDIRDGRYLTTLTQRGKRI 624
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE----FCVEMYYSVCKLGS---CA-DV 80
A + ++M+ + +P++ TFN L++ +CK G+++ ++M L + C +
Sbjct: 371 AFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNT 430
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
+Y LI K+G + A++LL + + G P Y ++ + D A +
Sbjct: 431 VSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNN 490
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
K +G P+ Y TL+ + GR +A ++ G + ++++ +GL G
Sbjct: 491 FKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGL 550
Query: 201 HDLAEKI 207
D AE +
Sbjct: 551 LDEAETL 557
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 29/199 (14%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
K G +P+ T +LI+ +C +G+V + + V LG + TY ILI + K G
Sbjct: 254 KMGYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTR 313
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP--------- 148
A ++L + N +Y+ +I G + DA+ +SE+ +K PP
Sbjct: 314 AALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTFKAFS 373
Query: 149 ----------NRPVYT--TLITMCGRGGRFVEAANYLMEM--------TEMGLTPISRCF 188
N VYT L+ + G+ EA N +++M TEM P + +
Sbjct: 374 LFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSY 433
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ + DG G+ A K+
Sbjct: 434 NTLIDGFCKSGRLSHAWKL 452
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
S G V G +V GL G + A+ ++ M + G PD+ T++SL+ +CK+G++
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKI 344
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-----VEDGHNPFPS 116
E VE + G + TY L+ + G + EA R++ + D P S
Sbjct: 345 EEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVS 404
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
Y +I G + G+ DDA FF ++ +G P+ Y+T++ R GR ++A
Sbjct: 405 TYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V V GL +G + +A Q++ +M DP++ T+N++++ +CKSG+
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK 272
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ +EM + C +V Y ++ + K G EA ++ + G P Y+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + G+ ++A E+ ++G PN Y +L+ GR EA + EM+
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392
Query: 180 GLT-----PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G P ++ + GL G+ D A K Q
Sbjct: 393 GGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G V + L+ GL AG L+ A+Q++ +M G PD+ ++S + +CKSG+
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFPSLYA 119
V ++ + +V TY ++ + K+G ID A ++ + DG Y+
Sbjct: 238 VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G + G+ +A + G P+ Y++L+ + G+ EA + EM
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + + + GL +CG+ AE++
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERM 385
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
MI+ G P L TFN+LI C+ +E + ++ G ADV TY L+ + KAG
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGR 202
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+ EA +LL + G P Y+ + G + G+ +A +++ H PN Y T
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNT 262
Query: 156 LITMCGRGGRFVEAANYLMEMTE---MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ + G+ A + +M GL + + V DGL G+ A +
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG--YSTVVDGLCKLGRTQEARSV 315
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 38/251 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG--SDPDLETFNSLIETICKS 58
M+ +G P V + L++GL A+++V MI +G S PDL T+++L+ CK+
Sbjct: 36 MAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKA 95
Query: 59 GEVEFCVE---------------MYY----SVCK----------------LGSCADVSTY 83
G+VE E MY S+CK G C + T+
Sbjct: 96 GKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITF 155
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI + ++ A LL + G Y ++ G + G+ +A +K
Sbjct: 156 NTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G P+ Y++ + + G+ + A L +M + P ++ + DGL GK D
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDT 275
Query: 204 A-EKIEQLEVS 213
A E +EQ+ S
Sbjct: 276 ALEMMEQMASS 286
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + LV G G ++++ M +G P++ ++N L+E +CK
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 61 VEFCVEMYYSVCKLG--SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
E+ + G S D+ TY L+ KAG ++E+ LL ++ G P +Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + + +A E+ G P + TLI+ C R A + L M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEK-IEQLEVS 213
G+ ++ + DGL G+ AE+ +E+++ S
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +GF P + + GL+N ++ A ++ + G PD+ FN LI +CK
Sbjct: 557 MTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNR 616
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++++ + K G V TY + I K G +D+A L + ++ P Y
Sbjct: 617 FTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTT 676
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + DDA F E++ G PPN+ + LI + R EA YL EM +
Sbjct: 677 LVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKCCRPTEALCYLREMQQKE 736
Query: 181 LTPIS 185
+ P S
Sbjct: 737 MKPDS 741
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V ++L++GL A+ + ++++K+G P + T+N I+ CK+G V+
Sbjct: 596 GHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKA 655
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + K V TY L+ K D+A L + ++G P + +I G
Sbjct: 656 MAHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYG 715
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL--T 182
+ + +A C+ E++ K P+ +Y L++ A EM ++G
Sbjct: 716 LCKCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFPK 775
Query: 183 PISRCFDLVTDGLKNCGKHD 202
P+ + + V D + K D
Sbjct: 776 PLDKNYPTVVDAILKFCKDD 795
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + L+ L + LE + +++ +M + G +P T+NS+ +CK +V M
Sbjct: 459 PTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVM 518
Query: 68 YYSVCKLGSCAD---VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++GSC + +L+ + G + EA L N+ + G P Y+ I G
Sbjct: 519 ---LKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGG 575
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D A F ++ GH P+ + LI + RF EA + E+ + GL+P
Sbjct: 576 LVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPS 635
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
++L D G D A
Sbjct: 636 VVTYNLFIDCWCKNGNVDKA 655
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 84/193 (43%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++Q + E+ + K +K+ P++ +F+ +I+ K+ +++ + ++ + +
Sbjct: 396 MMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSIVIDGFLKNDQLDLALSLFNDMRRF 455
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+ Y LI ++ K+ +++++ LL + E G P Y I +R A
Sbjct: 456 VDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAA 515
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ GH P T L+ GR +EA +L MT+ G P + G
Sbjct: 516 CVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGG 575
Query: 195 LKNCGKHDLAEKI 207
L N + D A KI
Sbjct: 576 LVNIQEVDHAMKI 588
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 69/164 (42%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
M+ +M G P ++ L++ +C G V E ++ + G D+ +Y I +
Sbjct: 518 MLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLV 577
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+D A ++ +L GH P + +I+G + +F +A F E+ +G P+
Sbjct: 578 NIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVV 637
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
Y I + G +A +L MT+ P + + DG
Sbjct: 638 TYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGF 681
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 99/246 (40%), Gaps = 58/246 (23%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L+ G + ++ A Q+ +KM ++ S PD+ ++ LI +CK+ + + + ++ + +
Sbjct: 270 VLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSEMKE 329
Query: 74 LGSCADVSTYKILIPAVSKA-----------------------------------GMIDE 98
G D+ LI S + G++DE
Sbjct: 330 FGVRPDIGILTKLISCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDGLMDE 389
Query: 99 AFRLLHNLVEDGHNP------------------FPSL--YAPIIKGAFRRGQFDDAFCFF 138
A+RL+ +++ + FP++ ++ +I G + Q D A F
Sbjct: 390 AYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSIVIDGFLKNDQLDLALSLF 449
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
++++ P +Y LI + R ++ L EM E+G+ P ++ + L C
Sbjct: 450 NDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCL--C 507
Query: 199 GKHDLA 204
+ D++
Sbjct: 508 KRKDVS 513
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 3/185 (1%)
Query: 1 MSDKG-FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
MS KG F P + L++ + G ++ + +N+M G + D T +I T C +
Sbjct: 151 MSRKGLFVPDRYSHNTLLEVISKCGLVDLMEMRLNEMKGFGWEFDKYTLTPVIVTYCNAQ 210
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ + +Y + + G D ++ SK G +D+AF L+ + E G +
Sbjct: 211 RFDQALSVYKEMEEKG-WVDERVCSMMALCFSKLGEVDKAFELVERMGECGMRLSEKTFC 269
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + + D A F +++ + P+ +Y LI + A + EM E
Sbjct: 270 VLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSEMKE 329
Query: 179 MGLTP 183
G+ P
Sbjct: 330 FGVRP 334
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 57 KSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFP 115
K GEV+ E+ + + G T+ +LI K +D+A +L + ED P
Sbjct: 242 KLGEVDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDV 301
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
SLY +I G + D A FSE+K G P+ + T LI+
Sbjct: 302 SLYDVLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLIS 344
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ A L+S+ ++ N M G +PD T+ +LI+ K+G
Sbjct: 93 MIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGF 152
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++Y + G D TY I+I + KAG ++ A++L + + G+ P Y
Sbjct: 153 HDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNI 212
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+FD A +S+++ G+ P+R Y ++ + G G +A EM G
Sbjct: 213 IIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAG 272
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ F L+ D GK AEK Q
Sbjct: 273 WVADNPIFGLMVD---MWGKTGNAEKAAQW 299
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF V ++ L A + ++++MI++G +P++ T+N LI ++ +++
Sbjct: 62 GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + +G D TY LI +KAG D A L + G P Y+ II
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHC 181
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ + A+ F E+ +G+ P+ Y +I + + G+F A ++ E+G P
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPD 241
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI-EQLE 211
+ ++ + L NCG + AE++ E++E
Sbjct: 242 RVTYGIIMEVLGNCGHIEDAEQVFEEME 269
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
AG+ ++A + +M G PD T++ +I + K+G++ +++ + G + T
Sbjct: 150 AGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVT 209
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y I+I +KAG D A +L +L E G+ P Y I++ G +DA F E++
Sbjct: 210 YNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEME 269
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLVTDGLKN 197
G + P++ ++ M G+ G +AA + M + GL P + C L++ L++
Sbjct: 270 RAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRS 325
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 73/160 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+D+G+ P + ++++ AG + A ++ + + + G PD T+ ++E + G
Sbjct: 198 MTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGH 257
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + + G AD + +++ K G ++A + + +++ G P
Sbjct: 258 IEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNS 317
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
++ R +D A + G P YT+L++ C
Sbjct: 318 LLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSC 357
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 6/175 (3%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
P+ G L+V G E A Q N+M+ G P++ NSL+ +S + +
Sbjct: 278 PIFG--LMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVL 335
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ K G + TY L+ + + E L + GH P + + + G
Sbjct: 336 GGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGHPAHPFVCSLLASGEMVV 395
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G CFF ++ + R +LI R G+ V A + E L P
Sbjct: 396 G----IRCFFDAMQFEELESRRGFADSLIDFLHRAGKAVAAGSVWEVAAEKNLYP 446
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVJEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ + G + A+ + + + K G P + +FN+L+ K G+++
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G DV TY +LI + K +D+A L ++++G P + +I G
Sbjct: 191 FRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + EM+ GL P
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310
Query: 185 SRCFDLVTDG 194
+ + DG
Sbjct: 311 KITYTTLIDG 320
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YVP 414
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ + ++M +G PD T+ +LI+ CK G
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGH 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + +++V G+ G ++ A + + + G +P+ ++N +++ +C +
Sbjct: 221 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + G +V T+ +LI + + G+++ A +L + + G +P Y P
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + D A F + +G P+ Y TL+T R G A L ++ + G
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P+ ++ V DGL GK
Sbjct: 401 CAPVLISYNTVIDGLTKAGK 420
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +++++GL A E A++++ +M ++G P++ TFN LI +C+ G VE
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 319
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + K G + +Y L+ A K +D+A L +V G P Y ++
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ D A ++K KG P Y T+I + G+ EA L EM GL P
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 439
Query: 185 SRCFDLVTDGL 195
+ + GL
Sbjct: 440 IITYSTIAAGL 450
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ L G +E A +++ ++ K G P+ ++N L+ CK +
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKK 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ +Y L+ A+ ++G +D A LLH L + G P Y
Sbjct: 351 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 410
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A +E+ KG P+ Y+T+ R R +A ++ +MG
Sbjct: 411 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 470
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + ++ + GL C + + I+
Sbjct: 471 IRPNTVLYNAIILGL--CKRRETHSAID 496
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + L+ ++ A ++ M+ +G PD+ ++N+L+ +C+SGEV+
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + + G + +Y +I ++KAG EA LL+ +V G P Y+ I G
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R + +DA F +++ G PN +Y +I + A + M G P
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509
Query: 185 SRCFDLVTDGL 195
+ ++ +GL
Sbjct: 510 ESTYTILIEGL 520
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D L++GL G +A ++++M+++ PD+ T+ L+E CK + +++ +
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY +++ + + G +D+A L NL G P Y ++KG +++D
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+ KG PPN + LI+ R G A L ++ + G +P S ++ +
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343
Query: 194 GLKNCGKHDLAEKIEQLEVS 213
K D A L VS
Sbjct: 344 AFCKQKKMDKAMAFLDLMVS 363
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L +G ++ A ++++++ +G P L ++N++I+ + K+G+
Sbjct: 361 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G D+ TY + + + I++A R + + G P LY
Sbjct: 421 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G +R + A F+ + G PN YT LI G EA + L E+ G
Sbjct: 481 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ G AG +++A++ ++ + D T ++LI +C G + +
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + DV TY IL+ A K +A +LL + + G P Y ++ G +
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DDA F + G PN Y ++ R+ +A + EM + G P
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLE 211
F+++ L C K + +E LE
Sbjct: 303 FNMLISFL--CRKGLVEPALEVLE 324
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + ++ ++G A Q++ MI++ +PD+ TF++LI K +
Sbjct: 81 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 140
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+Y + + TY +I K +D+A R+L ++ G +P ++
Sbjct: 141 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 200
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+ F E+ +G N YTTLI + G A + L EM G
Sbjct: 201 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 260
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P F + GL C K +L + LE
Sbjct: 261 VAPDYITFHCMLAGL--CSKKELRKAFAILE 289
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ G ++ AK+M++ M +G PD+ TF++LI CK+ V+ +E+
Sbjct: 158 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 217
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G A+ TY LI + G +D A LL+ ++ G P + ++ G
Sbjct: 218 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 277
Query: 128 RGQFDDAFCFFSEIK 142
+ + AF +++
Sbjct: 278 KKELRKAFAILEDLQ 292
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 10/204 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDP----------DLETFNS 50
M + G P V + L+ L G + A +V++M+++G P D+ +
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 51 LIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
+++ +CK G ++ + + G +V TY +I + +G +A +LL +++E
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 111 HNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
NP ++ +I + + +A + E+ P Y ++I + R +A
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180
Query: 171 NYLMEMTEMGLTPISRCFDLVTDG 194
L M G +P F + +G
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLING 204
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KGF + G ++L++ L G + A M+ +M +G PD+ TFN+LI +CK
Sbjct: 441 MSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDR 500
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + +Y + G A+ TY LI A + G I EA +L+++++ G Y
Sbjct: 501 KEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNG 560
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + G + A F E+ K P+ LI R G+ A L +M G
Sbjct: 561 LIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620
Query: 181 LTPISRCFDLVTDGLKNCG 199
L P ++ + +GL G
Sbjct: 621 LAPDVVTYNSLINGLCKMG 639
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G ++ A ++VN M+ +G D T+N LI+ CK G E + ++ + +
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ +LI + + G + A LL +++ G P Y +I G + G +AF
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS-RCFDLVTDG 194
F++++ +G P+ Y TLI R G F +A L+ E P + LV++
Sbjct: 646 NLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705
Query: 195 LKNCGKHD 202
+K GK +
Sbjct: 706 IKEIGKEN 713
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ GL G + SA MVN M G P+L T+ +L++ CK +
Sbjct: 371 MIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQ 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G ++ Y +L+ A+ K G + +A +L + + G P +
Sbjct: 431 LEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNT 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +DA + ++ + G N Y TLI RGG EA + +M G
Sbjct: 491 LIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P + L+ G LE A ++N+M +G + ++ +N L+ +CK+G+
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++M + G D+ T+ LI + K ++A L +++ DG Y
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G +A +++ +G P + Y LI + G +A EM
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + +L+ +GL GK
Sbjct: 586 LVPSNISCNLLINGLCRVGK 605
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 15 LLVQGLLNAGYLESAKQ-MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L+ G + +G L+ A + +KMIK G PD+ TFN+LI +CK G + V+M +
Sbjct: 349 ILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSA 408
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G ++ TY L+ K ++EA +L+ + G Y +++ + G+
Sbjct: 409 NGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPK 468
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLI 157
A E+ KG P+ + TLI
Sbjct: 469 ALDMLGEMSDKGCKPDIFTFNTLI 492
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P +LL+ GL G + +A +++ MI +G PD+ T+NSLI +CK G
Sbjct: 581 MVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGN 640
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
+ ++ + G D TY LI +AGM D+A+ LL VE+ P
Sbjct: 641 IREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIP 693
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++++ L +++A ++ M K G P+ + +LI + K
Sbjct: 199 MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDR 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + +G DV T+ +I + + I E +L+ ++ G P Y
Sbjct: 259 VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGV 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEM 179
++ G R G+ D+A +++ PN +T LI + GR EA +L + M +
Sbjct: 319 LMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKN 374
Query: 180 GLTPISRCFDLVTDGL 195
G P F+ + GL
Sbjct: 375 GCRPDVFTFNTLIHGL 390
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++++ L++A A + +M+ +G P + TF +++ +C EV+ +
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G + Y+ LI A+SK ++EA +LL + G P + +I G R
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ + + +G PN Y L+ R G+ EA L ++ TP
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVH 346
Query: 188 FDLVTDGLKNCGKHDLAE 205
F ++ +G G+ D A
Sbjct: 347 FTILINGYVKSGRLDEAN 364
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ GL + ++V++M+ +G P+ T+ L+ +C+ G+V+ E
Sbjct: 276 PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVD---EA 332
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN-LVEDGHNPFPSLYAPIIKGAF 126
+ K+ + DV + ILI K+G +DEA L++ ++++G P + +I G
Sbjct: 333 QVLLNKVPTPNDVH-FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC 391
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
++G A +++ G PN YTTL+ + + EA L EM+ G
Sbjct: 392 KKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGF 446
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 73/164 (44%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
+P +++N +++ + + ++Y + G V T+ +++ A+ +D A
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
LL ++ + G P +Y +I +R + ++A E+ + G P+ + +I
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
R R E A + M G TP + ++ +GL GK D A+
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQ 333
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + L+ A + A +++ +M + G P + T+NSLI + K G
Sbjct: 269 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + G DV TY LI + +AG ID A +V +G P Y
Sbjct: 329 LEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNA 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK RG+F + F E++ G P+ + TL+ + G+ G E + EM + G
Sbjct: 389 LIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAG 448
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + CG DLA +I
Sbjct: 449 YIPERDTYVSLISSYSRCGLFDLAMQI 475
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ + A Q+ ++M G +PD TFNSL++ K+
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + ++G V TY LI + K G++++A L + G P Y
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTT 353
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ D A + E+ G PN Y LI M G G+F E E+ G
Sbjct: 354 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAG 413
Query: 181 LTPISRCFDLVT 192
P D+VT
Sbjct: 414 FVP-----DIVT 420
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ GL AG +++A ++M++ G P+L T+N+LI+ G+
Sbjct: 339 MEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGK 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G D+ T+ L+ + G+ E + + + G+ P Y
Sbjct: 399 FPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVS 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G FD A + + G P+ Y +++ RGGR+ +A EM E
Sbjct: 459 LISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERD 518
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
P + + N + D
Sbjct: 519 CKPDEYSYSSLLHAYANAKRLD 540
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 1/203 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG-EV 61
D P LV AG A + +M+ G P + T+N ++ K
Sbjct: 165 DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPW 224
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ VE+ S+ + G D TY LI + + EA ++ + G P + +
Sbjct: 225 KEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 284
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + + D+A E++ G PP+ Y +LI+ + G +A EM G+
Sbjct: 285 LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGI 344
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P + + GL GK D A
Sbjct: 345 KPDVVTYTTLISGLDRAGKIDAA 367
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGY-LESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M D G P + ++++ + ++V M + G PD T+N+LI +
Sbjct: 198 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 257
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ +++ + G D T+ L+ KA DEA ++ + G P Y
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G + A E+++KG P+ YTTLI+ R G+ A EM
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377
Query: 180 GLTP 183
G P
Sbjct: 378 GCKP 381
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG-QFDDAFCF 137
D Y L+ A S+AG +A + +V+ G P Y ++ + + +
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 230
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
+ +K G P+R Y TLI+ C R + EAA EM G P F+ + D
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 198 CGKHDLA-EKIEQLE 211
+HD A E I+++E
Sbjct: 291 ARRHDEAIEVIQEME 305
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 9/213 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ GF P + + L+ G + +M K G P+ +T+ SLI + + G
Sbjct: 409 LRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++Y + + G DVSTY ++ A+++ G ++A +L + E P Y+
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + D +I + P+ + TL+ + + EA +E+ +
Sbjct: 529 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQ-- 586
Query: 181 LTPISRC---FDLVTDGLKNCGKHDLAEKIEQL 210
RC +++ + GK+ + K+E++
Sbjct: 587 ----KRCSLDINVLNAMVSIYGKNRMVRKVEKI 615
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + N + L+ G E + ++ ++ G PD ++N++I + G+
Sbjct: 619 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 678
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G DV TY I + + M +EA L+ +V G P Y
Sbjct: 679 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP 147
I++G R G+ DA F S + + HP
Sbjct: 739 IVEGYCRNGKLTDAKIFVSNLP-QLHP 764
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T+NSL+ + G+ E C + + G D +Y +I A + G + EA RL +
Sbjct: 630 TYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 689
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G P Y +K F++A + +G PN Y +++ R G+
Sbjct: 690 KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Query: 167 VEAANYLMEMTEM 179
+A ++ + ++
Sbjct: 750 TDAKIFVSNLPQL 762
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 6/205 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLL----NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC 56
+SD ++ + + LV+ L+ L A++ ++ ++ D+ N+++
Sbjct: 545 LSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYG 604
Query: 57 KSGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
K+ V VE S+ K + +TY L+ S+ G ++ +L + G P
Sbjct: 605 KNRMVR-KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDR 663
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y +I R+GQ +A FSE+K G P+ Y + F EA +
Sbjct: 664 YSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRY 723
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGK 200
M G P R ++ + +G GK
Sbjct: 724 MVTQGCKPNERTYNSIVEGYCRNGK 748
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P L+ G + A Q+ +M++ G PD+ T+N+++ + + G
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + D +Y L+ A + A +D+ L ++ + P L
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMTE 178
++ + +A F E++ K + V ++++ G R R VE LM+ +
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 623
Query: 179 MGLT 182
+ L+
Sbjct: 624 INLS 627
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +V GL G ++ A +MV +M +G +PD TF++LI C + +V+
Sbjct: 108 GIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 167
Query: 65 VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPI 121
+++Y + S DV TY LI K+G +++A ++L V +G P++ Y+ +
Sbjct: 168 LKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG--VMEGRKCVPNVVTYSSL 225
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLM-EMTEM 179
+ G + G D A F + KG PN YTTLI +C V+AA LM EMT
Sbjct: 226 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLC--AAHKVDAARLLMDEMTAT 283
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + ++ + DG G+ + A+++
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQL 311
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 36/243 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ + P V L+ G +G LE A +M+ M + P++ T++SL+ +CK+G+
Sbjct: 175 LTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 234
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + G +V TY LI + A +D A L+ + P Y
Sbjct: 235 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNA 294
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI--------------------TMC 160
++ G R G+ ++A F E+ K P+R YT L+ T
Sbjct: 295 LLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 354
Query: 161 G----------------RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G R RFVEAA ++ EM + P + + + DGL G+ D A
Sbjct: 355 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHA 414
Query: 205 EKI 207
++
Sbjct: 415 MEV 417
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V ++V G A A + + +MI + P+ T++SLI+ +CK+G V+
Sbjct: 355 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHA 414
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ ++ V T+ +I A+ + G +DEA++LL + G P Y +++G
Sbjct: 415 MEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG 474
Query: 125 AFRRGQFDDAFCFFSEIK 142
R G+ + A+ F ++
Sbjct: 475 FSRTGRMEIAYELFEVMR 492
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 2/177 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM-IKQGSDPDLETFNSLIETICKSG 59
M+ K P LV+G NA LE A+ ++ M G DPD+ T++ ++ ++
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
E + + TY LI + KAG +D A +L N+V P +
Sbjct: 375 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFN 434
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I R G D+A+ + G P YTTL+ R GR +E A L E+
Sbjct: 435 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR-MEIAYELFEV 490
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG ++ A +++ M+ + +P + TFNS+I +C+ G+++ ++ ++ G
Sbjct: 401 LIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 460
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNL------VEDGHNPFP-SLYAPIIKGAFRR 128
+ TY L+ S+ G ++ A+ L + N P ++ +I+G +
Sbjct: 461 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKA 520
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ D A E++ + P ++ R GR EA + ++++GL
Sbjct: 521 REIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D+G P VR + ++ +G E A ++ +M+ G+ P T+ +LI K+G+
Sbjct: 169 LEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGK 228
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + + G +V TY LI A KAG A LL + D P +
Sbjct: 229 IEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNA 288
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + GQ+ A F ++ G P+ Y LI+ RG ++ A L EM G
Sbjct: 289 LLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQG 348
Query: 181 LTPISRCFDLVTDGLKNCG 199
P +++V + L G
Sbjct: 349 HRPDVGVYNVVIEALTRSG 367
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V L+ + A LE A + +++++G P+L T+N LI+ K G
Sbjct: 99 MRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGN 158
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V++ ++ G+ +V TY ++ A +++G + A R+ ++ DG P + Y
Sbjct: 159 WQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTA 218
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ ++A F ++ +G N Y++LI+ C + GR+ A L EM
Sbjct: 219 LISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDN 278
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQL 210
P + F+ + G+ A+ + EQ+
Sbjct: 279 CKPNTVTFNALLSACAQGGQWKAAQDVFEQM 309
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + ++L+ G + A Q+++ + QG+ P++ T+N+++ +SG+ E
Sbjct: 137 EGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEH 196
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +Y + G+ +TY LI A K G I+EA R+ ++V G Y+ +I
Sbjct: 197 ALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLIS 256
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G++ A E+ PN + L++ C +GG++ A + +M G P
Sbjct: 257 ACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKP 316
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A ++V +M G ++ T+++L+ K+ E+E +++Y + + G ++ TY I
Sbjct: 89 LRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNI 148
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI K G EA ++L L + G P Y I+ R GQ + A + + G
Sbjct: 149 LIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADG 208
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P YT LI+ G+ G+ EA +M G + + + G+ LA
Sbjct: 209 AQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLA 267
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 67/166 (40%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
D+ T+ ++I ++ +E+ + G +V TY L+ KA ++ A +
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
L+ +G P Y +I + G + +A ++ +G P Y T+++ C R
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRS 191
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G+ A M G P + + + GK + A +I Q
Sbjct: 192 GQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQ 237
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KG P + + LV+GL G + A +++N+M + G PD+ T+N +I +CK G V
Sbjct: 383 EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVS 442
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ G DV T+ LI K +D A ++ + G +P Y I+
Sbjct: 443 DADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSIL 502
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+++D F + KG PN Y L + + EA N + EM GLT
Sbjct: 503 NGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P F + G + G D A ++
Sbjct: 563 PDVVNFGTLMKGFCDNGDLDGAYQL 587
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 1/196 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G +P + ++ +QG L A ++++ + +G PD+ T+N+LI +CK+ +V
Sbjct: 245 RGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVE 303
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ G D TY +I K GM+ A ++L + G P S Y +I
Sbjct: 304 AEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLIN 363
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G D A F+E KG PN + TL+ + G ++A + EM+E G +P
Sbjct: 364 GLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSP 423
Query: 184 ISRCFDLVTDGLKNCG 199
++LV +GL G
Sbjct: 424 DIWTYNLVINGLCKIG 439
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L+ L G+++ +++++NK++K+G P+L T N I+ C+ +
Sbjct: 211 GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEA 270
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + V + G DV TY LI + K + EA L +V +G+ P Y II G
Sbjct: 271 IRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDG 329
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G +A + KG P+ Y +LI + G A N E E GL P
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPN 389
Query: 185 SRCFDLVTDGLKNCG 199
+ + GL G
Sbjct: 390 LVLCNTLVKGLSQQG 404
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 98/202 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ P + ++ G G +++A Q++ +G PD T+ SLI +C+ G+
Sbjct: 311 MVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGD 370
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G ++ L+ +S+ G+I +A +L++ + E+G +P Y
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DA + KGH P+ + TLI + + A + M G
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
++P ++ + +GL GK++
Sbjct: 491 VSPDVITYNSILNGLCKAGKYE 512
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 8/213 (3%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V + L+ G L++A ++V++M G PD+ T+NS++ +CK+G+ E
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G ++ TY IL + KA ++EA L+ + G P + ++K
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF--VEAANYLMEMTEMGL 181
G G D A+ F + + + + + T I + G+ A +M E G
Sbjct: 574 GFCDNGDLDGAYQLFKRVD-EQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGF 632
Query: 182 TPISRCFDLVTDGL-----KNCGKHDLAEKIEQ 209
+P S + ++ DG N G L KIE+
Sbjct: 633 SPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ GL + A+ + KM+ +G +PD T+NS+I+ CK G ++
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ G D STY LI + + G ID A + + +E G P L ++K
Sbjct: 339 ADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVK 398
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++G A +E+ G P+ Y +I + G +A N +++ G P
Sbjct: 399 GLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLP 458
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIE 208
F+ + DG C K L IE
Sbjct: 459 DVFTFNTLIDGY--CKKLKLDNAIE 481
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V + ++ +A++++N M QG + + ++I +
Sbjct: 137 MRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENH 196
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E++ + LG C D+ + LI + + G + E+ RLL+ +++ G +P
Sbjct: 197 RVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNI 256
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+G +R ++A + +G P+ Y TLI + + VEA +YL +M G
Sbjct: 257 FIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG 315
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + DG G A++I
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQI 342
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P L+ GL G ++ A + N+ +++G P+L N+L++ + + G +
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ TY ++I + K G + +A L+ + + GH P + +I
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++ + D+A + G P+ Y +++ + G++ + M E G P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++++T+ C + E + +E
Sbjct: 529 NIITYNILTESF--CKARKVEEALNLIE 554
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G +P + +L++ GL G + A +V I +G PD+ TFN+LI+ CK +
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + G DV TY ++ + KAG ++ ++E G P Y
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNI 535
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
+ + + + ++A E++ KG P+ + TL+ C G
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNG 579
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + ++L + A +E A ++ +M +G PD+ F +L++ C +G+
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580
Query: 61 VEFCVEMYYSVCKLGSCAD-VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ +++ V + + ++TY I+I A + ++ A +L + + E+G +P Y
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G + + F KG P+ + ++ R EA + M
Sbjct: 641 VMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700
Query: 180 GLTP 183
G+ P
Sbjct: 701 GIVP 704
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V + ++ GL AG E M+++G P++ T+N L E+ CK+ +
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + G DV + L+ G +D A++L + E
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605
Query: 121 IIKGAFR-RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ AF + + A F+++ G P+ Y +I + G ++L+ E
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GL P F V + L C K + E +
Sbjct: 666 GLIPSLTTFGRVLNCL--CLKRRVHEAV 691
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 2/188 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G ++ A + +M +P ++++N+++ + + + ++Y + G DV T+
Sbjct: 90 GKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I + + + A RLL+N+ G Y +I G + +A F E+
Sbjct: 150 TIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG 209
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G P+ + LI R G E+ L ++ + G++P ++ G C + L
Sbjct: 210 LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGF--CQRAML 267
Query: 204 AEKIEQLE 211
E I L+
Sbjct: 268 NEAIRLLD 275
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ L A + A ++ M+ +G P++ T+ +LI+ CK+G+
Sbjct: 521 MLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQ 580
Query: 61 VEFCVEMY--------------YSVCKLGSCA--DVSTYKILIPAVSKAGMIDEAFRLLH 104
+E ++Y Y +C +V TY L+ + KA + EA LL
Sbjct: 581 IEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLD 640
Query: 105 NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGG 164
++ G P +Y +I G + G+ DA F+++ +G+ PN Y++ I +
Sbjct: 641 TMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDN 700
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R L +M E TP + + DGL GK D A K+
Sbjct: 701 RLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKL 743
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV GL A ++ A ++++ M+ G +P+ ++++I+ CK G+++ E+
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G ++ TY I + K +D ++L ++E+ P +Y ++ G +
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ D+A+ +++ KG PN YT +I G+ G+ + +M G P
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAP 789
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 85/217 (39%), Gaps = 41/217 (18%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L+ G L G L K++++ MI +G P+ E FNSLI CKS + + ++
Sbjct: 312 PNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKL 371
Query: 68 YYSVCKLGSCADVSTYKILIPAVSK----------------------------------- 92
+ + K G Y I I +V
Sbjct: 372 FKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNF 431
Query: 93 ------AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
AG D+AF+++ ++ G P S Y+ +I + + AF F E+K G
Sbjct: 432 ARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGI 491
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
P+ YT LI + G +A + EM G TP
Sbjct: 492 VPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTP 528
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +V GL G + A +++ KM ++G +P++ T+ ++I+ KSG+
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E C+E++ +C G + TY++LI G++DEA++LL + + +
Sbjct: 772 IEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRK 831
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
II+G + +F + E+ P +Y LI + GR A + L E++
Sbjct: 832 IIEGFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEIS 886
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++G++P + + L L+ ++++KM++ P++ + +++ +CK G+
Sbjct: 677 MSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGK 736
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G +V TY +I K+G I++ L ++ G P Y
Sbjct: 737 TDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRV 796
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D+A+ E+K P + + +I G F+ + L E++E
Sbjct: 797 LINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIE--GFSQEFITSIGLLDELSENE 854
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P+ + ++ D G+ ++A
Sbjct: 855 SVPVDSLYRILIDNYIKAGRLEVA 878
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 16/223 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++ L +A +E A + +M + G P + T+ LI++ CK+G
Sbjct: 451 MMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL 510
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G +V TY LI A KA + A L ++ +G P Y
Sbjct: 511 IQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTA 570
Query: 121 IIKGAFRRGQFDDAFCFFSEIK--IKGHP--------------PNRPVYTTLITMCGRGG 164
+I G + GQ + A ++ ++ I+ PN Y L+ +
Sbjct: 571 LIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKAN 630
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R EA L M G P +D V DG GK A+++
Sbjct: 631 RVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L AG + A +++ +M+ +G PD T++ +I +C + +VE ++ + + G
Sbjct: 435 LCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPS 494
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V TY ILI + KAG+I +A + ++ G P Y +I + Q A F
Sbjct: 495 VYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFE 554
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ ++G PN YT LI + G+ +A M
Sbjct: 555 MMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK--QGSD--------------PDLET 47
+G P V L+ G AG +E A Q+ +M + SD P++ T
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVIT 618
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+ +L++ +CK+ V+ E+ ++ G + Y +I K G + +A + +
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
E G++P Y+ I F+ + D S++ PN +YT ++ + G+
Sbjct: 679 ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD 738
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
EA +++M E G P + + DG GK
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 4/184 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D G+ P + L+Q L A L++A + +M+ D T + ++CK G+
Sbjct: 202 LKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGK 261
Query: 61 VEFCVEMYYSVCKLGS-CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
C E + + + D Y ++ + +A + +EA +LH + P Y
Sbjct: 262 ---CREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYR 318
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G R+GQ S + +G PNR ++ +LI + + A +M +
Sbjct: 319 ILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKC 378
Query: 180 GLTP 183
G P
Sbjct: 379 GCQP 382
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 36 MIKQGSD--PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
+I + D PD +N ++ +C++ E +++ + + +V TY+IL+ +
Sbjct: 268 LIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRK 327
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G + R+L ++ +G P ++ +I + + A+ F ++ G P VY
Sbjct: 328 GQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVY 387
Query: 154 TTLI 157
I
Sbjct: 388 NIFI 391
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+QG G L AK+++ +++ G D+ F+S+I +CK G
Sbjct: 459 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGR 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ +G D Y +L+ G +++A R+ +V G P +Y
Sbjct: 519 IMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGT 578
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F E+ KG P+ +Y +I GR V A EMTE G
Sbjct: 579 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESG 638
Query: 181 LTPISRC-FDLVTDGL 195
+ I++C +++V G
Sbjct: 639 IA-INKCTYNIVLRGF 653
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++ L G ++ A + N+MI QG PD ++ LI+ C G
Sbjct: 424 MRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D+ + +I + K G I +A + V G +P +Y+
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSM 543
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F + G PN VY TL+ + GR E + EM + G
Sbjct: 544 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 603
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++++ DGL G+
Sbjct: 604 IKPSTILYNIIIDGLFVAGR 623
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ G + G + A ++ +M + PD+ T N L+ ++CK G+
Sbjct: 284 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGK 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ ++ G DV +YKI++ + G + + L ++ DG P ++
Sbjct: 344 IKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSV 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK G D A F+E++ G P+ YTT+I R G+ +A +M + G
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463
Query: 181 LTPISRCFDLVTDGL 195
+ P + + G
Sbjct: 464 VAPDKYAYHCLIQGF 478
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP V +++ G G L + + M+ G PD+ TF+ LI+ G
Sbjct: 354 MAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGM 413
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G DV TY +I A+ + G +D+A + +++ G P Y
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A EI G + ++++I + GR ++A N +G
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVG 533
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P + + ++ DG GK + A ++ VS
Sbjct: 534 QHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 566
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 97/207 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ L G ++ A+ + + M +G +PD+ ++ ++ G + ++
Sbjct: 326 PDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDL 385
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D+ T+ +LI A + GM+D+A + + + + G P Y +I R
Sbjct: 386 FDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCR 445
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DDA F+++ +G P++ Y LI G ++A ++E+ G+
Sbjct: 446 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVF 505
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSL 214
F + + L G+ A+ I L V++
Sbjct: 506 FSSIINNLCKLGRIMDAQNIFDLTVNV 532
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P +L+ G G +E A ++ + M+ G +P++ + +L+ CK G ++
Sbjct: 533 GQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEG 592
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G Y I+I + AG A H + E G Y +++G
Sbjct: 593 LSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRG 652
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F+ FD+A F E++ + T+I + R EA + ++ GL P
Sbjct: 653 FFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L G + A+ + + + G PD ++ L++ C G++E + ++ ++ G
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 568
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V Y L+ K G IDE L +++ G P LY II G F G+ A
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
F E+ G N+ Y ++ + F EA E+ M +
Sbjct: 629 VKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNV 674
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKSGEVE 62
G P V +L++ L + G A ++ M + G+ PD+ + ++I+ K G+V
Sbjct: 181 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVN 240
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+++ + + G D+ TY ++ A+ KA + +A L +V G P Y +I
Sbjct: 241 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLI 300
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G GQ+ +A F E++ P+ L+ + G+ EA + M G
Sbjct: 301 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQN 360
Query: 183 PISRCFDLVTDGLKNCG 199
P + ++ +G G
Sbjct: 361 PDVFSYKIMLNGYATKG 377
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCKLGSCADVSTYKI 85
E A ++++ G D+ N L++ C++ + ++ + + +LG DV +Y I
Sbjct: 132 ELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 191
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ ++ G +A LL + E G P + Y +I F+ G + A F E+
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQ 251
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PP+ Y++++ + +A +L +M G+ P + ++ + G + G+
Sbjct: 252 RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 311
Query: 204 AEKI 207
A ++
Sbjct: 312 AVRV 315
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + ++ + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y +M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YMP 414
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ GL A ++ A +M+ +M K PD T+N LI+ +CKSG+
Sbjct: 200 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 259
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G DV TY ILI KAG D A + ++ +P Y
Sbjct: 260 VAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGT 319
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +R Q A ++ +K +G PP+ VY++L+ + G+ EM G
Sbjct: 320 LISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 379
Query: 181 L 181
+
Sbjct: 380 V 380
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL+ AG L A + + G D+ T+ ++++ + K+ +++ V + +
Sbjct: 4 ILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITAN 63
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G ++TY L+ + K G ++EA LL +V++G P Y +I G ++ + +A
Sbjct: 64 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEA 123
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ F E+ +G + YT LI + G+ +A++ MT G P + DG
Sbjct: 124 YKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 183
Query: 195 LKNCGKHDLAEKI 207
L G+ A +I
Sbjct: 184 LCKAGRIGAAVRI 196
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V ++ GL AG + +A ++ M +G P+ +++LI +CK+ +
Sbjct: 165 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 224
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +EM + K D TY ILI + K+G + A ++E G P Y
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D A F ++ PN Y TLI+ + + +A+ Y M E G
Sbjct: 285 LISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG 344
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P S + + DGL GK
Sbjct: 345 CPPDSFVYSSLVDGLCKSGK 364
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P + + L+ GL G LE A ++ K++ G PD+ T+ SLI+ + K
Sbjct: 60 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + G D Y LI + +AG I +A + + G P +
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F ++ +G PN VY+ LI + + A L +M +
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
TP + ++++ DGL C D+A
Sbjct: 240 CTPDTITYNILIDGL--CKSGDVA 261
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V L ++ A ++ K+ G P + T+N+L+ +CK G +E +++ + G
Sbjct: 40 IVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 99
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + K EA++L + G Y +I+G + G+ A
Sbjct: 100 CTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQAS 159
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + +G P+ +T+I + GR A M GL P + + GL
Sbjct: 160 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 219
Query: 196 KNCGKHDLA-EKIEQLE 211
K D A E + Q++
Sbjct: 220 CKARKMDCALEMLAQMK 236
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 35/167 (20%)
Query: 82 TYKILIPAVSKAGM-----------------------------------IDEAFRLLHNL 106
T+ ILI + KAGM I EA L+ +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+G P + Y ++ G + G+ ++A +I G P+ YT+LI G+ R
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
EA EM GL + C+ + GL GK A + + S
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTS 167
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K G P + +FN+L+ K G ++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319
Query: 194 G 194
G
Sbjct: 320 G 320
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YAP 414
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ + ++M +G PD T+ +LI+ CK G
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGH 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYAPS 415
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V L+ L G + AK+ + M+ +G PDL TF SLIE C G+
Sbjct: 263 MVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGD 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ S+ G DV +Y +LI K ++EA +L + ++ G P +
Sbjct: 323 LDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCV 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG F G+ DA F +K P N + + + + G EA E+
Sbjct: 383 LLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYN 442
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQ 209
+ F+ + DGL K +L EK+ Q
Sbjct: 443 MKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++L+ L N + + ++++G PD+ T+ SLI+ +C
Sbjct: 117 MHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHR 176
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF-----P 115
+ ++ + KLG +V TY LI + + G I+ A + LH + +G +P+ P
Sbjct: 177 ISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALK-LHQEMLNGTSPYAINCKP 235
Query: 116 SL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
++ Y II + G++ +A F+E+ +G P+ ++ LI + G +EA +L
Sbjct: 236 NIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFL 295
Query: 174 MEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M G+ P F + +G G D A+++
Sbjct: 296 ETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 35/228 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
M KG+ P V +L+ G +E A ++ N+M++ G PD++TF L+
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392
Query: 53 ---------------------------ETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ +CK+G + +E++ + D+ ++
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNC 452
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + KA ++ A+ L L ++G P Y +I G + GQ D+A F ++ G
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
PN Y+ L+ + + E L +M + ++ + + +V D
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVED 560
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P V L++GL + A ++ +M K G P++ T+ +LI+ +C++G +
Sbjct: 155 RGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINL 214
Query: 64 CVEMY---------YSV----------------CKLGSCA----------------DVST 82
++++ Y++ CK+G DV T
Sbjct: 215 ALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVT 274
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ LI + K GM+ EA + L ++ G P + +I+G G D A F +
Sbjct: 275 FSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMP 334
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
KG+ P+ YT LI + EA EM +G P + F ++ GL GK
Sbjct: 335 SKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVG 394
Query: 203 LAEKI 207
A+K+
Sbjct: 395 DAKKL 399
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 72/188 (38%), Gaps = 6/188 (3%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+LL+ L + + KM G P+ T N LI +C V + + +
Sbjct: 95 NLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMR 154
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY LI + I EA RL + + G P Y +IKG R G +
Sbjct: 155 RGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINL 214
Query: 134 AFCFFSEIKIKGHP------PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
A E+ P PN Y +I + G++ EA EM + G+ P
Sbjct: 215 ALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVT 274
Query: 188 FDLVTDGL 195
F + D L
Sbjct: 275 FSALIDTL 282
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 8/168 (4%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+FN L+ + K +Y + G + T ILI + + E + +
Sbjct: 93 SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGI 152
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+ G+ P Y +IKG + +A F ++ G PN Y TLI R G
Sbjct: 153 MRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNI 212
Query: 167 VEAANYLMEMTEMGLTPIS-RC------FDLVTDGLKNCGKHDLAEKI 207
A EM G +P + C ++++ D L GK A+++
Sbjct: 213 NLALKLHQEMLN-GTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRL 259
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P + L+ G NAG + A ++ M ++G +P+ + LI+ +CK
Sbjct: 279 MKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDR 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++++ + + ADV TY L+ K G ID+ + +L ++++ G P Y
Sbjct: 339 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMH 398
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + + ++K + P+ +Y +I + + G EA EM G
Sbjct: 399 IMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNG 458
Query: 181 LTPISRCFDLVTDGLKNCG 199
L+P + F ++ +GL + G
Sbjct: 459 LSPGADTFVIIINGLTSQG 477
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P +L+Q L +E A ++ +M + + D+ T+ +L+ CK G+
Sbjct: 314 MRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 373
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C + + K G TY ++ A K + E L+ + + ++P +Y
Sbjct: 374 IDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNV 433
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ A + G+ +A ++E++ G P + +I G +EA ++ EM G
Sbjct: 434 VIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMVARG 493
Query: 181 LTPI 184
L +
Sbjct: 494 LFSV 497
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 1/188 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LVQ +A ++ A +++++M G +PD F L++ +CK G V+ +++ + +L
Sbjct: 189 VLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RL 247
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
++ + L+ + + EA +L + E G P Y ++ G G+ DA
Sbjct: 248 RFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADA 307
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ +++ +G PN YT LI + R EA +EM + + G
Sbjct: 308 YDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 367
Query: 195 LKNCGKHD 202
GK D
Sbjct: 368 FCKWGKID 375
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 32 MVNKMIKQGSDPDL---ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
++ +M K+ +P L E F L++ + V+ +E+ + G D + L+
Sbjct: 170 LIEEMRKE--NPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLD 227
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFP---SLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
A+ K G + +A +L ED FP + ++ G R + +A ++K G
Sbjct: 228 ALCKHGSVKDAAKLF----EDMRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAG 283
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ YT L++ G+ +A + L +M G P + C+ ++ L + + A
Sbjct: 284 FEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAM 343
Query: 206 KI 207
K+
Sbjct: 344 KV 345
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTP 183
L P
Sbjct: 377 LKP 379
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 282 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + +++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CKKGDLKQ 294
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 235 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 295 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 354
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAP 414
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 415 SVVTYNVLMNG 425
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 190
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 191 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 250
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 311 KFTYTTLIDGC--CKEGDLDTAFEH 333
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 387 IINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 423
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 72 LITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 252 CKNGRVDLAMEIYKQMLS 269
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 302 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D+ TY ++I K G + + +LL + +GH P Y
Sbjct: 362 SVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNV 421
Query: 121 IIKG 124
++ G
Sbjct: 422 LMNG 425
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+QG G L AK+++++++ G D+ F+S+I +CK G
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGR 514
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ +G Y +L+ G +++A R+ +V G P +Y
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F E+ KG P+ +Y +I GR V A EMTE G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Query: 181 LTPISRCFDLVTDGL 195
+ + +V GL
Sbjct: 635 IAMNKCTYSIVLRGL 649
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++ L G ++ A + N+MI QG PD ++ LI+ C G
Sbjct: 420 MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D+ + +I + K G + +A + V G +P +Y+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F + G PN VY TL+ + GR E + EM + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++++ DGL G+
Sbjct: 600 IKPSTILYNIIIDGLFEAGR 619
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ G + G + A ++ +M +Q PD+ TFN L+ ++CK G+
Sbjct: 280 MVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGK 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ ++ G DV +Y I++ + G + + L ++ DG P +
Sbjct: 340 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK G D A F+E++ G PN YTT+I R G+ +A +M + G
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 181 LTPISRCFDLVTDGL 195
+ P + + G
Sbjct: 460 VAPDKYAYHCLIQGF 474
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP V ++++ G G L + + M+ G P + TFN LI+ G
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGM 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G +V TY +I A+ + G +D+A + +++ G P Y
Sbjct: 410 LDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A SEI G + +++++I + GR ++A N +G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + + ++ DG GK + A ++ VS
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 98/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V ++L+ L G ++ A+ + + M +G +PD+ ++N ++ G
Sbjct: 315 MRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 374
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + T+ +LI A + GM+D+A + + + + G P Y
Sbjct: 375 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTT 434
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ DDA F+++ +G P++ Y LI G ++A + E+ G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ F + + L G+ A+ I L V++
Sbjct: 495 MHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P +L+ G G +E A ++ + M+ G +P+ + +L+ CK G ++
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G Y I+I + +AG A H + E G Y+ +++G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 648
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ FD+A F E++ + T+I + R EA + ++ GL P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ ++ + N K L E+ E + S+++
Sbjct: 709 VVTYSIM---ITNLIKEGLVEEAEDMFSSMQN 737
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 82/198 (41%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V + ++ G G + A + +M+++G PD T++S++ +CK+ ++
Sbjct: 216 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ G + TY LI S G EA R+ + P + ++
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLC 335
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ +A F + +KG P+ Y ++ G V+ + M G+ P+
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 395
Query: 187 CFDLVTDGLKNCGKHDLA 204
F+++ NCG D A
Sbjct: 396 TFNVLIKAYANCGMLDKA 413
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCKLGSCADVSTYKI 85
E A ++++ G D+ N L++ C++ + ++ + + +LG DV +Y I
Sbjct: 128 ELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 187
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ ++ G +A LL + E G P + Y +I G F+ G + A F E+
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PP+ Y++++ + +A +L +M G+ P + ++ + G + G+
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 204 AEKI 207
A ++
Sbjct: 308 AVRV 311
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 61/127 (48%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++GL + A + ++ D+ T N++I + ++ VE +++ S+ +
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V TY I+I + K G+++EA + ++ G P L +++ ++ + A
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763
Query: 135 FCFFSEI 141
+ S+I
Sbjct: 764 GAYLSKI 770
>gi|125539212|gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
Length = 538
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G P V + LV L AG A + ++M+ G P+ + N LI+ + E +
Sbjct: 87 DGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFD 146
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E+ + K G DV TY LI + +AG + EA+ +L ++E P Y PI+
Sbjct: 147 LAWELIH---KSGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIV 203
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ R G+ +A +E++ G PN Y LI +F E LME +
Sbjct: 204 QAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWK 263
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P + +++ +GL C K E +E L+V L
Sbjct: 264 PSTVTYNIYMNGL--CKKGKAKEALELLDVML 293
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V + ++ L G +++ MIK+G +P+ TFN LI ++C G+ + +
Sbjct: 336 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIH 395
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
S G A+V TY IL+ G + EA RL+ + E P Y II G R
Sbjct: 396 SQ---GFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 452
Query: 130 QFDDAF-CFFSEI 141
+FD A CF +
Sbjct: 453 KFDAATACFLKSL 465
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V L+ GL AG + A +++ M+++ P ++T+ +++ C+ G +
Sbjct: 156 GVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 215
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + +LG +V TY +LI A+ DE ++L P Y + G
Sbjct: 216 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 275
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++G+ +A + +G P ++ L+ R ++A L TE+
Sbjct: 276 LCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 335
Query: 185 SRCFDLVTDGLKNCGK 200
++ V L GK
Sbjct: 336 VVAYNTVMSSLCEMGK 351
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P V+ +VQ G + AK ++ +M + G P++ T+N LI +C +
Sbjct: 187 MLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDK 246
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ TY I + + K G EA LL ++ +G P ++
Sbjct: 247 FDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSI 306
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + DA Y T+++ G++ L +M + G
Sbjct: 307 LLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKG 366
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P +R F+++ L GK LA+ +
Sbjct: 367 IEPNTRTFNILIRSLCVGGKSSLAKSL 393
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 3/182 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ L ++ L A ++ + + + +N+++ ++C+ G+
Sbjct: 292 MLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGK 351
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + K G + T+ ILI ++ G A L+H+ G Y
Sbjct: 352 WRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHS---QGFAANVVTYNI 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ +A S ++ K P+ YT +I R +F A ++ G
Sbjct: 409 LLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLTSG 468
Query: 181 LT 182
L+
Sbjct: 469 LS 470
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ +QGL G L A M++ +I++G PD+ T+N+LI +CK+ V + + +
Sbjct: 255 NIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVN 314
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY LI K GM+ A ++L + G P Y +I G + + D
Sbjct: 315 GGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDR 374
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F+ KG P +Y LI + G ++A + EM+E G + ++LV +
Sbjct: 375 ALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVIN 434
Query: 194 GL 195
GL
Sbjct: 435 GL 436
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P V ++L++GL G + A QM+N+M + G D+ T+N +I +CK G V
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSD 444
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ G DV T+ LI K ++ ++L+ + G P Y ++
Sbjct: 445 ANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLN 504
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + +D F + KG PN+ Y L + G+ EA + + E+ G+TP
Sbjct: 505 GLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITP 564
Query: 184 ISRCFDLVTDGLKNCG 199
+ F + G N G
Sbjct: 565 DTVSFATIISGFANNG 580
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V G Y A ++ N M++ G PD+ TFN L+ T+CK GEV+ + V K G
Sbjct: 187 VVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKG 246
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
C+++ T+ I I + + GM+ A +L +++ +G P Y +I G + +A
Sbjct: 247 MCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAE 306
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y TLI + G A L G P + + +GL
Sbjct: 307 KYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGL 366
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ L G ++ +++++NK++K+G +L TFN I+ +C+ G +
Sbjct: 211 GIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGA 270
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ M SV + G DV TY LI + K + EA + LH LV G P Y +I G
Sbjct: 271 MSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDG 330
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G +A KG P+ Y +LI + A GL P
Sbjct: 331 YCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPT 390
Query: 185 SRCFDLVTDGL 195
++++ GL
Sbjct: 391 VILYNMLIKGL 401
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G + + +L++ GL G + A ++N I +G PD+ TFN+LI+ CK +
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G DV TY ++ +SKA ++ +VE G P Y
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + + G+ ++A EI KG P+ + T+I+ G A M E
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGE 594
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 35/237 (14%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETF------------------- 48
P V + ++ L+ +GY + A ++ +M G PD+ TF
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRL 168
Query: 49 -NSLIETICKSGEVEFCV---------------EMYYSVCKLGSCADVSTYKILIPAVSK 92
N+++ C+ V +C E++ + ++G DVST+ L+ + K
Sbjct: 169 LNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCK 228
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G + E+ RLL+ +++ G + I+G R+G A + +G P+
Sbjct: 229 KGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVT 288
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
Y TLI + VEA YL ++ GL P ++ + DG G AEKI Q
Sbjct: 289 YNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ 345
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 90/197 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P L+ GL ++ A + N + +G P + +N LI+ +C+ G +
Sbjct: 350 KGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQ 409
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++M + + G +D+ TY ++I + K G + +A L+++ + G+ P + +I
Sbjct: 410 ALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLID 469
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G ++ + + +++ G P+ Y +++ + + + M E G P
Sbjct: 470 GYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVP 529
Query: 184 ISRCFDLVTDGLKNCGK 200
++++T+ L GK
Sbjct: 530 NKITYNILTESLCKAGK 546
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ GL + A++ ++K++ G +PD T+N+LI+ CK G ++
Sbjct: 280 EGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQN 339
Query: 64 CVEMYY-SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ ++CK G D TY LI + + ID A L + + G P LY +I
Sbjct: 340 AEKILQGAICK-GFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLI 398
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
KG + G A +E+ G + Y +I + G +A N + + G
Sbjct: 399 KGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYV 458
Query: 183 PISRCFDLVTDG 194
P F+ + DG
Sbjct: 459 PDVFTFNTLIDG 470
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 2/192 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G ++ A + +M +P + ++N+++ + +SG + +++ + +G DV T+
Sbjct: 90 GKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF 149
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
I I + + A RLL+N+V G Y ++ G + +A+ F+++
Sbjct: 150 TIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLR 209
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G P+ + L+ + G E+ L ++ + G+ F++ GL C K L
Sbjct: 210 IGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGL--CRKGML 267
Query: 204 AEKIEQLEVSLR 215
+ + L+ +R
Sbjct: 268 SGAMSMLDSVIR 279
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ-GSDPDLETFNSLIETICKSGEV 61
+KG P ++ G N G L+ A Q+ +M +Q T+N +I + ++
Sbjct: 559 NKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDL 618
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+++ + G D TY+++I G D ++ L ++E G P + + +
Sbjct: 619 HMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRV 678
Query: 122 I 122
I
Sbjct: 679 I 679
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK G
Sbjct: 203 MLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ +V G P Y
Sbjct: 263 VDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 383 LKPDTGTYTMIINEF--CKKGDVWK 405
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A M L P ++ + GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 ANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + ++N+L+ + G+++ + ++
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY +LI + K +D+A L ++ G P + +I G ++G+ D
Sbjct: 206 SGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDL 265
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + + + P+ Y TLI + G +A + + EM GL P + + D
Sbjct: 266 AMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLID 325
Query: 194 GLKNCGKHDLAEKIEQ 209
G C + DL E
Sbjct: 326 GC--CKEGDLDTAFEH 339
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M+ +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLM 429
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 198 RLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKKGRVDLAMEIYKRMLS 275
>gi|224112321|ref|XP_002316152.1| predicted protein [Populus trichocarpa]
gi|222865192|gb|EEF02323.1| predicted protein [Populus trichocarpa]
Length = 785
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V +L++ L +G L++A ++ +M ++ P L F+SL++++ K+G +E +++Y
Sbjct: 262 VSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYM 321
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ LG Y LI + +KAG +D A RL + G P LY II+ + G
Sbjct: 322 EMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSG 381
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ D A F +++ G P Y++L+ M G+ A MT GL P +
Sbjct: 382 KLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTYT 441
Query: 190 LVTDGLKNCGKHDLAEKI 207
+ L + D+A KI
Sbjct: 442 ALLTLLAHKKLVDVAAKI 459
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ F P + LV + AG LE++ ++ +M G P + SLIE+ K+G+
Sbjct: 288 MKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGK 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G + Y ++I + +K+G +D A + ++ + G P PS Y+
Sbjct: 348 LDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSS 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ GQ D A ++ + G P YT L+T+ AA L+EM MG
Sbjct: 408 LLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMG 467
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ D++ +K+ G DL+
Sbjct: 468 FSVDVSASDVLMVYIKD-GSVDLS 490
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
K+ G D ET+N L++ G E+Y ++ DVSTY+++IP+++K+G
Sbjct: 217 KVQDSGCKIDTETYNILMKLFLNKGLPYKAFEIYETMEAAHCSLDVSTYELMIPSLAKSG 276
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
+D AF+L + E P +++ ++ + G+ + + + E++ G P+ +Y
Sbjct: 277 RLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYV 336
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+LI + G+ A EM G P + L+ + GK D+A I
Sbjct: 337 SLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSI 389
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
+MV IK + +N +++ + K+ ++E + V G D TY IL+
Sbjct: 180 EMVCDSIKSATQ--FSAYNRVLKYLAKAEKLEVSFCCFKKVQDSGCKIDTETYNILMKLF 237
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFP-SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
G+ +AF ++ +E H S Y +I + G+ D AF F E+K + P+
Sbjct: 238 LNKGLPYKAFE-IYETMEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPS 296
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++++L+ G+ GR + MEM +GL P + + + + GK D A ++
Sbjct: 297 LGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRL 354
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 244 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 304 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 364 LKPDTGTYTMIVNEF--CKKGDVWK 386
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + D A
Sbjct: 154 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGAN 213
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 214 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 273
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 274 --CKKGDLKQ 281
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 149 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 208
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 209 MDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 268
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 269 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 328
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 329 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 365
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 222 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 281
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 282 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 341
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT ++ + G + + L EM G P
Sbjct: 342 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAP 401
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 402 SVVTYNVLMNG 412
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + ++N+L+ + G+++ + ++
Sbjct: 127 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 186
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D A L ++ G P + +I G + G+ D
Sbjct: 187 SGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 246
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 247 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLID 306
Query: 194 GLKNCGKHDLAEKIEQ 209
G C + DL E
Sbjct: 307 GC--CKEGDLDTAFEH 320
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 254 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 314 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
I+ ++G E++ GH P+ Y L+
Sbjct: 374 IVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 410
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 289 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY +++ K G + + +LL + DGH P Y
Sbjct: 349 SVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNV 408
Query: 121 IIKG 124
++ G
Sbjct: 409 LMNG 412
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 59 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 118
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 178
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + A EM GL P F + DG
Sbjct: 179 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 239 CKNGRVDLAMEIYKQMLS 256
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G G ++ A ++ KMI+Q PD+ T+NSLI+ +CK+ E+
Sbjct: 59 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 118
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G + TY LI S AGM E+ R+ + G P I
Sbjct: 119 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 178
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R + +A F + +KG PN Y+TL+ G F + + M G+ P
Sbjct: 179 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 238
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
R F+++ + CG D A
Sbjct: 239 HRFFNILINAYARCGMMDKA 258
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + L+ G G + +VN M+ +G P+ FN LI + G ++
Sbjct: 198 KGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDK 257
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ ++ + G D T+ +I ++ + G +D+A +++V+ G P ++Y +I+
Sbjct: 258 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQ 317
Query: 124 GAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G G+ A SE+ K PP ++++I + GR E + + M + G
Sbjct: 318 GCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQR 377
Query: 183 PISRCFDLVTDG 194
P F+ + +G
Sbjct: 378 PNVVTFNSLMEG 389
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P V + L+ GL + +++++ +M+ G P+ +T+NSLI +G
Sbjct: 90 MIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGM 149
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V ++ + G V I A+ + I EA + ++V G P Y+
Sbjct: 150 WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYST 209
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G F + + + KG PN + LI R G +A +M G
Sbjct: 210 LLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKG 269
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + F V L G+ D A
Sbjct: 270 MIPDTVTFATVISSLCRIGRLDDA 293
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 1/185 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P R ++L+ G ++ A + M +G PD TF ++I ++C+ G
Sbjct: 230 MVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 289
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFPSLYA 119
++ + + + +G + Y+ LI G + +A L+ ++ +D P ++
Sbjct: 290 LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 349
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
II F+ G+ + + G PN + +L+ G EA +YLM ++
Sbjct: 350 SIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQL 409
Query: 180 GLTPI 184
L I
Sbjct: 410 ALNRI 414
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
+AK+M ++MI+ G+ ++T+ ++ +C++ + + + + D+ T+ I+I
Sbjct: 424 AAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 483
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
A+ K G EA L + G P Y +I + +++A F ++ G
Sbjct: 484 SAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRA 543
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
P+ + ++ M + +A+NYL + E LT
Sbjct: 544 PDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLT 578
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 61/141 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G ++ +++ GL + A ++ K+ D+ TFN +I + K G
Sbjct: 432 MIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGR 491
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ ++ G V TY ++I + K +EA L ++ + G P L
Sbjct: 492 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 551
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
I++ ++ + A + S I
Sbjct: 552 IVRMLLKKAEVAKASNYLSII 572
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + + L++G LN ++ ++V+ M + G PD+ TF++L+ G+
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C E+Y + + G D+ + IL ++AG ++A ++L+ + + G P +Y
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676
Query: 121 IIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
II G G+ A + ++ I G PN Y TLI G + +A L +M
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 180 GLTPISRCFDLVTDGLKNCG 199
+ P + L+ DG K+ G
Sbjct: 737 NVVPTRKTMQLIADGWKSIG 756
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 1/199 (0%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
VR R L+ GL+ G + A + N +I++G P L T+ +L+ + + + +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
V K G D + +I A S++G +D+A ++ + E G P S + +IKG + G
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 130 QFDDAFCFFS-EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
+ +++ ++ + PN L+ + EA N + +M G+ P F
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ + G AE +
Sbjct: 499 NTLAKAYARIGSTCTAEDM 517
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
+ D+ P R ++LVQ N +E A +V KM G PD+ TFN+L + + G
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 60 ----EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
E M ++ K +V T ++ + G ++EA R + + E G +P
Sbjct: 511 TCTAEDMIIPRMLHNKVK----PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNL 566
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
++ +IKG D ++ G P+ ++TL+ G +
Sbjct: 567 FVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTD 626
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M E G+ P F ++ G G+ + AE+I
Sbjct: 627 MLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Query: 71 VCKLGS-CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+C G+ C DV + L+ + + G EA + + L+E+GH P Y ++ R+
Sbjct: 309 ICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQK 368
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
F S+++ G P+ ++ +I G +A +M E G P + F+
Sbjct: 369 HFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 428
Query: 190 LVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ G GK L E L++ LR
Sbjct: 429 TLIKGYGKIGK--LEESSRLLDMMLR 452
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++G P + LV L + S +++K+ K G PD FN++I +SG ++
Sbjct: 347 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 406
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPI 121
++++ + + G ST+ LI K G ++E+ RLL ++ D P +
Sbjct: 407 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNIL 466
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMG 180
++ + + ++A+ +++ G P+ + TL R G A + ++ M
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P R + +G GK + A
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEA 550
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 CMP 414
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGCMPS 415
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + + L++G LN ++ ++V+ M + G PD+ TF++L+ G+
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C E+Y + + G D+ + IL ++AG ++A ++L+ + + G P +Y
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQ 676
Query: 121 IIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
II G G+ A + ++ I G PN Y TLI G + +A L +M
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 180 GLTPISRCFDLVTDGLKNCG 199
+ P + L+ DG K+ G
Sbjct: 737 NVVPTRKTMQLIADGWKSIG 756
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 1/199 (0%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
VR R L+ GL+ G + A + N +I++G P L T+ +L+ + + + +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
V K G D + +I A S++G +D+A ++ + E G P S + +IKG + G
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 130 QFDDAFCFFS-EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
+ +++ ++ + PN L+ + EA N + +M G+ P F
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ + G AE +
Sbjct: 499 NTLAKAYARIGSTCTAEDM 517
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
+ D+ P R ++LVQ N +E A +V KM G PD+ TFN+L + + G
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 60 ----EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
E M ++ K +V T ++ + G ++EA R + + E G +P
Sbjct: 511 TCTAEDMIIPRMLHNKVK----PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNL 566
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
++ +IKG D ++ G P+ ++TL+ G +
Sbjct: 567 FVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTD 626
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M E G+ P F ++ G G+ + A++I
Sbjct: 627 MLEGGIDPDIHAFSILAKGYARAGEPEKAKQI 658
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Query: 71 VCKLGS-CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+C G+ C DV + L+ + + G EA + + L+E+GH P Y ++ R+
Sbjct: 309 ICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQK 368
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
F S+++ G P+ ++ +I G +A +M E G P + F+
Sbjct: 369 HFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 428
Query: 190 LVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ G GK L E L++ LR
Sbjct: 429 TLIKGYGKIGK--LEESSRLLDMMLR 452
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++G P + LV L + S +++K+ K G PD FN++I +SG ++
Sbjct: 347 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 406
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPI 121
++++ + + G ST+ LI K G ++E+ RLL ++ D P +
Sbjct: 407 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNIL 466
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMG 180
++ + + ++A+ +++ G P+ + TL R G A + ++ M
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P R + +G GK + A
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEA 550
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P + + L++G LN ++ ++V+ M + G PD+ TF++L+ G+
Sbjct: 580 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 639
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C E+Y + + G D+ + IL ++AG ++A ++L+ + + G P +Y
Sbjct: 640 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 699
Query: 121 IIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
II G G+ A + ++ I G PN Y TLI G + +A L +M
Sbjct: 700 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 759
Query: 180 GLTPISRCFDLVTDGLKNCG 199
+ P + L+ DG K+ G
Sbjct: 760 NVVPTRKTMQLIADGWKSIG 779
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 1/199 (0%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
VR R L+ GL+ G + A + N +I++G P L T+ +L+ + + + +
Sbjct: 342 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 401
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
V K G D + +I A S++G +D+A ++ + E G P S + +IKG + G
Sbjct: 402 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 461
Query: 130 QFDDAFCFFS-EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
+ +++ ++ + PN L+ + EA N + +M G+ P F
Sbjct: 462 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 521
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ + G AE +
Sbjct: 522 NTLAKAYARIGSTCTAEDM 540
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG- 59
+ D+ P R ++LVQ N +E A +V KM G PD+ TFN+L + + G
Sbjct: 474 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 533
Query: 60 ----EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
E M ++ K +V T ++ + G ++EA R + + E G +P
Sbjct: 534 TCTAEDMIIPRMLHNKVK----PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNL 589
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
++ +IKG D ++ G P+ ++TL+ G +
Sbjct: 590 FVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTD 649
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M E G+ P F ++ G G+ + AE+I
Sbjct: 650 MLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 681
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Query: 71 VCKLGS-CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+C G+ C DV + L+ + + G EA + + L+E+GH P Y ++ R+
Sbjct: 332 ICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQK 391
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
F S+++ G P+ ++ +I G +A +M E G P + F+
Sbjct: 392 HFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 451
Query: 190 LVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ G GK L E L++ LR
Sbjct: 452 TLIKGYGKIGK--LEESSRLLDMMLR 475
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
++G P + LV L + S +++K+ K G PD FN++I +SG ++
Sbjct: 370 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 429
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPI 121
++++ + + G ST+ LI K G ++E+ RLL ++ D P +
Sbjct: 430 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNIL 489
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMG 180
++ + + ++A+ +++ G P+ + TL R G A + ++ M
Sbjct: 490 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 549
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P R + +G GK + A
Sbjct: 550 VKPNVRTCGTIVNGYCEEGKMEEA 573
>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
Length = 817
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P ++ +VQ L +G + A Q +++M+K G PD+ T+++ + +CK GE
Sbjct: 533 MRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGE 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + ++ + DV + ILI KAG DEA ++ ++ G P Y
Sbjct: 593 TENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNL 652
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D A ++ + PP YT+L+ GR EA +M+E G
Sbjct: 653 MIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKG 712
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P + +GL CG+ + A
Sbjct: 713 CSPNEIAYTAFINGLCKCGRTETA 736
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S K + P V ++L+ G AG + A++++ +M+ +G P + T+N +I+ CKSG+
Sbjct: 603 ISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGK 662
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + Y + V TY L+ + AG DEA L + E G +P Y
Sbjct: 663 IDKAISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTA 722
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK 144
I G + G+ + A ++ E+K K
Sbjct: 723 FINGLCKCGRTETAVNYYEEMKTK 746
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIK---QGSD----------------PDLETFNSLIET 54
+++++GL N G +E+A Q+++ M++ +GSD P+ ++FN ++
Sbjct: 387 NVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCG 446
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+CK +++ + + + LG + + LI + + +DEA+ + + + + P
Sbjct: 447 LCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPS 506
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
Y + G RR A E++ H P T ++ GR EA +L
Sbjct: 507 EFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLD 566
Query: 175 EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
EM ++G P + +G+ G+ + A
Sbjct: 567 EMLKLGFLPDIVTYSAAMNGMCKIGETENA 596
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P + L G+ +A ++ +M P ++ +++ +C SG
Sbjct: 498 MKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGR 557
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + KLG D+ TY + + K G + A L ++ + P +
Sbjct: 558 ITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNI 617
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+FD+A E+ KG P+ Y +I + + G+ +A + + +M +
Sbjct: 618 LINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEE 677
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL N G+ D A
Sbjct: 678 KPPTVVTYTSLLDGLCNAGRPDEA 701
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 35/226 (15%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE------- 66
+++V GL L+ A + M+ G L FN LI +C S ++ E
Sbjct: 441 NIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKD 500
Query: 67 ------------MYYSVCK---LGSCADV------STYKILIPAVSK-------AGMIDE 98
++Y +C+ + AD+ S++K I ++ +G I E
Sbjct: 501 LDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITE 560
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A + L +++ G P Y+ + G + G+ ++A F +I K + P+ + LI
Sbjct: 561 ALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNILIN 620
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ G+F EA + EM GL P ++L+ D GK D A
Sbjct: 621 GFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKA 666
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 17/215 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + +LV G G ++ A M +KM G DL ++ LIE +C E
Sbjct: 268 MEALGMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNE 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLH-NLVEDGHNPFPSLYA 119
+ V++Y + + DV K +I A + G ++ N V LY
Sbjct: 328 MGKAVKLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYN 387
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I++G G+ + A S + G RG +++ ++E
Sbjct: 388 VILEGLTNHGEVEAASQLLSSMVRGGQ---------------RGSDDDTVGVHIVVISE- 431
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P S F++V GL K DLA + + V L
Sbjct: 432 DVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGL 466
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
NAG E A ++ +M ++ D L K G+VE VE+ + LG
Sbjct: 220 NAGRPEDASAVLQRMSERAW-VDEHVLTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEK 278
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
T +L+ ++ G +D A + + G + ++Y+ +I+G + A + ++
Sbjct: 279 TLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDM 338
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC--FDLVTDGLKNCG 199
K P+ + +I R G F ++ E + L P S ++++ +GL N G
Sbjct: 339 KRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINE-NAVHLKPGSAVLLYNVILEGLTNHG 397
Query: 200 KHDLAEKI 207
+ + A ++
Sbjct: 398 EVEAASQL 405
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P ++LV G AG + +A+++ KMI G PD+ TF SLI+ C+ G+V
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G + TY ILI A+ + +A LL L P P +Y P+I G
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ ++A E++ K P++ +T LI GR EA + +M +G +P
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++GL G E A +++ M G +PD+ T+N+LI+ CKS E+ EM+ V
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 74 LGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------------------- 113
C+ DV TY +I KAG + EA LL +++ G P
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 114 --------------FPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
FP + + +I G R GQ F + E+ +G PN Y+ LI
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLE 211
R ++A L ++ + P ++ V DG GK + A I E++E
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P R LV G L A ++ + + + NSL+ T+ K
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDR 186
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++++ + SC D T+ ILI + G ++A LL + G P Y
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+G + + + A F ++K P+ YT++I+ + G+ EA++ L +M +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
G+ P + F+++ DG G+ AE+I +S
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G AG + A +V +M K+ PD TF LI C G + V +++ + +G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRL 102
D T L+ + KAGM EA+ L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
>gi|15222753|ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g55630
gi|30793841|gb|AAP40373.1| unknown protein [Arabidopsis thaliana]
gi|30794021|gb|AAP40457.1| unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein [Arabidopsis thaliana]
gi|332195155|gb|AEE33276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+P + ++L+ L +A ++N M + G +P + F +LI+ + ++G+
Sbjct: 283 MVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E C K+G DV Y ++I G +++A + + E G P Y
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+F +A E++ +G PN VY+TL+ G+ +EA + +M E G
Sbjct: 403 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P V ++++ G + +++++M+K G PDL T+N L+ + +
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + ++G V + LI +S+AG ++ + V+ G P Y
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ + A F E+ KG PN Y ++I G+F EA L EM G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + LKN GK
Sbjct: 428 CNPNFVVYSTLVNNLKNAGK 447
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V L+ GL AG LE+ K +++ +K G PD+ + +I GE
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E EM+ + + G +V TY +I AG EA LL + G NP +Y+
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH 146
++ G+ +A ++ KGH
Sbjct: 438 LVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 2/202 (0%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
+ K FN P + ++ LL + + +M++ G PD+ T+N ++ +
Sbjct: 211 IKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRL 270
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+ + + + K G D+ TY IL+ ++ A LL+++ E G P +
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHF 330
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G R G+ + F E G P+ YT +IT GG +A EMTE
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 390
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
G P ++ + G GK
Sbjct: 391 KGQLPNVFTYNSMIRGFCMAGK 412
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
LL++ G ++ +++++MIK G TFN LI T ++G VE +
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTF 216
Query: 75 GSCADVSTYKILIPA---VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
+Y ++ + V + +ID + ++EDG P Y ++ FR G+
Sbjct: 217 NYRPYKHSYNAILHSLLGVKQYKLIDWVYE---QMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
D + E+ G P+ Y L+ G + + A N L M E+G+ P F +
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 192 TDGLKNCGK 200
DGL GK
Sbjct: 334 IDGLSRAGK 342
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 5/183 (2%)
Query: 29 AKQMVNKMIKQGS---DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
A+ +V + IK + P ++N+++ ++ + + +Y + + G DV TY I
Sbjct: 203 ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNI 262
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ A + G D +RLL +V+DG +P Y ++ + A + ++ G
Sbjct: 263 VMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG 322
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P +TTLI R G+ +EA Y M E ++G TP C+ ++ G + G+ + A
Sbjct: 323 VEPGVIHFTTLIDGLSRAGK-LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 205 EKI 207
E++
Sbjct: 382 EEM 384
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R + L+ L +G + ++ N MI G P + T+N +I+ +CK G++E +
Sbjct: 193 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 252
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + ++G DV TY LI K G ++E L + + + G P Y +I +
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ AF +FSE+K G PN Y+TLI + G A L +M GL P
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFT 372
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ + D NC +L E + L L++
Sbjct: 373 YTSLIDA--NCKAGNLTEAWKLLNDMLQA 399
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V + L+ G G LE + N+M G PD+ T+N LI CK +
Sbjct: 256 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + + G +V TY LI A K GM+ A +LL ++ G P Y
Sbjct: 316 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTS 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +A+ +++ G N YT L+ + GR +EA M + G
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++P + + + G + + A KI
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKI 462
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++++ L G LE+++++ +M + G PD+ T+NSLI+ K G
Sbjct: 221 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 280
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + +G D+ TY LI K + AF + +G P Y+
Sbjct: 281 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 340
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G A +++ G PN YT+LI + G EA L +M + G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + DGL G+ AE++
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEV 427
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ AG L A +++N M++ G ++ T+ +L++ +CK+G
Sbjct: 361 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGR 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ S+ K G + Y L+ KA +++A ++L + E P LY
Sbjct: 421 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGS 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + + ++ E+K +G N + TT+I + G+ +A N+ EM ++G
Sbjct: 481 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ + ++ DGL G +LA
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELA 564
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + + L+ + A + ++M G P++ T+++LI+ CK G
Sbjct: 291 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G + TY LI A KAG + EA++LL+++++ G Y
Sbjct: 351 MQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 410
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A F + G PN+ VYT L+ + R +A L +MTE
Sbjct: 411 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470
Query: 181 LTPISRCFDLVTDG---LKNCGKHDLAE 205
+ P DL+ G +C + L E
Sbjct: 471 IKP-----DLILYGSIIWGHCSQRKLEE 493
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ GL +ESAK++ ++M +G PD+ F +LI+ K G
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 630
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + +L D+ Y L+ S+ G + +A + + ++E G P L
Sbjct: 631 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 690
Query: 121 IIKGAFRRGQFDDA 134
+++ ++RGQ D+A
Sbjct: 691 LLREYYKRGQLDEA 704
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D+L + G LE A + ++M + P + N L+ + KSG + + + +
Sbjct: 164 DVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIG 223
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY ++I + K G ++ + RL + E G +P Y +I G + G ++
Sbjct: 224 AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEE 283
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F+E+K G P+ Y LI + + A Y EM GL P + + D
Sbjct: 284 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 343
Query: 194 GL 195
Sbjct: 344 AF 345
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 14 DLLVQGLLNAGY-----LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
DL++ G + G+ LE K ++ +M +G + ++I+ K+G+ + +
Sbjct: 474 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 533
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ +G A + TY +LI + +AG+++ A ++ G P ++Y +I G
Sbjct: 534 QEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXN 593
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
+ A F E++ +G P+ +T LI + G EA + MTE+ + +
Sbjct: 594 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 653
Query: 189 DLVTDGLKNCGKHDLAEK 206
+ G CG+ A K
Sbjct: 654 TSLVSGFSQCGELHQARK 671
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 100/200 (50%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P +++V+G L G A ++ ++M+++ P + T+NSLI +C+ G+++
Sbjct: 170 GFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKA 229
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G A+ TY +L+ + +EA +L+ ++ G P + ++
Sbjct: 230 MALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMND 289
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+RG+ ++A E+K + P+ Y LI + G+ +EA L+EM G P
Sbjct: 290 LGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPN 349
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + +V DGL G ++A
Sbjct: 350 AATYRMVVDGLCQIGDFEVA 369
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 73/175 (41%)
Query: 33 VNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSK 92
V ++ D +++ S+ + + E VE++ + + + ++ L+ +
Sbjct: 93 VETILAHMKDTEMQCRESVFIALFQHYGPEKAVELFNRMPQFNCTRTIQSFNALLNVLID 152
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
DEA + E G P + ++KG +G++ A F E+ K P+
Sbjct: 153 NDRFDEANDIFGKSYEMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVT 212
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y +LI R G +A L +M + G + L+ +GL + K + A+K+
Sbjct: 213 YNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKL 267
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF V ++L+ G + A+++ +++ K+ P + +FN+LI CK G ++
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLD 292
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + K + DV TY LI A+ K +D A RL + + E G P ++ +I
Sbjct: 293 VGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLI 352
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R GQ D + ++ KG P+ +Y TL+ + G V A N + M GL
Sbjct: 353 HGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + DG G D A +I +
Sbjct: 413 PDKVTYTTLIDGFCRGGDVDTALEIRK 439
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + LV G G L +A+ +V+ MI++G PD T+ +LI+ C+ G+
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGD 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+ + + G D + LI + K G + +A R L ++ G P Y
Sbjct: 431 VDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTM 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++G F E++ GH PN Y L+ + G+ A L M +G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVG 550
Query: 181 LTPISRCFDLVTDGLK---NCGKH 201
+ P ++ + +G N KH
Sbjct: 551 VVPDDITYNTLLEGHHRHANASKH 574
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ + P V + L+ G G L+ ++ + M K + PD+ T+++LI +CK +
Sbjct: 266 ITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENK 325
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++Y +C+ G + + LI S+ G ID ++ G P LY
Sbjct: 326 MDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G A + +G P++ YTTLI RGG A EM + G
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNG 445
Query: 181 L 181
+
Sbjct: 446 I 446
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
F P+RG L+ ++ + +++ G ++ FN L+ CK G +
Sbjct: 200 NFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDA 259
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + K V ++ LI K G +D FRL H++ + P Y+ +I
Sbjct: 260 QKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINA 319
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + D A F E+ +G PN ++TTLI R G+ +M GL P
Sbjct: 320 LCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPD 379
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
++ + +G C DL
Sbjct: 380 IVLYNTLVNGF--CKNGDLV 397
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF+P + + L+ G L+ A + M ++G PDL ++ +L+ +CK G
Sbjct: 329 MEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGR 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++++ + G D+ TY LI K G + E+ LLH+++ +G +P
Sbjct: 389 VREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWV 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + G+F A E++ G ++ +Y+ LI R R A N L M++ G
Sbjct: 449 LVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDG 508
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L L G + + KM ++G DPD+ T+N+LI + C+ G
Sbjct: 294 MERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGR 353
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y + + G D+ +Y L+ + K G + EA +L H +V G +P Y
Sbjct: 354 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 413
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++ ++ G P+ L+ G+ G+F+ A N ++E+ G
Sbjct: 414 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 473
Query: 181 LT 182
++
Sbjct: 474 VS 475
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P V + L+ GLL Y + ++ +M + G P+L TFN L +CK G+
Sbjct: 263 GFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKV 322
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G D+ TY LI + + G +D+AF L + G P Y ++ G
Sbjct: 323 NKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNG 382
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ +A F + +G P+ Y TLI + G+ E+ + L +M G++P
Sbjct: 383 LCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 442
Query: 185 SRCFDLVTDGLKNCGK 200
S ++ +G GK
Sbjct: 443 SFTCWVLVEGYGKEGK 458
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D ++P V D+LV+ L G + + +M++ G P + T N L+ + K +
Sbjct: 228 DCNWDPVVF--DMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTD 285
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
C E+Y + + G ++ T+ IL + K G + + L + E+G +P Y +I
Sbjct: 286 RCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLI 345
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
R+G+ DDAF + + +G P+ YT L+ + GR EA M GL+
Sbjct: 346 NSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLS 405
Query: 183 PISRCFDLVTDGLKNCGK 200
P ++ + G GK
Sbjct: 406 PDIVTYNTLIHGYCKEGK 423
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ GL G + A Q+ ++M+ +G PD+ T+N+LI CK G+
Sbjct: 364 MYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGK 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D T +L+ K G A L+ L G + +Y+
Sbjct: 424 MQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R + A + GH +Y LI + EA MEM +
Sbjct: 484 LIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKE 543
Query: 181 LTP 183
+ P
Sbjct: 544 IKP 546
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + + L+ G G ++ ++ +++ MI G PD T L+E K G+
Sbjct: 399 MVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGK 458
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G Y LI A+ + A LL + +DGH +Y
Sbjct: 459 FLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNE 518
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + +A E+ K PN Y +J R R +E + + EM G
Sbjct: 519 LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASG 578
Query: 181 LTP 183
P
Sbjct: 579 XLP 581
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 52/134 (38%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DK P + ++ L + +V +M+ G PDLE +L C+ +
Sbjct: 539 MVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCREND 598
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + K D ++ LI S G I + + +++ G P P
Sbjct: 599 IDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKY 658
Query: 121 IIKGAFRRGQFDDA 134
+I G ++ + D A
Sbjct: 659 VIDGLWKARRVDSA 672
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G++E A ++VN+M++ G P+L TFN+L++ I K E +E+ + +
Sbjct: 492 NVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS 551
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY ++ +S+ +EA ++LH + + G P +Y I+ +R + D
Sbjct: 552 KGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQ 611
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
A FF+ + G PN Y LI G EA L E+ G+
Sbjct: 612 AIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL + G + A +++ M+++G P + T+ L+E +CKS + + + G
Sbjct: 147 IIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG 206
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY ++I + + G +D+A +L+ L G P Y ++KG ++DD
Sbjct: 207 CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK 266
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ K PN + L+ RGG A L +M++ G TP + ++V + +
Sbjct: 267 VLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 326
Query: 196 KNCGKHDLA 204
G+ D A
Sbjct: 327 CKQGRVDDA 335
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF P + +++GL A + K + +M+ + P+ TF+ L+ C+ G
Sbjct: 237 LSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGM 296
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ + + G + + I+I A+ K G +D+A+ L+N+ G NP Y
Sbjct: 297 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 356
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+++ A E+ K PPN + T I + + G +A + M E G
Sbjct: 357 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 416
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ ++ + G G+ D A
Sbjct: 417 CSVGIVTYNALVHGFCVQGRVDSA 440
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A ++V +G PD+ LI +C+ G + + G+ DV Y
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---LYAPIIKGAFRRGQFDDAFCFFSEIK 142
L+ + G +D A RL+ ++ P P Y PII+G RG+ DA ++
Sbjct: 115 LVAGYCRYGRLDAARRLIASM------PVPPDAYTYTPIIRGLCDRGRVGDALALLDDML 168
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
+G P+ YT L+ + F EA N L EM G TP ++++ +G+ G+ D
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228
Query: 203 LAEKI 207
A++I
Sbjct: 229 DAKEI 233
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 4/207 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G NP +++GL AG E AK+++ +M+++ P+ TFN+ I +C+ G +E
Sbjct: 346 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 405
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G + TY L+ G +D A L +NL + P Y ++ G
Sbjct: 406 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTG 462
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D A + + K P N + L++ + G EA + +M E G TP
Sbjct: 463 LCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPN 522
Query: 185 SRCFDLVTDGL-KNCGKHDLAEKIEQL 210
F+ + DG+ K+C + E + L
Sbjct: 523 LITFNTLLDGITKDCNSEEALELLHGL 549
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V +L++ + + A ++++M +G P++ T+N +I +C+ G
Sbjct: 167 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 226
Query: 61 VEFCVEMY--------------YSVCKLGSCA-----DVS----------------TYKI 85
V+ E+ Y+ G CA DV T+ +
Sbjct: 227 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + GM++ A ++L + + G P +L +I ++G+ DDA+ F + + + G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
P+ YTT++ R GR+ A L EM P F+
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 3/178 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV G G L++A++++ M PD T+ +I +C G V + + + +
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY +L+ AV K+ EA +L + G P Y II G R G+ DD
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A + + G P+ YTT++ R+ + EM + P FD++
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 287
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++ + G ++ A +N M G +PD ++ +++ +C++G
Sbjct: 307 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 366
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + + T+ I + + G+I++A +L+ + E G + Y
Sbjct: 367 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNA 426
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G +G+ D A F+ + + PN YTTL+T R AA L M +
Sbjct: 427 LVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQ 481
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL +A L++A +++ MI++ + TFN L+ C+ G VE +E+ + + G
Sbjct: 459 LLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 518
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ T+ L+ ++K +EA LLH LV G + Y+ ++ R + ++A
Sbjct: 519 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 578
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G P +Y ++ + +A ++ M G P + ++ +GL
Sbjct: 579 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638
Query: 196 KNCG 199
+ G
Sbjct: 639 AHEG 642
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G+ E A ++++ ++ +G D T++S+++ + +
Sbjct: 514 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 573
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++M ++V +G V Y ++ A+ K D+A +V +G P S Y
Sbjct: 574 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYII 633
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G G +A SE+ KG
Sbjct: 634 LIEGLAHEGLLKEARYVLSELYAKG 658
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ +P + + +V G G + A+ +K+++ G PD T+ SLI C++ V+
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E++ + + G + +Y LI + +AG I+EA +L ++ ED P Y +I
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G+ +A F+E+K KG PN YT LI + + EA L EM+E GL
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P ++ + DG G D A +I L
Sbjct: 367 PSVVTYNALIDGYCKEGMIDDAFEILDL 394
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P + + L+ G LESA ++++ M + G PD T++ I+T+CK G
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ SV G A+ Y LI K G ID A+ LL ++ D P Y
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + + +A +++ G P YT LI + G F A M +G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 181 LTP 183
P
Sbjct: 610 YQP 612
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P R + L+ GL + A ++NKM+++ P L T+NSLI CK +
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G D TY + I + K G ++EA L ++ G +Y
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A+ + PN Y LI + + EA++ + +M MG
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + ++ + G D A K+ VSL
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P V + L+ G G ++ A ++++ M P+ T+N LI +CK +
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + + + TY LI K ++ A+RLL + E+G P Y+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ ++A F +K KG N +YT LI + G+ A + L M
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 181 LTPISRCFDLVTDGL 195
P S ++++ +GL
Sbjct: 540 CLPNSYTYNVLIEGL 554
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ P VR +L+ L +G A + N+M ++G +P++ T+ LI+ +CK +
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M + + G V TY LI K GMID+AF +L + + P Y
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ + A +++ + P+ Y +LI + A L M E G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + D L G+
Sbjct: 470 LVPDQWTYSVFIDTLCKEGR 489
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +R + ++ L ++ K + +++ P++ TFN+++ CK G V
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNV-VEA 213
Query: 66 EMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y S + + G D TY LI + +D A+ + + + G Y +I G
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ ++A F+++ P YT LI GR VEA N EM E G P
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ DGL K D A K+
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKM 356
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+ P+ T+N LIE +CK +++ + + +G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY ILI + K G D A ++ +++V G+ P Y + F +G ++
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+++ +G P+ YT LI R G A ++L M + G P
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 18/225 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P V + + G LE ++ KM ++G PDL T+ LI+ + G
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE------------------AFRL 102
+ + G + ILI +S + E A +L
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKL 724
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+VE G S+Y +I G ++ + ++A +K +G P+ +Y +L+ C +
Sbjct: 725 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 784
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G + EA + M E GL P+ + L+ GL G ++ A+ +
Sbjct: 785 LGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 829
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG + A ++ M + P + T+ LI + SG + ++ + + G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY +LI + K +DEA ++L + E G P Y +I G + G DDAF
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ PN Y LI + + +A L +M E L+P ++ + G
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG- 448
Query: 196 KNCGKHDL 203
C +DL
Sbjct: 449 -QCKVNDL 455
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P + + L G +E A + + + +G + + +LI+ CK G+
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + TY +LI + K + EA L+ ++ G P Y
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G FD A F+ + G+ P+ YT + G E + + +M E G
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P + ++ DG G
Sbjct: 645 ILPDLVTYTVLIDGYARLG 663
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P L+ G +++A ++ M ++G + ++ +LI +C++G +
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + + C V TY +LI A+S +G EA L + + E G P Y +I G
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDG 343
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + D+A SE+ KG P+ Y LI + G +A L M P
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403
Query: 185 SRCFDLVTDGL 195
+R ++ + GL
Sbjct: 404 TRTYNELICGL 414
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++L++GL ++ A +V KM+ G P + T+ LI + K G + +++
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + LG DV TY + A GM++E ++ + E+G P Y +I G R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G AF F + G P+ + + LI R E +E+G+ +S
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR------SEIGIDSVSNT 715
Query: 188 FD 189
+
Sbjct: 716 LE 717
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 14 DLLVQGLLNAGY-----LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
D+ + G L AG+ LE A+ +V+ M ++G P + +NSL++ CK G V +
Sbjct: 736 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 795
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
++ + G + +YK+L+ + G ++A + H L+ G+N + +I G +R
Sbjct: 796 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKR 855
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
D+ ++ KG PN Y+ LI
Sbjct: 856 DLVDECSELIDIMEEKGCQPNPLTYSLLI 884
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P + L+ G A ++V+ M++ G P LE++ L+ + G
Sbjct: 763 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 822
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + G D +K+LI + K ++DE L+ + E G P P Y+
Sbjct: 823 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSL 882
Query: 121 IIKGAFR 127
+I+G R
Sbjct: 883 LIEGLER 889
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G + ++ AK ++ +M ++ P+ T+N+L++ +C +
Sbjct: 252 MVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASS 311
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ +C G ++ TY IL+ + K G ++EA +LL ++ E P LY
Sbjct: 312 LLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNI 371
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G F G+ + A FS++ G P+ Y +I + G EA +M + G
Sbjct: 372 LIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDG 431
Query: 181 LTPISRCFDLVTDGL 195
P S ++++ G
Sbjct: 432 FLPDSCSYNVIIQGF 446
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ L ++ A +++KM K G PD TF +LI +C G ++ VE++ +
Sbjct: 125 NILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAG 184
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ + T+ IL+ + K GM+ EA + + E G P Y ++ G R + +D
Sbjct: 185 RDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMND 244
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F + KG P+ Y+ LI + R EA L +M+E L P + ++ +
Sbjct: 245 ASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQ 304
Query: 194 GLKNCGKHDLAEKIE 208
GL C L E E
Sbjct: 305 GL--CHASSLLEAQE 317
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 2/206 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L+ GL N G ++ A ++ N+M + + P+ TF L++ +CK G V
Sbjct: 151 GIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEA 210
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ ++ + G ++ TY L+ +++A ++ +V G P Y+ +I G
Sbjct: 211 RCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILING 270
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + D+A +++ K PN Y TL+ +EA +M G+ P
Sbjct: 271 YCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPN 330
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQL 210
R + ++ DGL C L E ++ L
Sbjct: 331 LRTYSILLDGL--CKHGHLEEALKLL 354
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ + P +LV L G + A+ + M ++G +P++ T+N+L+ C E
Sbjct: 182 MAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLE 241
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G V +Y ILI K+ IDEA LL + E P Y
Sbjct: 242 MNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G +A F ++ G PN Y+ L+ + G EA L M E
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK 361
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++++ G+ GK ++A+++
Sbjct: 362 LEPDIVLYNILIQGMFIAGKLEVAKEL 388
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + ++L+QG+ AG LE AK++ +K+ G P + T+N +I+ + K G
Sbjct: 357 MQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGL 416
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+ +++ + G D +Y ++I + A +L+ +V
Sbjct: 417 SDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMV 463
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 64/160 (40%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
+MI P + +I K + V + + G + T ILI ++ +
Sbjct: 76 RMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLS 135
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
I A +L + + G P + +I G G+ +A F+E+ + PN +T
Sbjct: 136 HIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFT 195
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
L+ + + G EA MTE G+ P ++ + +G
Sbjct: 196 ILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P VR +++++GLL G + A ++ KM G PD ++N +I+ ++ +
Sbjct: 396 GIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTA 455
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
+++ + AD ST+K+L+ S +I R
Sbjct: 456 IQLIDEMVGRRFSADSSTFKMLLDLESHDEIISRFMR 492
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + L+ A + A +++ +M + G P + T+NSLI + K G
Sbjct: 269 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + G DV TY LI + +AG ID A +V +G P Y
Sbjct: 329 LEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNA 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK RG+F + F E + G P+ + TL+ + G+ G E + EM + G
Sbjct: 389 LIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAG 448
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + CG DLA +I
Sbjct: 449 YIPERDTYVSLISSYSRCGLFDLAMQI 475
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ + A Q+ ++M G +PD TFNSL++ K+
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + ++G V TY LI + K G++++A L + G P Y
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTT 353
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ D A + E+ G PN Y LI M G G+F E E G
Sbjct: 354 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAG 413
Query: 181 LTPISRCFDLVT 192
P D+VT
Sbjct: 414 FVP-----DIVT 420
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ GL AG +++A ++M++ G P+L T+N+LI+ G+
Sbjct: 339 MEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGK 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ G D+ T+ L+ + G+ E + + + G+ P Y
Sbjct: 399 FPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVS 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G FD A + + G P+ Y +++ RGGR+ +A EM E
Sbjct: 459 LISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERD 518
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
P + + N + D
Sbjct: 519 CKPDEYSYSSLLHAYANAKRLD 540
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 1/203 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG-EV 61
D P LV AG A + +M+ G P + T+N ++ K
Sbjct: 165 DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPW 224
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ VE+ S+ + G D TY LI + + EA ++ + G P + +
Sbjct: 225 KEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 284
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + + D+A E++ G PP+ Y +LI+ + G +A EM G+
Sbjct: 285 LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM 344
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P + + GL GK D A
Sbjct: 345 KPDVVTYTTLISGLDRAGKIDAA 367
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGY-LESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M D G P + ++++ + ++V M + G PD T+N+LI +
Sbjct: 198 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 257
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ +++ + G D T+ L+ KA DEA ++ + G P Y
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G + A E+++KG P+ YTTLI+ R G+ A EM
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377
Query: 180 GLTP 183
G P
Sbjct: 378 GCKP 381
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG-QFDDAFCF 137
D Y L+ A S+AG +A + +V+ G P Y ++ + + +
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 230
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
+ +K G P+R Y TLI+ C R + EAA EM G P F+ + D
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 198 CGKHDLA-EKIEQLE 211
+HD A E I+++E
Sbjct: 291 ARRHDEAIEVIQEME 305
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + + L+ G + +M K G P+ +T+ SLI + + G +
Sbjct: 413 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 472
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++Y + + G DVSTY ++ A+++ G ++A +L + E P Y+ ++
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D +I + P+ + TL+ + + EA +E+ +
Sbjct: 533 YANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQ------ 586
Query: 185 SRC---FDLVTDGLKNCGKHDLAEKIEQL 210
RC +++ + GK+ + K+E++
Sbjct: 587 KRCSLDINVLNAMVSIYGKNRMVRKVEKI 615
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + N + L+ G E + ++ ++ G PD ++N++I + G+
Sbjct: 619 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 678
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G DV TY I + + M +EA L+ +V G P Y
Sbjct: 679 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP 147
I++G R G+ DA F S + + HP
Sbjct: 739 IVEGYCRNGKLTDAKIFVSNLP-QLHP 764
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T+NSL+ + G+ E C + + G D +Y +I A + G + EA RL +
Sbjct: 630 TYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 689
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G P Y +K F++A + +G PN Y +++ R G+
Sbjct: 690 KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Query: 167 VEAANYLMEMTEM 179
+A ++ + ++
Sbjct: 750 TDAKIFVSNLPQL 762
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 6/205 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLL----NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC 56
+SD ++ + + LV+ L+ L A++ ++ ++ D+ N+++
Sbjct: 545 LSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYG 604
Query: 57 KSGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
K+ V VE S+ K + +TY L+ S+ G ++ +L + G P
Sbjct: 605 KNRMVR-KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDR 663
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y +I R+GQ +A FSE+K G P+ Y + F EA +
Sbjct: 664 YSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRY 723
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGK 200
M G P R ++ + +G GK
Sbjct: 724 MVTQGCKPNERTYNSIVEGYCRNGK 748
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P L+ G + A Q+ +M++ G PD+ T+N+++ + + G
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + D +Y L+ A + A +D+ L ++ + P L
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMTE 178
++ + +A F E++ K + V ++++ G R R VE LM+ +
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 623
Query: 179 MGLT 182
+ L+
Sbjct: 624 INLS 627
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YMP 414
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 200 MLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGR 259
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+F +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 260 VDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 319
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + Y LI+ + GR V+A L EM +G
Sbjct: 320 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVG 379
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 380 LKPDTGTYTMIINEF--CKKGDVWK 402
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G+L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 165 ITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESK 224
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 225 MDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNT 284
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 285 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 344
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 345 IRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLK 381
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 110 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 169
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 170 LRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDAN 229
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A M L P ++ + GL
Sbjct: 230 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGL 289
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 290 --CKKGDLKQ 297
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 238 KGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQ 297
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ YA +I
Sbjct: 298 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALIS 357
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 358 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAP 417
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 418 SVVTYNVLMNG 428
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G ++
Sbjct: 134 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEG 193
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 194 FRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 253
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + + + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 254 HCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 313
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 314 KFTYTTLIDGC--CKEGDLDTAFEH 336
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 270 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 329
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 330 LDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 389
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 390 IINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 426
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 305 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGR 364
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + +GH P Y
Sbjct: 365 SVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNV 424
Query: 121 IIKG 124
++ G
Sbjct: 425 LMNG 428
>gi|387219669|gb|AFJ69543.1| hypothetical protein NGATSA_2036000, partial [Nannochloropsis
gaditana CCMP526]
gi|422292844|gb|EKU20146.1| hypothetical protein NGA_2036000, partial [Nannochloropsis gaditana
CCMP526]
Length = 632
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
N G E A ++ +M ++G P+ T++S I+ ++G+ E ++ + + G +
Sbjct: 224 NGGAWEMALMLMRRMEEEGIAPNSYTYSSAIKACSRAGKWEQASALFTEMQERGLPQNEV 283
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY +++ A +KAG + EA L + + G +P Y I R G++ A +F E+
Sbjct: 284 TYTVILNAHAKAGRLQEAAACLEGMKKRGLSPSTPHYTAAIDACSRSGEYQQALRWFEEM 343
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR-CFDLVTDGLKNCGK 200
K + P NR Y+ I +CG+GG + +A L++M S C+ L D + +
Sbjct: 344 KNEKVPINRMTYSATIAVCGKGGAWEQAVRVLLDMMLTSRDGSSHVCYMLAVDACRRSDQ 403
Query: 201 HDLAEKIEQL 210
+A + L
Sbjct: 404 WPVAAYLWDL 413
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 7/203 (3%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
P + +++ A +E A ++ MI +G + L+ + ++G+ +
Sbjct: 137 LKPQAQTYSQVIEAATRADMVEEALKLFQTMIAEGFPAGDKECTDLMAALARNGDWSRAL 196
Query: 66 EMYYSV----CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++ + + +C Y + A G + A L+ + E+G P Y+
Sbjct: 197 DLLQDIRVYTKRPPACI---VYTAAVNACGNGGAWEMALMLMRRMEEEGIAPNSYTYSSA 253
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
IK R G+++ A F+E++ +G P N YT ++ + GR EAA L M + GL
Sbjct: 254 IKACSRAGKWEQASALFTEMQERGLPQNEVTYTVILNAHAKAGRLQEAAACLEGMKKRGL 313
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
+P + + D G++ A
Sbjct: 314 SPSTPHYTAAIDACSRSGEYQQA 336
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
TY +I A ++A M++EA +L ++ +G ++ R G + A
Sbjct: 141 AQTYSQVIEAATRADMVEEALKLFQTMIAEGFPAGDKECTDLMAALARNGDWSRALDLLQ 200
Query: 140 EIKI-KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
+I++ PP VYT + CG GG + A + M E G+ P S +
Sbjct: 201 DIRVYTKRPPACIVYTAAVNACGNGGAWEMALMLMRRMEEEGIAPNSYTYSSAIKACSRA 260
Query: 199 GKHDLAEKI 207
GK + A +
Sbjct: 261 GKWEQASAL 269
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+ + + G E + + + + G + TY I A S+AG ++A L +
Sbjct: 215 YTAAVNACGNGGAWEMALMLMRRMEEEGIAPNSYTYSSAIKACSRAGKWEQASALFTEMQ 274
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
E G Y I+ + G+ +A +K +G P+ P YT I C R G +
Sbjct: 275 ERGLPQNEVTYTVILNAHAKAGRLQEAAACLEGMKKRGLSPSTPHYTAAIDACSRSGEYQ 334
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
+A + EM + PI+R T + CGK
Sbjct: 335 QALRWFEEMKNEKV-PINRMTYSATIAV--CGK 364
>gi|302816300|ref|XP_002989829.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
gi|300142395|gb|EFJ09096.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
Length = 331
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P LV+G G+L+ +++ +M++ G P+L TFN++IE +CK
Sbjct: 149 MIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGLCKVRR 208
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + G D +T++ L+ A+ K +DEA R + ++ G P Y+
Sbjct: 209 VENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIATGCLPDTVTYSF 268
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK + G+ +A FF E+ G P+ +Y L+ + +M E G
Sbjct: 269 LIKKLCKEGRPMEAHRFFKEMIGIGREPDSSIYNLLLASHCAASKATACYELFTQMKERG 328
Query: 181 LTP 183
+ P
Sbjct: 329 VLP 331
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+ V + +++GL+ A ++ A KM ++ D DLE+++ ++ +C
Sbjct: 46 MEKMGFHIDVGLHNAIIRGLIRAKRVDDALDHFAKM-EKNRDTDLESYSIVVSALCDEKR 104
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V++ YS+ + DV Y +I A+S+ + A+ L ++E G P + ++
Sbjct: 105 VDKAVDLLYSMNEESFLPDVGIYNRIIEAMSEL-QLHGAYLLFEQMIEAGVLPNSATFSF 163
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLM-EMTE 178
+++G F+RG D+ ++ G P + +I +C R VE A ++M EM
Sbjct: 164 LVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGLC--KVRRVENARWVMNEMAS 221
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G +P + + + L K D A + Q
Sbjct: 222 QGCSPDAATHRFLLEALCKMDKLDEAHRHVQ 252
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+G G ++ A +++ +M K G D+ N++I + ++ V+ ++ + + K
Sbjct: 26 MVEGYCYVGDMDPATRILAQMEKMGFHIDVGLHNAIIRGLIRAKRVDDALDHFAKMEK-N 84
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ +Y I++ A+ +D+A LL+++ E+ P +Y II+ A Q A+
Sbjct: 85 RDTDLESYSIVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIE-AMSELQLHGAY 143
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ G PN ++ L+ C + G E + L +M E G P F+ V +GL
Sbjct: 144 LLFEQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGL 203
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
YK ++ G +D A R+L + + G + L+ II+G R + DDA F+++
Sbjct: 22 AYKTMVEGYCYVGDMDPATRILAQMEKMGFHIDVGLHNAIIRGLIRAKRVDDALDHFAKM 81
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ K + Y+ +++ R +A + L M E P ++ + + + H
Sbjct: 82 E-KNRDTDLESYSIVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMSELQLH 140
Query: 202 DLAEKIEQL 210
EQ+
Sbjct: 141 GAYLLFEQM 149
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P D L+ G AG L+ A+++ M++ G DP++ T++SLI+ + K
Sbjct: 405 MSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKR 464
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + +V Y +I + K G DEA++L+ + E G NP Y
Sbjct: 465 LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTA 524
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + G+ + ++ KG PN Y LI C G EA L EM +
Sbjct: 525 MIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V LV GL A ++ A+ ++ M +G +P+ +++LI+ CK+G+++ E+
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ + G +V TY LI + K +D A ++L ++E+ P +Y +I G +
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A+ ++ KG PN YT +I G+ GR + L +M+ G P
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ ++ + + G D A K+
Sbjct: 557 YRVLINHCCSTGLLDEAHKL 576
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ L + + A ++ M+ +G P++ T+ +LI+ +CK+G+
Sbjct: 283 MERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGK 342
Query: 61 VEFC----------------VEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLL 103
+E V+M++ V S +V TY L+ + KA + EA LL
Sbjct: 343 IEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLL 402
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
++ +G P +Y +I G + G+ D+A F+ + G+ PN Y++LI +
Sbjct: 403 KSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKD 462
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
R A L +M E P + + DGL GK D A K+
Sbjct: 463 KRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ-----------------GSDP 43
M KG P + L+ GL AG +E A Q+ M K+ ++P
Sbjct: 318 MLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEP 377
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
++ T+ +L++ +CK+ +V+ ++ S+ G + Y LI KAG +DEA +
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
++E G++P Y+ +I F+ + D A S++ PN +YT +I +
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
G+ EA ++ M E G P + + DG G+
Sbjct: 498 GKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGR 534
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 103/259 (39%), Gaps = 52/259 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P ++ L NA +E A Q+ +M + G PD+ + +LI++ CK+G
Sbjct: 213 MMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGF 272
Query: 61 VEF------------CV-----------------------EMYYSVCKLGSCADVSTYKI 85
+E C E+Y + G ++ TY
Sbjct: 273 IEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTA 332
Query: 86 LIPAVSKAGMIDEAFRL---------------LHNLVEDGHNPFPSL--YAPIIKGAFRR 128
LI + KAG I++A ++ +H V DG + P++ Y ++ G +
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKA 392
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
Q +A + ++G PN VY LI C + G+ EA M E G P +
Sbjct: 393 YQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTY 452
Query: 189 DLVTDGLKNCGKHDLAEKI 207
+ D L + DLA K+
Sbjct: 453 SSLIDRLFKDKRLDLALKV 471
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 84/216 (38%), Gaps = 40/216 (18%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L+ G LN L K++++ MI +G P FNSL+ C+SG+ + ++
Sbjct: 75 PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKL 134
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKA---------------------------------- 93
+ + G Y ILI + +
Sbjct: 135 LKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS 194
Query: 94 ------GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
G ++A+ ++ ++ G P S Y+ +I + + AF F E+K G
Sbjct: 195 RCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIA 254
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
P+ VYTTLI + G +A N+ EM G P
Sbjct: 255 PDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAP 290
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%)
Query: 20 LLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
L G E A ++ +M+ +G PD T++ +I +C + +VE +++ + + G D
Sbjct: 197 LCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPD 256
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
V Y LI + KAG I++A + DG P Y +I + + A +
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN 171
+ KG PN YT LI + G+ +A+
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQ 348
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 41 SDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG--SCADVSTYKILIPAVSKAGMIDE 98
S P + LI+ K+G +E +E+ + S A+ + + LI +S A D+
Sbjct: 618 SVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADK 677
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
AF L +++ G P S+ +IKG R ++++A I
Sbjct: 678 AFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFR 101
PD + +I +C++ E ++ + + + SC +V TY+IL+ + R
Sbjct: 40 PDTVLYTKMISGLCEASLFEEAMD-FLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKR 98
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+L ++ +G P P ++ ++ R G + A+ ++ G P VY LI
Sbjct: 99 ILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILI 154
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G G ++ A ++ KMI+Q PD+ T+NSLI+ +CK+ E+
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G + TY LI S AGM E+ R+ + G P I
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R + +A F + +KG PN Y+TL+ G F + + M G+ P
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
R F+++ + CG D A
Sbjct: 332 HRFFNILINAYARCGMMDKA 351
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + L+ G G + +VN M+ +G P+ FN LI + G
Sbjct: 288 MVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGM 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G D T+ +I ++ + G +D+A +++V+ G P ++Y
Sbjct: 348 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRC 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG-HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+G G+ A SE+ K PP ++++I + GR E + + M +
Sbjct: 408 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQT 467
Query: 180 GLTPISRCFDLVTDG 194
G P F+ + +G
Sbjct: 468 GQRPNVVTFNSLMEG 482
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M +K PP V+ ++ L G + K +++ M++ G P++ TFNSL+E C G
Sbjct: 428 MMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG 487
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E + ++ +G + Y L+ K G ID+A + +++ G P LY
Sbjct: 488 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYN 547
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ G F+ + A F E+ G + Y ++ R EA L ++ M
Sbjct: 548 IILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAM 607
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ F++V + G+ A+++
Sbjct: 608 NVKFDIITFNIVISAMLKVGRRQEAKEL 635
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 36/243 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P R ++L+ G ++ A + M +G PD TF ++I ++C+ G
Sbjct: 323 MVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 382
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILI--------------------------PAVS--- 91
++ + + + +G + Y+ LI P V
Sbjct: 383 LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 442
Query: 92 -------KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIK 144
K G + E ++ +V+ G P + +++G G ++AF +
Sbjct: 443 SIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 502
Query: 145 GHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
G PN +Y TL+ + GR +A +M G+ P S ++++ GL + A
Sbjct: 503 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562
Query: 205 EKI 207
+K+
Sbjct: 563 KKM 565
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + T+N LI+ + E + ++ + + G DV +Y LI SK G +D+A+ L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ ++E +P Y +I G + + + ++ G PN Y +LI
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239
Query: 163 GGRFVEAANYLMEMTEMGLTP 183
G + E+ EM+ GL P
Sbjct: 240 AGMWKESVRVFKEMSSSGLIP 260
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P V + L+ GL + +++++ +M+ G P+ +T+NSLI +G
Sbjct: 183 MIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGM 242
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V ++ + G V I A+ + I EA + ++V G P Y+
Sbjct: 243 WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYST 302
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G F + + + KG PN + LI R G +A +M G
Sbjct: 303 LLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKG 362
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P + F V L G+ D A
Sbjct: 363 MIPDTVTFATVISSLCRIGRLDDA 386
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 68/165 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G ++ +++ GL + A ++ K+ D+ TFN +I + K G
Sbjct: 569 MIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGR 628
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ ++ G V TY ++I + K +EA L ++ + G P L
Sbjct: 629 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 688
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
I++ ++ + A + S I + L ++ R G+
Sbjct: 689 IVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGK 733
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
+ TY ILI + + A + L+ G P Y +I G + G+ D A+ F
Sbjct: 122 IYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFY 181
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
++ + P+ Y +LI + V++ L +M + G+ P ++ ++ + G G
Sbjct: 182 KMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAG 241
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 54/261 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + +L+ +L G + AK+M N+M G P T+ I + CK G
Sbjct: 660 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 719
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF-------------------- 100
+E ++ + + G DV TY ILI G ID AF
Sbjct: 720 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCL 779
Query: 101 -------------------------------RLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+LL +V+ G NP + Y+ +I G + G
Sbjct: 780 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 839
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A + KG PN +YT LI C F +A +++ M+E G P +
Sbjct: 840 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 899
Query: 190 LVTDGLKNCGKHDLAEKIEQL 210
L+ GL N G EK++ L
Sbjct: 900 LLVVGLCNEGDF---EKVKSL 917
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ L+ AK+++N++ G P++ T+ S+I+ CKSG+V+ +E+ + + G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY L+ + K + +A LL + +DG P Y +++G FD+AF
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ G P+ Y L + GR EA ++++ + LT + + + DG
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR-KGVALTKVY--YTTLIDGF 609
Query: 196 KNCGKHDLAEKI 207
G D A +
Sbjct: 610 SKAGNTDFAATL 621
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P V L+ G A + A +M NKM+ DL+ F LI ++ K ++
Sbjct: 386 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKE 445
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + G +V TY +I K+G +D A +L + DG P Y ++
Sbjct: 446 AKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMY 505
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + A ++++ G PN YTTL+ F A M + GL P
Sbjct: 506 GLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKP 565
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ ++TD L G+ + A
Sbjct: 566 DEHAYAVLTDALCKAGRAEEA 586
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L L AG E A + +++G + +LI+ K+G
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGN 614
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+F + + G D TY +L+ A+ K ++EA +L + G Y
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ D A ++E+ GH P+ YT I + GR +A + +++M G
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++++ DG + G D A
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRA 758
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P VR L+ GL +G + A+ + + M + G P + T+N++I K G
Sbjct: 279 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + K G D TY LI + +EA LL+N V++G P +
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTN 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +FDDA +++ + V+ LI + R EA L E++ G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L P + + DG GK D+A ++ ++
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKM 487
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG + A ++ +MI +G PD T++ L+ +CK + + + + G
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y ILI + + G D A R+ + + GH P + Y I + G+ +DA
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+++ +G P+ Y LI CG G A + L M P
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 772
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G P V ++ G +G ++ A +++ M + G P+ T+NSL+ + K +
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 512
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + K G +V TY L+ D AFRL + ++G P YA
Sbjct: 513 LHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAV 572
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G+ ++A+ F I KG + YTTLI + G AA + M + G
Sbjct: 573 LTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
TP S + ++ L C + L E + L ++SLR +
Sbjct: 630 CTPDSYTYSVLLHAL--CKQKRLNEALPILDQMSLRGI 665
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + L+ GL + E A++++N +K+G P + TF +LI C + +
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 407
Query: 61 VEFCV----EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ + +M S CKL D+ + LI ++ K + EA LL+ + +G P
Sbjct: 408 FDDALRMKNKMMSSKCKL----DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVI 463
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y II G + G+ D A ++ G PN Y +L+ + + +A L +M
Sbjct: 464 TYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM 523
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ G+ P + + G C +HD E+
Sbjct: 524 QKDGIIPNVITYTTLLQG--QCDEHDFDNAFRLFEM 557
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + +++ G L +A + +++ G +P+ T N+L+ C++GE+
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + +G + +Y ILI + +A + EA L + DG +P + +I G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ DA F + G P+ Y +I + GR +A M + G P
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 185 SRCFDLVTDGL 195
++ + GL
Sbjct: 358 DWTYNTLIYGL 368
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG VR D G+ N L+ Q++ +M+K G +P + T++SLI CK+G +E
Sbjct: 786 KGNLAYVRSVD--TSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEE 843
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +C G + Y +LI ++A + + E G P Y ++
Sbjct: 844 ACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 903
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G F+ F ++ G+ + + L + G +V+ ++ + E
Sbjct: 904 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG-YVDICFQMLSIMEKRYCC 962
Query: 184 I-SRCFDLVTDGLKNCGKHDLAEKIEQ 209
I S+ + LVT+ + ++E E+
Sbjct: 963 ISSQTYALVTNKMHEVSSSLVSEVREE 989
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P +L+ L L A ++++M +G + + LI+ + + G+
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ MY + G +TY + I + K G +++A L+ + +G P Y
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+I G G D AF + PN Y L+ +G
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P LL++ + + E A V+ M + G P LE++ L+ +C G+
Sbjct: 851 MCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 910
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
E ++ + +LG D +KIL + KAG +D F++L
Sbjct: 911 FEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V L+ G AG LE A +++ M +G P+ + + LI+ C +
Sbjct: 816 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 875
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + G + +Y++L+ + G ++ L +L+E G+N +
Sbjct: 876 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 935
Query: 121 IIKGAFRRGQFDDAFCFFS 139
+ G + G D F S
Sbjct: 936 LNDGLLKAGYVDICFQMLS 954
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
E ++ +++++ G PD T+N++I++ CK G++ + + + G + T L
Sbjct: 165 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNAL 224
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ + G + +A L + G Y +I+G +A F +K G
Sbjct: 225 VLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGC 284
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
PN +T LI+ + GR +A M + G+ P ++ + G G+ + A K
Sbjct: 285 SPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK 344
Query: 207 IEQL 210
I++L
Sbjct: 345 IKEL 348
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ GF P + LLV GL N G E K + +++ G + D + L + + K+G
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKIL 86
V+ C +M + K C TY ++
Sbjct: 946 VDICFQMLSIMEKRYCCISSQTYALV 971
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P V + L+ G +G +SA ++++ M +G PD T+ S+I+++CKS
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF-------------------R 101
VE +++ S+ + G +V Y LI KAG +DEA
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 102 LLHNLVEDGH----------------NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+H L DG P S +I + G FD A+ F ++ G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P+ YTT I R GR ++A + + +M E G++P + + G + G+ + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG NP V L+ G AG ++ A M+ KM+ + P+ TFN+LI +C G+
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K+G VST ILI + K G D A+ ++ G P Y
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ R G+ DA ++++ G P+ Y++LI G G+ A + L M + G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 181 LTPISRCF 188
P F
Sbjct: 703 CEPSQHTF 710
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P R + L++G + + A ++NKM+++ PD+ T+NSLI+ C+SG
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D TY +I ++ K+ ++EA L +L + G NP +Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A ++ K PN + LI G+ EA +M ++G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 181 LTP 183
L P
Sbjct: 598 LQP 600
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + L+ G G +E A +V M + P+ T+N LI+ CKS
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN- 442
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + + DV TY LI ++G D A+RLL + + G P Y
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + ++A F ++ KG PN +YT LI + G+ EA L +M
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
P S F+ + GL GK A +E+ V +
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P VR +L++ L + A +V +M + G P++ T+ LI+++C +
Sbjct: 314 MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR------------------- 101
E E+ + + G +V TY LI K GMI++A
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 102 ---------------LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+L+ ++E P Y +I G R G FD A+ S + +G
Sbjct: 434 LIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P++ YT++I + R EA + + + G+ P + + DG GK D A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + +V G G +E A Q V+K+++ G DPD T+ SLI C+ +++ ++
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G + Y LI + A IDEA L + +D P Y +IK
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ +A E++ G PN YT LI +F +A L +M E GL P
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 188 FDLVTDG 194
++ + +G
Sbjct: 396 YNALING 402
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ L+ L G ++ KQ+ +M++ P++ T+N ++ CK G VE + + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY LI + +D AF++ + + G Y +I G + D+
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F ++K P YT LI ++CG R EA N + EM E G+ P + ++
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCG-SERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 193 DGL 195
D L
Sbjct: 366 DSL 368
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+N+L+ ++ + G V+ ++Y + + C ++ TY ++ K G ++EA + + +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
E G +P Y +I G +R D AF F+E+ +KG N YT LI R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
EA + ++M + P R + ++ L CG +E +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSL--CGSERKSEAL 343
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 18/210 (8%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G L+ A + KM+K G P + T LI + K G+ + + + G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ D TY I + G + +A ++ + E+G +P Y+ +IKG GQ + AF
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT----------------MCGRGG--RFVEAANYLMEMT 177
++ G P++ + +LI +C F L +M
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
E +TP ++ ++ + G+ G +AEK+
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKV 782
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL A ++ A + KM P + T+ LI+++C S + + + + G
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY +LI ++ ++A LL ++E G P Y +I G +RG +DA
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ + PN Y LI + +A L +M E + P ++ + DG
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 196 KNCGKHDLAEKIEQL 210
G D A ++ L
Sbjct: 473 CRSGNFDSAYRLLSL 487
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 85/226 (37%), Gaps = 26/226 (11%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +Q G L A+ M+ KM + G PDL T++SLI+ G+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIP------------------AVSKAGMIDEAFRL 102
F ++ + G T+ LI A+S D L
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCG 161
L +VE P Y +I G G A F + + +G P+ V+ L++ C
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 162 RGGRFVEAANYLMEMTEMGLTP-ISRCFDLVTDGLKNCGKHDLAEK 206
+ + EAA + +M +G P + C L+ CG + EK
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLI------CGLYKKGEK 847
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A ++V+ MI G P LE+ LI + K GE E ++ ++ + G D +KI+I
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPS-LYAPIIKG 124
V K G++ EAF L N++E F S Y+ +I+G
Sbjct: 875 GVGKQGLV-EAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
M + P + + L+ G+ G L A+++ + M + +G P FN+L+ CK
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ ++ + +G + + K+LI + K G + + NL++ G+ +
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II G ++G + + F+ ++ G + Y+ LI
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P ++LV G AG + +A+++ KMI G PD+ TF SLI+ C+ G+V
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + G + TY ILI A+ + +A LL L P P +Y P+I G
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ ++A E++ K P++ +T LI GR EA + +M +G +P
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++GL G E A +++ M G +PD+ T+N+LI+ CKS E+ EM+ V
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 74 LGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------------------- 113
C+ DV TY +I KAG + EA LL +++ G P
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 114 --------------FPSL--YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
FP + + +I G R GQ F + E+ +G PN Y+ LI
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI-EQLE 211
R ++A L ++ + P ++ V DG GK + A I E++E
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P R LV G L A ++ + + + NSL+ T+ K
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDR 186
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++++ + SC D T+ ILI + G ++A LL + G P Y
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+G + + + A F ++K P+ YT++I+ + G+ EA++ L +M +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
G+ P + F+++ DG G+ AE+I +S
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G AG + A +V +M K+ PD TF LI C G + V +++ + +G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRL 102
D T L+ + KAGM EA+ L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P + LVQ LE +++ +M G+ PD+ ++N L+E + G
Sbjct: 268 MNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGS 327
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + G A+ +TY +L+ K G D+ + + +P Y
Sbjct: 328 IKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNI 387
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G F + F ++ + PN Y LI CG+GG + +A L+ M E G
Sbjct: 388 LIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKG 447
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S+ + V + ++ A
Sbjct: 448 IVPSSKAYTGVIEAFGQAALYEEA 471
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ + G + A+ + M + G PD+ T++ L++T K
Sbjct: 233 MRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNR 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + G+ D+++Y +L+ A ++ G I EA + + G + Y+
Sbjct: 293 LEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSV 352
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G++DD F E+K+ P+ Y LI + G GG F E +M E
Sbjct: 353 LLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEEN 412
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P ++ + + CGK L E +++
Sbjct: 413 VEPNMETYEGL---IFACGKGGLYEDAKKI 439
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G + + + +M +DPD T+N LI+ + G + V +++ + + ++ TY
Sbjct: 361 GRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETY 420
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
+ LI A K G+ ++A ++L ++ E G P Y +I+ + +++A F+ +
Sbjct: 421 EGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNE 480
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G P Y + I RGG + EA L M E GL F+ V + G+++
Sbjct: 481 VGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEE 540
Query: 204 AEK 206
A K
Sbjct: 541 AVK 543
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P ++L+Q GY + + + M+++ +P++ET+ LI K G E +
Sbjct: 379 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKK 438
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + G Y +I A +A + +EA + + + E G NP Y I
Sbjct: 439 ILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFA 498
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
R G + +A S + G + + +I +GG++ EA +EM + P
Sbjct: 499 RGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNEL 558
Query: 187 CFDLVTDGLKNCGKHDLAEK 206
++V + G D +E+
Sbjct: 559 TLEVVLSVYCSAGLVDESEE 578
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P + + L+ G E AK+++ M ++G P + + +IE ++
Sbjct: 408 MVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAAL 467
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + ++ ++ ++GS V TY I A ++ G+ EA +L + E G +
Sbjct: 468 YEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNG 527
Query: 121 IIKGAFRR-GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+IK AFR+ GQ+++A + E++ PN ++++ G E+ E+
Sbjct: 528 VIK-AFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKAS 586
Query: 180 GLTPISRCFDLV 191
G+ P C+ L+
Sbjct: 587 GILPSVMCYCLM 598
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G NP V + + G + A+ ++++M + G D+ +FN +I+ + G+
Sbjct: 478 MNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQ 537
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E V+ Y + K + T ++++ AG++DE+ + G P Y
Sbjct: 538 YEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCL 597
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
++ + + +DA+ E+
Sbjct: 598 MLALYAKNDRLNDAYNLIDEM 618
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ L G L+ +++ ++M G + + ++I ++G+ +E+ + +
Sbjct: 141 IMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQE 200
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFR-LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ TY +I A ++ G+ E L + +G P Y ++ RG D+
Sbjct: 201 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDE 260
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F + G P+ Y+ L+ G+ R + + L EM G P ++++ +
Sbjct: 261 AEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLE 320
Query: 194 GLKNCG 199
G
Sbjct: 321 AYAELG 326
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y I+I + + G++D+ + + +G +Y +I R GQF + + +K
Sbjct: 139 YTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMK 198
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEA-ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ P+ Y T+I C RGG E EM G+ P ++ + + G
Sbjct: 199 QERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLG 258
Query: 202 DLAEKI 207
D AE +
Sbjct: 259 DEAEMV 264
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 383 LKPDTGTYTMIVNEF--CKKGDVWK 405
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + D A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 233 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 301 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT ++ + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D A L ++ G P + +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 317 KFTYTTLIDGC--CKEGDLDTAFEH 339
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
I+ ++G E++ GH P+ Y L+
Sbjct: 393 IVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 429
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY +++ K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + A EM GL P F + DG
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 258 CKNGRVDLAMEIYKQMLS 275
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V + ++ ++G A Q++ MI++ +PD+ TF++LI K +
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+Y + + TY +I K +D+A R+L ++ G +P ++
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D+ F E+ +G N YTTLI + G A + L EM G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P F + GL C K +L + LE
Sbjct: 216 VAPDYITFHCMLAGL--CSKKELRKAFAILE 244
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ G ++ AK+M++ M +G PD+ TF++LI CK+ V+ +E+
Sbjct: 113 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G A+ TY LI + G +D A LL+ ++ G P + ++ G
Sbjct: 173 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 232
Query: 128 RGQFDDAFCFFSEIK 142
+ + AF +++
Sbjct: 233 KKELRKAFAILEDLQ 247
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 64/152 (42%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
D+ ++++ +CK G ++ + + G +V TY +I + +G +A +L
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
L +++E NP ++ +I + + +A + E+ P Y ++I +
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
R +A L M G +P F + +G
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLING 159
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V ++LV L G ++ AK ++ M+K PD+ T+++L++ E
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ ++ +G DV TY ILI K M+DEA L + + P Y+
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + E++ +G P + Y++LI + G A +M +
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P F ++ DGL G+ A+++ Q
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V +L+ G ++ A + +M ++ P + T++SLI+ +CKSG
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G ADV TY LI + K G +D A L + + + P +
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA F ++ KG+ N Y +I + G EA L +M + G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + L ++D AEK+
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKL 536
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 2/213 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++L+ + G + ++ K++K+G PD T N+LI+ +C G+V+
Sbjct: 88 KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G + +Y LI V K G A + L + P +Y II
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +A+ FSE+ +KG + Y TLI G+ EA L EM + P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++++ D L C + + E L V L++
Sbjct: 268 NVYTYNILVDAL--CKEGKVKEAKSVLAVMLKA 298
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 87/181 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + L+ GL +G + ++++M +G D+ T++SLI+ +CK+G
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + ++ T+ IL+ + K G + +A + +L+ G++ Y
Sbjct: 425 LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G ++A S+++ G PN + T+I + +A L +M G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544
Query: 181 L 181
L
Sbjct: 545 L 545
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G ++ A+ + N M G PD+ T+ LI CK+ V+ + +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + + TY LI + K+G I + L+ + + G Y+ +I G +
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 421
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G D A F+++K + PN +T L+ +GGR +A ++ G
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLE 211
++++ +G +C + L E + L
Sbjct: 482 YNVMING--HCKQGLLEEALTMLS 503
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 85/191 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P + L++GL G ++ A +K++ QG + ++ +LI +CK G+
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRA 182
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + DV Y +I A+ K ++ EA+ L + G + Y +I
Sbjct: 183 AIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIY 242
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A +E+ +K PN Y L+ + G+ EA + L M + + P
Sbjct: 243 GFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 184 ISRCFDLVTDG 194
+ + DG
Sbjct: 303 DVITYSTLMDG 313
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++ + + A + ++M +G D+ T+N+LI C G+++ + +
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGL 256
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ +V TY IL+ A+ K G + EA +L +++ P Y+ ++ G F
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A F+ + + G P+ YT LI + EA N EM + + P
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 188 FDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 377 YSSLIDGLCKSGR 389
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 3/211 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ + ++ + +A + +++ +G PDL T N LI C G++ F +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G D T LI + G + +A L+ G YA +I G +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G A F +I + P+ +Y T+I + EA EM G++
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
++ + G GK L E I L E+ L+++
Sbjct: 237 YNTLIYGFCIVGK--LKEAIGLLNEMVLKTI 265
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A N+M+ P + FN ++++ K V + + + G D+ T I
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI G I F +L +++ G+ P +IKG +GQ A F ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
N+ Y TLI + G A +L ++ P ++ + D +
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAM 209
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 54/261 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + +L+ +L G + AK+M N+M G P T+ I + CK G
Sbjct: 660 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 719
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF-------------------- 100
+E ++ + + G DV TY ILI G ID AF
Sbjct: 720 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCL 779
Query: 101 -------------------------------RLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+LL +V+ G NP + Y+ +I G + G
Sbjct: 780 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 839
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A + KG PN +YT LI C F +A +++ M+E G P +
Sbjct: 840 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 899
Query: 190 LVTDGLKNCGKHDLAEKIEQL 210
L+ GL N G EK++ L
Sbjct: 900 LLVVGLCNEGDF---EKVKSL 917
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ L+ AK+++N++ G P++ T+ S+I+ CKSG+V+ +E+ + + G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY L+ + K + +A LL + +DG P Y +++G FD+AF
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ G P+ Y L + GR EA ++++ + LT + + + DG
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR-KGVALTKVY--YTTLIDGF 609
Query: 196 KNCGKHDLAEKI 207
G D A +
Sbjct: 610 SKAGNTDFAATL 621
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P V L+ G A + A +M NKM+ DL+ F LI ++ K ++
Sbjct: 386 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKE 445
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + G +V TY +I K+G +D A +L + DG P Y ++
Sbjct: 446 AKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMY 505
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + A ++++ G PN YTTL+ F A M + GL P
Sbjct: 506 GLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKP 565
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ ++TD L G+ + A
Sbjct: 566 DEHAYAVLTDALCKAGRAEEA 586
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L L AG E A + +++G + +LI+ K+G
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGN 614
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+F + + G D TY +L+ A+ K ++EA +L + G Y
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ D A ++E+ GH P+ YT I + GR +A + +++M G
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++++ DG + G D A
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRA 758
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P VR L+ GL +G + A+ + + M + G P + T+N++I K G
Sbjct: 279 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + K G D TY LI + +EA LL+N V++G P +
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTN 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +FDDA +++ + V+ LI + R EA L E++ G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L P + + DG GK D+A ++ ++
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKM 487
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG + A ++ +MI +G PD T++ L+ +CK + + + + G
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y ILI + + G D A R+ + + GH P + Y I + G+ +DA
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+++ +G P+ Y LI CG G A + L M P
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 772
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G P V ++ G +G ++ A +++ M + G P+ T+NSL+ + K +
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 512
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + K G +V TY L+ D AFRL + ++G P YA
Sbjct: 513 LHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAV 572
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G+ ++A+ F I KG + YTTLI + G AA + M + G
Sbjct: 573 LTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
TP S + ++ L C + L E + L ++SLR +
Sbjct: 630 CTPDSYTYSVLLHAL--CKQKRLNEALPILDQMSLRGI 665
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + L+ GL + E A++++N +K+G P + TF +LI C + +
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 407
Query: 61 VEFCV----EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ + +M S CKL D+ + LI ++ K + EA LL+ + +G P
Sbjct: 408 FDDALRMKNKMMSSKCKL----DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVI 463
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y II G + G+ D A ++ G PN Y +L+ + + +A L +M
Sbjct: 464 TYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM 523
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ G+ P + + G C +HD E+
Sbjct: 524 QKDGIIPNVITYTTLLQG--QCDEHDFDNAFRLFEM 557
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + +++ G L +A + +++ G +P+ T N+L+ C++GE+
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + +G + +Y ILI + A + +A L + DG +P + +I G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ DA F + G P+ Y +I + GR +A M + G P
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 185 SRCFDLVTDGL 195
++ + GL
Sbjct: 358 DWTYNTLIYGL 368
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG VR D G+ N L+ Q++ +M+K G +P + T++SLI CK+G +E
Sbjct: 786 KGNLAYVRSVD--TSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEE 843
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +C G + Y +LI ++A + + E G P Y ++
Sbjct: 844 ACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 903
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G F+ F ++ G+ + + L + G +V+ ++ + E
Sbjct: 904 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG-YVDICFQMLSIMEKRYCC 962
Query: 184 I-SRCFDLVTDGLKNCGKHDLAEKIEQ 209
I S+ + LVT+ + ++E E+
Sbjct: 963 ISSQTYALVTNKMHEVSSSLVSEVREE 989
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P LL++ + + E A V+ M + G P LE++ L+ +C G+
Sbjct: 851 MCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 910
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
E ++ + +LG D +KIL + KAG +D F++L
Sbjct: 911 FEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P +L+ L L A ++++M +G + + LI+ + + G+
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ MY + G +TY + I + K G +++A L+ + +G P Y
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+I G G D AF + PN Y L+ +G
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V L+ G AG LE A +++ M +G P+ + + LI+ C +
Sbjct: 816 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 875
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + G + +Y++L+ + G ++ L +L+E G+N +
Sbjct: 876 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 935
Query: 121 IIKGAFRRGQFDDAFCFFS 139
+ G + G D F S
Sbjct: 936 LNDGLLKAGYVDICFQMLS 954
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
E ++ +++++ G PD T+N++I++ CK G++ + + + G + T L
Sbjct: 165 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL 224
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ + G + +A L + G Y +I+G A F +K G
Sbjct: 225 VLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGC 284
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
PN +T LI+ + GR +A M + G+ P ++ + G G+ + A K
Sbjct: 285 SPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK 344
Query: 207 IEQL 210
I++L
Sbjct: 345 IKEL 348
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ GF P + LLV GL N G E K + +++ G + D + L + + K+G
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKIL 86
V+ C +M + K C TY ++
Sbjct: 946 VDICFQMLSIMEKRYCCISSQTYALV 971
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 5/216 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD---PDLETFNSLIETICK 57
M+ +GF V +L+++G +G + A + ++M K+ D PD T+N+L+ CK
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM-KRNYDCVVPDCVTYNTLVNGFCK 161
Query: 58 SGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ + ++ ++ K G C ++ TY +LI K+G + E LL + +G
Sbjct: 162 AKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVF 221
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+Y+ +I G + F E+ + PN Y+ L+ GR GR+ EA+ L +M
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
T G+ P + ++ DGL G+ A K+ L V
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMV 317
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG--SDPDLETFNSLIETICKS 58
M KG P + L++GL AG + A + ++ + PD+ T N+LI+ +CK
Sbjct: 351 MVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKE 410
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G V ++ S+ ++G ++ TY LI A + EA +L VE G +P Y
Sbjct: 411 GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTY 470
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +I G + A F ++K G P Y L+T R +A + EM
Sbjct: 471 SVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRN 530
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ F+++ DG G A+++
Sbjct: 531 VNHNVDVVSFNIIIDGTLKAGDVKSAKEL 559
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V L+ G +E+ +++ ++M+++ P++ T++ L++ + ++G
Sbjct: 211 MEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
EM + G DV Y +L + K G +A ++L +V+ G P Y
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNV 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG 163
++ G + + DDAF + KG P+ Y TL+ +CG G
Sbjct: 331 VVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAG 374
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEVEFCVEMYYSV 71
+ LV G A L A+ + M K+G D P+L T++ LI+ CKSGEV + + +
Sbjct: 153 NTLVNGFCKAKRLAEARVLFEAM-KKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM 211
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
+ G ADV Y LI A G I+ L ++ +P Y+ +++G R G++
Sbjct: 212 EREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRW 271
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+A ++ +G P+ YT L + GR +A L M + G P + +++V
Sbjct: 272 REASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVV 331
Query: 192 TDGL 195
+GL
Sbjct: 332 VNGL 335
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V +L GL G A ++++ M+++G +P T+N ++ +CK
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA- 119
++ + + K G D TY L+ + AG I EA L L+ + + P ++
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400
Query: 120 -PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I+G + G+ DA S + G N Y LI + +EA E
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460
Query: 179 MGLTPISRCFDLVTDGL 195
G +P S + ++ +GL
Sbjct: 461 SGFSPNSMTYSVMINGL 477
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V + L+ L LE A+ + +M + D+ +FN +I+ K+G+
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGD 552
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+ + + D T+ ILI SK GM+DEA L +V GH P ++
Sbjct: 553 VKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
++KG +G+ + ++ K + + +T++
Sbjct: 613 LLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILA 650
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P V L+QGL G A +M+ M +G PD+ + L + +CK+G
Sbjct: 246 MLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + + G TY +++ + K +D+AF ++ +V+ G P Y
Sbjct: 306 AGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNT 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT--TLITMCGRGGRFVEAANYLMEMTE 178
++KG G+ +A + + + V+T LI + GR +AA M E
Sbjct: 366 LLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVE 425
Query: 179 MGLTPISRCFDLVTDG 194
MGL ++ + +G
Sbjct: 426 MGLQGNIVTYNFLIEG 441
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ GF+P +++ GL L A+ + KM G P + +N+L+ ++C+ +E
Sbjct: 460 ESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLE 519
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + + DV ++ I+I KAG + A LL + P ++ +I
Sbjct: 520 QARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ G D+A + ++ GH P V+ +L+ G G + + L +M +
Sbjct: 580 NRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMAD 635
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L+ +G + ++ +M ++G D+ ++SLI C G++E E+
Sbjct: 183 PNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGREL 242
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + +V TY L+ + + G EA +L ++ G P Y + G +
Sbjct: 243 FDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCK 302
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DA + KG P Y ++ + R +A + M + G P +
Sbjct: 303 NGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVT 362
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + GL GK A + +L +S
Sbjct: 363 YNTLLKGLCGAGKIHEAMDLWKLLLS 388
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+QGL G + A ++ + M++ G ++ T+N LIE + ++ +++
Sbjct: 395 PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKL 454
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G + TY ++I + K M+ A L + + G P Y ++ R
Sbjct: 455 WKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCR 514
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A F E++ H + + +I + G A L EM M L P +
Sbjct: 515 EDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVT 574
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVS 213
F ++ + G D A + + VS
Sbjct: 575 FSILINRFSKLGMLDEAMGLYEKMVS 600
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 88/224 (39%), Gaps = 8/224 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G + + L++G L A L A ++ ++ G P+ T++ +I +CK
Sbjct: 423 MVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQM 482
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G V Y L+ ++ + +++A L + HN +
Sbjct: 483 LSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNI 542
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G A SE+ + P+ ++ LI + G EA +M G
Sbjct: 543 IIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCG 602
Query: 181 LTPISRCFDLVTDGLKNCGK--------HDLAEKIEQLEVSLRS 216
P FD + G G+ H +A+K L+ L S
Sbjct: 603 HVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTS 646
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ KG PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQV 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 378
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YMP 414
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++MI +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 77/192 (40%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 54/261 (20%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G + +L+ +L G + AK+M N+M G P T+ I + CK G
Sbjct: 545 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 604
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF-------------------- 100
+E ++ + + G DV TY ILI G ID AF
Sbjct: 605 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCL 664
Query: 101 -------------------------------RLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+LL +V+ G NP + Y+ +I G + G
Sbjct: 665 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 724
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A + KG PN +YT LI C F +A +++ M+E G P +
Sbjct: 725 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 784
Query: 190 LVTDGLKNCGKHDLAEKIEQL 210
L+ GL N G EK++ L
Sbjct: 785 LLVVGLCNEGDF---EKVKSL 802
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L+ L+ AK+++N++ G P++ T+ S+I+ CKSG+V+ +E+ + + G
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY L+ + K + +A LL + +DG P Y +++G FD+AF
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F ++ G P+ Y L + GR EA ++++ + LT + + + DG
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR-KGVALTKVY--YTTLIDGF 494
Query: 196 KNCGKHDLAEKI 207
G D A +
Sbjct: 495 SKAGNTDFAATL 506
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P V L+ G A + A +M NKM+ DL+ F LI ++ K ++
Sbjct: 271 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKE 330
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + G +V TY +I K+G +D A +L + DG P Y ++
Sbjct: 331 AKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMY 390
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + A ++++ G PN YTTL+ F A M + GL P
Sbjct: 391 GLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKP 450
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ ++TD L G+ + A
Sbjct: 451 DEHAYAVLTDALCKAGRAEEA 471
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L L AG E A + +++G + +LI+ K+G
Sbjct: 443 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGN 499
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+F + + G D TY +L+ A+ K ++EA +L + G Y
Sbjct: 500 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 559
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ D A ++E+ GH P+ YT I + GR +A + +++M G
Sbjct: 560 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 619
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++++ DG + G D A
Sbjct: 620 VAPDVVTYNILIDGCGHMGYIDRA 643
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P VR L+ GL +G + A+ + + M + G P + T+N++I K G
Sbjct: 164 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 223
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + K G D TY LI + +EA LL+N V++G P +
Sbjct: 224 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTN 282
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +FDDA +++ + V+ LI + R EA L E++ G
Sbjct: 283 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 342
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L P + + DG GK D+A ++ ++
Sbjct: 343 LVPNVITYTSIIDGYCKSGKVDIALEVLKM 372
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG + A ++ +MI +G PD T++ L+ +CK + + + + G
Sbjct: 490 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 549
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y ILI + + G D A R+ + + GH P + Y I + G+ +DA
Sbjct: 550 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 609
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+++ +G P+ Y LI CG G A + L M P
Sbjct: 610 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 657
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S G P V ++ G +G ++ A +++ M + G P+ T+NSL+ + K +
Sbjct: 338 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 397
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + K G +V TY L+ D AFRL + ++G P YA
Sbjct: 398 LHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAV 457
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G+ ++A+ F I KG + YTTLI + G AA + M + G
Sbjct: 458 LTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 514
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
TP S + ++ L C + L E + L ++SLR +
Sbjct: 515 CTPDSYTYSVLLHAL--CKQKRLNEALPILDQMSLRGI 550
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + L+ GL + E A++++N +K+G P + TF +LI C + +
Sbjct: 234 MEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 292
Query: 61 VEFCV----EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ + +M S CKL D+ + LI ++ K + EA LL+ + +G P
Sbjct: 293 FDDALRMKNKMMSSKCKL----DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVI 348
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y II G + G+ D A ++ G PN Y +L+ + + +A L +M
Sbjct: 349 TYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM 408
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ G+ P + + G C +HD E+
Sbjct: 409 QKDGIIPNVITYTTLLQG--QCDEHDFDNAFRLFEM 442
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + +++ G L +A + +++ G +P+ T N+L+ C++GE+
Sbjct: 63 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 122
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + +G + +Y ILI + A + +A L + DG +P + +I G
Sbjct: 123 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 182
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ DA F + G P+ Y +I + GR +A M + G P
Sbjct: 183 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242
Query: 185 SRCFDLVTDGL 195
++ + GL
Sbjct: 243 DWTYNTLIYGL 253
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG VR D G+ N L+ Q++ +M+K G +P + T++SLI CK+G +E
Sbjct: 671 KGNLAYVRSVD--TSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEE 728
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ +C G + Y +LI ++A + + E G P Y ++
Sbjct: 729 ACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 788
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G F+ F ++ G+ + + L + G +V+ ++ + E
Sbjct: 789 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG-YVDICFQMLSIMEKRYCC 847
Query: 184 I-SRCFDLVTDGLKNCGKHDLAEKIEQ 209
I S+ + LVT+ + ++E E+
Sbjct: 848 ISSQTYALVTNKMHEVSSSLVSEVREE 874
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V L+ G AG LE A +++ M +G P+ + + LI+ C +
Sbjct: 701 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 760
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + + G + +Y++L+ + G ++ L +L+E G+N +
Sbjct: 761 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 820
Query: 121 IIKGAFRRGQFDDAFCFFS 139
+ G + G D F S
Sbjct: 821 LNDGLLKAGYVDICFQMLS 839
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P +L+ L L A ++++M +G + + LI+ + + G+
Sbjct: 510 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 569
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ MY + G +TY + I + K G +++A L+ + +G P Y
Sbjct: 570 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 629
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+I G G D AF + PN Y L+ +G
Sbjct: 630 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 672
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
E ++ +++++ G PD T+N++I++ CK G++ + + + G + T L
Sbjct: 50 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL 109
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ + G + +A L + G Y +I+G A F +K G
Sbjct: 110 VLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGC 169
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
PN +T LI+ + GR +A M + G+ P ++ + G G+ + A K
Sbjct: 170 SPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK 229
Query: 207 IEQL 210
I++L
Sbjct: 230 IKEL 233
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ GF P + LLV GL N G E K + +++ G + D + L + + K+G
Sbjct: 771 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 830
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKIL 86
V+ C +M + K C TY ++
Sbjct: 831 VDICFQMLSIMEKRYCCISSQTYALV 856
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 185 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 244
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G +++A L+ + G P Y
Sbjct: 245 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTT 304
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT +I+ + GR V+A L EM +G
Sbjct: 305 LIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVG 364
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 365 LKPDTGTYTMIINEF--CKKGDVWK 387
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 150 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 209
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 210 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 269
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G + A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 270 LIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQEN 329
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 330 IRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLK 366
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 95 VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 154
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 214
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 215 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 274
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 275 --CKKGDLNQ 282
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G++
Sbjct: 223 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQ 282
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G D TY LI K G +D AF ++++ Y II
Sbjct: 283 AHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIIS 342
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L EM G P
Sbjct: 343 GLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 402
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 403 SVXTYNVLMNG 413
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + ++N+L+ + G+++ + ++
Sbjct: 128 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 187
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++ G P + +I G + G+ D
Sbjct: 188 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 247
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + EM+ GL P + + D
Sbjct: 248 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLID 307
Query: 194 GLKNCGKHDLAEKIEQ 209
G C + DL E
Sbjct: 308 GC--CKEGDLDAAFEH 321
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L A ++++M +G PD T+ +LI+ CK G+
Sbjct: 255 MLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y +I + + G +A ++L ++ G P Y
Sbjct: 315 LDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTM 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 375 IINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLM 411
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 60 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 119
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 120 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 179
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 180 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 239
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 240 CKNGRVDLAMEIYKQMLS 257
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + ++I +C+ G
Sbjct: 290 MSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGR 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + +GH P Y
Sbjct: 350 PVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNV 409
Query: 121 IIKG 124
++ G
Sbjct: 410 LMNG 413
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF+P LV GL G ++ A ++V K+ + G P+L +N+LI ++CK G+
Sbjct: 321 MVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGD 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +Y ++ + + TY ILI + ++G +D A +++DG Y
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A F E+ KG P +T+LI+ + + +A +M + G
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+TP F + GL C + +AE E
Sbjct: 501 ITPNVYTFTALISGL--CSTNKMAEASE 526
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P L+ G ++ A ++ NKMI G P++ TF +LI +C + +
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNK 520
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + TY +LI + G ID+AF LL ++ + G P Y P
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ A F ++ + N Y+ L+ + GR +EA + EM + G
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640
Query: 181 LTPISRCFDLVTDG 194
+ C ++ DG
Sbjct: 641 INMDLVCHAVLIDG 654
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
AK+ + M G D + T+N LI +CK V VE+ S+ G ADV TY L+
Sbjct: 244 AKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVL 303
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ + +L+ +VE G +P + + ++ G ++G+ DDA+ ++ G P
Sbjct: 304 GFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVP 363
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
N VY LI +GG +A M+ M L P + ++ D G+ D+A
Sbjct: 364 NLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V + L+ G G L +A+ + +M +G +P TF SLI CK +
Sbjct: 426 MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQ 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++Y + G +V T+ LI + + EA L LVE P Y
Sbjct: 486 VQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNV 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G R G+ D AF ++ KG P+ Y LI+ GR +A +++ ++ +
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605
Query: 181 LTPISRCFDLVTDG 194
+ C+ + G
Sbjct: 606 VKLNEMCYSALLHG 619
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS P +L+ +G L+ A ++MI+ G + +NSLI CK G+
Sbjct: 391 MSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGD 450
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +T+ LI K + +AF+L + ++++G P +
Sbjct: 451 LSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTA 510
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +A F E+ + P Y LI R G+ +A L +M + G
Sbjct: 511 LISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKG 570
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + + GL + G+
Sbjct: 571 LVPDTYTYRPLISGLCSTGR 590
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V LV G E+ Q++++M++ G P + L++ + K G+++
Sbjct: 289 KGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDD 348
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ V + G ++ Y LI ++ K G +D+A L N+ P Y+ +I
Sbjct: 349 AYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILID 408
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
R G+ D A +F + G Y +LI + G A + +EMT G+ P
Sbjct: 409 SFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEP 468
Query: 184 ISRCFDLVTDG 194
+ F + G
Sbjct: 469 TATTFTSLISG 479
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+ + ++L+ GL + A ++ + +G D+ T+ +L+ C+ +
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQ 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + +LG + L+ + K G ID+A+ L+ + G P +Y
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNA 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G D A +S + + PN Y+ LI R GR A +Y M + G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + +G G AE +
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESL 457
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 94/239 (39%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V L+ GL + + A ++ ++++++ P T+N LIE C+ G+
Sbjct: 496 MIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGK 555
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA-------------------FR 101
++ E+ + + G D TY+ LI + G + +A
Sbjct: 556 IDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSA 615
Query: 102 LLH----------------NLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LLH +++ G N +A +I GA ++ F ++ +G
Sbjct: 616 LLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQG 675
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P+ +YT++I + G F +A M P + + +GL G+ D A
Sbjct: 676 LRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRA 734
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G N + +L+ G L ++ ++ M QG PD + S+I+T K G
Sbjct: 636 MIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + + +V TY L+ + KAG +D A L + P Y
Sbjct: 696 FKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGC 755
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G +A + +KG N + +I + GRF EA L EMTE G
Sbjct: 756 FLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENG 814
Query: 181 LTP 183
+ P
Sbjct: 815 IFP 817
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P ++ G + A + + M+ + P++ T+ +L+ +CK+GE
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + TY + ++K G + EA L H +++ G +
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNI 789
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G + G+F +A SE+ G P+ Y+TLI R G + M G
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849
Query: 181 LTPISRCFDLVTDG 194
L P ++L+ G
Sbjct: 850 LEPDLVAYNLLIYG 863
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG +++++G G A +++++M + G PD T+++LI C+SG V
Sbjct: 778 KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGA 837
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V+++ ++ G D+ Y +LI G +D+AF L +++ G P
Sbjct: 838 SVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+ L G ++ A + + M+K G + T N +I CK G ++ + + G
Sbjct: 756 FLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENG 814
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI ++G + + +L ++ G P Y +I G G+ D AF
Sbjct: 815 IFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAF 874
Query: 136 CFFSEIKIKGHPPN 149
++ +G P+
Sbjct: 875 ELRDDMLRRGIIPD 888
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P ++L+ G G + A + ++MI +G P L T+ SLI + K
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + + G+ D+ + LI G +D AF LL + + P Y
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ ++A E+K +G P+ Y TLI+ + G +A EM +G
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P ++ + GL + DLAE++ + VS
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVS 614
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V +LL+ L G ++ A M+ M G PD T+N LI C+ G
Sbjct: 367 MVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGN 426
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G + TY LI +SK + A L ++ +G +P ++
Sbjct: 427 AKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNA 486
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G D AF E+ + P+ Y TL+ R G+ EA L EM G
Sbjct: 487 LIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG 546
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P ++ + G G
Sbjct: 547 IRPDHISYNTLISGYSKRG 565
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 2/192 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D+L++ + A + + M ++G P +ETFN+++ K + E +Y + +
Sbjct: 170 DMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFR 229
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
L + V T+ I+I + K G + +A + ++ G P Y +I G RG+ +
Sbjct: 230 LKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEG 289
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A +K +G P+ Y +LI+ +GG+ EA+ L +M E+GL P + ++ + D
Sbjct: 290 ARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLID 349
Query: 194 GLKNCGKHDLAE 205
G C K DL +
Sbjct: 350 GY--CNKGDLVK 359
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ L G L+ AK + M G P++ T+N++I C G VE + +
Sbjct: 240 NIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKN 299
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY LI + K G ++EA +L + E G P Y +I G +G
Sbjct: 300 RGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVK 359
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF + E+ + P Y LI G+ EA + +M + G+ P S ++++ +
Sbjct: 360 AFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILIN 419
Query: 194 GLKNCG 199
G CG
Sbjct: 420 GYCRCG 425
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + ++ G + G +E A+ +++ M +G +PD T+ SLI +CK G+
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGK 321
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + ++G TY LI G + +AF +V P S Y
Sbjct: 322 LEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNL 381
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I F G+ D+A ++ G P+ Y LI R G +A N EM G
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441
Query: 181 LTP 183
+ P
Sbjct: 442 IQP 444
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G +P + + L+ G G L+ A ++ +M K+ PD T+N+L++ C+ G+VE
Sbjct: 475 EGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEE 534
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E+ + + G D +Y LI SK G I++AF + ++ G NP Y +I+
Sbjct: 535 ARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQ 594
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN 171
G + Q D A E+ KG P+ Y +LI G+ EA++
Sbjct: 595 GLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + + ++ L E+ + +M + + TFN +I +CK G+
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + S+ LG +V TY +I G ++ A +L + G P Y
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ ++A ++K G P Y TLI G V+A Y EM
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P ++L+ L GK D A+
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEAD 396
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ G N G L A ++M+++ P + T+N LI + G+
Sbjct: 332 MKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGK 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M + G D TY ILI + G +AF L ++ G P Y
Sbjct: 392 MDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTS 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I +R + A F +I +G P+ ++ LI G A L EM +
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G GK + A ++
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEAREL 538
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + L+ G G + A + ++M+ G +P L T+N+LI+ +CK+ +
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQ 601
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
+ E+ + G D STY LI + K EA
Sbjct: 602 GDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+P + ++L+ L +A ++N M + G +P + F +LI+ + ++G+
Sbjct: 360 MVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E C K+G DV Y ++I G +++A + + E G P Y
Sbjct: 420 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 479
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+F +A E++ +G PN VY+TL+ G+ +EA + +M E G
Sbjct: 480 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 539
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P V ++++ G + +++++M+K G PDL T+N L+ + +
Sbjct: 325 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 384
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + ++G V + LI +S+AG ++ + V+ G P Y
Sbjct: 385 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 444
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ + A F E+ KG PN Y ++I G+F EA L EM G
Sbjct: 445 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 504
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + + + LKN GK
Sbjct: 505 CNPNFVVYSTLVNNLKNAGK 524
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V L+ GL AG LE+ K +++ +K G PD+ + +I GE
Sbjct: 395 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 454
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E EM+ + + G +V TY +I AG EA LL + G NP +Y+
Sbjct: 455 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 514
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGH 146
++ G+ +A ++ KGH
Sbjct: 515 LVNNLKNAGKVLEAHEVVKDMVEKGH 540
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 2/202 (0%)
Query: 1 MSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS 58
+ K FN P + ++ LL + + +M++ G PD+ T+N ++ +
Sbjct: 288 IKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRL 347
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G+ + + + K G D+ TY IL+ ++ A LL+++ E G P +
Sbjct: 348 GKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHF 407
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G R G+ + F E G P+ YT +IT GG +A EMTE
Sbjct: 408 TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 467
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
G P ++ + G GK
Sbjct: 468 KGQLPNVFTYNSMIRGFCMAGK 489
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
LL++ G ++ +++++MIK G TFN LI T ++G VE +
Sbjct: 234 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTF 293
Query: 75 GSCADVSTYKILIPA---VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
+Y ++ + V + +ID + ++EDG P Y ++ FR G+
Sbjct: 294 NYRPYKHSYNAILHSLLGVKQYKLIDWVY---EQMLEDGFTPDVLTYNIVMFANFRLGKT 350
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
D + E+ G P+ Y L+ G + + A N L M E+G+ P F +
Sbjct: 351 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 410
Query: 192 TDGLKNCGK 200
DGL GK
Sbjct: 411 IDGLSRAGK 419
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 5/183 (2%)
Query: 29 AKQMVNKMIKQGS---DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
A+ +V + IK + P ++N+++ ++ + + +Y + + G DV TY I
Sbjct: 280 ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNI 339
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ A + G D +RLL +V+DG +P Y ++ + A + ++ G
Sbjct: 340 VMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG 399
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P +TTLI R G+ +EA Y M E ++G TP C+ ++ G + G+ + A
Sbjct: 400 VEPGVIHFTTLIDGLSRAGK-LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 458
Query: 205 EKI 207
E++
Sbjct: 459 EEM 461
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + L+ GLL E+A ++ +M G P++ T+N L++ KS ++
Sbjct: 783 GTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDEL 842
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y + G ++ T+ I+I A+ K+ I++A L + ++ +P P Y P+I G
Sbjct: 843 FELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGG 902
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ ++A F E+ PN +Y LI G+ G A + M + G+ P
Sbjct: 903 LLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPD 962
Query: 185 SRCFDLVTDGLKNCGK-HDLAEKIEQLEVS 213
+ + ++ + L G+ D E+L+++
Sbjct: 963 LKSYTILVECLFMTGRVDDAVHYFEELKLT 992
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V +L+ L AG L+ AK++ KM PDL T+ +L+ G+
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGD 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G DV TY IL+ A+ K+G +D+AF +L + G P Y
Sbjct: 348 LETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNT 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F+ ++ G P Y I G+ G +A + +M + G
Sbjct: 408 LISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG 467
Query: 181 LTP-ISRC 187
+ P I+ C
Sbjct: 468 IMPSIAAC 475
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GLL AG E A ++ +M P+ +N LI K+G V +++ + K G
Sbjct: 899 LIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEG 958
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ +Y IL+ + G +D+A L G +P Y +I G + + ++A
Sbjct: 959 IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEAL 1018
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FSE+K +G P Y LI G G +A E+ MGL P ++ + G
Sbjct: 1019 SLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGH 1078
Query: 196 KNCGKHDLA 204
G D A
Sbjct: 1079 SKSGNKDRA 1087
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF + L+ LL G+ + A ++ +MI +G P ++T+++L+ + + +
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + LG ++ TY I I + +AG ID+A+ +L + ++G P Y
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ D A +++++ H P+ Y TL++ G G + EM G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + ++ + L GK D A
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQA 386
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + ++ L AG ++ A ++ M +G PD+ T+ LI+ +C +G+
Sbjct: 253 METLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGK 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + D+ TY L+ G ++ R + DG+ P Y
Sbjct: 313 LDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTI 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ + G+ D AF ++++G PN Y TLI+ R EA M +G
Sbjct: 373 LVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLG 432
Query: 181 LTPISRCFDLVTD 193
+ P + + L D
Sbjct: 433 VAPTAYSYVLFID 445
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + ++++ L+ + + A + ++I P T+ LI + K+G E
Sbjct: 852 RGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEE 911
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++ + + + Y ILI KAG ++ A L ++++G P Y +++
Sbjct: 912 AMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVE 971
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F G+ DDA +F E+K+ G P+ Y +I G+ R EA + EM G++P
Sbjct: 972 CLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISP 1031
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI-EQLE 211
++ + N G D A K+ E+L+
Sbjct: 1032 ELYTYNALILHFGNAGMVDQAGKMFEELQ 1060
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L + G E A KM K+G P + N+ + ++ + G
Sbjct: 428 MESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGR 487
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D TY +++ SKAG ID+A +LL ++ +G P +
Sbjct: 488 IREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNS 547
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ G+ D+A+ F +K P Y LIT G+ G+ ++A + M E G
Sbjct: 548 LIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + D L DLA K+
Sbjct: 608 CPPNTVTFNALLDCLCKNDAVDLALKM 634
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%)
Query: 22 NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS 81
N G LE+ K+ ++M G PD+ T+ L+E +CKSG+V+ +M + G ++
Sbjct: 344 NYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLH 403
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY LI + +DEA L +N+ G P Y I + G + A F ++
Sbjct: 404 TYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKM 463
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
K +G P+ + GR EA + ++ GL+P S ++++ G+
Sbjct: 464 KKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQI 523
Query: 202 DLAEKI 207
D A K+
Sbjct: 524 DKATKL 529
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ +LV+ L G ++ A ++ G DPD ++N +I + KS
Sbjct: 954 MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + G ++ TY LI AGM+D+A ++ L G P Y
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNA 1073
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMC 160
+I+G + G D AF F ++ I G PN + L C
Sbjct: 1074 LIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + +LL+ + ++ ++ N+M+ +G P++ T N +I + KS
Sbjct: 814 MKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNS 873
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++YY + TY LI + KAG +EA ++ + + P ++Y
Sbjct: 874 INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + A F + +G P+ YT L+ GR +A +Y E+ G
Sbjct: 934 LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993
Query: 181 LTPISRCFDLVTDGL 195
L P + ++L+ +GL
Sbjct: 994 LDPDTVSYNLMINGL 1008
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P ++L+ G AG + A + +MIK+G PDL+++ L+E + +G
Sbjct: 919 MPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGR 978
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V + + G D +Y ++I + K+ ++EA L + G +P Y
Sbjct: 979 VDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNA 1038
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G D A F E++ G PN Y LI + G A + +M +G
Sbjct: 1039 LILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVG 1098
Query: 181 LTPISRCF 188
+P + F
Sbjct: 1099 CSPNAGTF 1106
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + + L G + AK + N + G PD T+N +++ K+G+
Sbjct: 463 MKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQ 522
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ LI + KAG +DEA+++ L + P Y
Sbjct: 523 IDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNI 582
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A F +K G PPN + L+ + A MT M
Sbjct: 583 LITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN 642
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P ++ + GL G+ A
Sbjct: 643 CSPDVLTYNTIIYGLIKEGRAGYA 666
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ L+ L + ++ +M G P++ T+ I + ++G
Sbjct: 218 MISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ G DV TY +LI A+ AG +D+A L + H P Y
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + F+SE++ G+ P+ YT L+ + G+ +A + L M G
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++ + GL N + D A
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEA 421
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D P V ++L+ GL G L A + M + G P+ TFN+L++ +CK+
Sbjct: 568 LKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDA 627
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++M+ + + DV TY +I + K G AF H + + +LY
Sbjct: 628 VDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYT- 686
Query: 121 IIKGAFRRGQFDDA 134
++ G + G+ +DA
Sbjct: 687 LLPGVVKDGRVEDA 700
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L AG ++ A QM ++ P + T+N LI + K G+
Sbjct: 533 MLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGK 592
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ S+ + G + T+ L+ + K +D A ++ + +P Y
Sbjct: 593 LLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNT 652
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
II G + G+ AF F+ ++K K P+ TL+ + GR +A +ME
Sbjct: 653 IIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVME 706
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G +E + + M KQ + + T+ ++ + + G + + + G + +Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI + + G EA ++ ++ +G P Y+ ++ RR E++
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMET 255
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G PN YT I + GR GR +A L M + G P + ++ D L GK D
Sbjct: 256 LGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDK 315
Query: 204 AEKI 207
A+++
Sbjct: 316 AKEL 319
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ L ++ A +M +M PD+ T+N++I + K G
Sbjct: 603 MKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV-EDGHNPFPSLYA 119
+ Y+ + K S V+ Y L+P V K G +++A +++ V + G ++
Sbjct: 663 AGYAFWFYHQMKKFLSPDHVTLYT-LLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWG 721
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE- 178
+++ + ++A F + + + LI + + + ++A + T+
Sbjct: 722 ELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKS 781
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+G P ++ + DGL C + A K+
Sbjct: 782 LGTHPTPESYNCLMDGLLGCNITEAALKL 810
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 5/169 (2%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G + A + KM + G + ++N LI + + G + +++Y + G + TY
Sbjct: 171 GGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTY 230
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ A+ + LL + G P Y I+ R G+ DDA+ ++
Sbjct: 231 SALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMED 290
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
+G P+ YT LI G+ +A +M P DLVT
Sbjct: 291 EGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP-----DLVT 334
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P ++L+ G + A ++ +M + G P++ T++++I C+ +
Sbjct: 33 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTK 92
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + G ++ TY L+ + + G++DEA+ LL + E G P Y
Sbjct: 93 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 152
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D A F + PP+ Y+TLI + GR EA +M E
Sbjct: 153 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P F + DGL C L E + LE
Sbjct: 213 CEPDVVTFTALMDGL--CKGDRLQEAQQVLET 242
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + + L+ GL G A ++ M + +PD+ T++ LI CK
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K DV T+ L+ AG++D+A RLL +V +P Y
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A + +G PN YT LI R G+ A L EM G
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + + G CG DL E + LE
Sbjct: 493 VQPNVITYRSLIGGF--CGTGDLEEARKMLE 521
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ G +++A ++ +M++ G P+L T+N+L+ +C++G
Sbjct: 68 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 127
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + + G D +Y L+ + K G ID A ++ + P Y+
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D+A F +++ P+ +T L+ +G R EA L M +
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
TP + + DGL G+ A+++
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEV 274
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T+ +I+ +CK+ + + + K G+ + TY +LI K + A+ LL +
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
E G P Y+ +I G R+ + D A+ F ++ G PN Y TL++ R G
Sbjct: 69 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
EA L EM E GL P +D + GL GK D+A K+
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 169
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P V L+ GL G + A+++ +MI +G +P++ T+NSLI C +
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D+ TY LI + K G EA RL ++ NP Y+
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F ++ + P+ ++TL+ G +A L EM
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P + + DG G+ A ++
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRV 449
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 6/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P D L+ GL G ++ A ++ PD+ +++LI +CK+G
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ +++ + + SC DV T+ L+ + K + EA ++L + + P Y+
Sbjct: 198 LDEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLM-EMT 177
+I G + GQ DA F + ++G PN Y +LI C G V++A LM EMT
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG--VDSALLLMEEMT 314
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P ++ + DGL G+ A ++
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRL 344
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V LV G G + A++++ +M K+G P++ T+ +LI+ C++G+ +
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL-YAPIIKGA 125
+ + G +V TY+ LI G ++EA ++L L D + Y ++ G
Sbjct: 484 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGL 543
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-EMGLTPI 184
R G+ A IK G PP +Y LI +G +A L EMT P
Sbjct: 544 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 603
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ V L G+H+ A +
Sbjct: 604 AEAYEAVIQELAREGRHEEANAL 626
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ GL A L A KM K+G+ P+ T+N LI CK +V + + +
Sbjct: 12 IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 71
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY +I + +D A++L +VE+G P Y ++ G R G D+A
Sbjct: 72 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 131
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ E++ +G P++ Y TL+ + G+ A + + P + + G
Sbjct: 132 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 191
Query: 195 LKNCGKHDLAEKI 207
L G+ D A K+
Sbjct: 192 LCKTGRLDEACKL 204
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L+ GL L+ A+Q++ M + P++ T++SLI+ +CK+G+
Sbjct: 208 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ 267
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + G +V TY LI +D A L+ + G P Y
Sbjct: 268 VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 327
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A F ++K K P+ Y+ LI + R A +M +
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 387
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F + +G N G D AE++
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERL 414
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ GL G L+ A ++ KM + +PD+ TF +L++ +CK ++ ++
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ +V TY LI + K G + +A + ++ G P Y +I G
Sbjct: 240 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
D A E+ G P+ Y TLI + GR EA +M P
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 359
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + G + D+A +
Sbjct: 360 YSCLIGGFCKLERIDMARTL 379
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ +P + + +V G G + A+ +K+++ G PD T+ SLI C++ V+
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E++ + + G + +Y LI + +AG I+EA +L ++ ED P Y +I
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G+ +A F+E+K KG PN YT LI + + EA L EM+E GL
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366
Query: 183 PISRCFDLVTDG 194
P ++ + DG
Sbjct: 367 PSVVTYNALIDG 378
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ +P + + L+ G LESA ++++ M + G PD T++ I+T+CK G
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ SV G A+ Y LI K G ID A+ LL ++ D P Y
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + + +A +++ G P YT LI + G F A M +G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 181 LTP 183
P
Sbjct: 610 YQP 612
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P R + L+ GL + A ++NKM+++ P L T+NSLI CK +
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G D TY + I + K G ++EA L ++ G +Y
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ D A+ + PN Y LI + + EA++ + +M MG
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ P + ++ + G D A K+ VSL
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P V + L+ G G ++ A ++++ M P+ T+N LI +CK +
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + + + TY LI K ++ A+RLL + E+G P Y+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ ++A F +K KG N +YT LI + G+ A + L M
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 181 LTPISRCFDLVTDGL 195
P S ++++ +GL
Sbjct: 540 CLPNSYTYNVLIEGL 554
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ P VR +L+ L +G A + N+M ++G +P++ T+ LI+ +CK +
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M + + G V TY LI K GMID+AF +L + + P Y
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ + A +++ + P+ Y +LI + A L M E G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + D L G+
Sbjct: 470 LVPDQWTYSVFIDTLCKEGR 489
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +R + ++ L ++ K + +++ P++ TFN+++ CK G V
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNV-VEA 213
Query: 66 EMYYS-VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y S + + G D TY LI + +D A+ + + + G Y +I G
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G+ ++A F+++ P YT LI GR VEA N EM E G P
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ DGL K D A K+
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKM 356
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G ++ A ++ +M+ P+ T+N LIE +CK +++ + + +G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY ILI + K G D A ++ +++V G+ P Y + F +G ++
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+++ +G P+ YT LI R G A ++L M + G P
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG + A ++ M + P + T+ LI + SG + ++ + + G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY +LI + K +DEA ++L + E G P Y +I G + G DDAF
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ PN Y LI + + +A L +M E L+P ++ + G
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG- 448
Query: 196 KNCGKHDL 203
C +DL
Sbjct: 449 -QCKVNDL 455
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P + + L G +E A + + + +G + + +LI+ CK G+
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + TY +LI + K + EA L+ ++ G P Y
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G FD A F+ + G+ P+ YT + G E + + +M E G
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P + ++ DG G
Sbjct: 645 ILPDLVTYTVLIDGYARLG 663
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 29/236 (12%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P V + + G LE ++ KM ++G PDL T+ LI+ + G
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE---------------------- 98
+ + G + ILI +S + E
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVW 724
Query: 99 -------AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
A +L +VE G S+Y +I G ++ + ++A +K +G P+
Sbjct: 725 KTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 784
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+Y +L+ C + G + EA + M E GL P+ + L+ GL G ++ A+ +
Sbjct: 785 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 840
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P L+ G +++A ++ M ++G + ++ +LI +C++G +
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + + C V TY +LI A+S +G EA L + + E G P Y +I G
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDG 343
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + D+A SE+ KG P+ Y LI + G +A L M P
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403
Query: 185 SRCFDLVTDGL 195
+R ++ + GL
Sbjct: 404 TRTYNELICGL 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++L++GL ++ A +V KM+ G P + T+ LI + K G + +++
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + LG DV TY + A GM++E ++ + E+G P Y +I G R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G AF F + G P+ + + LI R E +E+G+
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR------SEIGI------ 709
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLE 211
D + N D+A+ + LE
Sbjct: 710 -----DSVSNVNSVDIADVWKTLE 728
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 29/222 (13%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ +L G + A ++ N M+ G PD+ T+ + + G
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G D+ TY +LI ++ G+ AF L +V+ G P + +
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 121 IIKG-----------------------------AFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+IK ++ +++ A F ++ G +
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVS 749
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
+Y LI + R EA + M E G++P ++ + D
Sbjct: 750 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 14 DLLVQGLLNAGY-----LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
D+ + G L AG+ LE A+ +V+ M ++G P + +NSL++ CK G V +
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
++ + G + +YK+L+ + G ++A + H L+ G+N + +I G +R
Sbjct: 807 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKR 866
Query: 129 GQFDD 133
D+
Sbjct: 867 DLVDE 871
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P + L+ G A ++V+ M++ G P LE++ L+ + G
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
E +++ + G D +K+LI + K ++DE L+
Sbjct: 834 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELI 876
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + L+ A + A +++ +M + G P + T+NSLI + K G
Sbjct: 251 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + G DV TY LI + +AG ID A +V +G P Y
Sbjct: 311 LEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNA 370
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK RG+F + F E + G P+ + TL+ + G+ G E + EM + G
Sbjct: 371 LIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAG 430
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + CG DLA +I
Sbjct: 431 YIPERDTYVSLISSYSRCGLFDLAMQI 457
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + L+ + A Q+ ++M G +PD TFNSL++ K+
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + ++G V TY LI + K G++++A L + G P Y
Sbjct: 276 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTT 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G+ D A + E+ G PN Y LI M G G+F E E G
Sbjct: 336 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAG 395
Query: 181 LTPISRCFDLVT 192
P D+VT
Sbjct: 396 FVP-----DIVT 402
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ GL AG +++A ++M++ G P+L T+N+LI+ G+
Sbjct: 321 MEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGK 380
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ G D+ T+ L+ + G+ E + + + G+ P Y
Sbjct: 381 FPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVS 440
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G FD A + + G P+ Y +++ RGGR+ +A EM E
Sbjct: 441 LISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERD 500
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
P + + N + D
Sbjct: 501 CKPDEYSYSSLLHAYANAKRLD 522
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 1/203 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG-EV 61
D P LV AG A + +M+ G P + T+N ++ K
Sbjct: 147 DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPW 206
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ VE+ S+ + G D TY LI + + EA ++ + G P + +
Sbjct: 207 KEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 266
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ + + D+A E++ G PP+ Y +LI+ + G +A EM G+
Sbjct: 267 LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM 326
Query: 182 TPISRCFDLVTDGLKNCGKHDLA 204
P + + GL GK D A
Sbjct: 327 KPDVVTYTTLISGLDRAGKIDAA 349
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGY-LESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M D G P + ++++ + ++V M + G PD T+N+LI +
Sbjct: 180 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 239
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ +++ + G D T+ L+ KA DEA ++ + G P Y
Sbjct: 240 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 299
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G + A E+++KG P+ YTTLI+ R G+ A EM
Sbjct: 300 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 359
Query: 180 GLTP 183
G P
Sbjct: 360 GCKP 363
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG-QFDDAFCF 137
D Y L+ A S+AG +A + +V+ G P Y ++ + + +
Sbjct: 153 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 212
Query: 138 FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKN 197
+ +K G P+R Y TLI+ C R + EAA EM G P F+ + D
Sbjct: 213 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 272
Query: 198 CGKHDLA-EKIEQLE 211
+HD A E I+++E
Sbjct: 273 ARRHDEAIEVIQEME 287
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P + + L+ G + +M K G P+ +T+ SLI + + G +
Sbjct: 395 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 454
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++Y + + G DVSTY ++ A+++ G ++A +L + E P Y+ ++
Sbjct: 455 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 514
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D +I + P+ + TL+ + + EA +E+ +
Sbjct: 515 YANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQ------ 568
Query: 185 SRC---FDLVTDGLKNCGKHDLAEKIEQL 210
RC +++ + GK+ + K+E++
Sbjct: 569 KRCSLDINVLNAMVSIYGKNRMVRKVEKI 597
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + N + L+ G E + ++ ++ G PD ++N++I + G+
Sbjct: 601 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 660
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G DV TY I + + M +EA L+ +V G P Y
Sbjct: 661 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 720
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP 147
I++G R G+ DA F S + + HP
Sbjct: 721 IVEGYCRNGKLTDAKIFVSNLP-QLHP 746
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 6/205 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLL----NAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC 56
+SD ++ + + LV+ L+ L A++ ++ ++ D+ N+++
Sbjct: 527 LSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYG 586
Query: 57 KSGEVEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
K+ V VE S+ K + +TY L+ S+ G ++ +L + G P
Sbjct: 587 KNRMVR-KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDR 645
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y +I R+GQ +A FSE+K G P+ Y + F EA +
Sbjct: 646 YSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRY 705
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGK 200
M G P R ++ + +G GK
Sbjct: 706 MVTQGCKPNERTYNSIVEGYCRNGK 730
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T+NSL+ + G+ E C + + G D +Y +I A + G + EA RL +
Sbjct: 612 TYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 671
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G P Y +K F++A + +G PN Y +++ R G+
Sbjct: 672 KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 731
Query: 167 VEAANYLMEMTEM 179
+A ++ + ++
Sbjct: 732 TDAKIFVSNLPQL 744
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P L+ G + A Q+ +M++ G PD+ T+N+++ + + G
Sbjct: 426 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 485
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + D +Y L+ A + A +D+ L ++ + P L
Sbjct: 486 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 545
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG--RGGRFVEAANYLMEMTE 178
++ + +A F E++ K + V ++++ G R R VE LM+ +
Sbjct: 546 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 605
Query: 179 MGLT 182
+ L+
Sbjct: 606 INLS 609
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L L +G E A ++K+G T+ SL++ K+G
Sbjct: 558 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGN 614
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
EF + + G AD TY +L+ A+ K ++EA +L + G Y
Sbjct: 615 TEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTI 674
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ D A F+E+ GH P+ YT I+ + GR EA + + EM G
Sbjct: 675 IISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNG 734
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P +++ +G + G D A
Sbjct: 735 VAPDVVTYNVFINGCGHMGYMDCA 758
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ L+ L+ AK +N++ G P++ + S+I+ CK G+V +E++
Sbjct: 432 VLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHE 491
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + TY LI + + + +A L+ + EDG P Y +I+G ++ +FD+A
Sbjct: 492 GCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 551
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F F ++ G P+ Y L + GR EA ++L+ + G+ + + DG
Sbjct: 552 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDG 608
Query: 195 LKNCGKHDLAEKI 207
G + A +
Sbjct: 609 FSKAGNTEFAAAL 621
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 96/258 (37%), Gaps = 51/258 (19%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G + +++ ++ G + AK M N+MI G P T+ I + CK G
Sbjct: 660 MTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGR 719
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF-------------------- 100
+E + + + G DV TY + I G +D AF
Sbjct: 720 IEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWL 779
Query: 101 -------------------------------RLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+LL +V+ G NP Y+ II G +
Sbjct: 780 LLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 839
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A + K PN +YT LI C F +AA+++ M E G P +
Sbjct: 840 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYH 899
Query: 190 LVTDGLKNCGKHDLAEKI 207
+ GL + G +D A+ +
Sbjct: 900 YLITGLCDEGDYDKAKAL 917
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV G AG E A ++ KM+ +G D T++ L++ +CK ++ + + + G
Sbjct: 605 LVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRG 664
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ Y I+I + K G D A + + ++ GH P Y I + G+ ++A
Sbjct: 665 VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAG 724
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
E++ G P+ Y I CG G A + L M + P
Sbjct: 725 HLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEP 772
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + LL++GL G + A+ ++++M ++G P + T+N++I+ CKSG
Sbjct: 279 MLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGR 338
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D TY LI + G DEA LL+ + G +P +
Sbjct: 339 LKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTN 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + + DDA S + + Y LI++ + R EA + L E+ G
Sbjct: 398 IINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANG 457
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
L+P + + D GK A ++ +L
Sbjct: 458 LSPNVVIYTSIIDAYCKVGKVGAALEVFKL 487
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P V ++ G A ++ A ++ + MI DL+ + LI + K ++
Sbjct: 386 RGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKE 445
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G +V Y +I A K G + A + +G P Y+ +I
Sbjct: 446 AKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIY 505
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + A ++++ G P YTTLI + F A M + GLTP
Sbjct: 506 GLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 565
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ ++++TD L G+ + A
Sbjct: 566 DEQAYNVLTDALCKSGRAEEA 586
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 3/204 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P L+ GL+ L A ++ KM + G P + T+ +LI+ CK E +
Sbjct: 491 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 550
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G D Y +L A+ K+G +EA+ LV+ G Y ++
Sbjct: 551 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVD 607
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G + A ++ +G + Y+ L+ + + EA + L +MT G+
Sbjct: 608 GFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKG 667
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GKHD A+ +
Sbjct: 668 NIVAYTIIISEMIKEGKHDHAKSM 691
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +G P + ++ G L A + + + G + D T N+L+ C++G+
Sbjct: 174 LVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGD 233
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + +G + +Y ILI + + + EA LL +++DG +P Y
Sbjct: 234 LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTL 293
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G + G+ DA E+ +G P+ Y +I + GR +A M G
Sbjct: 294 LIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNG 353
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++ + GL GK D AE++
Sbjct: 354 CNPDDWTYNSLIHGLCG-GKPDEAEEL 379
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +L+Q L L A ++++M +G ++ + +I + K G+
Sbjct: 625 MVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGK 684
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M+ + G TY + I + K G I+EA L+ + +G P Y
Sbjct: 685 HDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNV 744
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
I G G D AF + PN Y L+
Sbjct: 745 FINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLL 781
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P +L++ + E A V MI+ G P LE+++ LI +C G+
Sbjct: 851 MLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGD 910
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH 111
+ ++ + ++ + +KIL + KAG +D +LL + +E+ H
Sbjct: 911 YDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLL-SAMENRH 960
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 17/206 (8%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKM--IKQGSDPDL----ETFNSLIETICKSGEVE 62
P L+V + +G E ++ V+ + I++ L + +N + ++ + E
Sbjct: 106 PANYDKLVVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTE 165
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++Y + + G D TY +I A K G + A R L E G ++
Sbjct: 166 HMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALL 225
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-----TMCGRGGRFVEAANYLMEMT 177
G R G A + + G N YT LI T C R EA L+ M
Sbjct: 226 LGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR-----EALVLLLMML 280
Query: 178 EMGLTPISRCFDLVTDGLKNCGK-HD 202
+ G +P + L+ GL G+ HD
Sbjct: 281 QDGCSPNLHTYTLLIRGLCKEGRIHD 306
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 3/199 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL G ++ A+ + N+M+K G P + TFN+LI+ +CK VE + ++ + K G
Sbjct: 272 VIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRG 331
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY ++I + G + A L+ + +D P Y +I+ G+ +
Sbjct: 332 YVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGL 391
Query: 136 CFFSEIKIKGHPPNRPVYTTLI-TMCGR--GGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
F ++ PN Y LI +M R + A L+EM + G P F+ V
Sbjct: 392 DLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVL 451
Query: 193 DGLKNCGKHDLAEKIEQLE 211
DGL G D A++I L+
Sbjct: 452 DGLLLTGNQDFAKEILSLQ 470
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M + G DL +FN++++ +CKS VE ++ ++ K AD +Y I++
Sbjct: 153 MHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKAL-KGKFKADCVSYNIIVNGWCLIKR 211
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
+A +L +VE G P + Y ++ G FR GQ ++A+ FF E+K + + YT+
Sbjct: 212 TPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTS 271
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+I G G A N +M + G+ P F+ + L C K + I
Sbjct: 272 VIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQIL--CKKDSVENAI 321
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE----FCVEMYY 69
+++V G A +M+ +M+++G P+L T+N ++ ++G+ F +EM
Sbjct: 200 NIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKK 259
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
C + DV TY +I + G I A + + +V+DG P + + +I+ ++
Sbjct: 260 RKCDI----DVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKD 315
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTE 178
++A F E+ +G+ PN Y +I +C G ++ A LME E
Sbjct: 316 SVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGE--MQRAMELMERME 363
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G+ P +L+++GL + G ++ A +++ +M +P+++T+N LI C +GE
Sbjct: 327 MVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGE 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE---AFRLLHNLVEDGHNPFPSL 117
+E ++++ + ++ TY ILI ++ D A +LL +V+ G P
Sbjct: 387 IEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLT 446
Query: 118 YAPIIKGAFRRGQFDDA 134
+ ++ G G D A
Sbjct: 447 FNRVLDGLLLTGNQDFA 463
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
+++ +GLL++G + A +++ ++ S PD TF +LI +C++G E+
Sbjct: 372 NIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDAR 431
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G DV +Y +I K G +A + N+V+DG P +Y +I G R + +
Sbjct: 432 NSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKIN 491
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA + E+ G P Y TLI + ++ EA++ EM E G P R + +
Sbjct: 492 DAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLI 551
Query: 193 DGLKNCGKHDLAEKI 207
GL K D+A +I
Sbjct: 552 RGLCRDKKVDVALRI 566
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + + L+ GL A + A + +M+++G PD+ T+ SLI +C+ +
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G DV + ILI + AG +DEAF + + E +P Y
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G D A ++ I G P+ Y T I R E L E+ G
Sbjct: 620 LMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 679
Query: 181 LTP 183
+ P
Sbjct: 680 IMP 682
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G A ++ M+K G P+ +N+LI C+ ++ +++Y + G C + TY
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
LI + KA EA L ++E G P YA +I+G R + D A + EI
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G + V+ LI G+ EA +EM E +P ++ + DG G D
Sbjct: 573 AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632
Query: 204 AEKI 207
A +
Sbjct: 633 AASL 636
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 5/208 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESA----KQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
G NP VR + L+ + A A + + + P+L+T+N ++ ++C G+
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ V ++ S+ + G D TY L+ ++K +D A LL + G Y
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233
Query: 121 IIKGAFRRGQFDDAFCFFSE-IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G FR G F+ A + + ++ G PN Y ++ + GRF EA M
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + ++ GL G D A ++
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARV 321
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G + A ++ +M G P + T+N+LI+ +CK+ +
Sbjct: 465 MVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEK 524
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G D+ TY LI + + +D A R+ +++ G ++
Sbjct: 525 YQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+AFC + E+K K PN Y TL+ G +AA+ + + G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ GL +C +
Sbjct: 645 LKPDIVTYNTRIKGLCSCNR 664
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++ +++++ L G ++ A + + + ++G PD T+++L+ + K +++ +++
Sbjct: 156 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDL 215
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHNPFPSLYAPIIKGAF 126
+ G AD Y L+ + GM ++A ++ LV D G +P + Y ++ G
Sbjct: 216 LDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLC 275
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+F +A +S + H + Y LI R G AA +M + GL
Sbjct: 276 KLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVS 335
Query: 187 CFDLVTDGLKNCGKHDLAEK 206
++ + G G+ A K
Sbjct: 336 VYNSLIKGFCEVGRTGEAWK 355
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 35/240 (14%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G +P + +++ GL G + A ++ ++M+ D T+ LI +C+SG+V+
Sbjct: 257 DPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVD 316
Query: 63 FCVEMYYSVCKLGSCADVS----------------------------------TYKILIP 88
+Y + K G DVS TY I+
Sbjct: 317 SAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTK 376
Query: 89 AVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+ +GM+ EA LL L D +P + +I G G + AF + + G
Sbjct: 377 GLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEE 436
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y+++I + GR +A M + G P S ++ + +G K + A KI
Sbjct: 437 LDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKI 496
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF P +R L++GL ++ A ++ ++++ G D+ N LI +C +G+
Sbjct: 535 MLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGK 594
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +Y + + ++ TY L+ + G ID+A L ++++G P Y
Sbjct: 595 VDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNT 654
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
IKG + + +E+ G P ++ L+
Sbjct: 655 RIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILV 691
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 60/127 (47%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G V ++L+ GL +AG ++ A + +M ++ P+L T+N+L++ + G ++
Sbjct: 572 DAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSID 631
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ ++ G D+ TY I + E LL+ ++ G P ++ ++
Sbjct: 632 KAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILV 691
Query: 123 KGAFRRG 129
+ + G
Sbjct: 692 RAVIKYG 698
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K +P + + L+ G G ++ A + ++ G PD+ T+N+ I+ +C
Sbjct: 605 MKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNR 664
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMI 96
V + V G V T+ IL+ AV K G I
Sbjct: 665 TPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL + A + N+M+ +G P+ TF +LI+ CK+G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGK 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E Y + D+ TY LI + K G + +A LL + G P Y
Sbjct: 257 VDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR +A L EM +G
Sbjct: 317 LIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 377 LKPDNGTYTMIINEF--CKKEDV 397
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++SA + +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G +D AF L +V++ Y
Sbjct: 292 LKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P+ YT +I + AA L EM G
Sbjct: 352 LISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411
Query: 181 LTP 183
P
Sbjct: 412 HVP 414
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + +FN+L+ + G+++
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQG 190
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ ++ G DV TY +LI + K ++EA L + +++ G P + +I G
Sbjct: 191 FKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDG 250
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + L EM GL P
Sbjct: 251 HCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPD 310
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ + DG NC + DL E E ++
Sbjct: 311 KITYTTLIDG--NCKEGDLDSAFELRETMVK 339
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + T+ LI K G +D A ++ P Y
Sbjct: 222 MNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+++KG P++ YTTLI + G A M +
Sbjct: 282 LIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKES 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLK 378
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 2/196 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK GE+ ++ S+ K G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +D+ F+L + + G P Y+ +I G + + ++A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ KG PN +TTLI + G+ A +M P ++ + GL
Sbjct: 227 DLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAEKIEQLE 211
C K DL + + L+
Sbjct: 287 --CKKGDLKQAQDLLD 300
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 74/189 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G++ A + + +T ++E + K + Y + + G
Sbjct: 72 LINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + ++ + G P + ++ G R G D F
Sbjct: 132 YPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P+ Y+ LI + + EA + EM + GL P F + DG
Sbjct: 192 KLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLA 204
GK D A
Sbjct: 252 CKNGKVDSA 260
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KGF P V L+ G ++ A + +M ++ PD +T+N+L+ +C G
Sbjct: 336 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGR 395
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +++ + G D+ TY IL+ ++ K ++EA LL + NP +Y
Sbjct: 396 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNI 455
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G R G+ + A FS + KG P+ Y +I + G EA MEM
Sbjct: 456 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 515
Query: 181 LTPISRCFDLVTDGL 195
+P ++ + G
Sbjct: 516 CSPDGCTYNTIARGF 530
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V L G + A ++V+ MI++G +PD+ T+ +L++ C E++ V+++ + + G
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 340
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV +Y LI K ID+A L + P Y ++ G G+ DA
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAI 400
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +G P+ Y+ L+ + EA L + L P + ++++ DG+
Sbjct: 401 ALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 460
Query: 196 KNCGKHDLAEKI 207
G+ + A +
Sbjct: 461 CRAGELEAARDL 472
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K + P + + L+ GL + G L+ A + ++M+ +G PDL T++ L++++CK+
Sbjct: 371 MCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRH 430
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + ++ D+ Y I+I + +AG ++ A L NL G +P Y
Sbjct: 431 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 490
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +RG ++A F E+ P+ Y T+ + + A L EM G
Sbjct: 491 MIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550
Query: 181 LTPISRCFDLVT 192
+ S CF +++
Sbjct: 551 FSADS-CFLMLS 561
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + LV L N + ++N+M+ PD+ F+++++ +CK G+
Sbjct: 231 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 290
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+ + + G DV TY L+ +DEA ++ +V G P Y
Sbjct: 291 VTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 350
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F E+ K P+ Y TL+ GR +A EM G
Sbjct: 351 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P + ++ D L C L E + L+
Sbjct: 411 QMPDLVTYSILLDSL--CKNRHLEEAMALLK 439
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G ++ A ++ + M+++G PD+ ++ +LI CK +
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ +C+ D TY L+ + G + +A L H +V G P Y+
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + ++A I+ P+ VY +I R G A + ++ G
Sbjct: 421 LLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 480
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++++ GL G + A K+
Sbjct: 481 LHPSVWTYNIMIHGLCKRGLLNEANKL 507
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L+ + + A ++ K++K G PD TF +LI +C G+
Sbjct: 91 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G +V TY LI + K G A RLL ++ + P +Y
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + Q +AF FS++ +G P+ YT+L+ + L +M
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F V D L GK A +I
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEI 297
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+GF P V L+ GL G +A +++ M + PD+ + S+I+++CK +
Sbjct: 161 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 220
Query: 61 VEFCVEMYYSVCKLGSCADVSTY--------------------------KIL-------- 86
V ++ + G D+ TY KIL
Sbjct: 221 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 280
Query: 87 -IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+ A+ K G + EA ++ +++ G P Y ++ G + + D+A F + KG
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 340
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
P+ YTTLI + + +A EM P ++ ++ + GL + G+
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGR 395
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ + + + + +M G P++ T N LI + C V F + + KLG
Sbjct: 71 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 130
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D +T+ LI + G I EA L ++++G P Y +I G + G A
Sbjct: 131 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 190
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++ P+ +YT++I + + EA N +M G++P
Sbjct: 191 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 238
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
L+ L+ A N+++ P + F L+ +I K + + + G +V
Sbjct: 41 LHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNV 100
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T ILI + + AF +L +++ GH P P+ + +I+G G+ +A F +
Sbjct: 101 YTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDK 160
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ +G PN Y TLI + G A L M + P + + D L
Sbjct: 161 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 215
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 184 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY L + K G + +A L+ + G P Y
Sbjct: 244 VDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + VYT LI+ + GR V+A L EM +G
Sbjct: 304 LIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 363
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 364 LKPNXGTYTMIINEF--CKKGDV 384
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 149 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESK 208
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 209 MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 268
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 269 LTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQEN 328
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 329 IRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLK 365
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P+ +++ L+ Y + ++++ G L FN L+ CK G++
Sbjct: 84 FWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGDIRLAQ 143
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ + G +DE FRL + + G P Y+ +I G
Sbjct: 144 SVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGL 203
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ KG PN +TTLI + GR A +M L+P
Sbjct: 204 CKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 263
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ +T GL C K DL +
Sbjct: 264 ITYNTLTYGL--CKKGDLKQ 281
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+L +CK G+
Sbjct: 219 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGD 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ +Y
Sbjct: 279 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTA 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + G+ DA E+ G PN YT +I + G + L EM
Sbjct: 339 LISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + +FN+L+ + G+++
Sbjct: 118 GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 177
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L +++ G P + +I G
Sbjct: 178 FRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 237
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TL + G +A + + EM+ GL P
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPD 297
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + D+ E
Sbjct: 298 KITYTTLIDGC--CKEGDMETAFEH 320
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G V + ++ G+ G+++SA ++++ M G PD+ T+N+L++ +C + +
Sbjct: 112 MSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQ 171
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + D T+ +I + + G+I +AF + + E G NP + Y+
Sbjct: 172 WEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYST 231
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G+ + A +E+ KG+ ++ +Y L + + E + ++ + G
Sbjct: 232 IIGGLAKAGKMEQALELLNEMASKGYNTDK-MYQLLTESLNKEDKIEEVVQVVHKLQDSG 290
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
++P + F+ V L GK D A
Sbjct: 291 ISPQTVLFNTVLLVLCRNGKTDYA 314
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + +++GL + A++++++M+++ P+ T N ++ T+ + G ++
Sbjct: 45 RGCKPNTVNYNTVLKGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQK 104
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ K G A+V TY +I + + G +D A LL N+ G P Y ++K
Sbjct: 105 VTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLK 164
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G Q++DA ++ P+ + T+I+ + G ++A +M E G P
Sbjct: 165 GLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNP 224
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
S + + GL GK + A
Sbjct: 225 NSTTYSTIIGGLAKAGKMEQA 245
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 8 PPVRGR-DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
PP +++V L G L+ + + KM K G ++ T+N++I +C+ G V+ +E
Sbjct: 83 PPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALE 142
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ ++ G D+ TY L+ + A ++A L+ + ++ P + II
Sbjct: 143 LLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLC 202
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
++G AF F ++ KG PN Y+T+I + G+ +A L EM G +
Sbjct: 203 QKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNT-DK 261
Query: 187 CFDLVTDGLKNCGKHDLAEKIEQL 210
+ L+T+ L K D E++ Q+
Sbjct: 262 MYQLLTESL---NKEDKIEEVVQV 282
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L++GL +A E A++++ KM + PD TFN++I +C+ G
Sbjct: 147 MQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGL 206
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + G + +TY +I ++KAG +++A LL+ + G+N +Y
Sbjct: 207 ILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNT-DKMYQL 265
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + + + ++ +++ G P ++ T++ + R G+ A + L +M G
Sbjct: 266 LTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYG 325
Query: 181 LTPISRCFDLVTDGL 195
P + ++ +GL
Sbjct: 326 CMPDELTYIILIEGL 340
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
+V TY ++I A+ + G +D+A LL++L G P Y ++KG ++ DA
Sbjct: 15 NVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELL 74
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNC 198
E+ + PPN ++ R G + YL +M++ G T ++ V G+
Sbjct: 75 DEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQ 134
Query: 199 GKHDLA 204
G D A
Sbjct: 135 GHVDSA 140
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 81/196 (41%), Gaps = 35/196 (17%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS-------------------V 71
++++ M +G +P++ T+N +I+ +C+ G+V+ E+ S +
Sbjct: 2 ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61
Query: 72 CKLGSCADV----------------STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
C + D +T +++ +S+ G++ + R L + + G
Sbjct: 62 CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME 175
Y +I G +G D A S ++ G P+ Y TL+ ++ +A +++
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181
Query: 176 MTEMGLTPISRCFDLV 191
M++ P + F+ +
Sbjct: 182 MSQNDCLPDNVTFNTI 197
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG+N + LL + L +E Q+V+K+ G P FN+++ +C++G+
Sbjct: 252 MASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGK 310
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
++ +++ + G D TY ILI +S G + EA L+ L
Sbjct: 311 TDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL 356
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +++GL + E A++++ +M+ PD TFN+++ ++C+ G V+
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + + G D+ TY +I + ID+A LL +L G P + ++KG
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+++DA + + PP+ + T+IT + G +A L M E G P
Sbjct: 576 LCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPN 635
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
S + +V D L GK A
Sbjct: 636 SSTYSIVVDALLKAGKAQAA 655
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L + + ++++ +M PD TFN+++ ++C+ G V+ +E+ + + G
Sbjct: 362 VLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG 421
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
AD+ TY ++ + G +D+A LL L G P Y ++KG Q++ A
Sbjct: 422 CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+E+ PP+ + T++ + G A + +M+E G +P ++ + DGL
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541
Query: 196 KN 197
N
Sbjct: 542 CN 543
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 2/181 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P ++V LL AG ++A ++++ M PDL T+N++I + K+G+
Sbjct: 627 MAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTN--GTPDLITYNTVISNLTKAGK 684
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G C D +TY+ L V + D A R+L + + G +P + Y
Sbjct: 685 MEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYND 744
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + D A F+ + G P+ Y L+ GG EA L + +G
Sbjct: 745 VLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804
Query: 181 L 181
+
Sbjct: 805 V 805
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 88/183 (48%), Gaps = 2/183 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G +P + + ++ GL N ++ A ++++ + G PD+ TFN+L++ +C
Sbjct: 522 MSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDR 581
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ ++ + D T+ +I ++ + G++ +A L + E+G P S Y+
Sbjct: 582 WEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSI 641
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G+ A S + P+ Y T+I+ + G+ EA + L M G
Sbjct: 642 VVDALLKAGKAQAALELLS--GMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNG 699
Query: 181 LTP 183
L P
Sbjct: 700 LCP 702
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +V G AG +E A++++N M PD TFN LI +C G + + ++ +
Sbjct: 223 NTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY IL+ A K +A LL + G P Y +I G D+
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A S + G P+ YT ++ ++CG R+ E L EMT P F+ +
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCG-SERWKEVEELLAEMTSNNCAPDEVTFNTIV 398
Query: 193 DGLKNCGKHDLAEKI 207
L G D A ++
Sbjct: 399 TSLCQQGLVDRAIEV 413
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G + ++ GL + G ++ A ++++++ G PD + ++++ +C + +
Sbjct: 417 MSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQ 476
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + D T+ ++ ++ + G++D A R++ + E+G +P Y
Sbjct: 477 WERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNC 536
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
II G DDA S+++ G P+ + TL+ +CG R+ +A + M
Sbjct: 537 IIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGV-DRWEDAEQLMANMMRS 595
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P F+ V L C K L + IE L++
Sbjct: 596 NCPPDELTFNTVITSL--CQKGLLTQAIETLKI 626
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 7/202 (3%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
FNP L++ L G + A + + M+ +G P + T++ L++ CK +
Sbjct: 254 FNP-------LIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + G D+ TY +LI A+ G +DEA +L NL G P Y P++K
Sbjct: 307 ALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSL 366
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
++ + +E+ P+ + T++T + G A + M+E G
Sbjct: 367 CGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADI 426
Query: 186 RCFDLVTDGLKNCGKHDLAEKI 207
+ + DGL + G+ D A ++
Sbjct: 427 VTYSSILDGLCDVGRVDDAVEL 448
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 94/236 (39%), Gaps = 33/236 (13%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + + L++GL E A+Q++ M++ PD TFN++I ++C+ G +
Sbjct: 561 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQA 620
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAV---------------------------------S 91
+E + + G + STY I++ A+ +
Sbjct: 621 IETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLT 680
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
KAG ++EA LL +V +G P + Y + G R D A ++ G P+
Sbjct: 681 KAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTT 740
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
Y ++ R R A + M G P + ++ + L G D A+++
Sbjct: 741 FYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRL 796
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ L+ G ++ A + + M G P + N LI+ +C G V ++ + L
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAA---L 213
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS---LYAPIIKGAFRRGQF 131
G A V TY ++ +AG I++A RL++ + PFP + P+I+ RG+
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGM------PFPPDTFTFNPLIRALCVRGRI 267
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
DA F ++ +G P+ Y+ L+ + + +A L EM G P ++++
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327
Query: 192 TDGLKNCGKHDLAEKI 207
+ + N G D A I
Sbjct: 328 INAMCNEGDVDEALNI 343
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 36/246 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V +L+ A ++++M +G +PD+ T+N LI +C G+
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336
Query: 61 VE---------------------------FC-------VEMYYSVCKLGSCA-DVSTYKI 85
V+ C VE + +CA D T+
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
++ ++ + G++D A ++ ++ E G Y+ I+ G G+ DDA S +K G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ YTT++ ++ A + EM P F+ V L G D A
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516
Query: 206 K-IEQL 210
+ +EQ+
Sbjct: 517 RVVEQM 522
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +V L G ++ A ++V +M + G PD+ T+N +I+ +C ++ +E+ +
Sbjct: 500 NTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQS 559
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ T+ L+ + ++A +L+ N++ P + +I ++G
Sbjct: 560 CGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQ 619
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + G PN Y+ ++ + G+ A L MT TP ++ V
Sbjct: 620 AIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVIS 677
Query: 194 GLKNCGKHDLAEKIEQLEVS 213
L GK + A + ++ VS
Sbjct: 678 NLTKAGKMEEALDLLRVMVS 697
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + + L+ + G P Y
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 3/213 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ CK GE+
Sbjct: 97 FRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ S+ K G V ++ L+ K G +DE FRL + G P ++ +I G
Sbjct: 157 SVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L P
Sbjct: 217 CKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
++ + GL C K DL + + + E+S++ +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQXXDLIDEMSMKGL 307
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T + LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 222 MDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M B G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXG 411
Query: 181 LTP 183
P
Sbjct: 412 YXP 414
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ PN
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRXGYXPN 415
>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNK-MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++ GLLNAG + A ++ K M ++G P +ET+N++I + K E + + +
Sbjct: 493 IIAGLLNAGRSQEALNLLYKVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAFKRMLAA 552
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG--HNPFPSLYAPIIKGAFRRGQFD 132
G AD TY ++I + ++G+ID+A +L +++ H+ F +YA I+KG R G+ D
Sbjct: 553 GVAADSKTYTLIIDGLCESGLIDKAKKLWDDVIWPSRIHDDF--VYASILKGLCRAGKLD 610
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+A F E+ G PN Y +I + G EA + EM + GLTP
Sbjct: 611 EACHFLYELVDSGVSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLTP 661
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V + ++ GL E A + +M+ G D +T+ +I+ +C+SG
Sbjct: 514 MHEKGISPGVETYNAVIHGLFKLQLAEEAMRAFKRMLAAGVAADSKTYTLIIDGLCESGL 573
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ V D Y ++ + +AG +DEA L+ LV+ G +P Y
Sbjct: 574 IDKAKKLWDDVIWPSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSGVSPNIISYNI 633
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+I A + G +A+ +E++ G P+ + L
Sbjct: 634 VIDSACKLGMKREAYQVVTEMRKNGLTPDAVTWRIL 669
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + ++ GL A Q+ + I+ G P T+ L+E +C+ +
Sbjct: 337 MKKKGLTPSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMD 396
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ Y I + A+ E +L ++++ P
Sbjct: 397 LDKARRIVEAMLNKDGVDRTRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDVITLNT 456
Query: 121 IIKGAFRRGQFDDAFCFFSEIKI-KGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTE 178
++ G + + ++A +++ + K P+ +TT+I GR EA N L + M E
Sbjct: 457 VVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTIIAGLLNAGRSQEALNLLYKVMHE 516
Query: 179 MGLTPISRCFDLVTDGL 195
G++P ++ V GL
Sbjct: 517 KGISPGVETYNAVIHGL 533
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 8/174 (4%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A +++ MI +G P++ TF SL+ C+ GEV +++ + + + TY +LI
Sbjct: 184 AHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIR 243
Query: 89 AVSKAGMIDEAFRLLHNLV------EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ + G + L+ NL E + + + +I R G +D F ++
Sbjct: 244 GLLRQGDFEHGRELMCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIAEDMP 303
Query: 143 IKGHPPNRP-VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+G N+ Y +I R G+ A+ + M + GLTP ++ + GL
Sbjct: 304 -QGKSVNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGL 356
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKM--IKQGSDPDLETFNSLIETICKSGEVEFCV 65
P R ++L+ LL++ Y + ++ ++ +K P L +N I C+ + +
Sbjct: 126 PDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQPDVAH 185
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + G C +V T+ L+ + G + A++L + E P Y+ +I+G
Sbjct: 186 RLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGL 245
Query: 126 FRRGQFD 132
R+G F+
Sbjct: 246 LRQGDFE 252
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 2/176 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P ++ L +A + A I PD T N LI + S
Sbjct: 88 GYRPDSLNFSSIIHALCDAKRFKEAHHRFLLCIASDCVPDERTCNVLIARLLDSQYPHAT 147
Query: 65 VEMYYSV--CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + Y + K + Y I + D A RLL +++ GH P + ++
Sbjct: 148 LHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQPDVAHRLLFDMISRGHCPNVVTFTSLL 207
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
G R G+ +A+ F E++ PN Y+ LI R G F + + E
Sbjct: 208 TGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLLRQGDFEHGRELMCNLWE 263
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 4/177 (2%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA-DVSTYK 84
++ A +++ + G PD F+S+I +C + + + +C C D T
Sbjct: 74 VDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKE-AHHRFLLCIASDCVPDERTCN 132
Query: 85 ILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIK 142
+LI + + +L+ L PSL Y I Q D A ++
Sbjct: 133 VLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQPDVAHRLLFDMI 192
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+GH PN +T+L+T R G A EM E + P S + ++ GL G
Sbjct: 193 SRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLLRQG 249
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ CK GE+
Sbjct: 97 FRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ S+ K G V ++ L+ K G +DE FRL + G P Y+ +I G
Sbjct: 157 SVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A +M L P
Sbjct: 217 CKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 222 MDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + L G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLK 378
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YLP 414
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ PN
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYLPN 415
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MSDKG P V ++L+ GL G L+ A ++ +M + G P + T+N+L+ CK G
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283
Query: 61 VEFCVEMY-YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ +E+ Y +CK G ADV TY + I + +A+ LL + ++ +P Y
Sbjct: 284 YKAAIELIDYMICK-GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 342
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ A F+E+ PN Y LI G F EA L M
Sbjct: 343 TLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 402
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK-IEQLEVS 213
GL + + +GL K +LA++ +E++ V+
Sbjct: 403 GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVN 437
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V L+ G G ++SAK+++ +M + G + +++LI C+ G
Sbjct: 469 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 528
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++Y + G AD T +L+ ++ + G + EA + L ++ G P Y
Sbjct: 529 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 588
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
II G G +AF FF ++ G P+ Y +L+ +GG VEA +L
Sbjct: 589 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 641
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P D ++ G + G +A + MIK G P T+ SL++ +CK G
Sbjct: 574 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 633
Query: 61 V----EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ +F ++Y + D Y L+ K+G + EA L +V++ P
Sbjct: 634 LVEAKKFLNRLHY----IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 689
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP-PNRPVYTTLITMCGRGGRFVEAANYLME 175
Y+ ++ G R+G+ A C F +G PN +YT L+ + G A + E
Sbjct: 690 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 749
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGK 200
M + G P + F+ + D G+
Sbjct: 750 MMKKGTCPDTVAFNAIIDSCSRRGQ 774
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC-ADVS 81
+G L A + +KM++ PD T++SL+ +C+ G+ V ++ + G+ +
Sbjct: 666 SGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 725
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
Y L+ +SKAG AF +++ G P + II RRGQ A FFS +
Sbjct: 726 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ G PN Y L+ + + + M G+ P F + GL G
Sbjct: 786 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845
Query: 202 DLAEKI 207
DL K+
Sbjct: 846 DLGVKL 851
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ G L + + M+++G PD TF+SLI + KSG
Sbjct: 785 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 844
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V++ + G+ AD T+ ILI S++G + +AF L++ + G P Y
Sbjct: 845 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 904
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G ++ F ++ E+ G P Y TLI R G A EM +G
Sbjct: 905 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 964
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ GL +CGK
Sbjct: 965 FGSHEVAESAMVRGLLHCGK 984
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL E AK+++ +M + LI+ +CK+G ++ V++ ++ K G
Sbjct: 414 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + G I A ++ + G +Y+ +I + G +A
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ + GH + L++ R G+ EA +L M+ +GL P S +D + +G
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593
Query: 196 KNCG 199
+ G
Sbjct: 594 GSIG 597
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 87/180 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV GL AG+ ++A +M+K+G+ PD FN++I++ + G++ + + ++ G
Sbjct: 730 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 789
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
C +++TY IL+ SK + L ++ +G P + +I G + G D
Sbjct: 790 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 849
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ ++G ++ + LI G+ +A + + M +G+ P ++ + +GL
Sbjct: 850 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 909
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ GL +G + +++ KMI +G+ D TFN LI +SG+
Sbjct: 820 MMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGK 879
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + LG D TY + ++K E+ +LH ++E+G P + Y
Sbjct: 880 MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYIT 939
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF E++ G + + ++ G+ +A L M M
Sbjct: 940 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 999
Query: 181 LTPISRCF 188
L P F
Sbjct: 1000 LLPTIATF 1007
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ G + A + M G P+L T+N L+ K
Sbjct: 750 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 809
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y ++ + G D T+ LI +SK+G+ D +LL ++ +G +
Sbjct: 810 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 869
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ AF + + G P+R Y + + F E+ L EM E G
Sbjct: 870 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 929
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + + +G+ G A K++
Sbjct: 930 VIPKHAQYITLINGMCRVGDIQGAFKLK 957
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLL++ L G ++ A + + G P + T N ++ ++ K E ++ +
Sbjct: 167 DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSD 226
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G C +V T+ ILI + G + +A LL + E+G P Y ++ ++G++
Sbjct: 227 KGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKA 286
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + KG + Y I R +A L +M + ++P ++ + +
Sbjct: 287 AIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLIN 346
Query: 194 GLKNCGKHDLAEKI 207
G GK +A ++
Sbjct: 347 GFVKEGKIGVAAQV 360
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V ++ + L A ++ KM K+ P+ T+N+LI K G++
Sbjct: 297 KGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 356
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + K + TY LI G +EA RLL ++ G Y ++
Sbjct: 357 AAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLN 416
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + +F+ A +++ YT LI + G EA + M + G+ P
Sbjct: 417 GLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNP 476
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +G G A++I
Sbjct: 477 DVITYSSLINGFCRVGNIKSAKEI 500
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 2/198 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ +G + A +VN M G PD +T+N + + K + + + +
Sbjct: 868 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 927
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + Y LI + + G I AF+L + G + +++G G+ +D
Sbjct: 928 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 987
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + P +TTL+ R + EA M GL ++++
Sbjct: 988 AMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIM 1047
Query: 194 GLKNCGKHDLAEKIEQLE 211
G+ C D A E E
Sbjct: 1048 GM--CANGDSAAAFELYE 1063
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 35/145 (24%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF +V+GLL+ G E A +++ M++ P + TF +L+ C+ +
Sbjct: 960 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1019
Query: 61 VEFCVEM--------------YYSVCKLGSCA---------------------DVSTYKI 85
+ +++ Y+V +G CA +++TY +
Sbjct: 1020 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1079
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDG 110
L+ A+S A + + +LL +L E G
Sbjct: 1080 LVDAISAANNLIQGEKLLTDLQERG 1104
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 2/159 (1%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ LI K G +++ VE + V +G V T +++ ++ K + + L +
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+ G P + +I G G A +++ G P Y TL+ + GR+
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
A + M G+ +++ D L C H A+
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNL--CTNHRSAK 321
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + L+ G L+ G + +M+ +M G PD T+ SL+ +C +G
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ S+ + G +V+ Y ILI + G + E LL+ +VE+G +P ++
Sbjct: 324 CREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I ++ D+A F+++K +G P+ Y LI + GR +A +M G
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK--IEQLEVSLR 215
+ P F+ + GL K + A++ E L +R
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + LV GL E AK+ +M+ QG PD+ FN+++ +C G+
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + ++G+ V +Y LI G IDEA + L ++ G P Y
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ DDA+ F E+ G P Y+T++ RF EA + M G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
++++ +GL D A K+ Q
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQ 647
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V L+ L G ++ A N+M+ +G P++ FNSL+ +C +
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E Y+ + G DV + ++ + G + +A RL+ + G P Y
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A + G P+ Y TL+ R GR +A EM G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 181 LTPISRCFDLVTDGL 195
+TP + + GL
Sbjct: 584 ITPGVVTYSTILHGL 598
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P V ++ GL A ++ A+ + +MI +G PD +T+N LI G+
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V M + G D TY L+ + G EA L +++ G P ++Y
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGI 348
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +G + + + G P+ ++ + T + EA + +M + G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L+P + + D L G+ D A
Sbjct: 409 LSPDVVNYGALIDALCKLGRVDDA 432
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++ G G ++ A + +M+ +G P++ T+ ++I+ +CK+ V+ +
Sbjct: 201 PNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D TY LI G E R+L + G P Y ++
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +A F + KG PN +Y LI G E + L M E GL+P
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380
Query: 188 FDLV 191
F+++
Sbjct: 381 FNII 384
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G AG ++ A + +M++ G P + T+++++ + +
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y ++ G ++ Y I++ +SK +DEAF+L +L + +
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I F+ G+ +DA F+ I G P+ Y + G E + M + G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 181 LTPISRCFDLVTDGLKNCG 199
TP SR + + L + G
Sbjct: 724 TTPNSRMLNALVRRLLHRG 742
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G G L ++N M++ G PD FN + K
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + G DV Y LI A+ K G +D+A + ++ +G P ++
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +++ A F+ E+ +G P+ + T++ G+ ++A + M +G
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
P + + G G+ D A K
Sbjct: 514 TRPGVISYTTLIGGHCLVGRIDEAAK 539
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ G G ++ A + ++ M+ G PD T+N+L+ C++G
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G V TY ++ + EA L N++ G +Y
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + D+AF F + K + +I + GR +A + ++ G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688
Query: 181 LTPISRCFDLVTDGL 195
L P + L+ + L
Sbjct: 689 LVPDVFTYCLIAENL 703
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ GL AK++ MI G ++ +N ++ + K+
Sbjct: 579 MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNC 638
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ S+C +++T+ I+I A+ K+G ++A L + G P Y
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCL 698
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I + G ++ FS ++ G PN + L+ G A YL ++ E
Sbjct: 699 IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDE 756
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 7/210 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI-KQGSD--PDLETFNSLIETICK 57
M + G P V + L++G N E A ++++ M QG P++ ++ +I
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFT 215
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G+V+ ++ + G +V TY +I + KA ++D A + +++ G P
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I G G++ + E+ G P+ Y +L+ GR EA M
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335
Query: 178 EMGLTPISRCFDLVTDGLKNCGK----HDL 203
G+ P + ++ G G HDL
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDL 365
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 7/190 (3%)
Query: 27 ESAKQMVNKMIKQGS---DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
E + N+MI++ + PD T++ LI C+ G +E + + K G +
Sbjct: 73 ELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVI 132
Query: 84 KILIPAVSKAGMIDEAFRLL-HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF---S 139
L+ + A + EA +L + E G P Y ++KG + ++A +
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
+ + + PPN Y +I G+ +A N +EM + G+ P + V DGL
Sbjct: 193 DSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 200 KHDLAEKIEQ 209
D AE + Q
Sbjct: 253 VVDRAEGVFQ 262
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/149 (18%), Positives = 64/149 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ GL ++ A ++ + + ++ TFN +I + KSG E + ++ ++
Sbjct: 627 NIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY ++ + + G ++E L + + G P + +++ RG
Sbjct: 687 YGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITR 746
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
A + ++ K LI++ R
Sbjct: 747 AGAYLCKLDEKNFSLEASTTAMLISLLSR 775
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ G + A+++ ++M+ Q DP++ T+ ++I +C+ G
Sbjct: 177 MLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGC 236
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ + G + TY +L+ + ++ A L L++ G NP ++
Sbjct: 237 IGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTT 296
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + +F +A F E+ G P PVY +L+ R G EA EMT +G
Sbjct: 297 LIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLG 356
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L P +V GL + G+ +A++ Q
Sbjct: 357 LCPDEFTCSIVVRGLCDGGQMHVADRFLQ 385
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + ++ GL+ A A ++ ++M+++G P + T+N+LI G V E+
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + +V TY +I A+ + G I +A RL + E G P Y ++ G +
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
R + A + E+ G PN ++TTLI + RF EA +EM G+ P
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328
Query: 188 FDLVTDGLKNCGKHDLAEKIEQ 209
++ + DG G A + Q
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQ 350
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 95/240 (39%), Gaps = 37/240 (15%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
G NP L+ G A AK M +M + G P + +NSL++ +SG +
Sbjct: 285 SGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQE 344
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHN----------- 112
+ +Y + +LG C D T I++ + G + A R L + EDG N
Sbjct: 345 ALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALID 404
Query: 113 ------------------------PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
P Y+ +I G +RG+ A ++E+ KG P
Sbjct: 405 EYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEP 464
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
N YT LI + G A EM E G++P + ++ DGL C ++ + E +
Sbjct: 465 NVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGL--CRENRVQEAVR 522
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G N + L+ G LE A +M + G +P++ +++SLI+ K G+
Sbjct: 387 VQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGK 446
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +Y + G +V TY LI +K G ID AFRL ++E+G +P +
Sbjct: 447 MQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSV 506
Query: 121 IIKGAFRRGQFDDAFCF---------------FSEIKIKGH--PPNRPVYTTLITMCGRG 163
++ G R + +A F FS I+ PN +Y TLI
Sbjct: 507 LVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLD 566
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
G+ EA M + G+ P S + L+ G
Sbjct: 567 GQHCEAGKLFSYMRKSGMIPDSFTYTLLIRG 597
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P ++V+GL + G + A + + + + G + + +N+LI+ C+ G
Sbjct: 352 MTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGN 411
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + ++G +V +Y LI SK G + A + +V G P Y
Sbjct: 412 LEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTA 471
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF E+ G PN + L+ R R EA ++ME + +
Sbjct: 472 LIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLK 531
Query: 181 LTPISRCFDLVT 192
+ I F T
Sbjct: 532 CSDIHSVFSNFT 543
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 83/207 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++L+ G + SA + +++K G +P+ F +LI+ CK+
Sbjct: 247 MKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKR 306
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
M+ + + G V Y L+ ++G EA L + G P +
Sbjct: 307 FSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSI 366
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G GQ A F ++ G N Y LI R G EA MTE+G
Sbjct: 367 VVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVG 426
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + DG GK +A I
Sbjct: 427 IEPNVVSYSSLIDGHSKRGKMQIAMAI 453
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 23/170 (13%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ G G +++A ++ +MI+ G P+ T + L++ +C+
Sbjct: 457 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENR 516
Query: 61 VEFCVE--MYYSVCKLGSCADVST------------------YKILIPAVSKAGMIDEAF 100
V+ V M YS K C+D+ + Y LI + G EA
Sbjct: 517 VQEAVRFVMEYSGLK---CSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAG 573
Query: 101 RLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
+L + + G P Y +I+G G +A ++++ G P R
Sbjct: 574 KLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTR 623
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P V L++GL +G +E A + M+K G PD+ N+LI K+G
Sbjct: 262 MKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGR 321
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAV--SKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
+E ++++ + L +V TY +I A+ SKA EA + +G P Y
Sbjct: 322 LEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAP-ASEAASWFEKMKANGVTPSSFTY 380
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ +I G + + + A E+ KG PP Y +LI G+ R+ A +E+ E
Sbjct: 381 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKE 440
Query: 179 MGLTPISRCFDLVTDGLKNCGK 200
+R + ++ L CG+
Sbjct: 441 NCGRSSARIYAVMIKNLGKCGR 462
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF P L+ L A E+A ++ ++ + + +I+ + K G
Sbjct: 403 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGR 462
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+++ + K+G DV Y L+ + +AGMI+EAF L + E+G P + +
Sbjct: 463 PSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNI 522
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G R G+ + A F ++K P+ Y T++ R G F EAA + EM G
Sbjct: 523 ILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRG 582
Query: 181 L 181
Sbjct: 583 F 583
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + L+ +G E A +V +M +G P + T+ LI+ + KSG
Sbjct: 228 MKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGR 286
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ ++ K G DV LI KAG +++A +L + P Y
Sbjct: 287 VEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNT 346
Query: 121 IIKGAFR-RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+IK F + +A +F ++K G P+ Y+ LI + R +A L EM E
Sbjct: 347 VIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 406
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + + + L +++ A ++
Sbjct: 407 GFPPCPAAYCSLINALGKAKRYEAANEL 434
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLES-AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
P V + +++ L + S A KM G P T++ LI+ CK+ VE +
Sbjct: 339 PNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALL 398
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + + G + Y LI A+ KA + A L L E+ +YA +IK
Sbjct: 399 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLG 458
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ +A F+E+K G P+ Y L++ R G EA + L M E G TP
Sbjct: 459 KCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLN 518
Query: 187 CFDLVTDGLKNCGKHDLAEKI 207
+++ +GL G+ + A ++
Sbjct: 519 SHNIILNGLARTGRPEQATEM 539
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V + L+ GL+ AG +E A + M + G PDL + N ++ + ++G
Sbjct: 473 MKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGR 532
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E EM+ + D +Y ++ ++S++GM +EA +L+ + G Y+
Sbjct: 533 PEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSS 592
Query: 121 IIKGAFRRGQFDD 133
I++ + + D+
Sbjct: 593 ILEAVGKVDEDDE 605
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 72/148 (48%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++ L G A + N+M K G +PD+ +N+L+ + ++G +E ++ +
Sbjct: 452 VMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEEN 511
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D++++ I++ +++ G ++A + + + P Y I+ R G F++A
Sbjct: 512 GCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEA 571
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGR 162
E+ +G + Y++++ G+
Sbjct: 572 AKLMREMGSRGFEYDHITYSSILEAVGK 599
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 68/178 (38%), Gaps = 44/178 (24%)
Query: 31 QMVNKMIK-------QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC-ADVST 82
+MVNK + + P T+NS+I + + G E E+Y+ +C G C D T
Sbjct: 145 KMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMT 204
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y +L+ A K G D A RL F E+K
Sbjct: 205 YSVLVSAFVKLGRDDYAIRL-----------------------------------FDEMK 229
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
G P +YTTL+ + + G +A + EM + G P + + GL G+
Sbjct: 230 ANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGR 286
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A +M ++M+ +G P+ TF +LI+ CK+G
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 246 VDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + YT LI+ + R+++A L EM +G
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVG 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 366 LKPDTGTYTMIINEF--CKKGDV 386
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G ++ ++ N M G PD+ T++ LI +CK +
Sbjct: 151 ITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESK 210
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ EM+ + G + T+ LI K G +D A + ++ P Y
Sbjct: 211 MDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNT 270
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 271 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEX 330
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL ++ AEK+ E L V L+
Sbjct: 331 IRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLK 367
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWG 155
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + + G P Y+ +I G + + DDA
Sbjct: 156 LRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDAN 215
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 216 EMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGL 275
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 276 --CKKGDLKQ 283
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + N + K G P + +FN+L+ + G+++
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEG 179
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A + +++ G P + +I G
Sbjct: 180 FRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDG 239
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 300 KITYTTLIDGC--CKEGDLETAFEH 322
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 221 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGD 280
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 281 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTA 340
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + ++ DA E+ G P+ YT +I + G + L EM
Sbjct: 341 LISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 61 LITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + + G P + ++ G R G D+ F
Sbjct: 121 YPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGF 180
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 181 RLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGH 240
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 241 CKNGRVDLAMEI 252
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + + G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + YT LI+ + GR+++A L EM +G
Sbjct: 317 LIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 377 LKPDTITYTMIINEF--CKKGDV 397
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G A E+ +KG P++ YTTLI + G A + M +
Sbjct: 282 LIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G++ AEK+ E L V L+
Sbjct: 342 IQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLK 378
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + G P Y+ +I G + + DDA
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ KG PN +TTLI + GR A +M L+P ++ + GL
Sbjct: 227 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CRKGDLKQ 294
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 2/196 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + N + K G P + +FN+L+ + G+++ + ++
Sbjct: 140 NILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L +++ G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI R G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIEQ 209
G C + DL E
Sbjct: 320 G--XCKEGDLETAFEH 333
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + + G P + ++ G R G D+ F
Sbjct: 132 YPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G LE+A + +MI++ D + +LI +C+ G
Sbjct: 302 MSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGR 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
++ + +G D TY ++I K G + +LL + DG P
Sbjct: 362 YLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMP 414
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ N+M+ G P+ TF +LI+ CK+G
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + G D+ TY LI + K G + +A L+ + P Y
Sbjct: 257 VDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L M +G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + + ++ + C K D+
Sbjct: 377 LKPDNGTYTMIINEF--CKKGDV 397
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + L+ G +P Y
Sbjct: 222 MDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +K P++ YTTLI + G A Y M +
Sbjct: 282 LIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + GL G+ AEK+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + +FN+L+ + G+++ + ++
Sbjct: 140 NILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +DEA L + ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ +G P+ Y TLI + G +A + + EM+ L P + + D
Sbjct: 260 AMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G +C + DL E
Sbjct: 320 G--SCKEGDLETAFE 332
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK GE+ ++ ++ K G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWG 166
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V ++ L+ + G +DE FRL + G P Y+ +I G + + D+A
Sbjct: 167 LRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAN 226
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ G PN +TTLI + GR A ++ G +P ++ + GL
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGL 286
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 287 --CKKGDLKQ 294
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P + + L+ GL G L+ A+ ++++M + PD T+ +LI+ CK G++E
Sbjct: 270 QGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLET 329
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E + K D Y LI + + G +A ++L ++ G P Y II
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIIN 389
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPP 148
++G E+ GH P
Sbjct: 390 EFCKKGDVKTGSKLLKEMXRDGHVP 414
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G++ A + + +T ++E + K + Y + + G
Sbjct: 72 LITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G + A + + + G P + ++ G R G D+ F
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + EA EM + GL P F + DG
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ DLA +I
Sbjct: 252 CKNGRVDLAMEI 263
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS K P L+ G G LE+A + +MIK+ D + +LI +C+ G
Sbjct: 302 MSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
+M + +G D TY ++I K G + +LL + DGH P
Sbjct: 362 SVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVP 414
>gi|357486821|ref|XP_003613698.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515033|gb|AES96656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P ++L+ G G ++ A++M+++M + G P + + S++ C++
Sbjct: 145 MLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANN 204
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + D+ + +++ K G ++EA + + DG + + Y+
Sbjct: 205 VDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSS 264
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I F+ ++ +A +++++ +G P+ +Y +I + GR EAA L EMT++G
Sbjct: 265 LINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
LTP + C++ V GL + G + A+ + +LE+S +V
Sbjct: 325 LTPDAYCYNAVIQGLCDVGLLNRAQSL-RLEISEHNV 360
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 55/244 (22%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE-----FC----- 64
+L+ + G + A+++ N+M K G +P + TFN+LI +CK+ +E FC
Sbjct: 365 ILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVG 424
Query: 65 ----------------------VEMYYSVCKLGSCA---------------DVSTYKILI 87
++ +C+ G D+ TY IL+
Sbjct: 425 RRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILL 484
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
A+ ++ A+ L + G+ +P Y IIKG F + D+AF F ++ G
Sbjct: 485 NALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGS 544
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 206
P VY TL+T R + A + + + P SR D + K+ EK
Sbjct: 545 EPTLSVYRTLMTCLCRKSKVSRA--FTLYFEHLKSLP-SR----DNDSISALEKYLFGEK 597
Query: 207 IEQL 210
+EQ+
Sbjct: 598 LEQV 601
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++++GL G + A +M+ +M + G PD +N++I+ +C G
Sbjct: 285 MFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGL 344
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + C T+ ILI + K GM+ EA L + + + G P +
Sbjct: 345 LNRAQSLRLEISEHNVC----THTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNT 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL---MEMT 177
+I G + + A F ++++ ++ +++ G+ ++A L EM
Sbjct: 401 LINGLCKANNLEKAKNLFCKLEVGRR------HSLHLSLSQGSGQVSDSARLLKKAKEMC 454
Query: 178 EMGLTPISRCFDLVTD 193
E G I R + L+TD
Sbjct: 455 EAG--QILRAYKLITD 468
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +++++GL A E A++++ +M +G P++ TFN LI +C+ G VE
Sbjct: 46 GGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 105
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + K G + +Y L+ A K +D+A + +V G P Y ++
Sbjct: 106 MEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTA 165
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ D A ++K KG P Y T+I + G+ EA L EM GL P
Sbjct: 166 LCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPD 225
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + GL C + + E I
Sbjct: 226 IITYTTIASGL--CREDKIEEAI 246
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P V ++L+ L G +E A +++ ++ K G P+ ++N L+ CK +
Sbjct: 77 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 136
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ +Y L+ A+ + G +D A LLH L G +P Y
Sbjct: 137 MDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNT 196
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A E+ KG P+ YTT+ + R + EA ++ +MG
Sbjct: 197 VIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMG 256
Query: 181 LTPISRCFDLVTDGL 195
+ P ++ + GL
Sbjct: 257 IRPTVVLYNAILLGL 271
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 95/200 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++++ G+ G ++ A + + + G +P+ ++N +++ + +
Sbjct: 7 MRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAER 66
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + G +V T+ +LI + + G+++ A +L + + G P Y P
Sbjct: 67 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNP 126
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + D A F + +G P+ Y TL+T R G A + L ++ G
Sbjct: 127 LLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKG 186
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+P+ ++ V DGL GK
Sbjct: 187 CSPVLISYNTVIDGLTKAGK 206
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 2/192 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ ++ A V M+ +G PD+ ++N+L+ +C++GEV+
Sbjct: 116 GCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVA 175
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G + +Y +I ++KAG EA LL ++ G P Y I G
Sbjct: 176 IDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASG 235
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT-LITMCGRGGRFVEAANYLMEMTEMGLTP 183
R + ++A F +++ G P +Y L+ +C R A + M G P
Sbjct: 236 LCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETH-NAIDLFSYMISNGCMP 294
Query: 184 ISRCFDLVTDGL 195
+ ++ +GL
Sbjct: 295 NESTYTILVEGL 306
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L G ++ A +++++ +G P L ++N++I+ + K+G+
Sbjct: 147 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGK 206
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G D+ TY + + + I+EA R + + G P LY
Sbjct: 207 TKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNA 266
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G +R + +A FS + G PN YT L+ G EA + L ++ G
Sbjct: 267 ILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRG 326
Query: 181 LT 182
+
Sbjct: 327 VV 328
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+ TY +++ + + G +D+A L NL G P Y ++KG F +++DA
Sbjct: 11 GCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDA 70
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ KG PPN + LI+ R G A L ++ + G TP S ++ +
Sbjct: 71 EKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHA 130
Query: 195 LKNCGKHDLAEKIEQLEVS 213
K D A +L VS
Sbjct: 131 FCKQKKMDKAMAFVELMVS 149
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ AG +++A +V+ M +G P + TFNS+++ +CK + E+
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ + DV ++ ILI + G ++EA + + + G P ++ +I
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
RG+ D A + E+K G P+ +YT +I R G EA EM +G P
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
++ + +GL C +H L + E L
Sbjct: 370 YNTLLNGL--CKQHRLLDAEELL 390
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P + + +++GL + AK++ M + PD+ +FN LI C+ GE
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ Y + + G DV ++ LI S G +D A L + G P +Y
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G +A E+ G P+ Y TL+ + R ++A L EM E G
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397
Query: 181 LTP 183
+TP
Sbjct: 398 VTP 400
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ GL L A++++N+M ++G PDL TF +LI C+ G E +++
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ DV Y LI + + G + +A L ++ P Y+ +I
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+GQ ++AF F E+ KG+ PN Y ++I R G + +L +M + + P
Sbjct: 485 KGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544
Query: 188 FDLVTDG 194
F+ + G
Sbjct: 545 FNTLIHG 551
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P VR ++L+ G G +E A + +M ++G PD+ +F+ LI G+++
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ LG D Y ++I +AG + EA R+ +V G P Y ++ G +
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ + DA +E+K +G P+ +TTLI R G F +A + L P
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439
Query: 188 FDLVTDGLKNCGKHDLAEKIE 208
++ + DG+ C K DLA+ E
Sbjct: 440 YNSLIDGM--CRKGDLAKANE 458
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ G AG + A ++ ++M+ G PD+ T+N+L+ +CK + E+ + +
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+ T+ LI + G ++A +L L+ P Y +I G R+G A
Sbjct: 397 GVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKA 456
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ ++ + PN Y+ LI G+ EA +L EM G P ++ + G
Sbjct: 457 NELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKG 516
Query: 195 LKNCG 199
G
Sbjct: 517 YCRSG 521
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+++V + + A ++++M K+ PD+ T N LI+ ++G+V+ + + S+
Sbjct: 161 NIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN 220
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + T+ ++ + K D+A + + + P + +I G R G+ ++
Sbjct: 221 KGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEE 280
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F+ E++ +G P+ ++ LI + G+ AA YL EM +GL P + +V
Sbjct: 281 AMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340
Query: 194 GLKNCGKHDLAEKIEQLEVSL 214
G G A ++ V L
Sbjct: 341 GFCRAGSMSEALRVRDEMVGL 361
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ G +E A +++M+ +G+ P++ T+NS+I+ C+SG V+ + + +
Sbjct: 477 ILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQD 536
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
D+ T+ LI K + AF + + + ++ P Y II G +G ++A
Sbjct: 537 NILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEA 596
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F ++ G P+R Y +LI G EA EM G P
Sbjct: 597 GRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + +++G +G ++ +Q + KM++ PDL TFN+LI K
Sbjct: 498 MVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEEN 557
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K D TY ++I S+ G ++EA R+ + G P Y
Sbjct: 558 MHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMS 617
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+I G G +AF E+ +G P+
Sbjct: 618 LINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L+ G ++ A + +M G PD + +I C++G
Sbjct: 288 MQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + LG DV TY L+ + K + +A LL+ + E G P +
Sbjct: 348 MSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTT 407
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G F+ A F + + P+ Y +LI R G +A +M
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
+ P + ++ D +C K + E
Sbjct: 468 IFPNHVTYSILIDS--HCEKGQVEE 490
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
P V + L+ G+ G L A ++ + M + P+ T++ LI++ C+ G+VE
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ G+ ++ TY +I ++G + + + L +++D P + +I G
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ AF F+ ++ + P+ Y +I G EA +M G+ P
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEP 610
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 1/161 (0%)
Query: 57 KSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
++G E Y V S + T I++ + K+ D+A ++ + + P
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ +I FR G D A + KG P + +++ + RF +A M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
+ + P R F+++ G G+ + A K + E+ R V
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYK-EMQQRGV 293
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + +++V G+ G ++ A + + + G +P+ ++N +++ +C +
Sbjct: 219 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + G +V T+ +LI + + G+++ A +L + + G P Y P
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++ + D A F + +G P+ Y TL+T R G A L ++ + G
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P+ ++ V DGL GK
Sbjct: 399 CAPVLISYNTVIDGLTKAGK 418
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P +++++GL A E A++++ +M ++G P++ TFN LI +C+ G VE
Sbjct: 258 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 317
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + K G + +Y L+ A K +D+A L +V G P Y ++
Sbjct: 318 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 377
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ D A ++K KG P Y T+I + G+ EA L EM GL P
Sbjct: 378 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 437
Query: 185 SRCFDLVTDGL 195
+ + GL
Sbjct: 438 IITYSTIAAGL 448
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ L G +E A +++ ++ K G P+ ++N L+ CK +
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G D+ +Y L+ A+ ++G +D A LLH L + G P Y
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A +E+ KG P+ Y+T+ R R +A ++ +MG
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 468
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
+ P + ++ + GL C + + I+
Sbjct: 469 IRPNTVLYNAIILGL--CKRRETHSAID 494
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ ++ A ++ M+ +G PD+ ++N+L+ +C+SGEV+
Sbjct: 328 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 387
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
VE+ + + G + +Y +I ++KAG EA LL+ +V G P Y+ I G
Sbjct: 388 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 447
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R + +DA F +++ G PN +Y +I + A + M G P
Sbjct: 448 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 507
Query: 185 SRCFDLVTDGL 195
+ ++ +GL
Sbjct: 508 ESTYTILIEGL 518
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + L++GL G +A ++++M+++ PD+ T+ L+E CK + +++
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D+ TY +++ + + G +D+A L NL G P Y ++KG
Sbjct: 216 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 275
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+++DA E+ KG PPN + LI+ R G A L ++ + G TP S
Sbjct: 276 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVS 213
++ + K D A L VS
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVS 361
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + +V G AG L++A+++V +M +PD T+N+LI +C G + +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + DV TY IL+ A K +A +LL + + G P Y ++ G +
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DDA F + G PN Y ++ R+ +A + EM + G P
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLE 211
F+++ L C K + +E LE
Sbjct: 301 FNMLISFL--CRKGLVEPALEVLE 322
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ L +G ++ A ++++++ +G P L ++N++I+ + K+G+
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + G D+ TY + + + I++A R + + G P LY
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 478
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G +R + A F+ + G PN YT LI G EA + L E+ G
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538
Query: 181 LT 182
+
Sbjct: 539 VV 540
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P V L+ L G + A +++ M+++G +P++ T+N LI +CK G
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V+ + + + + G DV TY LI +S +DEA LL +V + P++ +
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I+G G+ AF + ++ G N Y LI R + +A + EMT
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+GL P S + ++ G + D AE +
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDL 419
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+LL+ GLL + A +++++M G +PD T++ LI+ CK +V+ ++ ++
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP---SLYAPIIKGAFRRGQ 130
G ++ Y L+ A+ + GM++ A NL + N FP Y+ +I GA + G
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERA----RNLFNEMDNNFPLDVVAYSTMIHGACKAGD 481
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
A I +G P+ Y+ +I M + G A L +MT G P FD
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541
Query: 191 VTDGLKNCGK 200
+ G G+
Sbjct: 542 LIQGYSTKGE 551
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V L++GL +A ++ A +++ +M + G +P++ ++SL++ CKSG
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + G DV Y LI ++ K G +A ++ +V G P Y
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +A ++ KG P+ Y TLI EA L EM
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320
Query: 181 --LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P F+ V GL + G+ A ++ +
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI--KQGSDPDLETFNSLIETICKS 58
MS+KG P V + L++GL + ++ A ++ +M+ K P++ TFNS+I+ +C
Sbjct: 281 MSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI 340
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G + ++ + + G ++ TY +LI + + + +A L+ + G P Y
Sbjct: 341 GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ +IKG + Q D A S ++ +G P Y L+ G A N EM
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++QGL + G + A Q+ M + G +L T+N LI + + +V +E+
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ LG D TY ILI K +D A LL + + G P Y P++
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G + A F+E+ P + Y+T+I + G A L + + GLTP +
Sbjct: 445 QGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ +V + G + A +
Sbjct: 504 YSIVINMFAKSGDMEAANGV 523
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +L++ L + A ++ M G D+ T+ +LI +C + EV+ VE+
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+C+ G +V Y L+ K+G ++ ++ + E G P +Y +I +
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A + +G PN Y LI + G EA L +M+E G+ P
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 188 FDLVTDGLKNCGKHDLA 204
++ + GL + + D A
Sbjct: 293 YNTLIKGLSDVLEMDEA 309
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ + G +E A+ + N+M D+ ++++I CK+G+
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGD 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ S+ G D TY I+I +K+G ++ A +L + G P +++
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
+I+G +G+ + E+ K + + +TL T
Sbjct: 542 LIQGYSTKGEINKVLELIREMITKNIALDSKIISTLST 579
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMY-------YSVCKLGSCADVSTYKILIPAVSKAGMI 96
D ++N+++ +C+ G + + + C+ + +Y +L+ A+ +
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACR----PNAVSYTVLMRALCADRLA 131
Query: 97 DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
D+A LL ++ G Y +I+G + D A E+ G PN VY++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ + GR+ + +EM+E G+ P + + D L GK A + + V
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + ++++ L N L A ++++++ P + T+ LIE G
Sbjct: 173 MKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGG 232
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY +I + K GM++ A L+ +L G P Y
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ +G++D+ +E+ +G PN+ Y+ LI+ R GR EA + L M E
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
LTP + +D + L G+ DLA I +S
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 385
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG P V ++L++ LN G + +++V +M +G +P+ T++ LI ++C+ G
Sbjct: 278 LTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + D +Y LI A+ K G +D A ++ ++ +G P Y
Sbjct: 338 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ + G + A F++++ G PPN Y T+I+ G A + M G
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 181 LTP 183
+ P
Sbjct: 458 IDP 460
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +L++ + G + A +++ +M+ +G PD+ T+N++I +CK G VE E+
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 274
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
S+ G DV +Y IL+ A G DE +L+ + G P Y+ +I R
Sbjct: 275 ITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 334
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ D+A + K P+ Y LI+ + GR A + M G P
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 394
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + L G + A +I
Sbjct: 395 YNTILAALCKNGNANQALEI 414
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + +++G+ G +E A +++ + +G +PD+ ++N L+ G+
Sbjct: 243 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGK 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G + TY ILI ++ + G IDEA +L ++E P Y P
Sbjct: 303 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ D A + G P+ Y T++ + G +A ++ MG
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++ + L +CG A
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRA 446
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG+ P V L++G N +E A + V ++++ ++PD+ +N++I CK +
Sbjct: 104 LVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESHTEPDVFAYNAVISGFCKVNQ 162
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + G D+ TY I+I ++ + A +L L+ D P Y
Sbjct: 163 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTI 222
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G ++A E+ +G P+ Y +I + G AA + +T G
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P ++++ N GK D EK+
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKL 309
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P D L+ L G L+ A +++ MI G PD+ +N+++ +CK+G
Sbjct: 348 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 407
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E++ + +G +VS+Y +I A+ G A ++ ++ G +P Y
Sbjct: 408 ANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNS 467
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G ++A +++ G P Y ++ + R +A EM E G
Sbjct: 468 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 527
Query: 181 LTPISRCFDLVTDGLKNCG 199
P + L+ +G+ G
Sbjct: 528 CRPNETTYILLIEGIGFAG 546
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 5/214 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +L+ L G ++ A ++ MI++ PD +++ LI +CK G
Sbjct: 313 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 372
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G D+ Y ++ A+ K G ++A + + L G P S Y
Sbjct: 373 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 432
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G A + KG P+ Y +LI+ R G EA L +M + G
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Query: 181 LTPISRCFDLVTDGLKNCGKHD-----LAEKIEQ 209
P +++V GL + D AE IE+
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK 526
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + L+ L G +E A +++ M + G P + ++N ++ +CK
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
++ + M+ + + G + +TY +LI + AG EA L ++L
Sbjct: 513 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MSDKG P V ++L+ GL G L+ A ++ +M + G P + T+N+L+ CK G
Sbjct: 975 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034
Query: 61 VEFCVEMY-YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+ +E+ Y +CK G ADV TY + I + +A+ LL + ++ +P Y
Sbjct: 1035 YKAAIELIDYMICK-GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 1093
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G+ A F+E+ PN Y LI G F EA L M
Sbjct: 1094 TLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 1153
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEK-IEQLEVS 213
GL + + +GL K +LA++ +E++ V+
Sbjct: 1154 GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVN 1188
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP V L+ G G ++SAK+++ +M + G + +++LI C+ G
Sbjct: 1220 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 1279
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++Y + G AD T +L+ ++ + G + EA + L ++ G P Y
Sbjct: 1280 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 1339
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL 173
II G G +AF FF ++ G P+ Y +L+ +GG VEA +L
Sbjct: 1340 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 1392
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P D ++ G + G +A + MIK G P T+ SL++ +CK G
Sbjct: 1325 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 1384
Query: 61 V----EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
+ +F ++Y + D Y L+ K+G + EA L +V++ P
Sbjct: 1385 LVEAKKFLNRLHY----IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP-PNRPVYTTLITMCGRGGRFVEAANYLME 175
Y+ ++ G R+G+ A C F +G PN +YT L+ + G A + E
Sbjct: 1441 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 1500
Query: 176 MTEMGLTPISRCFDLVTDGLKNCGK 200
M + G P + F+ + D G+
Sbjct: 1501 MMKKGTCPDTVAFNAIIDSCSRRGQ 1525
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSC-ADVS 81
+G L A + +KM++ PD T++SL+ +C+ G+ V ++ + G+ +
Sbjct: 1417 SGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 1476
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
Y L+ +SKAG AF +++ G P + II RRGQ A FFS +
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
+ G PN Y L+ + + + M G+ P F + GL G
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596
Query: 202 DLAEKI 207
DL K+
Sbjct: 1597 DLGVKL 1602
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ G L + + M+++G PD TF+SLI + KSG
Sbjct: 1536 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 1595
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V++ + G+ AD T+ ILI S++G + +AF L++ + G P Y
Sbjct: 1596 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 1655
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G ++ F ++ E+ G P Y TLI R G A EM +G
Sbjct: 1656 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 1715
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ GL +CGK
Sbjct: 1716 FGSHEVAESAMVRGLLHCGK 1735
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL E AK+++ +M + LI+ +CK+G ++ V++ ++ K G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + G I A ++ + G +Y+ +I + G +A
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ + GH + L++ R G+ EA +L M+ +GL P S +D + +G
Sbjct: 1285 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344
Query: 196 KNCG 199
+ G
Sbjct: 1345 GSIG 1348
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 87/180 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV GL AG+ ++A +M+K+G+ PD FN++I++ + G++ + + ++ G
Sbjct: 1481 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 1540
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
C +++TY IL+ SK + L ++ +G P + +I G + G D
Sbjct: 1541 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 1600
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ ++G ++ + LI G+ +A + + M +G+ P ++ + +GL
Sbjct: 1601 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ GL +G + +++ KMI +G+ D TFN LI +SG+
Sbjct: 1571 MMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGK 1630
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + LG D TY + ++K E+ +LH ++E+G P + Y
Sbjct: 1631 MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYIT 1690
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G AF E++ G + + ++ G+ +A L M M
Sbjct: 1691 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 1750
Query: 181 LTPISRCF 188
L P F
Sbjct: 1751 LLPTIATF 1758
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V ++ + L A ++ KM K+ P+ T+N+LI K G++
Sbjct: 1048 KGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 1107
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + K + TY LI G +EA RLL ++ G Y ++
Sbjct: 1108 AAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLN 1167
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + +F+ A +++ YT LI + G EA + M + G+ P
Sbjct: 1168 GLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNP 1227
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ + +G G A++I
Sbjct: 1228 DVITYSSLINGFCRVGNIKSAKEI 1251
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
DLL++ L G ++ A + + G P + T N ++ ++ K E ++ +
Sbjct: 918 DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSD 977
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G C +V T+ ILI + G + +A LL + E+G P Y ++ ++G++
Sbjct: 978 KGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKA 1037
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + KG + Y I R +A L +M + ++P ++ + +
Sbjct: 1038 AIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLIN 1097
Query: 194 GLKNCGKHDLAEKI 207
G GK +A ++
Sbjct: 1098 GFVKEGKIGVAAQV 1111
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ G + A + M G P+L T+N L+ K
Sbjct: 1501 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 1560
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y ++ + G D T+ LI +SK+G+ D +LL ++ +G +
Sbjct: 1561 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 1620
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ AF + + G P+R Y + + F E+ L EM E G
Sbjct: 1621 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 1680
Query: 181 LTPISRCFDLVTDGLKNCG 199
+ P + + +G+ G
Sbjct: 1681 VIPKHAQYITLINGMCRVG 1699
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 2/198 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ +G + A +VN M G PD +T+N + + K + + + +
Sbjct: 1619 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 1678
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + Y LI + + G I AF+L + G + +++G G+ +D
Sbjct: 1679 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 1738
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + P +TTL+ R + EA M GL ++++
Sbjct: 1739 AMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIM 1798
Query: 194 GLKNCGKHDLAEKIEQLE 211
G+ C D A E E
Sbjct: 1799 GM--CANGDSAAAFELYE 1814
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 35/145 (24%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF +V+GLL+ G E A +++ M++ P + TF +L+ C+ +
Sbjct: 1711 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1770
Query: 61 VEFCVEM--------------YYSVCKLGSCA---------------------DVSTYKI 85
+ +++ Y+V +G CA +++TY +
Sbjct: 1771 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1830
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDG 110
L+ A+S A + + +LL +L E G
Sbjct: 1831 LVDAISAANNLIQGEKLLTDLQERG 1855
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 2/159 (1%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
F+ LI K G +++ VE + V +G V T +++ ++ K + + L +
Sbjct: 916 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
+ G P + +I G G A +++ G P Y TL+ + GR+
Sbjct: 976 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
A + M G+ +++ D L C H A+
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNL--CTNHRSAK 1072
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 5/219 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ GL + G L+ A + +KM G P++ T+N+LI CK
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ EM + K G +V T+ LI A KAG +D+AF L +++ G P S Y
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM- 179
+I G R G +A E++ G + Y L+ + G +A L EMT M
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLME 504
Query: 180 --GLTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSL 214
G ++++ G N GK + A ++ E LE L
Sbjct: 505 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 543
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K +P ++L+ G + +AK++ +M +QG P++ T+NSLI +C +G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + +G +V TY LI K M+ EA +L ++ + G P +
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DDAF S + G PN Y LI R G EA EM G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
L ++++ D L C K + + + L+
Sbjct: 470 LKADLVTYNILVDAL--CKKGETRKAVRLLD 498
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF+P V + ++ G AG + A ++ +M+ + P+ TFN LI+ C+
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +++ + + G +V TY LI + G +DEA L + G P Y
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ +A +I +G PN + TLI G+ GR +A M + G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P ++ + G G A K+ +
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V + L+ AG ++ A + + M+ G P++ T+N LI C+ G V+
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV---EDGHNPFPSLYAP 120
++ + G AD+ TY IL+ A+ K G +A RLL + + G Y
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNV 517
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
+IKG +G+ ++A +E+ KG PNR Y L
Sbjct: 518 LIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V + L+ G G ++ A+++ +M G DL T+N L++ +CK GE
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489
Query: 61 VEFCVEMYYSVC---KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
V + + K G A++ TY +LI G ++EA RLL+ ++E G P +
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549
Query: 118 Y 118
Y
Sbjct: 550 Y 550
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF + ++ L+ G + + + +MI++ ++ TF+ +I +CK G+ +
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++ + G V TY +I KAG + +A LL +V +P + +I
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G R A F E++ +G PN Y +LI G+ EA +M+ MGL
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
P ++ + +G C K L E E L+
Sbjct: 367 PNVVTYNALINGF--CKKKMLKEAREMLD 393
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D+LV + G ++ A + ++ G + N ++ ++ K G + +Y + +
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+V T+ ++I + K G +A ++ ++ G +P Y II G + G+
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A E+ K PN + LI R A EM GL P ++ + +
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342
Query: 194 GLKNCGKHDLA 204
GL + GK D A
Sbjct: 343 GLCSNGKLDEA 353
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M KG + ++L++G N G LE A +++N+M+++G P+ T++ L + + + G
Sbjct: 503 MEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI---KQGSDPDLETFNSLIETICK 57
M G + ++LV L G A +++++M K+G ++ T+N LI+ C
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCN 524
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
G++E + + + G + +TY IL + + G I + L+N+
Sbjct: 525 KGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNV 573
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +R +L+ G L A + N+MI +G PD+ N ++E + +S + +
Sbjct: 228 FTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAI 287
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+++ + G DV +Y ILI + + ++EA +++ G P ++Y +I G
Sbjct: 288 KLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGF 347
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
R + D + E+K +G PP+ Y LI + R +AA +MT+ G+ P
Sbjct: 348 GNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTI 407
Query: 186 RCFDLV 191
++++
Sbjct: 408 HTYNMI 413
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 35/244 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKGF P + +++++GLL + A ++ M +G PD+ ++ LI +C+ +
Sbjct: 258 MIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSK 317
Query: 61 VEFCVEMYYSVCKLGSCADVS-----------------------------------TYKI 85
+E VE + + G D + TY
Sbjct: 318 MEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNA 377
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI +++ M D+A R+ + + G P Y I+K F+ ++ + E+ KG
Sbjct: 378 LIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKG 437
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ YT LI GR EA YL EM E G+ ++ L G D+ E
Sbjct: 438 FCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADLSRGGNPDILE 497
Query: 206 KIEQ 209
++ Q
Sbjct: 498 ELAQ 501
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 78/234 (33%), Gaps = 68/234 (29%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMY-------------YSVC------------ 72
KQG + D T+NS++ + K+ + E V M +S+
Sbjct: 122 KQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFAAAKERKK 181
Query: 73 ---------KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL----------------- 106
K V T L+ ++ +A + EA L NL
Sbjct: 182 AVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTYTVLLNG 241
Query: 107 -----------------VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
++ G P + +++G R Q DA F +K KG P+
Sbjct: 242 WCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPD 301
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
YT LI R + EA Y EM + G P + + + G N + D+
Sbjct: 302 VRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDM 355
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P ++L+ L G + A+ ++ M K+G PD+ T+N+L+E C
Sbjct: 256 MVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + K G DV Y +LI K M+DEA L L P + Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ E+ PP+ Y LI + GR +EA L+ M + G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 181 LTPISRCFDLVTDG 194
+ P ++ + DG
Sbjct: 436 VKPNIVTYNAMMDG 449
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG +P + +L+ + + A ++ ++K G P+L TFN++I C +G
Sbjct: 81 LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ G D TY LI +SK G I A LL + + P +Y+
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DA S+I +G + Y +LI C GR+ E L +M
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+++ D L G+
Sbjct: 261 VDPDDYTFNILIDALCKEGR 280
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 5/211 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ G ++ A + +M + PD+ ++NSLI+ +C G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA- 119
+ E+ +C G DV TY IL+ A K D+A L +VE +P Y
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE---GIWPDFYTN 582
Query: 120 -PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ + + A + + G PN YT LI + G F EA L +M +
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMED 642
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + F+++ L + D AEK+ +
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKAEKLRE 673
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +K P + + L+ GL N+G + K+++++M PD+ T+N LI+ +CK G
Sbjct: 361 LCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGR 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + K G ++ TY ++ ++ A + + +V+ G P Y
Sbjct: 421 ILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNV 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F E++ K P+ Y +LI GR L EM + G
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 181 LTPISRCFDLVTDGL 195
+P ++++ D
Sbjct: 541 QSPDVITYNILLDAF 555
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++L+ G ++ A + ++ + P + ++NSLI+ +C SG
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + DV TY ILI A+ K G I EA +L +++ G P Y
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + A F+ + G P+ Y LI + EA EM
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ + DGL N G+
Sbjct: 506 LIPDIASYNSLIDGLCNLGR 525
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + + L+ GL N G + ++++++M G PD+ T+N L++ CK+
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + G D T ++ + K + A L +L+ G +P Y
Sbjct: 561 FDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G F +A S+++ PP+ + +I + + +A EM G
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Query: 181 LTPISR 186
L I +
Sbjct: 680 LVNIEK 685
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + L+ GL G++ A + +++ ++G D T+NSLI+ C G
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + D T+ ILI A+ K G I EA +L + + G P Y
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R +A F+ + +G P+ Y LI + EA E+
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + DGL N G+ +K+
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKL 392
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +++A ++ +M K P+L +++LI+ +CK G V + + + + G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI G E +LL +V + +P + +I + G+ +A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ + +G P+ Y L+ C R EA M + GL P ++++ DG
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVH-EARELFNRMVKRGLEPDVLNYNVLIDG 344
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 1/198 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ L G + A ++ M+K+G P++ T+N++++ C V ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K G D+ Y +LI K M+DEA L + P + Y +I G
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ E+ G P+ Y L+ + F +A + ++ E G+ P
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581
Query: 188 FDLVTDGLKNCGKHDLAE 205
+ D L K +AE
Sbjct: 582 NHAIVDNLCKGEKLKMAE 599
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A N+M++ P F+ L+ I + G + ++ + G ++T+ I
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI AF LL +++ G+ P + II G G A F + +G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ Y TLI + G+ A + L EM + + P + + DGL
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGL 205
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G B AF + + + YT LI+ + GR V+A L M +G
Sbjct: 323 LIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVG 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 383 LKPDAXTYTMIINEF--CKKGDVWK 405
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + ++++ G L FN L+ CK G++
Sbjct: 103 FXXPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAX 162
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V +Y L+ + G +DE FRL + G P Y+ +I G
Sbjct: 163 SVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGL 222
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ +KG PN +TTLI + GR A +M L P
Sbjct: 223 CKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDL 282
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 283 ITYNXLIYGL--CKKGDLKQ 300
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNX 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M E
Sbjct: 288 LIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ + + GL G+ AEK+ + +S+
Sbjct: 348 IRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSV 381
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N LI +CK G+++
Sbjct: 241 KGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +B AF ++E+ Y +I
Sbjct: 301 ANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA + G P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A + + + K G P + ++N+L+ + G+++ + ++
Sbjct: 146 NILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXA 205
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++ G P + +I G + G+ D
Sbjct: 206 SGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDL 265
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y LI + G +A + + EM+ GL P + + D
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLID 325
Query: 194 GLKNCGKHDLA--EKIEQLEVSLR 215
G G B A + +E ++R
Sbjct: 326 GCCKEGNLBTAFEHRXRMIEENIR 349
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++ +M +G PD T+ +LI+ CK G
Sbjct: 273 MLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGN 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ G P Y
Sbjct: 333 LBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 XVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
>gi|11079485|gb|AAG29197.1|AC078898_7 hypothetical protein [Arabidopsis thaliana]
Length = 441
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + + LV G GY+ AKQ V +I+ G DPD T+ S I C+ EV+ +
Sbjct: 152 SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFK 211
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + + G + +Y LI + +A IDEA LL + +D P Y +I
Sbjct: 212 VFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC 271
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
GQ +A F ++ G P+ +YT LI G EA+ L M E GL P
Sbjct: 272 GSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G +E K++ +M++ PD+ TFN+L+ CK G V + + + G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY I + +D AF++ + ++G + Y +I G F + D+A
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 136 CFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTP 183
++K PN YT LI +CG G + EA N +M+E G+ P
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQK-SEAMNLFKQMSESGIKP 293
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+N+L+ ++ + G VE +Y + + D+ T+ L+ K G + EA + + L+
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
+ G +P Y I G RR + D AF F E+ G N YT LI +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
EA + L++M + P R + ++ D L CG +E +
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDAL--CGSGQKSEAM 280
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL A ++ A ++ KM P++ T+ LI+ +C SG+ + ++ + + G
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG 290
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y +LI + +DEA LL +++E+G P Y +IKG F + A
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG-FCKKNVHKAM 349
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVE 168
S++ + P+ Y TLI C G E
Sbjct: 350 GLLSKMLEQNLVPDLITYNTLIAGQCSSGISLSE 383
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P +L+Q + L+ A ++ M++ G P++ T+N+LI+ CK
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN- 344
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
V + + + + D+ TY LI +G+
Sbjct: 345 VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGI 379
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G++E A ++VN+M++ G P+L TFN+L++ I K E +E+ + +
Sbjct: 503 NVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS 562
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY ++ +S+ +EA ++LH + + G P +Y I+ +R + D
Sbjct: 563 KGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQ 622
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
A FF+ + G PN Y LI G EA L E+ G+
Sbjct: 623 AIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S GF P + +++GL A + K + +M+ + P+ TF+ L+ C+ G
Sbjct: 248 LSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGM 307
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +++ + + G + + I+I A+ K G +D+A+ L+N+ G NP Y
Sbjct: 308 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 367
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+++ A E+ K PPN + T I + + G +A + M E G
Sbjct: 368 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 427
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ ++ + G G+ D A
Sbjct: 428 CSVGIVTYNALVHGFCVQGRVDSA 451
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G NP +++GL AG E AK+++ +M+++ P+ TFN+ I +C+ G +E
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 416
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + G + TY L+ G +D A L +NL + P Y ++ G
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTG 473
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ D A +E+ K P N + L++ + G EA + +M E G TP
Sbjct: 474 LCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPN 533
Query: 185 SRCFDLVTDGL-KNCGKHDLAEKIEQL 210
F+ + DG+ K+C + E + L
Sbjct: 534 LITFNTLLDGITKDCNSEEALELLHGL 560
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%)
Query: 28 SAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
+ + + M+++G P + T+ L+E +CKS + + + G ++ TY ++I
Sbjct: 170 ATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVII 229
Query: 88 PAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+ + G +D+A +L+ L G P Y ++KG ++DD F+E+ K
Sbjct: 230 NGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV 289
Query: 148 PNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN + L+ RGG A L +M++ G TP + ++V + + G+ D A
Sbjct: 290 PNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA 346
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V +L++ + + A ++++M +G P++ T+N +I +C+ G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 61 VEFCVEMY--------------YSVCKLGSCA-----DVS----------------TYKI 85
V+ E+ Y+ G CA DV T+ +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ + GM++ A ++L + + G P +L +I ++G+ DDA+ F + + + G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
P+ YTT++ R GR+ A L EM P F+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 401
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P ++++ + G ++ A +N M G +PD ++ +++ +C++G
Sbjct: 318 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 377
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ + + + T+ I + + G+I++A +L+ + E G + Y
Sbjct: 378 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNA 437
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G +G+ D A F+ + + PN YTTL+T R AA L EM +
Sbjct: 438 LVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQ 492
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL +A L++A +++ +MI++ + TFN L+ C+ G VE +E+ + + G
Sbjct: 470 LLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 529
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ T+ L+ ++K +EA LLH LV G + Y+ ++ R + ++A
Sbjct: 530 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 589
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ G P +Y ++ + +A ++ M G P + ++ +GL
Sbjct: 590 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649
Query: 196 KNCG 199
+ G
Sbjct: 650 AHEG 653
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G+ E A ++++ ++ +G D T++S+++ + +
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 584
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++M ++V +G V Y ++ A+ K D+A +V +G P S Y
Sbjct: 585 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYII 644
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G G +A SE+ KG
Sbjct: 645 LIEGLAHEGLLKEARYVLSELYAKG 669
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ A +++N+M+ G P + T+NSLI + G ++ +E+ + + G+ DV TY L
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
+ +AG ++ A + + G P + IK RG+F + F EI + G
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P+ + TL+ + G+ G E + EM G P F+ + CG + A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+P + + L+ G L+ A ++ N+M ++G+ PD+ T+ +L+ ++G+VE
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + G ++ T+ I G E ++ + G +P + ++
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G + F E+K G P R + TLI+ R G F +A M + G+TP
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
++ V L G + +EK+
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKV 546
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ + A Q+ +M G D T+N+L++ KS
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + TY LI A ++ GM+DEA L + + E G P Y
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G+ + A F E++ G PN + I M G G+F E E+ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 181 LTPISRCFDLVT 192
L+P D+VT
Sbjct: 450 LSP-----DIVT 456
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 6/222 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P V L+ G AG +ESA + +M G P++ TFN+ I+ G+
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++++ + G D+ T+ L+ + GM E + + G P +
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G F+ A + + G P+ Y T++ RGG + ++ L EM +
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 181 LTPISRCFDLVTDGLKNCGK-----HDLAEKIEQLEVSLRSV 217
P + + N GK H LAE++ + R+V
Sbjct: 555 CKPNELTYCSLLHAYAN-GKEIGLMHSLAEEVYSGVIEPRAV 595
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEV-EFCVEMYYSVCKLGSCADVSTYKILIPAV 90
+V KM G PD T+N+LI T CK G + + +++ + G D TY L+
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
K+ EA ++L+ +V +G +P Y +I R G D+A +++ KG P+
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
YTTL++ R G+ A + EM G P F+ N GK KI
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P + + L+ G + +M + G P+ ETFN+LI + G E
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIK 123
+ +Y + G D+STY ++ A+++ GM +++ ++L + EDG P Y ++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLH 567
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ E+ P + TL+ +C + EA E+ E G +P
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ L G + SA M N + + G D+ ++ SLI SG V ++ + +
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 75 GSCADVSTYKILIPAVSKAGM-IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + TY +++ K G ++ L+ + DG P Y +I R +
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A F E+K G ++ Y L+ + G+ R EA L EM G +P
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF P + + L+ + +++++ +++ +G PD+ ++N++I C++
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G DV TY I + + M +EA ++ +++ G P + Y
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 121 IIKGAFRRGQFDDAFCFFSEIK-IKGHPP 148
I+ G + + D+A F +++ + H P
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A++ +++ ++G PD+ T NS++ + V + + + G ++TY
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ S++ ++ +L ++ G P Y +I R + DA FSE++ G
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y T I F EA + M + G P ++ + DG + D A+
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P LV L G + A Q+V+KM + G + T+NSL+ +C G
Sbjct: 123 MIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGN 182
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G + TY L+ A K DEA +LL ++ G P Y
Sbjct: 183 LTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNV 242
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +DA F E+ KG PN Y L+ GR+ EA L EM
Sbjct: 243 LLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDE 302
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+P + ++++ L G+ + A +E LE +R+
Sbjct: 303 RSPSTVTYNILIGSLTLHGRTEHA--LEVLEEMIRA 336
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V L+ L + A +++ MI G PD ++ L+ ++C+ G
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + +++ + + G + +TY L+ + G + ++ +LL L++ G P Y+
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ A++ D+A EI KG PN Y L+T + GR +A E+ G
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG 267
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P ++++ L N G+ + A
Sbjct: 268 FSPNVVSYNILLRSLCNEGRWEEA 291
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KGF+P V ++L++ L N G E A ++ +M P T+N LI ++ G
Sbjct: 263 LPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGR 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + + S+Y +I + K +D + L ++ NP Y
Sbjct: 323 TEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G +AF + K H + Y +IT R G A L EMT+ G
Sbjct: 383 -IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYG 441
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
TP S + + GL C + L E IE V
Sbjct: 442 FTPDSFTYSSLIRGL--CMEGMLNEAIEIFSV 471
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ + LV+GL G L + Q+++++I++G P+ T++ L+E K
Sbjct: 158 MEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERG 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G ++ +Y +L+ + K G ++A +L L G +P Y
Sbjct: 218 ADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNI 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ G++++A +E+ P+ Y LI GR A L EM
Sbjct: 278 LLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRAR 337
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
P + ++ + L K DL K
Sbjct: 338 FKPTASSYNPIIARLCKDRKVDLVVK 363
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 9/176 (5%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV- 65
+P ++L+ L G E A +++ +MI+ P ++N +I +CK +V+ V
Sbjct: 304 SPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVK 363
Query: 66 ---EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+M Y C + TY I + + GM+ EAF ++ +L H Y +I
Sbjct: 364 CLDQMMYRHCN----PNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVI 418
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
R+G AF E+ G P+ Y++LI G EA M E
Sbjct: 419 TSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE 474
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
P G + L G ++ A ++ + + E + +I ++C+ G ++
Sbjct: 375 PNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLL 434
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
Y + K G D TY LI + GM++EA + +++E+ Y +I G +
Sbjct: 435 YEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF-SVMEENIKLDTENYNSLILGCCKS 493
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+ D A F + KG+ N YT L+
Sbjct: 494 RRTDLALDVFEIMVGKGYLANETTYTILV 522
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF P L++GL G L A ++ + M ++ D E +NSLI CKS
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRR 495
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ ++++ + G A+ +TY IL+ + +D A +L L
Sbjct: 496 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 541
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D F PV ++L+ GL G L A ++V+ M +G P+ T+N+LI +C G++E
Sbjct: 263 DGCFPSPVT-FNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLE 321
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + +V TY +I + K G + +L + E G+ +Y+ +I
Sbjct: 322 KAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLI 381
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G F+ G+ +A F E+ +KG+ N VY+ +I R G+ +A L EMT G T
Sbjct: 382 SGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCT 441
Query: 183 P 183
P
Sbjct: 442 P 442
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ + P V L+ GL A ++ A ++++M G P TFN LI +CK G+
Sbjct: 225 MTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGD 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ G + TY LI + G +++A LL +V P Y
Sbjct: 285 LSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G ++G+ D C + ++ +G+ N VY+TLI+ + G+ EA + EMT G
Sbjct: 345 IINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKG 404
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + V DGL GK D A ++
Sbjct: 405 YELNTIVYSAVIDGLCRDGKPDDAVEV 431
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + L+ GL G LE A ++++M+ P++ T+ ++I + K G
Sbjct: 298 KGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALD 357
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G C + Y LI + K G EA L + G+ +Y+ +I
Sbjct: 358 GACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVID 417
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G+ DDA SE+ KG PN ++L+ G A +M + T
Sbjct: 418 GLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQ 477
Query: 184 ISRCFDLVTDGLKNCGK 200
C+ ++ GL GK
Sbjct: 478 NEVCYSVLIHGLCKDGK 494
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 20 LLNAGYLESAKQMVNKMIKQGS---DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
++ G A + N +I P++ TFN +I+ +CK G V+ ++++ +
Sbjct: 171 IIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKC 230
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
DV TY L+ + KA IDEA LL + DG P P + +I G ++G A
Sbjct: 231 EPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAK 290
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
+ +KG PN Y TLI G+ +A + L M P + + +GL
Sbjct: 291 LVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLV 350
Query: 197 NCGK 200
G+
Sbjct: 351 KQGR 354
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA---DVSTYKILIPAVSKAGMIDEAFRL 102
++FNS++ I + G +E Y V + +V T+ ++I A+ K G++D+A ++
Sbjct: 162 KSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQV 221
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
++ P Y ++ G + + D+A E++I G P+ + LI +
Sbjct: 222 FRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCK 281
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G AA + M G P ++ + GL C K L + I L+
Sbjct: 282 KGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGL--CLKGKLEKAISLLD 328
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++KG P L++G AG A ++ M K + ++ LI +CK G+
Sbjct: 435 MTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGK 494
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V+ + ++ + G DV Y +I +S AG++++A +L + ++ G + P + Y
Sbjct: 495 VKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTY 554
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
++ ++ A + + +G P+ T + M
Sbjct: 555 NILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRM 595
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 77/180 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G+ L+ GL G + A + +M +G + + ++++I+ +C+ G+
Sbjct: 365 MEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGK 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE+ + G + T L+ +AG A + ++ + Y+
Sbjct: 425 PDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSV 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +A ++++ KG P+ Y+++I G +A EM G
Sbjct: 485 LIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQG 544
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ ++GL G LE A +V +M + PD+ T+N+L+ +CK +V+ + +
Sbjct: 250 NIWIRGLCEDGRLEEAVALVERMGAYVA-PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN 308
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D TY +I K+GM+ EA LL + V G P Y +I G G +
Sbjct: 309 QGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIER 368
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F+E + K P+ VY +L+ R G + A + EM E G P ++++ +
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428
Query: 194 GLKNCG 199
GL G
Sbjct: 429 GLCKMG 434
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV-E 62
K P + + LV+GL G + A Q++N+M+++G PD+ T+N +I +CK G + +
Sbjct: 379 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V M ++ K G DV T+ LI K +D A +L+ + G P Y ++
Sbjct: 439 AAVVMNDAIVK-GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G+ + F E+ +KG PN Y LI + + EA+ ++ M + GL
Sbjct: 498 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557
Query: 183 PISRCFDLVTDGLKNCGKHD 202
P + F+ + G G D
Sbjct: 558 PDAVSFNTLIHGFCRNGDLD 577
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG+ P V + L+ G L+SA Q+V +M G PD+ T+NS++ +CK+G+ +
Sbjct: 449 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE 508
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E + + G + TY ILI K ++EA ++ + +DG P + +I
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIH 568
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G D A+ F ++ KG+ + LI A EM G P
Sbjct: 569 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 628
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ ++ DGL D A
Sbjct: 629 DLYTYRILVDGLCKAANVDRA 649
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + ++ G +G L+ A +++ + +G PD T+ SLI +C G+
Sbjct: 306 MMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGD 365
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ D+ Y L+ + + G+I A ++++ +VE+G +P Y
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNI 425
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + G DA ++ +KG+ P+ + TLI + + A + M G
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485
Query: 181 LTPISRCFDLVTDGLKNCGK-HDLAEKIEQL 210
+ P ++ V +GL GK ++ E E++
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEM 516
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P ++L++ LE A ++ +M + G PD +FN+LI C++G+++
Sbjct: 519 KGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDG 578
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G A T+ ILI A S + A ++ ++ G+ P Y ++
Sbjct: 579 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVD 638
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + D A+ +E+ KG P+ + ++ + R EA + M MG+ P
Sbjct: 639 GLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P L+ GL G +E A ++ N+ + PDL +NSL++ +C+ G +
Sbjct: 344 KGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 403
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G D+ TY I+I + K G I +A ++++ + G+ P + +I
Sbjct: 404 ALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLID 463
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G +R + D A + G P+ Y +++ + G+ E EM G P
Sbjct: 464 GYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 523
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ ++++ + C KI QLE
Sbjct: 524 NAITYNILIENF--C-------KINQLE 542
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ GL AG + + +MI +G P+ T+N LIE CK +
Sbjct: 481 MWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + +C+ G D ++ LI + G +D A+ L L E G++ +
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + A F E+ KG+ P+ Y L+ + A +L EM G
Sbjct: 601 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKG 660
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
P F + + L H ++E + + + +R
Sbjct: 661 FVPSMATFGRMLNLLAM--NHRVSEAVAIIHIMVR 693
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S++G + +V+GL G+ +A+ + ++M+ + PD+ TFN+++ +C+ G+
Sbjct: 167 LSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGD 226
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V + V K G A+ T I I + + G ++EA L+ + G P + Y
Sbjct: 227 VMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM---GAYVAPDVVTY 283
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+++G + + +A + + +G P+ Y T+I + G EA L +
Sbjct: 284 NTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVF 343
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIE 208
G P + + +GL C + D+ +E
Sbjct: 344 KGFVPDRVTYCSLINGL--CAEGDIERALE 371
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
+Q AG L +A +M P +N++++ + + + ++Y + G
Sbjct: 78 IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137
Query: 77 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFC 136
D T+ + + + G A RLL +L E G + P+ Y +++G + G +A
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197
Query: 137 FFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLK 196
F E+ + P+ + ++ + G +E+ L ++ + G++ ++ GL
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGL- 256
Query: 197 NCGKHDLAEKIEQLE 211
C L E + +E
Sbjct: 257 -CEDGRLEEAVALVE 270
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 38/239 (15%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++ L+NA Y + A ++ +M+ G PD T +++ C +G + +
Sbjct: 104 PAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRL 163
Query: 68 YYSVCKLGSCA-----------------------------------DVSTYKILIPAVSK 92
S+ + G A DV+T+ ++ A+ +
Sbjct: 164 LRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQ 223
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
G + E+ LL +++ G + I+G G+ ++A + P+
Sbjct: 224 KGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYV-APDVVT 282
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
Y TL+ + + EAA YL M G P ++ + DG C L E E L+
Sbjct: 283 YNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY--CKSGMLQEATELLK 339
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/113 (20%), Positives = 56/113 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +KG++ ++L+ + ++ A+++ +MI +G PDL T+ L++ +CK+
Sbjct: 586 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAAN 645
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V+ + G ++T+ ++ ++ + EA ++H +V G P
Sbjct: 646 VDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 90/188 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ G E A ++++ + +QG DP++ T+N++I SG+
Sbjct: 256 MLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQ 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + G+ +TY LI A K G +D A ++ ++V G Y+
Sbjct: 316 AQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSS 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+++ A F E+ +G PN Y +LI C +G ++ +A +M G
Sbjct: 376 LISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRG 435
Query: 181 LTPISRCF 188
P + F
Sbjct: 436 CKPDAVTF 443
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V L+ + L+ A + +M+ +G P+L T+N+LI+ K+G
Sbjct: 221 MRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGA 280
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + ++ + G ++ TY +I A + +G EA R+ ++ G P + Y
Sbjct: 281 WEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTA 340
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + GQ D A F ++ +G N Y++LI+ C + GR+ A EM G
Sbjct: 341 LISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEG 400
Query: 181 LTP 183
P
Sbjct: 401 CRP 403
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 89/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +G +P +R + ++ +G + A ++ +M+ G+ P T+ +LI K+G+
Sbjct: 291 LERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQ 350
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + + G +V TY LI A KAG + A L + +G P Y
Sbjct: 351 LDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNS 410
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + Q++ A F +++ +G P+ + LI R G + A +M
Sbjct: 411 LIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHN 470
Query: 181 LTPISRCFDLVTDGLKNCG 199
P S ++ + L G
Sbjct: 471 CRPDSVVYNTIVGALWKTG 489
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A ++V +M +G ++ T+++L+ K E++ +++Y + G ++ TY
Sbjct: 211 LRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNT 270
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI K G +EA R+L L G +P Y +I GQ +A + + G
Sbjct: 271 LIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAG 330
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P YT LI+ G+ G+ A +M G + + + G+ +LA
Sbjct: 331 AQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELA 389
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 6/170 (3%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV------STYKILIPAVSKAGMID 97
D +L++ + KSG V E++ + L D+ TY +I +
Sbjct: 153 DSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLR 212
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
A L+ + G Y+ ++ + + D A + ++ +G PN Y TLI
Sbjct: 213 RALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLI 272
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ G+ G + EA L + G+ P R ++ V G+ A +I
Sbjct: 273 DVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRI 322
>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Vitis vinifera]
Length = 580
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V ++L+ G + SA + +M K+G PD+ T+N+LI CK G
Sbjct: 300 MLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGN 359
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K+G+ D+ +YK++I + G + A + L ++E+ P P ++
Sbjct: 360 LDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNV 419
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G +A ++ G PPN Y LI +GG V+A + EM G
Sbjct: 420 VIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNG 479
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++L+ N G+ A ++
Sbjct: 480 IYPDVVTYNLLIGAACNFGRIHFALRL 506
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 3/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + LV GL AG LE A +V +M++ G P+ TFN+ I+ C +
Sbjct: 157 MIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNN 216
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED--GHNPFPSLY 118
V+ + ++ ++ G + TY ILI A+ K G++ +A +LL +++D G +
Sbjct: 217 VDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIIT 276
Query: 119 API-IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+ I + G ++G A + E+ +G + Y LI A Y EM
Sbjct: 277 STIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMF 336
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ GL P ++ + G G D A
Sbjct: 337 KRGLLPDIFTYNTLISGFCKIGNLDEA 363
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L G L +A + NKMI++G PD+ T N L+ +CK+G++E + + ++G
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ +T+ I +D+A L + G P Y +I ++G DA
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256
Query: 136 CFFSEI-KIKGHPPNRPVYTTLITM--CGRGGRFVEAANYLMEMTEMG 180
+I + T+ I M C + G V+A + EM + G
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRG 304
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P + +++QGL G + A Q + M++ P+ +N +I+ + G+
Sbjct: 370 MSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGD 429
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + G +V TY LI A K G I +A + ++ +G P Y
Sbjct: 430 LSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNL 489
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I A G+ A + E+ +G+ P+ YT LI C R G +EA L ++
Sbjct: 490 LIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIR-GHVMEAEELLAKLQRS 548
Query: 180 GLT 182
GL+
Sbjct: 549 GLS 551
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG---SDPDLETFNSLIETICK 57
M++ G P ++L+ L G L+ A++++ K++ D+ T ++ K
Sbjct: 227 MANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLK 286
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL 117
G++ + + + + G+ DV Y +LI ++ A+R + + G P
Sbjct: 287 KGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFT 346
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIK-GHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y +I G + G D+A C+ + K G P+ Y +I G + A +L+ M
Sbjct: 347 YNTLISGFCKIGNLDEA-CYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCM 405
Query: 177 TEMGLTPISRCFDLVTDG 194
E + P +++V DG
Sbjct: 406 LENLMVPEPLIWNVVIDG 423
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 50 SLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
++I +C G++ + + + + G DV T+ L+ + KAG +++A L+ ++E
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVE 168
G +P + + IKG D A FS + G PN+ Y LI +C +G ++
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKG--LLK 253
Query: 169 AANYLME 175
A L+E
Sbjct: 254 DARKLLE 260
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
G P V +LL+ N G + A ++ ++M+++G +PD+ T+ LI C G V
Sbjct: 478 NGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVME 537
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
E+ + + G D + ++ILI + + A+ L
Sbjct: 538 AEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 576
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G+ G L+ A + +N M G P++ T N ++ ++C +G
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G V T+ ILI + + ++ A +L + + G P Y P
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + D A + + +G P+ Y TL+T + G+ A L +++ G
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P+ ++ V DGL GK + A ++
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAEL 476
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 2/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + +++ L ++G L+ A +++++ +++ PD+ T+ LIE C V +++
Sbjct: 207 PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKL 266
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G DV TY +LI + K G +DEA + L+N+ G P + I++
Sbjct: 267 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCS 326
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G++ DA +++ KG P+ + LI R A + L +M + G P S
Sbjct: 327 TGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLS 386
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEV 212
++ + G C + + IE LE+
Sbjct: 387 YNPLLHGF--CQEKKMDRAIEYLEI 409
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 34/240 (14%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P V L++G +G A +++ + G+ PD+ T+N LI CKSGE++
Sbjct: 136 QGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDK 195
Query: 64 CVE----------------MYYSVCKLGSCA----------------DVSTYKILIPAVS 91
++ + S+C G DV TY ILI A
Sbjct: 196 ALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATC 255
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+ +A +LL + + G P Y +I G + G+ D+A F + + + G PN
Sbjct: 256 NDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVI 315
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ ++ GR+++A L +M G +P F+++ + L C K L I+ LE
Sbjct: 316 THNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFL--CRKRLLGRAIDVLE 373
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G ++ A + + M+ +G PD+ T+N+L+ +CK G+
Sbjct: 375 MPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE+ + G + TY +I ++K G + A LL + G P Y+
Sbjct: 435 ADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYST 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G G+ D+A F +++ P+ Y ++ + + A ++L M E G
Sbjct: 495 LLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 554
Query: 181 LTPISRCFDLVTDGLKN 197
P + ++ +G+ +
Sbjct: 555 CKPTKATYTILIEGIAD 571
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V +++++ + + G A++++ M+++G P + TFN LI +C+ +
Sbjct: 309 GCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRA 368
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + K G + +Y L+ + +D A L +V G P Y ++
Sbjct: 369 IDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 428
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A +++ KG P Y T+I + G+ AA L EM GL P
Sbjct: 429 LCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPD 488
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + GL GK D A KI
Sbjct: 489 IITYSTLLRGLGCEGKVDEAIKI 511
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ ++ L+ G LE + + +MI QG PD+ SLI C+SG+ + +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G+ DV TY +LI K+G ID+A ++L + P Y I++ G+ +
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + P+ YT LI +A L EM + G P ++++ +
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 194 GLKNCGKHDLAEK 206
G+ G+ D A K
Sbjct: 288 GICKEGRLDEAIK 300
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ G + +E ++ +M QG D T+N+LI C++G+
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY IL+ + G I++A ++ +L + + Y
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G R + +A+C F + KG P+ Y T+I+ R G EA M E G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 181 LTPISRCFD 189
P R +D
Sbjct: 495 FMPSERIYD 503
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + L+ GL N+G A +++ M+K+ DP++ F +LI+T K G
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + + +V TY LI G + +A + +V G P Y
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +D F E+ +G + Y TLI + G+ A M + G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 LTPISRCFDLVTDGLKNCGK 200
++P ++++ D L N GK
Sbjct: 390 VSPDIVTYNILLDCLCNNGK 409
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + L+ G + A +V+ M G P++ +N++I +CK+ +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPS 116
+ +E++Y + K G AD TY LI +S +G +A RLL ++V+ +P F +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 117 L-------------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L Y +I G G DA F + KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y TLIT + R + EMT GL + ++ + G GK ++A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 206 KI 207
K+
Sbjct: 380 KV 381
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 4/197 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P V L+ + G L A+ + +MI++ P++ T+NSLI C G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M+ + G DV TY LI K+ +++ +L + G Y
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL--MEMTE 178
+I G + G+ + A F+ + G P+ Y L+ G+ +A + ++ +E
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 179 MGLTPISRCFDLVTDGL 195
M + I+ ++++ GL
Sbjct: 425 MDVDIIT--YNIIIQGL 439
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +KM G DL +F LI C+ + + + + KLG + T L+
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+ EA L+ ++ G P +Y +I G + ++A F ++ KG +
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
Y TLI+ GR+ +AA L +M + + P
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 75/182 (41%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ A + +M++ P + F ++ I K + + + +Y+ + LG D+ ++ I
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + + A LL +++ G P ++ G + +F +A + G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN +Y T+I + A M + G+ + ++ + GL N G+ A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 206 KI 207
++
Sbjct: 240 RL 241
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQ-MVNKMIKQGSDPDLETFNSLIETICKSG 59
M + G P V ++L+ G AG ++A + + G D+ T+ ++++ + K+
Sbjct: 222 MLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++E V + + G ++TY L+ + K G ++EA LL +V++G P Y
Sbjct: 282 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 341
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + +A+ F E+ ++G + YT LI + G+ +A++ MT
Sbjct: 342 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 401
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + DGL G+ A +I
Sbjct: 402 GCVPDVVTLSTMIDGLSKAGRIGAAVRI 429
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 1/196 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P L+ GL A ++ A +M+ +M K PD T+N LI+ +CKSG+
Sbjct: 152 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGD 211
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA-FRLLHNLVEDGHNPFPSLYA 119
VE + + + G DV TY ILI KAG D A L +G Y
Sbjct: 212 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYT 271
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
I+ + + ++A +I G P Y L+ + GR EA + L ++ +
Sbjct: 272 AIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331
Query: 180 GLTPISRCFDLVTDGL 195
G TP + + DGL
Sbjct: 332 GCTPDVVTYTSLIDGL 347
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V ++ GL AG + +A ++ M +G P+ +++LI +CK+ +
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +EM + K D TY +LI + K+G ++ A ++E G P Y
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236
Query: 121 IIKGAFRRGQFDDA-FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G D A E I G + YT ++ + + EA + ++T
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G TP ++ + +GL G+ L E I+ L
Sbjct: 297 GCTPTIATYNALLNGLCKMGR--LEEAIDLLR 326
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
++ G P + + L+ GL G LE A ++ K++ G PD+ T+ SLI
Sbjct: 12 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 71
Query: 53 ------------------ETIC---------KSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+T+C ++G++ +Y ++ G DV T
Sbjct: 72 SFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLST 131
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I +SKAG I A R+ ++ G P +Y+ +I G + + D A +++K
Sbjct: 132 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 191
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P+ Y LI + G A + EM E G P ++++ G G D A
Sbjct: 192 CTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 35/239 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLI-------- 52
++ G P + + L+ GL G LE A ++ K++ G PD+ T+ SLI
Sbjct: 293 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 352
Query: 53 ------------------ETIC---------KSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+T+C ++G++ +Y ++ G DV T
Sbjct: 353 SFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLST 412
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I +SKAG I A R+ ++ G P +Y+ +I G + + D A +++K
Sbjct: 413 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 472
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P+ Y LI + G A + EM E G P ++++ G G D A
Sbjct: 473 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 531
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 1/197 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V L +E A ++ K+ G P + T+N+L+ +CK G +E +++ + G
Sbjct: 273 IVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY LI + K EA++L + G Y +I+ + G+ A
Sbjct: 333 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQAS 392
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ + G P+ +T+I + GR A M GL P + + GL
Sbjct: 393 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 452
Query: 196 KNCGKHDLA-EKIEQLE 211
K D A E + Q++
Sbjct: 453 CKARKMDCALEMLAQMK 469
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P V ++ GL AG + +A ++ M +G P+ +++LI +CK+ +
Sbjct: 398 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 457
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +EM + K D TY ILI + K+G ++ A ++E G P Y
Sbjct: 458 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 517
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D A F ++ N Y LI+ + + +A+ Y M E G
Sbjct: 518 LISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+E A ++ K+ G P + T+N+L+ +CK G +E +++ + G DV TY
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + K EA++L + G Y +I+ + G+ A + + G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA- 204
P+ +T+I + GR A M GL P + + GL K D A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 205 EKIEQLE 211
E + Q++
Sbjct: 182 EMLAQMK 188
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ LL G + A + M G PD+ T +++I+ + K+G + V ++ S+ G
Sbjct: 97 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 156
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y LI + KA +D A +L + + P Y +I G + G + A
Sbjct: 157 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAAR 216
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
FF E+ G P+ Y LI+ C G + + E T G T + + D
Sbjct: 217 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDW 276
Query: 195 L 195
L
Sbjct: 277 L 277
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++E V + + G ++TY L+ + K G ++EA LL +V++G P Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + +A+ F E+ ++G + YT LI + G+ +A++ MT
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G P + DGL G+ A +I
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRI 148
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ LL G + A + M G PD+ T +++I+ + K+G + V ++ S+ G
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 437
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y LI + KA +D A +L + + P Y +I G + G + A
Sbjct: 438 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 497
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC-FDLVTDG 194
FF E+ G P+ Y LI+ + G A +M+ SRC ++VT G
Sbjct: 498 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSS------SRCSANVVTYG 551
>gi|117586707|dbj|BAF36557.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
gi|125572970|gb|EAZ14485.1| hypothetical protein OsJ_04408 [Oryza sativa Japonica Group]
Length = 564
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL N +E AK+++ +M+ G P FN +I + K+GE+E + + G
Sbjct: 370 VIHGLCNTNNVEDAKKVLMRMVNLGPAPGSAVFNFVITALSKNGEMEDAKGLMRVMENQG 429
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL----YAPIIKGAFRRGQF 131
C D+ TY +++ +K GM+DEA H L+ D P L Y +I+G + +F
Sbjct: 430 ICPDIYTYSVIMSGYAKGGMMDEA----HALLRDAKRIHPRLSRVTYHTLIRGYCKMEEF 485
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGL 181
+ A E+K G PN Y LI ++C + + A N L EM + GL
Sbjct: 486 EKALECLKEMKEDGMEPNMDEYNKLIQSLCLKALDWRTAENLLKEMEDGGL 536
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 1/163 (0%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
+ N L+ K + + +E + +LG D +Y + I A + M+D A+R+
Sbjct: 224 QVLNKLLAMFWKLEKSKAALEAFDMFSELGCAPDGDSYYLAIQAAGRKSMVDAAWRVCDG 283
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
++ G P I+ ++ + +A + K K T L++ R
Sbjct: 284 MISSGCFPDGEKVGDIVMFFCKKKKVKEAHSVYITAKEKKVQAPTSALTFLVSALARNDE 343
Query: 166 FVEAANYLMEMTE-MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ A L+E + L + + V GL N + A+K+
Sbjct: 344 TINTALELLEEYQGESLKDAGQSYAAVIHGLCNTNNVEDAKKV 386
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G L+ G A ++A+ + +M+ G P++ T+N+L++ +CK+G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + K D+ TY I+ + KAG +++ + L +L G P Y
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G ++A+ F ++K G P+ Y TLI R G +A + EM
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 181 LTPISRCFDLVTDGLKN 197
+ + LVTD L +
Sbjct: 586 FAGDASTYGLVTDMLHD 602
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P LV GL A +V +M+ +G PDL T+ ++I +CK GE
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + K ADV Y +I ++ K +D+A L + G P Y+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G++ DA S++ + PN + +LI + G+ +EA EM +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ P ++ + +G + D A++I L VS
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + + L+ G + + A +V++M++ G PD TF +L+ + + +
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D+ TY +I + K G D A LL+ + + +Y+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + DDA F+E+ KG P+ Y++LI+ GR+ +A+ L +M E
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P F+ + D GK AEK+
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKL 332
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V + L+ G L A+++ ++MI++ DP++ T+NSLI C
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + DV TY LI KA + + L ++ G Y
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ D+A F ++ G PN Y TL+ + G+ +A + +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P ++++++G+ GK
Sbjct: 481 MEPDIYTYNIMSEGMCKAGK 500
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ G L+ A+Q+ M+ + PD+ T+N+LI CK+ +
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E++ + + G + TY LI +A D A + +V DG +P Y
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ + A F ++ P+ Y + + G+ + + ++ G
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 181 LTPISRCFDLVTDGL 195
+ P ++ + G
Sbjct: 516 VKPDVIAYNTMISGF 530
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V L+ L N G A ++++ M+++ +P++ TFNSLI+ K G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + ++ TY LI +DEA ++ +V P Y
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D F ++ +G N YTTLI + A +M G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P ++ + DGL GK + A
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++ GL G + A ++NKM K + D+ ++++I+++CK
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G DV TY LI + G +A RLL +++E NP +
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +A F E+ + PN Y +LI R EA M
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 181 LTPISRCFDLVTDGL 195
P ++ + +G
Sbjct: 376 CLPDVVTYNTLINGF 390
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L +++ A + +M +G PD+ T++SLI +C G + + +
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V T+ LI A +K G + EA +L +++ +P Y +I G + D+A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+ + K P+ Y TLI + + V+ +M+ GL + + + G
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 196 KNCGKHDLAEKIEQLEVS 213
D A+ + + VS
Sbjct: 426 FQASDCDNAQMVFKQMVS 443
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
KM G +L T+N +I +C+ ++ F + + + KLG + T L+
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
I EA L+ +VE G+ P + ++ G F+ + +A + +KG P+ Y
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 155 TLIT-MCGRG 163
+I +C RG
Sbjct: 210 AVINGLCKRG 219
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 76/179 (42%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L+ A + +M+K P + F+ L+ I K + + + + LG ++ TY I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + + + A +L +++ G+ P ++ G + +A ++ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ P+ +TTL+ + + EA + M G P + V +GL G+ DLA
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P V + ++ G G E A + KM + G PD T+N+LI + G+
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
E+ + D STY L+ + G +D+ F
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 609
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++GF P V + L+ GL + G + A + +KM + G P++ T+ +LI+ K+G+
Sbjct: 345 MAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGD 404
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G +V Y ++ + ++ M +A+ L+ + D P +
Sbjct: 405 LVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNT 464
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IKG G+ + A F +++ G PN Y ++ + R EA + EM E G
Sbjct: 465 FIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKG 524
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + G N GK + A K+
Sbjct: 525 MELNLVTYNTIFGGFCNVGKFEEALKL 551
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P V L++G G + A + N+M ++G +P++ +N+LI +C G+
Sbjct: 310 MFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGK 369
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + + G +VSTY LI +KAG + A + + ++ +G P +Y
Sbjct: 370 MGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTS 429
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R F A+ ++ PPN + T I GR A N +M + G
Sbjct: 430 MVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYG 489
Query: 181 LTPISRCFDLVTDGL 195
+P + ++ V DGL
Sbjct: 490 CSPNIKTYNEVLDGL 504
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 5/200 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++L++ L ++ A +++ +M +G +PD+ ++ ++I ++ K G+
Sbjct: 175 MKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK 234
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE E+ + +VS Y LI + + E F LL +VE G +P Y+
Sbjct: 235 VEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYST 289
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + A ++++ ++G PN +T+L+ GR +EA N M E G
Sbjct: 290 VISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG 349
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++ + GL + GK
Sbjct: 350 FEPNVVAYNTLIHGLCSHGK 369
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 5/199 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P V ++ + G +E A+++ + P++ +N+LI C+ +
Sbjct: 210 MSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYNALINGFCREYK 264
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G +V TY +I ++S G ++ A + + G +P +
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG F RG+ +A ++ + +G PN Y TLI G+ EA + +M G
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384
Query: 181 LTPISRCFDLVTDGLKNCG 199
+P + + DG G
Sbjct: 385 CSPNVSTYGALIDGFAKAG 403
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P V + L+ G ++ ++ +M+++G DP++ T++++I ++ G VE +
Sbjct: 245 FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + G +V T+ L+ G + EA + + + E+G P Y +I G
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ +A S+++ G PN Y LI + G V A+ +M G P
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +V L + A ++ KM P+ TFN+ I+ +C SG
Sbjct: 415 MMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGR 474
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++ + + G ++ TY ++ + K I EA L+ + E G Y
Sbjct: 475 VECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNT 534
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G G+F++A ++ + G P+ Y TL G+ A L +++ G
Sbjct: 535 IFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGG 594
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 5/182 (2%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
G E A +M ++ + G P ++ +N L++ + + +Y ++ + G +V T
Sbjct: 127 VGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYT 186
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y IL+ A+ K +D A +LL + G P Y +I + G+ ++A E+
Sbjct: 187 YNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA----RELS 242
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
I+ PN VY LI R + E L +M E G+ P + V L G +
Sbjct: 243 IR-FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301
Query: 203 LA 204
LA
Sbjct: 302 LA 303
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + G+ ++A ++ + + E G P +Y ++ +F +S +K G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN Y L+ + R A L+EM+ G P + V + GK +
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVE--- 236
Query: 206 KIEQLEVSLR 215
E E+S+R
Sbjct: 237 --EARELSIR 244
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P LV L G + A Q+V+KM + G + T+NSL+ +C G
Sbjct: 123 MIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGN 182
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G + TY L+ A K DEA +LL ++ G P Y
Sbjct: 183 LTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNV 242
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +DA F E+ KG PN Y L+ GR+ EA L EM
Sbjct: 243 LLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDE 302
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+P + ++++ L G+ + A +E LE +R+
Sbjct: 303 RSPSTVTYNILIGSLTLHGRTEHA--LEVLEEMIRA 336
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V L+ L + A +++ MI G PD ++ L+ ++C+ G
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + +++ + + G + +TY L+ + G + ++ +LL L++ G P Y+
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ A++ D+A EI KG PN Y L+T + GR +A E+ G
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG 267
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P ++++ L N G+ + A
Sbjct: 268 FSPNVVSYNILLRSLCNEGRWEEA 291
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KGF+P V ++L++ L N G E A ++ +M P T+N LI ++ G
Sbjct: 263 LPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGR 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + + S+Y +I + K +D + L ++ NP Y
Sbjct: 323 TEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G +AF + K H + Y +IT R G A L EMT+ G
Sbjct: 383 -IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYG 441
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
TP S + + GL C + L E IE V
Sbjct: 442 FTPDSFTYSSLIRGL--CMEGMLNEAIEIFSV 471
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ + LV+GL G L + Q+++++I++G P+ T++ L+E K
Sbjct: 158 MEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERG 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G ++ +Y +L+ + K G ++A +L L G +P Y
Sbjct: 218 ADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNI 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ G++++A +E+ P+ Y LI GR A L EM
Sbjct: 278 LLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRAR 337
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
P + ++ + L K DL K
Sbjct: 338 FKPTASSYNPIIARLCKDRKVDLVVK 363
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 9/176 (5%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV- 65
+P ++L+ L G E A +++ +MI+ P ++N +I +CK +V+ V
Sbjct: 304 SPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVK 363
Query: 66 ---EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+M Y C + TY I + + GM+ EAF ++ +L H Y +I
Sbjct: 364 CLDQMMYRHCN----PNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVI 418
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
R+G AF E+ G P+ Y++LI G EA M E
Sbjct: 419 TSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE 474
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF P L++GL G L A ++ + M ++ D E +NSLI CKS
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRR 495
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ ++++ + G A+ +TY IL+ + +D A +L L
Sbjct: 496 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 541
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
P G + L G ++ A ++ + + E + +I ++C+ G ++
Sbjct: 375 PNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLL 434
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
Y + K G D TY LI + GM++EA + +++E+ Y +I G +
Sbjct: 435 YEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF-SVMEENIKLDTENYNSLILGCCKS 493
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
+ D A F + KG+ N YT L+
Sbjct: 494 RRTDLALDVFEIMVGKGYLANETTYTILV 522
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG P V L+ L G + A +++ M+++G +P++ T+N LI +CK G
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V+ + + + + G DV TY LI +S +DEA LL +V + P++ +
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I+G G+ AF + ++ G N Y LI R + +A + EMT
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+GL P S + ++ G + D AE +
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDL 419
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+LL+ GLL + A +++++M G +PD T++ LI+ CK +V+ ++ ++
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP---SLYAPIIKGAFRRGQ 130
G ++ Y L+ A+ + GM++ A NL + N FP Y+ +I GA + G
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERA----RNLFNEMDNNFPLDVVAYSTMIHGACKAGD 481
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
A I +G P+ Y+ +I M + G A L +MT G P FD
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541
Query: 191 VTDGLKNCGK 200
+ G G+
Sbjct: 542 LIQGYSTKGE 551
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 2/178 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKS 58
MS+KG P V + L++GL + ++ A ++ +M++ + P++ TFNS+I+ +C
Sbjct: 281 MSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI 340
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
G + ++ + + G ++ TY +LI + + + +A L+ + G P Y
Sbjct: 341 GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ +IKG + Q D A S ++ +G P Y L+ G A N EM
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + ++QGL + G + A Q+ M + G +L T+N LI + + +V +E+
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ LG D TY ILI K +D A LL + + G P Y P++
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G + A F+E+ P + Y+T+I + G A L + + GLTP +
Sbjct: 445 QGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ +V + G + A +
Sbjct: 504 YSIVINMFAKSGDMEAANGV 523
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V L++GL +A ++ A +++ +M + G +P++ ++SL++ CKSG
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++ + + G DV Y LI ++ K G +A ++ +V G P Y
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +A ++ KG P+ Y TLI EA L EM
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320
Query: 181 --LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P F+ V GL + G+ A ++ +
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P +L++ L + A ++ M G D+ T+ +LI +C + EV+ VE+
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+C+ G +V Y L+ K+G ++ ++ + E G P +Y +I +
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ A + +G PN Y LI + G EA L +M+E G+ P
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 188 FDLVTDGLKNCGKHDLA 204
++ + GL + + D A
Sbjct: 293 YNTLIKGLSDVLEMDEA 309
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P + L+ + G +E A+ + N+M D+ ++++I CK+G+
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGD 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ S+ G D TY I+I +K+G ++ A +L + G P +++
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
+I+G +G+ + E+ K + + +TL T
Sbjct: 542 LIQGYSTKGEINKVLELIREMITKNIALDSKIISTLST 579
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMY-------YSVCKLGSCADVSTYKILIPAVSKAGMI 96
D ++N+++ +C+ G + + + C+ + +Y +L+ A+ +
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACR----PNAVSYTVLMRALCADRLA 131
Query: 97 DEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTL 156
D+A LL ++ G Y +I+G + D A E+ G PN VY++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191
Query: 157 ITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ + GR+ + +EM+E G+ P + + D L GK A + + V
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V ++L+ L G ++ AK ++ M+K PD+ T+NSLI+ E
Sbjct: 258 MKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDE 317
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL----------------- 103
V+ ++YS+ + G DV Y +I + K M+DEA L
Sbjct: 318 VKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNS 377
Query: 104 --------HNL----------VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
H+L E G P Y ++ G + G+ +DA F + KG
Sbjct: 378 LIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKG 437
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
+ N YT LI + G F EA + +M + G P + FD++ L ++D AE
Sbjct: 438 YHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAE 497
Query: 206 KI 207
KI
Sbjct: 498 KI 499
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ G G+L+ A ++N+M + +P++ TFN LI+ + K G+
Sbjct: 223 MIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGK 282
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K DV TY LI + A + +++ + G P Y
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F E+K K P+ Y +LI + A M E G
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + ++ DGL G+ + A++I Q
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQ 431
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF+P + L++GL G ++ A ++++ QG D ++ +LI +CK+GE +
Sbjct: 121 RGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKA 180
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + DV Y +I ++ K ++ +A + ++ G +P Y +I
Sbjct: 181 VARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIH 240
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G +AF +E+K+K PN + LI + G+ EA L M + + P
Sbjct: 241 GFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKP 300
Query: 184 ISRCFDLVTDG 194
++ + DG
Sbjct: 301 DVFTYNSLIDG 311
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + +L+ + ++ A + ++K+G P+ T N+LI+ +C GE++
Sbjct: 87 GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKA 146
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS--LYAPII 122
+ + + G D +Y LI + K G RLL L +GH+ P +Y II
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKL--EGHSVKPDVVMYNTII 204
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ DA +SE+ +KG P+ YTTLI G EA + L EM +
Sbjct: 205 NSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNIN 264
Query: 183 PISRCFDLVTDGLKNCGK 200
P F+++ D L GK
Sbjct: 265 PNVCTFNILIDALSKEGK 282
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P V+ ++ GL ++ A + +M + PD+ T+NSLI+ +CK+
Sbjct: 328 MAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHH 387
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G DV +Y IL+ + K+G +++A + L+ G++ Y
Sbjct: 388 LERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTV 447
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G FD+A S+++ KG P+ + +I +A L EM G
Sbjct: 448 LINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507
Query: 181 L 181
L
Sbjct: 508 L 508
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF L+ GL G ++ +++ K+ PD+ +N++I ++CK+ +
Sbjct: 156 QGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGD 215
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++Y + G DV TY LI G + EAF LL+ + NP + +I
Sbjct: 216 ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILID 275
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF----VEAANYLM-EMTE 178
+ G+ +A + + P+ Y +LI G F V+ A Y+ M +
Sbjct: 276 ALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLI-----DGYFLVDEVKHAKYVFYSMAQ 330
Query: 179 MGLTPISRCFDLVTDGL 195
G+TP +C+ + +GL
Sbjct: 331 RGVTPDVQCYTNMINGL 347
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 65/162 (40%)
Query: 34 NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA 93
N M+ P FN+++ ++ + + ++ G D+ T ILI
Sbjct: 46 NLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQ 105
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
I AF + N+++ G +P +IKG RG+ A F ++ +G ++ Y
Sbjct: 106 AHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSY 165
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
TLI + G A L ++ + P ++ + + L
Sbjct: 166 GTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSL 207
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV G L+ A +M M + G P + +++ + K G VE E + C+LG
Sbjct: 273 LVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVE---EAFRLACQLG 329
Query: 76 S---CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
++ Y L+ + K GM EA RL++ + + G P YA +I +RG D
Sbjct: 330 ELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMD 389
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DA C ++ KG Y +LI C + A +L EM E+GLTP + + V
Sbjct: 390 DALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVI 449
Query: 193 DGLKNCGKHDLAEKIE 208
GL C K DL+ +E
Sbjct: 450 AGL--CRKGDLSGAVE 463
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + + L+ + G A ++VN+M +G +P+ T+ LI ++CK G ++ + M
Sbjct: 335 PNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCM 394
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G V Y LI K +D A L +VE G P + Y+P+I G R
Sbjct: 395 LDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCR 454
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G A ++ KG N +T LI + + EA+ +MTE L P
Sbjct: 455 KGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVT 514
Query: 188 FDLVTDG 194
F+ V +G
Sbjct: 515 FNAVIEG 521
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P LV L + +L SA+ + +M+ P+ TFN ++ G
Sbjct: 678 MIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGN 737
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++Y+++ + G A++ + LI K G I EA L+ E+G P Y+
Sbjct: 738 LETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYST 796
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G ++A ++E+ KG P+ Y LI C G + ++M + G
Sbjct: 797 VIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKG 856
Query: 181 LTP 183
+ P
Sbjct: 857 VQP 859
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF P ++ GL G +E A ++ ++ + P++ +N+L+ +CK+G
Sbjct: 293 MARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGM 352
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + G + TY ILI ++ K GM+D+A +L + E G Y
Sbjct: 353 FSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNS 412
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ D A F SE+ G PN Y+ +I R G A +M E G
Sbjct: 413 LINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKG 472
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + F + +G K D A ++
Sbjct: 473 VAWNTYTFTALINGFCKAKKMDEASRL 499
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG V + L+ L+ A +++M++ G P+ +++ +I +C+ G+
Sbjct: 398 MREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGD 457
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE++ + + G + T+ LI KA +DEA RL + + E P +
Sbjct: 458 LSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNA 517
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
+I+G G AF + ++ +G P+ Y +LI+
Sbjct: 518 VIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLIS 555
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC---- 56
M++ P + +++G G + A Q+ ++M+ +G PD T+ SLI +C
Sbjct: 503 MTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDG 562
Query: 57 KSGEVEFCVEMYYSVCKLGSCADVSTYKI--LIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
S EF ++ +C+ ++ + + L+ + G + EA+ + + + G
Sbjct: 563 ASKAKEFVADLE------NNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLD 616
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+ I+ A ++ + + F E+K KG P+ +T +I M + G V+A N
Sbjct: 617 LISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWD 676
Query: 175 EMTEMGLTPISRCFDLVTDGL 195
EM G P + + + + L
Sbjct: 677 EMIADGHLPNTVTYTALVNNL 697
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G LE+AK + M+ QG ++ + N+LI+ CK G+++ +++ + G D +Y
Sbjct: 736 GNLETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISY 794
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
+I + K G I+EA L + ++ G P Y +I+ G+ D + ++
Sbjct: 795 STVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVK 854
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
KG PN + L G + N LM
Sbjct: 855 KGVQPNWHTHRALFV----GTSLMSKGNTLM 881
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 74/204 (36%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P L+ GL AK+ V + S + + +L+ C+ G +
Sbjct: 541 RGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTE 600
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D+ ++ I++ A K +++ L + E G P + +I
Sbjct: 601 AYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMIN 660
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G A + E+ GH PN YT L+ + A EM P
Sbjct: 661 MYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLP 720
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
S F+ D G + A+ +
Sbjct: 721 NSYTFNCFLDYFATEGNLETAKDL 744
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 59/169 (34%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G L A + N+M G DL +F ++ K + E ++ + + G
Sbjct: 588 LLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKG 647
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D + +I SK G + +A ++ DGH P Y ++ + A
Sbjct: 648 VRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAE 707
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
E+ PN + + G A + M + L I
Sbjct: 708 LLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANI 756
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
++ GF P ++ L G + A ++ N+M+ +G PD+ +N LI GE
Sbjct: 783 TENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGES 842
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ C+ +Y + K G + T++ L S
Sbjct: 843 DKCLGIYIDMVKKGVQPNWHTHRALFVGTS 872
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 3/204 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L L +G E A ++++G T+ SL++ K+G
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGN 610
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+F + + G AD+ TY +L+ A+ K ++EA +L + G Y
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II + G+ D A F+E+ GH P+ YT I+ + GR EA + + EM G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG 730
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+TP +++ +G + G D A
Sbjct: 731 VTPDVVTYNIFINGCGHMGYIDRA 754
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ L+ L+ AK+ +N+M G P++ T+ S+I+ CK G V +E++ +
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHE 487
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + TY LI + + + +A L+ + EDG P Y +I+G ++ +FD+A
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 547
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F F ++ G P+ Y L + GR EA ++L+ G+ + + DG
Sbjct: 548 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDG 604
Query: 195 LKNCGKHDLA 204
G D A
Sbjct: 605 FSKAGNTDFA 614
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV G AG + A ++ KM+ +G DL T++ L++ +CK ++ + + + G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ Y I+I + K G D A L + ++ GH P + Y I + G+ ++A
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAE 720
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
E++ G P+ Y I CG G A + L M + P
Sbjct: 721 HLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEP 768
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + L+ GL G L+ A++++N I +G P + TF +LI CK+
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403
Query: 61 VEFCVE----MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
++ + M S CKL D+ Y +LI + K + EA L+ + +G P
Sbjct: 404 IDDALRVKSNMISSNCKL----DLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVV 459
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y II G + G A F ++ +G PN Y +LI + + +A + +M
Sbjct: 460 TYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKM 519
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
E G+TP + + G C KH+ E+
Sbjct: 520 QEDGITPGVITYTTLIQG--QCKKHEFDNAFRLFEM 553
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 95/258 (36%), Gaps = 51/258 (19%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G + +++ ++ G + AK + N+MI G P T+ I + CK G
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF-------------------- 100
+E + + + G DV TY I I G ID AF
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWL 775
Query: 101 -------------------------------RLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+LL +++ G NP Y+ II G +
Sbjct: 776 LLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ ++A + K PN +YT LI C F +A +++ +M E G P +
Sbjct: 836 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYH 895
Query: 190 LVTDGLKNCGKHDLAEKI 207
+ GL + G +D A+ +
Sbjct: 896 YLIVGLCDEGDYDRAKSL 913
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P V L+ G A ++ A ++ + MI DL+ + LI + K ++
Sbjct: 382 RGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE 441
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
E + G +V TY +I K GM+ A + + +G +P Y +I
Sbjct: 442 AKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIY 501
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + + A ++++ G P YTTLI + F A M + GLTP
Sbjct: 502 GLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 561
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ ++++TD L G+ + A
Sbjct: 562 DEQAYNVLTDALCKSGRAEEA 582
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P L+ GL+ L A ++ KM + G P + T+ +LI+ CK E
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 543
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G D Y +L A+ K+G +EA+ LV G Y
Sbjct: 544 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTS 600
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G D A ++ +G + Y+ L+ + + EA + L +MT G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + ++ + GKHD A+ +
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSL 687
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE-----FCV--- 65
+L ++ LL E ++ + ++++G PD T+N++I CK G + FC+
Sbjct: 148 NLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRE 207
Query: 66 ---EMYYSVCK---LGSC--ADVS-------------------TYKILIPAVSKAGMIDE 98
+M C LG C +D+ +Y ILI + +A + E
Sbjct: 208 SGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVRE 267
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A L+ +V DG + Y +IKG + G+ DA E+ ++G P+ Y +I
Sbjct: 268 ALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMID 327
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ GR +A M + G P ++ + GL GK D AE++
Sbjct: 328 GYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEEL 375
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 5/211 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++ G G + +A ++ M +G P+ T+ SLI + + +
Sbjct: 449 MFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKK 508
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + + G V TY LI K D AFRL + ++G P Y
Sbjct: 509 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 568
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + G+ ++A+ F KG + YT+L+ + G AA + +M G
Sbjct: 569 LTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ ++ L C + L E + L+
Sbjct: 626 CKADLYTYSVLLQAL--CKQKKLNEALSILD 654
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 63/157 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G + +L+Q L L A ++++M G ++ + +I + K G+
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G +TY + I + K G I+EA L+ + DG P Y
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNI 740
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
I G G D AF + PN Y L+
Sbjct: 741 FINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL 777
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + + G ++ A ++ ++M +G P+ T+N+LI+ +C++
Sbjct: 171 MVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALR 230
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +C G D+ Y L+ K G +DE L + P +Y
Sbjct: 231 PRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTI 290
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G R + DA S + ++G P+ YT L+ R G +EA +M E G
Sbjct: 291 IINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDG 350
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
P S ++++ L+ C +H+ + QL
Sbjct: 351 CMPGSCSYNVL---LQGCLQHNDTSTVVQL 377
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V +L+ +++ + K +K+G PD+ F +LI+ +C+ G+
Sbjct: 66 MEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGK 125
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E + + +G DV T L+ G ID+ ++ H +V G P Y+
Sbjct: 126 TELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSI 185
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + + D+A F E+ +G PN Y TLI + R +A +M G
Sbjct: 186 FINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACG 245
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
L+P + + DG G D
Sbjct: 246 LSPDILAYSTLLDGFCKQGNLD 267
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L++G + G ++ +++ + M+ +G PD+ +++ I CK +++
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E++ + G + TY LI A+ +A +A L + G +P Y+ ++ G
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++G D+ F E++ + P+ VYT +I R + +A L + GL P
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319
Query: 185 SRCFDLVTDGL 195
+ + DGL
Sbjct: 320 VHTYTALVDGL 330
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+GF P V L+ G+ G E A ++ +M G PD+ T NSL+ C G+++
Sbjct: 104 RGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDK 163
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++++ + G DV +Y I I K IDEA L + G P Y +IK
Sbjct: 164 VRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIK 223
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ + DA F ++ G P+ Y+TL+ + G E EM + P
Sbjct: 224 ALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKP 283
Query: 184 ISRCFDLVTDGL 195
+ ++ +G+
Sbjct: 284 DLVVYTIIINGM 295
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G P + L++ L A A+ + KM G PD+ +++L++ CK G
Sbjct: 206 MSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGN 265
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + + D+ Y I+I + ++ + +A +L L+ +G P Y
Sbjct: 266 LDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTA 325
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R G +A F +++ G P Y L+ C + + EM + G
Sbjct: 326 LVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRG 385
Query: 181 L--TPISRCF 188
++R F
Sbjct: 386 FYADAVTRTF 395
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 3/195 (1%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G L+ A N+M+ + P + FN L+ ++ + + E V ++ + G +V T
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
ILI +D F + ++ G P ++ +I G R G+ + A E+ +
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
G P+ +L+ G+ + M GL P + + +G C +
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGY--CKVEKI 196
Query: 204 AEKIEQL-EVSLRSV 217
E +E E+S R V
Sbjct: 197 DEAMELFDEMSHRGV 211
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ G + +E ++ +M QG D T+N+LI C++G+
Sbjct: 840 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ TY IL+ + G I++A ++ +L + + Y
Sbjct: 900 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II+G R + +A+C F + KG P+ Y T+I+ R G EA M E G
Sbjct: 960 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019
Query: 181 LTPISRCFD 189
P R +D
Sbjct: 1020 FMPSERIYD 1028
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P + L+ G + A +V M+K G +P++ +N+LI+ +CK+GE
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + K G ADV TY L+ + +G +A R+L ++++ NP +
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G D+A + E+ PN Y ++I GR +A M G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 181 LTPISRCFDLVTDGL 195
P ++ + G
Sbjct: 312 CFPNVVTYNTLISGF 326
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 91/215 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G+ P V + L+ GL G L A +++N+M K+G D+ T+N+L+ +C SG
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
M + K DV T+ LI K G +DEA L +++ +P Y
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G G+ DA F + KG PN Y TLI+ + E M+ G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
++ + G GK +A I VS R
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + L+ GL N+G A +++ M+K+ DP++ F +LI+T K G
Sbjct: 735 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 794
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + + +V TY LI G + +A + +V G P Y
Sbjct: 795 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 854
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +D F E+ +G + Y TLI + G+ A M + G
Sbjct: 855 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 914
Query: 181 LTPISRCFDLVTDGLKNCGK 200
++P ++++ D L N GK
Sbjct: 915 VSPDIVTYNILLDCLCNNGK 934
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P + L+ G + A +V+ M G P++ +N++I +CK+ +
Sbjct: 665 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP----FPS 116
+ +E++Y + K G AD TY LI +S +G +A RLL ++V+ +P F +
Sbjct: 725 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784
Query: 117 L-------------------------------YAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L Y +I G G DA F + KG
Sbjct: 785 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y TLIT + R + EMT GL + ++ + G GK ++A+
Sbjct: 845 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904
Query: 206 KI 207
K+
Sbjct: 905 KV 906
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + L+ N E+ KM G DL +F LI C+ + F + +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ KLG + T+ L+ I +AF L+ +V+ G+ P +Y +I G +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ + A +E++ KG + Y TL+T GR+ +AA L +M + + P
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
F + D G D A+++
Sbjct: 249 FTALIDVFVKQGNLDEAQEL 268
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 2/192 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V + L+ GL +G A +M+ M+K+ +PD+ TF +LI+ K G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+Y + + + TY +I + G + +A + + G P Y
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+ F + +G + Y TLI + G+ A + M
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 181 LTP--ISRCFDL 190
+TP I+ C L
Sbjct: 382 VTPDIITHCILL 393
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 4/197 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P V L+ + G L A+ + +MI++ P++ T+NSLI C G
Sbjct: 770 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 829
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M+ + G DV TY LI K+ +++ +L + G Y
Sbjct: 830 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 889
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL--MEMTE 178
+I G + G+ + A F+ + G P+ Y L+ G+ +A + ++ +E
Sbjct: 890 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 949
Query: 179 MGLTPISRCFDLVTDGL 195
M + I+ ++++ GL
Sbjct: 950 MDVDIIT--YNIIIQGL 964
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 1/197 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL G L AK+ + M +G P++ T+N+LI CK V+ ++++ + G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
AD+ TY LI + G + A + +V P + ++ G G+ + A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F +++ Y +I + + +A + G+ P +R + ++ GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 196 -KNCGKHDLAEKIEQLE 211
KN + + E I +++
Sbjct: 467 CKNGPRREADELIRRMK 483
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +GFN + + L+ G G L A + M+ + PD+ T L+ +C +GE
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + + Y I+I + KA +++A+ L L +G P Y
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 121 IIKGAFRRG 129
+I G + G
Sbjct: 462 MILGLCKNG 470
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%)
Query: 13 RDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC 72
R+ L G L++ E A + +M+ P + F L+ E + +
Sbjct: 39 REKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKME 98
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
G D+ ++ ILI + + A +L +++ G+ P + ++ G +
Sbjct: 99 LYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIG 158
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DAF + G+ PN VY TLI + G A L EM + GL ++ +
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 193 DGLKNCGKHDLAEKI 207
GL G+ A ++
Sbjct: 219 TGLCYSGRWSDAARM 233
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%)
Query: 32 MVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVS 91
+ +KM G DL +F LI C+ + + + + KLG + T L+
Sbjct: 626 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 685
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
+ EA L+ ++ G P +Y +I G + ++A F ++ KG +
Sbjct: 686 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 745
Query: 152 VYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
Y TLI+ GR+ +AA L +M + + P
Sbjct: 746 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 777
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 75/182 (41%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
+ A + +M++ P + F ++ I K + + + +Y+ + LG D+ ++ I
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + + A LL +++ G P ++ G + +F +A + G
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN +Y T+I + A M + G+ + ++ + GL N G+ A
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764
Query: 206 KI 207
++
Sbjct: 765 RL 766
Score = 36.2 bits (82), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 45/213 (21%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS--- 70
++++ GL A +E A ++ ++ +G PD T+ +I +CK+G E+
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Query: 71 ---VCKLGSCAD-------------VSTYKI-------------LIPAVSKAGMIDEAFR 101
+C++ + D +S +I LIP ++ + + R
Sbjct: 485 EGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIP-IAFSSSVKGFVR 543
Query: 102 LLHNLVEDGHNPFPSL------------YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+ L+E G+NP SL Y ++ +FDDAF F E+ P+
Sbjct: 544 RHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPS 603
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+T ++T+ + +F +M +G++
Sbjct: 604 IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGIS 636
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V ++++ L G LE A+ + +M + G PD+ T+NSLI+ K G
Sbjct: 246 MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C+ ++ + DV TY LI K + +AF LH + +G P Y+
Sbjct: 306 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G +A FF +++ PN YT+LI + G EA + E+ + G
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + DGL G+ AE++
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEV 452
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R + L+ L G + +++ M G + T+N +I+ +CK G++E +
Sbjct: 218 PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 277
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G D+ TY LI K G++DE + + + +P Y +I +
Sbjct: 278 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 337
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ AF F E+K G PN Y+T I + G EA + ++M + LTP
Sbjct: 338 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 397
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ + D NC +LAE ++ +E L++
Sbjct: 398 YTSLIDA--NCKAGNLAEALKLVEEILQA 424
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + ++ GL N LE AK ++ ++ + G + + + +L++ KSG+
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + LG A TY LI + K+G++ EA + E G P ++Y
Sbjct: 551 ATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTA 610
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + F+ A F E+ KG P++ YT LI + G EA N M E+G
Sbjct: 611 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ + + GL + G+
Sbjct: 671 MELDLHAYTALIWGLSHSGQ 690
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ AG L A ++V ++++ G ++ T+ +L++ +C+ G ++ E++ ++ G
Sbjct: 401 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 460
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY L+ KA ++ A +L + E P LY I+ G + ++A
Sbjct: 461 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 520
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
EIK G N +YTTL+ + G+ EA L EM ++GL + + DGL
Sbjct: 521 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGL 580
Query: 196 KNCG 199
G
Sbjct: 581 CKSG 584
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 80/207 (38%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P + + L+ G G L+ + +M DPD+ T+N+LI CK
Sbjct: 281 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + + G +V TY I A K GM+ EA + ++ P Y
Sbjct: 341 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTS 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +A EI G N YT L+ GR EA M G
Sbjct: 401 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + G + + A+ I
Sbjct: 461 VAPNQETYTALVHGFIKAKEMEYAKDI 487
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G ++ A+++ M+ G P+ ET+ +L+ K+ E+E+ ++ + +
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ Y ++ + ++EA L+ + E G N +Y ++ F+ GQ +A
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ G Y LI + G EA ++ M+E+GL P + + DGL
Sbjct: 556 TLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGL 615
Query: 196 KNCGKHDLAEKI 207
++A+K+
Sbjct: 616 CKNNCFEVAKKL 627
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P LV G + A +E AK ++ +M ++ PDL + +++ +C
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 515
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G + Y L+ A K+G EA LL +++ G Y
Sbjct: 516 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G +A F + G PN VYT L+ + F A EM + G
Sbjct: 576 LIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG 635
Query: 181 LTPISRCFDLVTDG 194
+ P + + DG
Sbjct: 636 MMPDKIAYTALIDG 649
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D +P V + L+ + A + +++M G P++ T+++ I+ CK G
Sbjct: 316 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + ++ + TY LI A KAG + EA +L+ +++ G Y
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +A F + G PN+ YT L+ + A + L EM E
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495
Query: 181 LTPISRCFDLVTDGLKN 197
+ P + + GL N
Sbjct: 496 IKPDLLLYGTILWGLCN 512
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 3/204 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D L L+ G LE A + KM K P + N+L+ + K G + + + +
Sbjct: 189 DALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGA 248
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY I+I + K G ++ A L + E G P Y +I G + G D+
Sbjct: 249 AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDE 308
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
C F ++K P+ Y LI + R +A +L EM GL P + D
Sbjct: 309 CICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFID 368
Query: 194 GLKNCGKHDLAEKIEQLEVSLRSV 217
C + L E I + V +R V
Sbjct: 369 AF--CKEGMLQEAI-KFFVDMRRV 389
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P V LV GL E AK++ ++M+ +G PD + +LI+ K G
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + ++G D+ Y LI +S +G + +A LL ++ G P +Y
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+IK + G+ D+A +E+ +G
Sbjct: 716 LIKKYYALGKVDEALELQNEMAKRG 740
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P LV L G + A Q+V+KM + G + T+NSL+ +C G
Sbjct: 123 MIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGN 182
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G + TY L+ A K DEA +LL ++ G P Y
Sbjct: 183 LTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNV 242
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +DA F E+ KG PN Y L+ GR+ EA L EM
Sbjct: 243 LLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDE 302
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+P + ++++ L G+ + A +E LE +R+
Sbjct: 303 RSPSTVTYNILIGSLALHGRTEHA--LEVLEEMIRA 336
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P V L+ L A + A +++ MI G PD ++ L+ ++C+ G
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGN 147
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + +++ + + G + TY L+ + G + ++ +LL L++ G P Y+
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ A++ D+A EI KG PN Y L+T + GR +A E+ G
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKG 267
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+P ++++ L N G+ + A
Sbjct: 268 FSPNVVSYNILLRSLCNEGRWEEA 291
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KGF+P V ++L++ L N G E A ++ +M P T+N LI ++ G
Sbjct: 263 LPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGR 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +E+ + + S+Y +I + K G +D + L ++ NP Y
Sbjct: 323 TEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G +AF + K H + Y +IT R G A L EMT+ G
Sbjct: 383 -IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYG 441
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
TP S + + GL C + L E IE V
Sbjct: 442 FTPDSFTYSSLIRGL--CMEGMLNEAIEIFSV 471
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 9/215 (4%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P + ++ L G L+ + +++M+ + +P+ T+N+ I T+C+ G V+
Sbjct: 338 FKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQ--- 393
Query: 66 EMYYSVCKLGSCADVST---YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
E + + LG+ ST YKI+I ++ + G AF+LL+ + + G P Y+ +I
Sbjct: 394 EAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+G G ++A FS ++ + + P+ Y +LI C + R A + M G
Sbjct: 454 RGLCMEGMLNEAIEIFSVME-ENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P + ++ +G+ + + DLA K+ + E+ LR V
Sbjct: 513 PNETTYTILVEGIIHEKEMDLATKVLR-ELQLRDV 546
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ + LV+GL G L + Q+++++I++G P+ T++ L+E K
Sbjct: 158 MEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERG 217
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G ++ +Y +L+ + K G ++A RL L G +P Y
Sbjct: 218 ADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNI 277
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ G++++A +E+ P+ Y LI GR A L EM
Sbjct: 278 LLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRAR 337
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
P + ++ + L GK DL K
Sbjct: 338 FKPTASSYNPIIAHLCKDGKLDLVVK 363
>gi|302795027|ref|XP_002979277.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
gi|300153045|gb|EFJ19685.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
Length = 570
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI----KQGSDPDLETFNSLIETICKS 58
D G+ P + LV GL AG + A ++ +M + + L N+LI+ +C++
Sbjct: 100 DLGWMPSAVTCNTLVAGLCKAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRA 159
Query: 59 GEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSL 117
G V+ +E+ + CK + + TY ILI + K+ +++ RLL + G NP +
Sbjct: 160 GRVDEALELVFEGCKDKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAAT 219
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT-TLITMCGRGGRFVEAANYLMEM 176
Y I+ G + A FS + PV TL+ + GR ++A L EM
Sbjct: 220 YNSIVAGFCELDMVEQALELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEM 279
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+G P S+ + L+ + L N G+ D A K+
Sbjct: 280 DRVGCQPSSQVYCLMIEELCNSGEADKACKL 310
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD--PDLETFNSLIETICKSG 59
+ +G NP + +V G +E A ++ + + QG+ PD +L+ +CKSG
Sbjct: 209 TSRGLNPDAATYNSIVAGFCELDMVEQALELFSN-VTQGNKCAPDPVMIGTLVNGLCKSG 267
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS-LY 118
+E+ + ++G Y ++I + +G D+A +LLH + G P + Y
Sbjct: 268 RSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTY 327
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG------RGGRFVEAANY 172
I+ G ++ + + A +KG + +++T C + GRF EA +
Sbjct: 328 TMIVDGLYKTHRPEKA-----RRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWF 382
Query: 173 LMEMTEMGLTPISRCFDLVTDGLKNCGK 200
L+ M +MG + ++ + GL K
Sbjct: 383 LLSMGQMGSKANTHIYNSLLGGLCKAAK 410
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Query: 4 KGFNPPVRGR-DLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSGEV 61
KG P G ++V GL E A++ + ++ S P + T ++I+ +CKSG
Sbjct: 317 KGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRF 376
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
S+ ++GS A+ Y L+ + KA + EA H + ++G P Y +
Sbjct: 377 SEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFFHEMQDEGL-PSVVTYNIL 435
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVE 168
+ G + + ++A F + P Y TL R G+ E
Sbjct: 436 LDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRSGKMAE 482
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ GL +G A+ + M + GS + +NSL+ +CK+ ++ +
Sbjct: 358 PSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAF 417
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ + G V TY IL+ K I+EA + +V+ P Y + +G R
Sbjct: 418 FHEMQDEG-LPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTR 476
Query: 128 RGQFDDAFCF 137
G+ + + F
Sbjct: 477 SGKMAEDYQF 486
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF V ++L++GL A ++ +M + PD+ ++N++I C+ E
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G + T+ ILI A KAG +DEA LL + G +Y
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G+ D F E+ +G P Y TLI + GR EA+ M E G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ P + + DGL CG E ++ L + L+
Sbjct: 313 VRPNVYTYTGLIDGL--CGVGKTKEALQLLNLMLQ 345
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V + +++G LE A Q+ N+M G L T+ LI+ CK+G+
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G AD+ Y LI G +D L ++E G +P Y
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEM 179
+I+G + G+ +A F + +G PN YT LI +CG G+ EA L M +
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGV-GKTKEALQLLNLMLQK 346
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
P ++++ + L C +A+ +E +E+
Sbjct: 347 DEEPNVVTYNIIINKL--CKDSLVADALEIVEL 377
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKSGEVEFCVEMY-YSVC 72
L+ GL G L+ A +++ M+K S DPD+ +FN+LI +CK + +++Y V
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVE 452
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
KLG+ D+ T IL+ + K+G +++A L + P Y +I G + G +
Sbjct: 453 KLGA-GDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLN 511
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A ++++ PP+ Y L++ + G +A EM P F+++
Sbjct: 512 VAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMI 571
Query: 193 DGLKNCGKHDLAEKI 207
DG G AE +
Sbjct: 572 DGSLKAGDIKSAESL 586
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ AG ++ A ++ +M +G + DL + SLI C GE++ ++ V +
Sbjct: 217 ILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G TY LI K G + EA + ++E G P Y +I G G+ +A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ + K PN Y +I + +A + M + P + ++ + G
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGG 396
Query: 195 LKNCGKHDLAEKIEQLEVSLR 215
L C K DL E + L + L+
Sbjct: 397 L--CAKGDLDEASKLLYLMLK 415
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P V L+ GL G + A Q++N M+++ +P++ T+N +I +CK
Sbjct: 308 MMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSL 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--Y 118
V +E+ + K + D TY L+ + G +DEA +LL+ +++D P + +
Sbjct: 368 VADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISF 427
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + + A + + K + L+ + G +A +++
Sbjct: 428 NALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISN 487
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAE 205
+ P S + + DG G ++A+
Sbjct: 488 SKIVPNSDTYTTMIDGFCKTGMLNVAK 514
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG + L++G + G L+ K + ++++++G P T+N+LI CK G
Sbjct: 238 MKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGR 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + + G +V TY LI + G EA +LL+ +++ P Y
Sbjct: 298 LKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNI 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRG 163
II + DA +K + P+ Y +L+ +C +G
Sbjct: 358 IINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKG 401
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G G L AK ++ KM P + +N L+ ++CK G ++ ++ + +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDD 559
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S DV ++ I+I KAG I A LL + G +P Y+ +I + G D+A
Sbjct: 560 SFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMC 160
FF ++ G P+ + +++ C
Sbjct: 620 SFFDKMIDSGFEPDAHICDSVLKYC 644
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V + L+ GL L A + + ++++ D+ T N L+ + KSG+V +E
Sbjct: 421 DPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAME 480
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + + TY +I K GM++ A LL + P Y ++
Sbjct: 481 LWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLC 540
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++G D A+ F E++ P+ + +I + G A + L+ M+ GL+P
Sbjct: 541 KKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSP 597
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ L G L+ A ++ +M + S PD+ +FN +I+ K+G+++ +
Sbjct: 527 PSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESL 586
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G D+ TY LI K G +DEA +++ G P + ++K
Sbjct: 587 LVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCIS 646
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGG 164
+G+ D F ++ K ++ + T++ MC G
Sbjct: 647 QGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSG 684
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 1/200 (0%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D G + G +L+ L+ + E A KM++ + + + + L+E + +
Sbjct: 66 DSGGSLSFAGNNLMAT-LVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTG 124
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
F + + K G +V Y IL+ + + +A LL + ++ P Y +I
Sbjct: 125 FAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVI 184
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+G + + A +E++ G + + LI + G+ EA L EM GL
Sbjct: 185 RGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLE 244
Query: 183 PISRCFDLVTDGLKNCGKHD 202
+ + G +CG+ D
Sbjct: 245 ADLIVYTSLIRGFCDCGELD 264
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G +P + L+ L GYL+ A +KMI G +PD +S+++ GE
Sbjct: 590 MSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGE 649
Query: 61 VEFCVEMYYSVCKLGSCADVS-TYKILIPAVSKAGMIDEAFRLLH 104
+ E + D T ++ S +G +D A RLL
Sbjct: 650 TDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLR 694
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG + L+QGL N L+ AK ++ KM + G +P+ + ++++ KSG+
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + M + G +V TY LI + KAG IDEA + + + G +P Y
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTA 543
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G ++A F+E+ KG ++ VYT L+ + G +A +M + G
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603
Query: 181 LTPISRCFDLVTDGLKN 197
L C+ G N
Sbjct: 604 LQLDLFCYTCFISGFCN 620
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + L+ G G L+ +Q+V +M + G D+ T+N+LI CK G
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + G A+V T+ + A K G++ EA +L + G Y
Sbjct: 274 METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTC 333
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DDA E+ +G P N YT L+ + + EA + L M + G
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 181 L 181
+
Sbjct: 394 V 394
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 2/192 (1%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF P V L+ GL AG ++ A NKM G DP+++ + +L++ +CK+G +
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V+++ + G D Y L+ K G + +AF L +++ G Y I
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G +A FSE+ G P+R VY LI+ + G EA + EM +
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER--VL 673
Query: 183 PISRCFDLVTDG 194
P D TDG
Sbjct: 674 PSCTDSDTATDG 685
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ L G L A+ + ++M + G PD+ TFNSLI+ K GE++ ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G ADV TY LI K G ++ A+ + +G ++ + +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F++++++G N YT LI + GR +A L EM G+
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEV 212
+ ++ DGL C + +AE + L +
Sbjct: 366 YTVLVDGL--CKERKVAEAEDVLRM 388
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG L+ A ++++M++QG ++ T+ L++ +CK +V ++ + K G
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+ Y LI ++A LL + G SLY +I+G + D+A
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+++ G PN +YTT++ C + G+ EA L ++ + G P + + DGL
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513
Query: 196 KNCGKHDLA 204
G D A
Sbjct: 514 CKAGSIDEA 522
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 10 VRGRDLLVQGLLNAGYL----ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
VR +LL L++ ++ E A ++++M +G + D+ + +LI+ +C +++
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + G + Y ++ A K+G + EA +L +++ G P Y +I G
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G D+A F++++ G PN YT L+ + G EA EM G++
Sbjct: 514 CKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573
Query: 186 RCFDLVTDG-LKNCGKHD 202
+ + DG LK HD
Sbjct: 574 VVYTALLDGYLKQGNLHD 591
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 82/176 (46%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ + ++V ++ +Q P++ TFN +I+ +CK GE+ ++ + ++G DV T+ L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
I K G +DE +L+ + G Y +I + G+ + A+ +F+ +K +G
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
N ++T + + G EA +M G+ + + DG G+ D
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLD 345
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V V G + A ++ +M +G + T+ LI+ CK+G
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G +V TY +L+ + K + EA +L + + G LY
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F + A SE+K KG + +Y LI + EA + L +M E G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
L P + + D GK + E I L+ L S
Sbjct: 464 LEPNYIIYTTMMDACFKSGK--VPEAIAMLQKILDS 497
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G +P V+ LV GL G L A Q+ N+M+ +G D + +L++ K G
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D+ Y I M+ EA + ++ G P ++Y
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648
Query: 121 IIKGAFRRGQFDDAFCFFSEIK 142
+I + G ++A E++
Sbjct: 649 LISKYQKLGNLEEAISLQDEME 670
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P VR +L+ GL AG + + M ++G D +N++++ CKSG+V+
Sbjct: 54 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKA 113
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E + V+TY +I ++K +DEA+ L G +Y+ +I G
Sbjct: 114 YEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 173
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D+A+ E+ KG PN + +L+ + EA M EM +P
Sbjct: 174 FGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 233
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
+ + ++ +GL K++ A
Sbjct: 234 TYTYSILINGLCRVQKYNKA 253
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G P + + + + AG +E + + + G PD+ +++ LI + K+G+
Sbjct: 15 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 74
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++++ + G D Y ++ K+G +D+A+ L + P + Y
Sbjct: 75 ARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGS 134
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + + D+A+ F E K KG N VY++LI G+ GR EA L EM + G
Sbjct: 135 IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 194
Query: 181 LTPISRCFDLVTDGL 195
L P ++ + D L
Sbjct: 195 LAPNVYTWNSLMDAL 209
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%)
Query: 24 GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTY 83
G E ++ +M ++G PDL N+ ++ + K+G+VE ++ + G DV +Y
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 84 KILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI 143
ILI ++KAG E + H + + G Y ++ G + G+ D A+ E+K+
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
K PP Y ++I + R EA E G+ + + DG G+ D
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 182
Query: 204 A 204
A
Sbjct: 183 A 183
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P V ++ GL L+ A + + +G + ++ ++SLI+ K G
Sbjct: 120 MKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 179
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K G +V T+ L+ A+ KA I+EA ++ E +P Y+
Sbjct: 180 IDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 239
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R +++ AF F+ E++ +G PN YTT+I+ + G +A + G
Sbjct: 240 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANG 299
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P + F+ + +G+ + +
Sbjct: 300 GIPDAASFNALIEGMSHANR 319
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 8/210 (3%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG V L+ G G ++ A ++ +M+K+G P++ T+NSL++ + K+ E+
Sbjct: 158 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINE 217
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + S+ ++ + TY ILI + + ++AF + + G P Y +I
Sbjct: 218 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIS 277
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL-T 182
G + G DA F K G P+ + LI R +EA + E G
Sbjct: 278 GLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRI 337
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ C L+ D L AE IEQ V
Sbjct: 338 NVKACISLL-DALNK------AECIEQAAV 360
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + L+ L+ A + A M + P+ T++ LI +C+ +
Sbjct: 190 MMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 249
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + K G +V TY +I ++K G I +A L +G P + +
Sbjct: 250 YNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNA 309
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G + +A+ F E +++G
Sbjct: 310 LIEGMSHANRAIEAYHVFEETRLRG 334
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P LV L G + A Q+V KM + G + T+NSL+ +C G
Sbjct: 123 MIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGN 182
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ K G +V TY L+ A K DEA RLL +V G P Y
Sbjct: 183 LSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNV 242
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ ++A FF ++ KG PN Y L+ GR+ +A L EM
Sbjct: 243 LLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGE 302
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P F+++ L G+ D A ++
Sbjct: 303 RSPSIVTFNILIGSLALHGQTDQALEV 329
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P L+ L + + A +++ MI G+ PD + L+ +CK G
Sbjct: 88 MIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGN 147
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + +++ + + G + TY L+ + G + ++ ++L ++ G P Y+
Sbjct: 148 VGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSF 207
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ A++ D+A EI KG PN Y L+T + GR EA + ++ G
Sbjct: 208 LLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKG 267
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+P ++++ L G+ + A+++
Sbjct: 268 FSPNVVSYNILLRSLCYEGRWEKAKEL 294
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KGF+P V ++L++ L G E AK+++ +M P + TFN LI ++ G+
Sbjct: 263 LPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQ 322
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ + + A ++Y +I + K G +D + L ++ NP Y
Sbjct: 323 TDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA 382
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G+ +AF + K + Y +I+ R G A L EMT+ G
Sbjct: 383 IAV-LCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYG 441
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S + + GL + G D A +I
Sbjct: 442 FVPDSYTYSSLIRGLCSEGMLDEAMEI 468
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 69/168 (41%)
Query: 9 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
P G + L G ++ A ++ + + + + + +I ++C+ G ++
Sbjct: 375 PNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLL 434
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
Y + K G D TY LI + GM+DEA + + E+ P + +I G +
Sbjct: 435 YEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKC 494
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ D + F + KG+ PN YT ++ AA L E+
Sbjct: 495 RKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF P L++GL + G L+ A ++ + M + PD++ FN+LI +CK +
Sbjct: 437 MTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRK 496
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
+ + ++ + K G + +TY I++ ++ ++ A +L L
Sbjct: 497 TDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542
>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P + + LV G GY+ AKQ V +I+ G DPD T+ S I C+ EV+ +
Sbjct: 152 SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFK 211
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ + + G + +Y LI + +A IDEA LL + +D P Y +I
Sbjct: 212 VFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC 271
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
GQ +A F ++ G P+ +YT LI G EA+ L M E GL P
Sbjct: 272 GSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
Query: 187 CFDLVTDGLKNCGKHD----LAEKIEQ 209
++ + G H L++ +EQ
Sbjct: 332 TYNALIKGFCKKNVHKAMGLLSKMLEQ 358
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L G +E K++ +M++ PD+ TFN+L+ CK G V + + + G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY I + +D AF++ + ++G + Y +I G F + D+A
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 136 CFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTP 183
++K PN YT LI +CG G + EA N +M+E G+ P
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQK-SEAMNLFKQMSESGIKP 293
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 1/171 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL A ++ A ++ KM P++ T+ LI+ +C SG+ + ++ + + G
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG 290
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y +LI + +DEA LL +++E+G P Y +IKG F + A
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG-FCKKNVHKAM 349
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
S++ + P+ Y TLI G A L M E GL P R
Sbjct: 350 GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQR 400
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+N+L+ ++ + G VE +Y + + D+ T+ L+ K G + EA + + L+
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
+ G +P Y I G RR + D AF F E+ G N YT LI +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
EA + L++M + P R + ++ D L CG +E +
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDAL--CGSGQKSEAM 280
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+ G P +L+Q + L+ A ++ M++ G P++ T+N+LI+ CK
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN- 344
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP 113
V + + + + D+ TY LI +G +D A+RLL + E G P
Sbjct: 345 VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + + ++ GL ++G + + +N++++ G PD T+N++I C+ G+
Sbjct: 518 MKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQ 577
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + + + K D+ T IL+ + GM+D+A +L + + G Y
Sbjct: 578 VEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNT 637
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + +F++AF +E++ K P+ Y +++ GR EA ++ + E G
Sbjct: 638 IISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++LV G G+L+ A Q+++ M + PD+ T+N LI +CK G+
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + L DV TY LI + F L+ + G P Y
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++K + G+ D+A +++ G P+ + TLI + GR EA + EM+ G
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L S + + L CG+ L
Sbjct: 453 LKMNSVTLNTILHTL--CGERKL 473
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +++V+ + G +++A + KM + G PD TFN+LI CK+G
Sbjct: 378 MEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGR 437
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ M + + G + T ++ + +D+A++LL + + G+ Y
Sbjct: 438 LSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGT 497
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G+ +A + E+K K P+ Y T+I G+ ++ + L E+ E G
Sbjct: 498 LIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESG 557
Query: 181 LTPISRCFDLVTDG 194
L P ++ + G
Sbjct: 558 LVPDETTYNTIILG 571
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D P + ++ L G L A+ ++ M G P+ TFN L+ CK G
Sbjct: 238 MKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGW 297
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + DV TY +LI + K G IDEAFRL + P Y
Sbjct: 298 LKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNT 357
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F F +++ KG PN Y ++ + G+ A N L +M E G
Sbjct: 358 LINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESG 417
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+P F+ + +G G+
Sbjct: 418 FSPDCVTFNTLINGYCKAGR 437
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF+P + L+ G AG L A +M+++M ++G + T N+++ T+C +
Sbjct: 413 MEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERK 472
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ S K G D +Y LI K G EA +L + E P Y
Sbjct: 473 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNT 532
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D + +E+ G P+ Y T+I R G+ +A + +M +
Sbjct: 533 MIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS 592
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P +++ GL G D A K+ +S
Sbjct: 593 FKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 23/216 (10%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ G P + ++ G G +E A Q NKM+K+ PDL T N L+ +C G ++
Sbjct: 555 ESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLD 614
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
++++ + G D TY +I + K +EAF LL + E P Y I+
Sbjct: 615 KALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAIL 674
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGH-----------------------PPNRPVYTTLITM 159
G+ +A F S I +G PN ++ I
Sbjct: 675 SALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINE 734
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
G++ +A + + E T+ G+T + + +GL
Sbjct: 735 LCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGL 770
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 7/191 (3%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICK---SGEVEFCVEMYYSVCKLGSCADVSTYKI 85
A Q+ N+M + P+L T N+LI + + V ++ V KLG + +T+ I
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI + EA L+ + + P Y I+ ++G+ ++A ++K G
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD--- 202
PNR + L++ + G EAA + M + + P ++++ GL GK D
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337
Query: 203 -LAEKIEQLEV 212
L +++E L++
Sbjct: 338 RLKDEMENLKL 348
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V ++L+ G A + AKQ+ N+MI QG PD+ ++N+LI+ +C+ G
Sbjct: 176 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 235
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ ++ G+ D+ TY IL+ K G + +AFRL + P +Y
Sbjct: 236 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 295
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+I + +A FSE+ ++G PN
Sbjct: 296 LIDAMCKSRNLKEARKLFSELFVQGLQPN 324
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P + + L+QGL N A M+N+M+ P++ TF+ LI CK G
Sbjct: 71 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 130
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + ++ ++G +V TY L+ S + EA +L ++ G P Y
Sbjct: 131 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNI 190
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A F+E+ +G P+ Y TLI + GR EA + M G
Sbjct: 191 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 250
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
P + ++ DG C + LA+
Sbjct: 251 NLPDLCTYSILLDGF--CKQGYLAK 273
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G P V L+ G + A+++ + MI +G PD+ ++N LI CK+
Sbjct: 141 MTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ +Y LI + + G + EA L N++ +G+ P Y+
Sbjct: 201 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 260
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G AF F ++ PN +Y LI + EA E+ G
Sbjct: 261 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 320
Query: 181 LTPISRCFDL 190
L P + + L
Sbjct: 321 LQPNMKHWKL 330
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V ++ L + A + + M +G P++ T+NSLI+ +C
Sbjct: 36 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 95
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
M + L ++ T+ +LI K G + EA +L + E G P Y+
Sbjct: 96 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 155
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + +A F + KG P+ Y LI + R EA EM G
Sbjct: 156 LMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 215
Query: 181 LTPISRCFDLVTDGLKNCGK----HDL 203
LTP ++ + DGL G+ HDL
Sbjct: 216 LTPDIVSYNTLIDGLCQLGRLREAHDL 242
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M+ +G PD+ T+ ++I +CK GE ++ + + G DV TY +I ++ K
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
++EA + + G +P Y +I+G ++ +A +E+ PN ++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTP 183
LI + + G EA L MTEMG+ P
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEP 148
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L+ G + + A +V++M++ G PD TF +LI + +
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V + + + G ++ TY +++ + K G ID AF LL+ + ++ II
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ DDA F E++ KG PN Y++LI+ GR+ +A+ L +M E + P
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
F+ + D GK AEK+
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLH 278
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G L+QGL + G ++A+++ +M+ G PD+ T++ L++ +C +G+
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ + K D+ Y +I + KAG +D+ + L +L G P Y
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + +A+ ++K G P+ Y TLI R G +A + EM
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ L + G A Q+++ MI++ +P+L TFN+LI+ K G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + K D+ TY LI +D+A ++ +V P Y
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + +D F E+ +G + YTTLI G A +M G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ DGL N GK + A ++
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEV 417
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P L+ GL A +V++M+++G P+L T+ ++ +CK G+
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ADV + +I ++ K +D+A L + G P Y+
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G++ DA S++ K PN + LI + G+FVEA +M +
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P ++ + +G C HD +K +Q+
Sbjct: 286 IDPDIFTYNSLINGF--C-MHDRLDKAKQM 312
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K NP + + L+ + G A+++ + MIK+ DPD+ T+NSLI C
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+ + D+ TY LI K+ +++ L + G Y
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGG--RFVEAANYLMEMT 177
+I+G F G D+A F ++ G PP+ Y+ L+ +C G + +E +Y M+ +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY-MQKS 424
Query: 178 EMGL 181
E+ L
Sbjct: 425 EIKL 428
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 35/248 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++V GL G ++ A ++NKM + D+ FN++I+++CK
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G +V TY LI + G +A +LL +++E NP +
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 121 IIKGAFRRGQFDDA-------------------------FCF----------FSEIKIKG 145
+I + G+F +A FC F + K
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y TLI + R + EM+ GL + + + GL + G D A+
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 206 KIEQLEVS 213
K+ + VS
Sbjct: 381 KVFKQMVS 388
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%)
Query: 36 MIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
M+K P + FN L+ I K + + + + + +LG ++ TY ILI +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 96 IDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTT 155
I A LL +++ G+ P + ++ G + DA ++ G+ P+ +TT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 156 LITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
LI + EA + M + G P + +V +GL G DLA
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 65/161 (40%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAG 94
KM + G +L T+N LI C+ ++ + + + KLG + T L+
Sbjct: 35 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94
Query: 95 MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYT 154
I +A L+ +VE G+ P + +I G F + +A + +G PN Y
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 155 TLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ + G A N L +M + F+ + D L
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P V + ++ GL + L+ A ++ KM + G PD T+N+LI + G+
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
E+ + D ST L+ + G +D++F
Sbjct: 516 KAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 554
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++G AG +E + ++ ++ + G P++ + +LI+ CK GE+E ++++ + K
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKF 227
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP--IIKGAFRRGQFD 132
G A+ TY +LI + K G+ + F + + EDG FP+LY ++ + G+
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDG--VFPNLYTYNCVMNQHCKDGRTK 285
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
DAF F E++ +G N Y TLI R + EA + +M G+ P ++ +
Sbjct: 286 DAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLI 345
Query: 193 DGLKNCGK 200
DG GK
Sbjct: 346 DGFCGVGK 353
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +G +P + ++LV G G A ++V +M ++G P T+ LI+T +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDN 423
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + +LG DV TY +LI G ++EA RL +V P +Y
Sbjct: 424 MEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNT 483
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G A F E++ K PPN Y +I + + + EA + +M + G
Sbjct: 484 MVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTG 543
Query: 181 LTPISRCFDLVT 192
+ P +L++
Sbjct: 544 IDPSDSILNLIS 555
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL G + +M KM + G P+L T+N ++ CK G + +++ + +
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRER 297
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G ++ TY LI + + +EA +++ + DG NP Y +I G G+ A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
++K +G P+ Y L++ + G A + EM E G+ P + ++ D
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDT 417
Query: 195 LKNCGKHDLAEKIEQL 210
+ D EK QL
Sbjct: 418 F---ARMDNMEKAIQL 430
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + + L+ G G L A + + +G P L T+N L+ CK G+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGD 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G TY ILI ++ +++A +L + E G P Y+
Sbjct: 389 TSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSV 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +GQ ++A F + K PN+ +Y T++ + G A EM E
Sbjct: 449 LIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508
Query: 181 LTP 183
L P
Sbjct: 509 LPP 511
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 35/164 (21%)
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
Y+++I A ++ +D + + +V+ G P + + ++ F+ + FF+E K
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156
Query: 143 IK----------------------------------GHPPNRPVYTTLITMCGRGGRFVE 168
IK G PN +YTTLI C + G +
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216
Query: 169 AANYLMEMTEMGLTPISRCFDLVTDGL-KNCGKHDLAEKIEQLE 211
A + EM + GL + ++ GL KN K E E+++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ 260
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + L+ G G +E A + ++ +G P +ET+ ++I CK G+ +
Sbjct: 214 QGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKA 273
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G +V Y +I A K G I +A + ++E G P Y +I
Sbjct: 274 IDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLIS 333
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ R G+ +A + KG PN+ YT LI + G + A+N+L+EMTE G P
Sbjct: 334 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKP 393
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + GL G+ D+A I +
Sbjct: 394 DLVTYGALVHGLVVAGEVDVALTIRE 419
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G V+ + ++ G++ A + + MI+ G PD+ T+N+LI C+ G+
Sbjct: 281 MNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGK 340
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ G + +Y LI A K G D A L + E GH P Y
Sbjct: 341 VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGA 400
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D A ++ +G P+ +Y L++ + + A L EM +
Sbjct: 401 LVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS 460
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P + + + DG G D A K+ +L +
Sbjct: 461 VLPDAFVYATLVDGFIRNGNLDEARKLFELTI 492
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P V ++ G G ++ +++ +M +G +++ +N++I+ K G +
Sbjct: 249 KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK 308
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
VE + + G D+ TY LI + G + EA +LL + G P Y P+I
Sbjct: 309 AVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 368
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++G +D A + E+ +GH P+ Y L+ G A +M E G+ P
Sbjct: 369 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 428
Query: 184 ISRCFDLVTDGLKNCGKHDL 203
+ ++++ GL C K L
Sbjct: 429 DAGIYNILMSGL--CKKFKL 446
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G + A + +M ++G PDL T+ +L+ + +GEV+
Sbjct: 354 KGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDV 413
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G D Y IL+ + K + A LL +++ P +YA ++
Sbjct: 414 ALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVD 473
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G D+A F KG P Y +I + G +A + M + L P
Sbjct: 474 GFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAP 533
Query: 184 ISRCFDLVTDGLKNCGKHDL 203
+ V DG +HDL
Sbjct: 534 DEFTYSTVIDGY--VKQHDL 551
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G G + A Q++ + + +G P+ ++ LI CK G
Sbjct: 316 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 375
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D+ TY L+ + AG +D A + ++E G P +Y
Sbjct: 376 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 435
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++ + A +E+ + P+ VY TL+ R G EA E G
Sbjct: 436 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 495
Query: 181 LTP 183
+ P
Sbjct: 496 MNP 498
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD-PDLETFNSLIETICKSG 59
M + +P +++Q ++G +E A ++ ++K + PD+ NSL+ + K G
Sbjct: 120 MRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLG 179
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+E + + +C I++ + K G ++E +L+ + G P Y
Sbjct: 180 RIE--------IARKFTC-------IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYN 224
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G ++G + A F E+K+KG P Y +I + G F LMEM
Sbjct: 225 TLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 284
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
GLT + ++ + D G + + +E +E
Sbjct: 285 GLTVNVQVYNTIIDARYKHGH--IVKAVETIE 314
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 41/72 (56%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+KG NP + G + +++G G ++ A +N+M K+ PD T++++I+ K +++
Sbjct: 493 EKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLD 552
Query: 63 FCVEMYYSVCKL 74
+M+ + K+
Sbjct: 553 GAQKMFREMVKM 564
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P LV G + G L+ A+++ I++G +P + +N++I+ CK G
Sbjct: 456 MLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGM 515
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 108
++ + + K D TY +I K +D A ++ +V+
Sbjct: 516 MKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVK 563
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P + L+ G + + A +V++M++ G PD TF +LI + +
Sbjct: 74 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 133
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V + + + G ++ TY +++ + K G ID AF LL+ + ++ II
Sbjct: 134 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 193
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ DDA F E++ KG PN Y++LI+ GR+ +A+ L +M E + P
Sbjct: 194 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 253
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
F+ + D GK AEK+
Sbjct: 254 LVTFNALIDAFVKEGKFVEAEKLHD 278
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS +G L+QGL + G ++A+++ +M+ G PD+ T++ L++ +C +G+
Sbjct: 350 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +E++ + K D+ Y +I + KAG +D+ + L +L G P Y
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+I G + +A+ ++K G P+ Y TLI R G +A + EM
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ L + G A Q+++ MI++ +P+L TFN+LI+ K G+
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 269
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+++ + K D+ TY LI +D+A ++ +V P Y
Sbjct: 270 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 329
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG + + +D F E+ +G + YTTLI G A +M G
Sbjct: 330 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ DGL N GK + A ++
Sbjct: 390 VPPDIMTYSILLDGLCNNGKLEKALEV 416
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G+ P L+ GL A +V++M+++G P+L T+ ++ +CK G+
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 164
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ADV + +I ++ K +D+A L + G P Y+
Sbjct: 165 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 224
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G++ DA S++ K PN + LI + G+FVEA +M +
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P ++ + +G C HD +K +Q+
Sbjct: 285 IDPDIFTYNSLINGF--C-MHDRLDKAKQM 311
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K NP + + L+ + G A+++ + MIK+ DPD+ T+NSLI C
Sbjct: 245 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 304
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +M+ + D+ TY LI K+ +++ L + G Y
Sbjct: 305 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGG--RFVEAANYLMEMT 177
+I+G F G D+A F ++ G PP+ Y+ L+ +C G + +E +Y M+ +
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY-MQKS 423
Query: 178 EMGL 181
E+ L
Sbjct: 424 EIKL 427
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 35/248 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++V GL G ++ A ++NKM + D+ FN++I+++CK
Sbjct: 140 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 199
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + G +V TY LI + G +A +LL +++E NP +
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259
Query: 121 IIKGAFRRGQFDDA-------------------------FCF----------FSEIKIKG 145
+I + G+F +A FC F + K
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y TLI + R + EM+ GL + + + GL + G D A+
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 379
Query: 206 KIEQLEVS 213
K+ + VS
Sbjct: 380 KVFKQMVS 387
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 4/189 (2%)
Query: 11 RGRDLLVQGLLNAG--YLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
R RD L G+ L+ A + M+K P + FN L+ I K + + + +
Sbjct: 6 RRRDCLFVGISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLA 65
Query: 69 Y--SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ KLG + T L+ I +A L+ +VE G+ P + +I G F
Sbjct: 66 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ +A + +G PN Y ++ + G A N L +M +
Sbjct: 126 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 185
Query: 187 CFDLVTDGL 195
F+ + D L
Sbjct: 186 IFNTIIDSL 194
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P V + ++ GL + L+ A ++ KM + G PD T+N+LI + G+
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 514
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
E+ + D ST L+ + G +D++F
Sbjct: 515 KAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 553
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + + L+ G G +E A + ++ +G P +ET+ ++I CK G+ +
Sbjct: 233 QGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKA 292
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + G +V Y +I A K G I +A + ++E G P Y +I
Sbjct: 293 IDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLIS 352
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ R G+ +A + KG PN+ YT LI + G + A+N+L+EMTE G P
Sbjct: 353 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKP 412
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + GL G+ D+A I +
Sbjct: 413 DLVTYGALVHGLVVAGEVDVALTIRE 438
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ +G V+ + ++ G++ A + + MI+ G PD+ T+N+LI C+ G+
Sbjct: 300 MNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGK 359
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ G + +Y LI A K G D A L + E GH P Y
Sbjct: 360 VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGA 419
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D A ++ +G P+ +Y L++ + + A L EM +
Sbjct: 420 LVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS 479
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P + + + DG G D A K+ +L +
Sbjct: 480 VLPDAFVYATLVDGFIRNGNLDEARKLFELTI 511
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KGF P V ++ G G ++ +++ +M +G +++ +N++I+ K G +
Sbjct: 268 KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK 327
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
VE + + G D+ TY LI + G + EA +LL + G P Y P+I
Sbjct: 328 AVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 387
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++G +D A + E+ +GH P+ Y L+ G A +M E G+ P
Sbjct: 388 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 447
Query: 184 ISRCFDLVTDGLKNCGKHDL 203
+ ++++ GL C K L
Sbjct: 448 DAGIYNILMSGL--CKKFKL 465
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P LV G + G L+ A+++ I++G +P + +N++I+ CK G
Sbjct: 475 MLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGM 534
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K D TY +I K +D A ++ +V+ P Y
Sbjct: 535 MKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTS 594
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R+G + F E++ G PN Y+ LI + + ++AA++ EM
Sbjct: 595 LINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNK 654
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P F+ + +G G ++EK + + + +S+
Sbjct: 655 CVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSM 691
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD-PDLETFNSLIETICKSGEVEFCV 65
+P +++Q ++G +E A ++ ++K + PD+ NSL+ + K G +E
Sbjct: 126 SPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIAR 185
Query: 66 EMYYSVCKLGS----CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
++Y + ++ C D + I++ + K G ++E +L+ + G P Y +
Sbjct: 186 KLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTL 245
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
I G ++G + A F E+K+KG P Y +I + G F LMEM GL
Sbjct: 246 IDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGL 305
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
T + ++ + D G + + +E +E
Sbjct: 306 TVNVQVYNTIIDARYKHGH--IVKAVETIE 333
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G + A + +M ++G PDL T+ +L+ + +GEV+
Sbjct: 373 KGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDV 432
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G D Y IL+ + K + A LL +++ P +YA ++
Sbjct: 433 ALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVD 492
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G D+A F KG P Y +I + G +A + M + L P
Sbjct: 493 GFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAP 552
Query: 184 ISRCFDLVTDGLKNCGKHDL 203
+ V DG +HDL
Sbjct: 553 DEFTYSTVIDGY--VKQHDL 570
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 84/218 (38%), Gaps = 35/218 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P + LV GL+ AG ++ A + KM+++G PD +N L+ +CK +
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFK 464
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + D Y L+ + G +DEA +L +E G NP Y
Sbjct: 465 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 524
Query: 121 IIKGAFRRGQFDDAFCFFSEIK------------------IKGH---------------- 146
+IKG + G DA + +K +K H
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584
Query: 147 -PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
PN YT+LI R G + EM GL P
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVP 622
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G G + A Q++ + + +G P+ ++ LI CK G
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 394
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D+ TY L+ + AG +D A + ++E G P +Y
Sbjct: 395 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++ + A +E+ + P+ VY TL+ R G EA E G
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514
Query: 181 LTP 183
+ P
Sbjct: 515 MNP 517
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 23/240 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P ++ G + L+ A++M +M+K P++ T+ SLI C+ G+
Sbjct: 545 MKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGD 604
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + G +V TY ILI + K + +A ++ + P +
Sbjct: 605 LHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNY 664
Query: 121 IIKGAFRRG---------QFDDA-----FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
++ G + G +F + FF + G P Y +++ + G F
Sbjct: 665 LVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMF 724
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGL---------KNCGKHDLAEKIEQLEVSLRSV 217
A +MT G P S F + G+ KN +L E+ Q+ V+ S+
Sbjct: 725 RTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSI 784
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP V ++LV L G ++ AK ++ M+K PD+ T+++L++ E
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ ++ +G DV TY ILI K M+DEA L + + P Y+
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ + E++ +G P + Y++LI + G A +M +
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P F ++ DGL G+ A+++ Q
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V +L+ G ++ A + +M ++ P + T++SLI+ +CKSG
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + G ADV TY LI + K G +D A L + + + P +
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ DA F ++ KG+ N Y +I + G EA L +M + G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + F+ + L ++D AEK+
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKL 536
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + ++L+ + G + ++ K++K+G PD T N+LI+ +C G+V+
Sbjct: 88 KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + G + +Y LI V K G A +LL + P +Y+ II
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 207
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +A+ FSE+ +KG + Y+TLI G+ EA L EM + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++++ D L C + + E L V L++
Sbjct: 268 NVYTYNILVDAL--CKEGKVKEAKSVLAVMLKA 298
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 87/181 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + L+ GL +G + ++++M +G D+ T++SLI+ +CK+G
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH 424
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + ++ T+ IL+ + K G + +A + +L+ G++ Y
Sbjct: 425 LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G ++A S+++ G PN + T+I + +A L +M G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544
Query: 181 L 181
L
Sbjct: 545 L 545
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G ++ A+ + N M G PD+ T+ LI CK+ V+ + +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + + TY LI + K+G I + L+ + + G Y+ +I G +
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCK 421
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G D A F+++K + PN +T L+ +GGR +A ++ G
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLE 211
++++ +G +C + L E + L
Sbjct: 482 YNVMING--HCKQGLLEEALTMLS 503
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 87/191 (45%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ P + L++GL G ++ A +K++ QG + ++ +LI +CK G+
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 182
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + +V Y +I A+ K ++ EA+ L + G + Y+ +I
Sbjct: 183 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G G+ +A +E+ +K PN Y L+ + G+ EA + L M + + P
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 184 ISRCFDLVTDG 194
+ + DG
Sbjct: 303 DVITYSTLMDG 313
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 3/211 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ + ++ + +A + +++ +G PDL T N LI C G++ F +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G D T LI + G + +A L+ G YA +I G +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G A +I + PN +Y+T+I + EA EMT G++
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL-EVSLRSV 217
+ + G C + L E I L E+ L+++
Sbjct: 237 YSTLIYGF--CIEGKLKEAIGLLNEMVLKTI 265
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++ L + A + ++M +G D+ T+++LI C G+++ + +
Sbjct: 197 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ +V TY IL+ A+ K G + EA +L +++ P Y+ ++ G F
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ A F+ + + G P+ YT LI + EA N EM + + P
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 188 FDLVTDGLKNCGK 200
+ + DGL G+
Sbjct: 377 YSSLIDGLCKSGR 389
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A N+M+ P + FN ++++ K V + + + G D+ T I
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI G I F +L +++ G+ P +IKG +GQ A F ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
N+ Y TLI + G A L ++ P + + D L
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 209
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ GL G LE A + ++M ++G P T+ LI+ +C G ++ ++ +
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIAR 330
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G +V TY +LI + + G I+EA + +V+DG P Y +I G + G+ A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPA 390
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F + ++ + PN + L+ R G+ +A + L M + GL+P ++++ DG
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 195 LKNCGKHDLAEKI 207
L G ++A K+
Sbjct: 451 LCREGHMNVAYKL 463
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P R +L++ L + G ++ A + ++MI +G P++ T+ LI+ +C+ G+
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGK 351
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + K G V TY LI K G + AF LL + + P +
Sbjct: 352 IEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ A + G P+ Y LI R G A L M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD 471
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
L P F + + GK D+A
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVA 495
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V +L+ GL G +E A + KM+K G P + T+N+LI CK G
Sbjct: 327 MIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGR 386
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+ + K +V T+ L+ + + G +A LL ++++G +P Y
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G + A+ + + P+ +T +I + G+ A+ +L M G
Sbjct: 447 LIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
++ + DG+ N GK A I + V +R
Sbjct: 507 ISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMR 541
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+ G L A ++ + M ++G+ P+ +++ LI +C+ G +E + + +
Sbjct: 236 LLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G TY +LI A+ G+ID+AF L ++ G P Y +I G R G+ ++A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
++ G P+ Y LI + GR V A L M + P R F+ + +G
Sbjct: 356 NGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 195 LKNCGK 200
L GK
Sbjct: 416 LCRVGK 421
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 2/206 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G G + A +++ M K+ P++ TFN L+E +C+ G+
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G D+ +Y +LI + + G ++ A++LL ++ P +
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTA 481
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II ++G+ D A F + KG + TTLI G+ +A L + +M
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMR 541
Query: 181 LTPISRCFDLVTDGL-KNCG-KHDLA 204
+ +++ D L K C K +LA
Sbjct: 542 MLTTPHSLNVILDMLSKGCKLKEELA 567
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 7/203 (3%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G+ N G A ++ ++K + N +++ + K +++ + M + KLG
Sbjct: 517 LIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLG 576
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V TY L+ + ++G I +FR+L + G P Y II G + G+ ++A
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG-------LTPISRCF 188
S ++ G PN YT ++ G+ A + M E G + + R F
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGF 696
Query: 189 DLVTDGLKNCGKHDLAEKIEQLE 211
L G++ + E I +E
Sbjct: 697 VLSQKGIRETDPECIKELISVVE 719
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V LV GL+ +G + + +M+ M G P++ + +I +C+ G VE
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ ++ G + TY +++ G +D A + +VE G+ +Y+ +++G
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRG 695
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 5/204 (2%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
N P L+ L+ G+L A +M G + + +++ +CK+G E
Sbjct: 158 LNYPCYSSLLMSLAKLDLGFL--AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE 215
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKG 124
+ K+G D L+ + + +A ++ + +G P Y+ +I G
Sbjct: 216 MFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHG 275
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ ++AF ++ KG P+ YT LI +C R G +A N EM G P
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR-GLIDKAFNLFDEMIARGCKP 334
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ DGL GK + A +
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGV 358
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R + L+ L +G + ++ N MI G P + T+N +I+ +CK G++E +
Sbjct: 252 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 311
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + ++G DV TY LI K G ++E L + + + G P Y +I +
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ AF +FSE+K G PN Y+TLI + G A ++M GL P
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ + D NC +L E + L L++
Sbjct: 432 YTSLIDA--NCKAGNLTEAWKLLNDMLQA 458
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++++ L G LE+++++ +M + G PD+ T+NSLI+ K G
Sbjct: 280 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + +G D+ TY LI K + AF + +G P Y+
Sbjct: 340 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G A F +++ G PN YT+LI + G EA L +M + G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + DGL G+ AE++
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEV 486
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G +P V + L+ G G LE + N+M G PD+ T+N LI CK +
Sbjct: 315 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 374
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + + G +V TY LI A K GM+ A +L ++ G P Y
Sbjct: 375 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTS 434
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +A+ +++ G N YT L+ + GR +EA M + G
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
++P + + + G + + A KI
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKI 521
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 94/189 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ AG L A +++N M++ G ++ T+ +L++ +CK+G + E++ S+ K G
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ Y L+ KA +++A ++L + E P LY II G + + ++
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 554
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+K +G N + TT+I + G+ +A N+ EM ++G+ + ++ DGL
Sbjct: 555 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 614
Query: 196 KNCGKHDLA 204
G +LA
Sbjct: 615 CKAGIVELA 623
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + + L+ + A + ++M G P++ T+++LI+ CK G
Sbjct: 350 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + + G + TY LI A KAG + EA++LL+++++ G Y
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ +A F + G PN+ VYT L+ + R +A L +MTE
Sbjct: 470 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529
Query: 181 LTPISRCFDLVTDG---LKNCGKHDLAEKIEQLE 211
+ P DL+ G +C + L E LE
Sbjct: 530 IKP-----DLILYGSIIWGHCSQRKLEETKLILE 558
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G + +L+ GL AG +E A +M+ G P++ + SLI+ +CK+
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + G D++ + LI K G + EA L+ + E +Y
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ A FF+E+ KG P + L+ + G+ EA EM MG
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774
Query: 181 L 181
L
Sbjct: 775 L 775
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 14 DLLVQGLLNAGY-----LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMY 68
DL++ G + G+ LE K ++ +M +G + ++I+ K+G+ + +
Sbjct: 533 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 592
Query: 69 YSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRR 128
+ +G A + TY +LI + KAG+++ A ++ G P ++Y +I G +
Sbjct: 593 QEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKN 652
Query: 129 GQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCF 188
+ A F E++ +G P+ +T LI + G EA + MTE+ + +
Sbjct: 653 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 712
Query: 189 DLVTDGLKNCGKHDLAEK 206
+ G CG+ A K
Sbjct: 713 TSLVSGFSQCGELHQARK 730
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D+L + G LE A + ++M + P + N L+ + KSG + + + +
Sbjct: 223 DVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIG 282
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G V TY ++I + K G ++ + RL + E G +P Y +I G + G ++
Sbjct: 283 AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEE 342
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
F+E+K G P+ Y LI + + A Y EM GL P + + D
Sbjct: 343 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 402
Query: 194 GL 195
Sbjct: 403 AF 404
>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
Length = 594
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ L G+ + +++ M P + T N LI +CK+G ++
Sbjct: 342 GMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSA 401
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + D+ TY L+ A+ K GM+DEAF+LLH L + +P Y ++ G
Sbjct: 402 INFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDG 461
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R+G D A +S++ G P+ + ++I R +FVEA L + + G
Sbjct: 462 LSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVN 521
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
S + ++ L K DLA I+ LE+ L S
Sbjct: 522 SSFYRILVHELCLNKKVDLA--IQVLEMMLSS 551
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++G +N ++ A Q++ M+ G PD+ T+N +I +CK G +E +E+ + G
Sbjct: 178 MIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSG 237
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +I + G D+A + G P+ Y +I+ ++ A
Sbjct: 238 CPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCAL 297
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ +G P+ Y +LI + + G+F +AA + + G+ P + ++ + L
Sbjct: 298 EVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSL 357
Query: 196 KNCGKHDLAEKIEQ-LEVSLR 215
G D ++I + + +SL+
Sbjct: 358 SRRGHWDEVDEILKIMSISLQ 378
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++++ L G+LESA +++N M G PD+ T+N++I + +G + VE
Sbjct: 205 PDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEF 264
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G+ + TY ILI V K A +L + +G P Y +I +
Sbjct: 265 WKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCK 324
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G+F+DA + G P+ Y TL+ R G + E L M+ P
Sbjct: 325 QGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVT 384
Query: 188 FDLVTDGLKNCGKHDLA 204
+++ +GL G D A
Sbjct: 385 CNVLINGLCKNGLLDSA 401
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++Q G L A ++V+ M + PD E ++I + ++ V++ +
Sbjct: 141 NVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVM 200
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ TY ++I + K G ++ A LL+++ G P Y +I+ F G FD
Sbjct: 201 SGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQ 260
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A F+ E KG PP YT LI + + V A L EM G P DLVT
Sbjct: 261 AVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYP-----DLVT 314
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V + +++ + + G + A + + +++G+ P L T+ LIE + K
Sbjct: 233 MSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRG 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + G D+ TY LI K G ++A ++ NL+ G P Y
Sbjct: 293 TVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNT 352
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ RRG +D+ + I PP LI + G A N+L +M
Sbjct: 353 LLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYN 412
Query: 181 LTP 183
P
Sbjct: 413 CLP 415
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++D +P + + ++ GL GY++ A + ++M++ G PD T S+I C+S +
Sbjct: 443 LTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNK 502
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + K G + S Y+IL+ + +D A ++L ++ ++Y+
Sbjct: 503 FVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYST 562
Query: 121 IIKGAFRRGQFDDA 134
II G + A
Sbjct: 563 IINSIASAGLKEQA 576
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V + L GL +E AK++++ M + G + + ++ +LI K G+
Sbjct: 334 MERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGD 393
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + GS V TY ++I K+G I EA R + + G P YA
Sbjct: 394 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAA 453
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D A F E+K +G PN YT LI+ + GR EA + M G
Sbjct: 454 LVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAG 513
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
LTP + ++ L + D
Sbjct: 514 LTPDDTLYSMLVGSLHTDKRKD 535
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P R L+ G G +E+A+ ++ M +G + FN++I+ C+ G V+
Sbjct: 268 GIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKA 327
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E+ + ++G DV TY L + + +++A +LLH + E+G Y +I
Sbjct: 328 LEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISI 387
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G +A F +++ KG P+ Y +I + G EA + EM + GL P
Sbjct: 388 HSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPD 447
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
+ + G GK D+A ++
Sbjct: 448 VYTYAALVHGHCVNGKVDVALRL 470
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%)
Query: 31 QMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
+++ +M G +P + T+ L++ + +G++ ++ + + DV Y +I A
Sbjct: 189 EVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAY 248
Query: 91 SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNR 150
+AG + A + V +G P Y +I G + GQ + A ++++++G N+
Sbjct: 249 CRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQ 308
Query: 151 PVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
++ T+I R G +A M MG+ ++ + GL + + A+K+
Sbjct: 309 IIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKL 365
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 4/183 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +LV GL AG + + + +++ ++ D+ ++++I C++G
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN--LVEDGHNPFPSLY 118
V E++ G + TY LI K G I+ A LL + L GHN ++
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQI--IF 311
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G R G D A + ++ G + Y TL R R +A L MTE
Sbjct: 312 NTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371
Query: 179 MGL 181
G+
Sbjct: 372 NGV 374
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++V G AG ++ A++++++M + G + +N L++T + E+ +
Sbjct: 138 VVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESG 197
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V TY IL+ +S AG I + + + Y+ +I R G A
Sbjct: 198 GVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRA 257
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E G PN Y LI + G+ A L +M G+ F+ + DG
Sbjct: 258 SEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDG 317
Query: 195 LKNCGKHDLAEKIEQL 210
G D A +I+ +
Sbjct: 318 YCRHGMVDKALEIKAV 333
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 63/167 (37%), Gaps = 1/167 (0%)
Query: 51 LIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
+++ CK+G ++ + + + G + Y L+ ++ +L + G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 111 HNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAA 170
P Y ++ G G F EIK K + Y+ +I R G A+
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
E G+ P R + + +G G+ + AE + ++ LR V
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEML-LTDMQLRGV 304
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 4/200 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G AG ++ AK++ ++M+K+G P++ T+N+LI+ +CK VE V ++ + + G
Sbjct: 284 VIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREG 343
Query: 76 SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
C +V TY ++I + G ++ A + + E G Y +I+ G+ + A
Sbjct: 344 VCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKA 403
Query: 135 FCFFSEIKIKGHPPNRPVYTTLIT---MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
F ++ PN Y LI+ + + V A LM+M + G P F+ V
Sbjct: 404 LEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRV 463
Query: 192 TDGLKNCGKHDLAEKIEQLE 211
+GL G D A++I +++
Sbjct: 464 LNGLVITGNQDFAKEILRMQ 483
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 1/183 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + +L + + G A + M + G DL +FN+L++ +CKS
Sbjct: 130 MRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKR 189
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE + ++ D TY IL A R+L +V+ G P Y
Sbjct: 190 VETAHSLLKTLTSRFR-PDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNT 248
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG FR Q +A+ F+ E+K + + YTT+I G G +A EM + G
Sbjct: 249 MLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEG 308
Query: 181 LTP 183
+ P
Sbjct: 309 VVP 311
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P ++L G A +++ +M+++G +P + T+N++++ +S +++
Sbjct: 204 FRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAW 263
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E Y + K DV TY +I AG + +A R+ H +V++G P + Y +I+
Sbjct: 264 EFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVL 323
Query: 126 FRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++ ++A F E+ +G PN Y +I G A ++ M E GL
Sbjct: 324 CKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRAC 383
Query: 185 SRCFDLV 191
+ +++V
Sbjct: 384 VQTYNVV 390
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++++GL + G +E A + +M + G ++T+N +I C +GEVE +E+
Sbjct: 347 PNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEV 406
Query: 68 YYSVCKLGSC-ADVSTYKILIPAV---SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + GSC ++ TY +LI A+ K+ + A +LL ++V+ G P + ++
Sbjct: 407 FGKMGD-GSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLN 465
Query: 124 GAFRRGQFDDA 134
G G D A
Sbjct: 466 GLVITGNQDFA 476
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+QG G L AK+++++++ G D+ F S+I +CK G
Sbjct: 457 MIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGR 516
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ +G D Y +L+ G +++A R+ +V G P Y
Sbjct: 517 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F E+ KG P+ +Y +I GR V A EMTE G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636
Query: 181 LTPISRCFDLVTDGL 195
+ + +V GL
Sbjct: 637 IAMNKCTYSIVLRGL 651
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++ L G ++ A + N+MI QG PD ++ LI+ C G
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D+ + +I + K G + +A + V G +P +Y
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F + G PN Y TL+ + GR E + EM + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++++ DGL G+
Sbjct: 602 IKPSTILYNIIIDGLFEAGR 621
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ G + G + A ++ +M +Q PD+ N+L+ ++CK G+
Sbjct: 282 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ ++ G DV +Y I++ + G + + L ++ DG P +
Sbjct: 342 IKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK G D A F+E++ G P+ Y T+I R G+ +A +M + G
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461
Query: 181 LTPISRCFDLVTDGL 195
+ P + + G
Sbjct: 462 VVPDKYAYHCLIQGF 476
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP V +++ G G L + + M+ G P + TFN LI+ G
Sbjct: 352 MAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGM 411
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G V TY +I A+ + G +D+A + +++ G P Y
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A SEI G + + ++I + GR ++A N +G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + ++++ DG GK + A ++ VS
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++L+ G G +E A ++ + M+ G +P++ + +L+ CK G ++
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G Y I+I + +AG A H + E G Y+ +++G
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 650
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ FD+A F E++ + T+I + R EA + ++ GL P
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ + ++ + N K L E+ E + S+++
Sbjct: 711 AVTYSIM---ITNLIKEGLVEEAEDMFSSMQN 739
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKSGEVE 62
G P V ++L++ L N G A ++ M + G+ PD+ +N++I+ K G+V
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVN 238
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+++ + + G D+ TY ++ A+ KA +D+A L +V G P Y +I
Sbjct: 239 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLI 298
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G GQ+ +A F E++ + P+ TL+ + G+ EA + M G
Sbjct: 299 YGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 183 PISRCFDLVTDGLKNCG 199
P + ++ +G G
Sbjct: 359 PDVFSYTIMLNGYATKG 375
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 96/214 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V + L+ L G ++ A+ + + M +G +PD+ ++ ++ G
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G + T+ +LI A + GM+D+A + + + + G P Y
Sbjct: 377 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ DDA F+++ +G P++ Y LI G ++A + E+ G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ F + + L G+ A+ I L V++
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L G + A+ + + + G PD +N L++ C G++E + ++ ++ G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V Y L+ K G IDE L +++ G P LY II G F G+ A
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
F E+ G N+ Y+ ++ + F EA E+ M +
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCKLGSCADVSTYKI 85
E A ++++ G D + L++ C++ + ++ + + +LG DV +Y I
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI 189
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ ++ G +A LL + E G P + Y +I G F+ G + A F E+
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PP+ Y++++ + +A +L +M G+ P + ++ + G + G+
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309
Query: 204 AEKI 207
A ++
Sbjct: 310 AVRV 313
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 78/195 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V G LV G G ++ + +M+++G P +N +I+ + ++G
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + TY I++ + K DEA L L
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ + ++A F+ I G P Y+ +IT + G EA + M G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 741
Query: 181 LTPISRCFDLVTDGL 195
P SR + V L
Sbjct: 742 CEPDSRLLNHVVREL 756
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 60/127 (47%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++GL + A + ++ D+ T N++I + ++ VE +++ S+ +
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G TY I+I + K G+++EA + ++ G P L +++ ++ + A
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765
Query: 135 FCFFSEI 141
+ S+I
Sbjct: 766 GAYLSKI 772
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV GL A L A+QM+ +M ++G PD+ T+NSLI+ +CKS +E ++ ++ K
Sbjct: 177 NILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVK 236
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
++ TY LI K G A +L+ +++ G +P + +I G ++ + D
Sbjct: 237 RKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDK 296
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
A +K PN Y LI+ GR EA L EM G+ P
Sbjct: 297 ACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP 346
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + ++L+ GL +AG A +++++M +G PD+ T+NSLI C++ ++E ++
Sbjct: 311 PNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQI 370
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G D +Y L A+ K+ DEAF LL N+ + G P + +++G
Sbjct: 371 QNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCC 430
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ D+A + ++ G P Y L+T + GR +A L+ M G+ P+
Sbjct: 431 SRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSS 490
Query: 188 FDLVTDGLKNCGKHDLA 204
+ L GK DLA
Sbjct: 491 SGTIVHTLAREGKQDLA 507
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS++G P V + L+ GL + +E A+Q++ M+K+ P+L T+N+LI CK+G
Sbjct: 199 MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGC 258
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G+ DV T+ LI + ID+A +LH + + P Y
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNV 318
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ ++A SE+ +G P+ Y +LI + R + +A M E G
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 181 LTP--ISRC 187
+ P IS C
Sbjct: 379 VIPDGISYC 387
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 8/218 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ G G A Q++ +MI+ G+ PD+ TFNSLI C+ +
Sbjct: 234 MVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSK 293
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL-- 117
++ E+ + + K G CA ++ TY +LI + AG +EA LL + DG P +
Sbjct: 294 IDKACEVLH-LMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM--DGRGILPDIIT 350
Query: 118 YAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
Y +I R Q + AF + + +G P+ Y TL + RF EA L M
Sbjct: 351 YNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMF 410
Query: 178 EMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
+ G P F+ + +GL C L E L V R
Sbjct: 411 DAGAIPNLFTFNSLMEGL--CCSRRLDEARHLLAVMRR 446
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V + L+ G ++ A ++++ M K P+L T+N LI +C +G
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGR 328
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + G D+ TY LI + I++AF++ + +VE G P Y
Sbjct: 329 ANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCT 388
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ + +FD+AF + G PN + +L+ R EA + L M +G
Sbjct: 389 LAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVG 448
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
P + ++++ GL G+ D A+++ + VS
Sbjct: 449 CDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVS 481
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P L LL + + A +++ M G+ P+L TFNSL+E +C S
Sbjct: 374 MVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRR 433
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + ++G STY++L+ + KAG +D+A +L +V +G P S
Sbjct: 434 LDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGT 493
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
I+ R G+ D A +F ++ P Y L+
Sbjct: 494 IVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLL 530
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P V +VQ L N G L A Q + ++ PD FN L+ +CK+ +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQ 188
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + + G DV TY LI + K+ ++EA +LL +V+ P Y
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G A + G P+ + +LI+ + + +A L M +
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P ++++ GL + G+ + A
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEA 332
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 16 LVQGLLNAGYLESAKQMV-NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L++ L+ A A Q+ ++++ Q D + T+N+LI CK+G++E ++ + +
Sbjct: 75 LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G DV T+ ++ A+ G + A + VE P L+ ++ G + Q +A
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEA 192
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
E+ +G P+ Y +LI + R EA L M + + P ++ + G
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252
Query: 195 LKNCG----KHDLAEKIEQ 209
G H L E++ Q
Sbjct: 253 YCKTGCTGLAHQLIERMIQ 271
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G P L+QG G L AK+++++++ G D+ F S+I +CK G
Sbjct: 457 MIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGR 516
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++ +G D Y +L+ G +++A R+ +V G P Y
Sbjct: 517 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G+ D+ F E+ KG P+ +Y +I GR V A EMTE G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636
Query: 181 LTPISRCFDLVTDGL 195
+ + +V GL
Sbjct: 637 IAMNKCTYSIVLRGL 651
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++ L G ++ A + N+MI QG PD ++ LI+ C G
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+ + G D+ + +I + K G + +A + V G +P +Y
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + A F + G PN Y TL+ + GR E + EM + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + ++++ DGL G+
Sbjct: 602 IKPSTILYNIIIDGLFEAGR 621
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG NP V +++ G G L + + M+ G PD+ TFN LI+ G
Sbjct: 352 MAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 411
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + G V TY +I A+ + G +D+A + +++ G P Y
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+G G A SEI G + + ++I + GR ++A N +G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L P + ++++ DG GK + A ++ VS
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG P + L+ G + G + A ++ +M +Q PD+ N+L+ ++CK G+
Sbjct: 282 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ ++ G DV +Y I++ + G + + L ++ DG P +
Sbjct: 342 IKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IK G D A F+E++ G P+ Y T+I R G+ +A +M + G
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461
Query: 181 LTPISRCFDLVTDGL 195
+ P + + G
Sbjct: 462 VVPDKYAYHCLIQGF 476
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P ++L+ G G +E A ++ + M+ G +P++ + +L+ CK G ++
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ + + G Y I+I + +AG A H + E G Y+ +++G
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 650
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F+ FD+A F E++ + T+I + R EA + ++ GL P
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ + ++ + N K L E+ E + S+++
Sbjct: 711 AVTYSIM---ITNLLKEGLVEEAEDMFSSMQN 739
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS--DPDLETFNSLIETICKSGEVE 62
G P V ++L++ L N G A ++ M + G+ PD+ +N++I+ K G+V
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVN 238
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+++ + + G D+ TY ++ A+ KA +D+A L +V G P Y +I
Sbjct: 239 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLI 298
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G GQ+ +A F E++ + P+ TL+ + G+ EA + M G
Sbjct: 299 YGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 183 PISRCFDLVTDGLKNCG 199
P + ++ +G G
Sbjct: 359 PDVFSYTIMLNGYATKG 375
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V + L+ L G ++ A+ + + M +G +PD+ ++ ++ G
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + G D+ T+ +LI A + GM+D+A + + + + G P Y
Sbjct: 377 LVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I R G+ DDA F+++ +G P++ Y LI G ++A + E+ G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ F + + L G+ A+ I L V++
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L G + A+ + + + G PD +N L++ C G++E + ++ ++ G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V Y L+ K G IDE L +++ G P LY II G F G+ A
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
F E+ G N+ Y+ ++ + F EA E+ M +
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE-MYYSVCKLGSCADVSTYKI 85
E A ++++ G D + L++ C++ + ++ + + +LG DV +Y I
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI 189
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSEIKI 143
L+ ++ G +A LL + E G P + Y +I G F+ G + A F E+
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+G PP+ Y++++ + +A +L +M G+ P + ++ + G + G+
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309
Query: 204 AEKI 207
A ++
Sbjct: 310 AVRV 313
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 78/195 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V G LV G G ++ + +M+++G P +N +I+ + ++G
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + TY I++ + K DEA L L
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ + ++A F+ I G P Y+ +IT + G EA + M G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741
Query: 181 LTPISRCFDLVTDGL 195
P SR + V L
Sbjct: 742 CEPDSRLLNHVVREL 756
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 60/127 (47%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
++++GL + A + ++ D+ T N++I + ++ VE +++ S+ +
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G TY I+I + K G+++EA + ++ G P L +++ ++ + A
Sbjct: 706 GLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765
Query: 135 FCFFSEI 141
+ S+I
Sbjct: 766 GAYLSKI 772
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+NP +L+ GL G + A +M ++M ++G P+ + ++ +C++ +
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G C D T L+ K G IDEAF LL ++G+ Y+ +I G
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
FR ++D+ + ++ G P+ +YT LI G A N L +MT+ GL+P
Sbjct: 316 LFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD 375
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
+ C++ + G + G D A + QLE+S
Sbjct: 376 TYCYNALIKGFCDVGLLDKARSL-QLEIS 403
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 96/246 (39%), Gaps = 43/246 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ KG P +++ GL A + +++N M G PD T N+L++ CK G+
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286
Query: 61 V---------------------------------------EFCVEMYYSVCKLGSCADVS 81
+ E+C +M+ K G DV
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF----KAGIEPDVV 342
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
Y ILI + GM+D A +L+++ + G +P Y +IKG G D A EI
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKH 201
P YT LI R G EA +M +G +P F+ + DGL G+
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGEL 462
Query: 202 DLAEKI 207
+ A +
Sbjct: 463 EEARHL 468
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G+ ++G L+ GL A + ++ KM K G +PD+ + LI C+ G V++
Sbjct: 300 EGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDY 359
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ M + + G D Y LI G++D+A L + ++ P Y +I
Sbjct: 360 ALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILIC 419
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G R G D+A F++++ G P+ + LI + G EA + +M E+G P
Sbjct: 420 GMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNP 478
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L++G G ++ A M+N M ++G PD +N+LI+ C G
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + K TY ILI + + G++DEA ++ + + G +P +
Sbjct: 392 LDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP 147
+I G + G+ ++A F +++I +P
Sbjct: 452 LIDGLCKAGELEEARHLFYKMEIGKNP 478
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
TF+ LI KSG E VE + + G DV TY ++ + + + A + + +
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
++ +NP + + ++ G + G+ DDA F E+ KG PPN +YT +++ + R
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ L M G P S + + DG G+ D A + QL
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSV--- 71
+L+ G+ G L+ A+Q+ N+M G P + TFN+LI+ +CK+GE+E ++Y +
Sbjct: 416 ILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIG 475
Query: 72 ------CKLGSCADVSTYKILIPA--VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+L AD +++ A + ++AFR+L +V++G P ++Y ++
Sbjct: 476 KNPSLFLRLSQGAD----RVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMT 531
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT 177
+ R+G+ AF + + ++ P L G +A L+EM
Sbjct: 532 WSCRKGKLSVAFSLWLKY-LRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMN 584
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 82/188 (43%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ +G E A + KM G PD+ T+NS++ + + + +Y + KL
Sbjct: 136 VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL 195
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+ +T+ IL+ + K G D+A ++ + + G P +Y I+ G + + DD
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ +K+ G P+ L+ + G+ EA L + G + + + DG
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315
Query: 195 LKNCGKHD 202
L ++D
Sbjct: 316 LFRAKRYD 323
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P ++L+ L G + A+ ++ M K+G PD+ T+N+L+E C
Sbjct: 256 MVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E++ + K G DV Y +LI K M+DEA L L P + Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ E+ PP+ Y LI + GR +EA L+ M + G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 181 LTPISRCFDLVTDG 194
+ P ++ + DG
Sbjct: 436 VKPNIVTYNAMMDG 449
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ KG +P + +L+ + + A ++ ++K G P+L TFN++I C +G
Sbjct: 81 LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ ++ G D TY LI +SK G I A LL + + P +Y+
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G DA S+I +G + Y +LI C GR+ E L +M
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P F+++ D L G+
Sbjct: 261 VDPDDYTFNILIDALCKEGR 280
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 5/211 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + ++L+ G ++ A + +M + PD+ ++NSLI+ +C G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA- 119
+ E+ +C G DV TY IL+ A K D+A L +VE +P Y
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE---GIWPDFYTN 582
Query: 120 -PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
I+ + + A + + G PN YT LI + G F EA L +M +
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMED 642
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + F+++ L + D AEK+ +
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKAEKLRE 673
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +K P + + L+ GL N+G + K+++++M PD+ T+N LI+ +CK G
Sbjct: 361 LCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGR 420
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + K G ++ TY ++ ++ A + + +V+ G P Y
Sbjct: 421 ILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNV 480
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + D+A F E++ K P+ Y +LI GR L EM + G
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 181 LTPISRCFDLVTDGL 195
+P ++++ D
Sbjct: 541 QSPDVITYNILLDAF 555
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V ++L+ G ++ A + ++ + P + ++NSLI+ +C SG
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + DV TY ILI A+ K G I EA +L +++ G P Y
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + A F+ + G P+ Y LI + EA EM
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P ++ + DGL N G+
Sbjct: 506 LIPDIASYNSLIDGLCNLGR 525
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K P + + L+ GL N G + ++++++M G PD+ T+N L++ CK+
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + ++ + + G D T ++ + K + A L +L+ G +P Y
Sbjct: 561 FDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G F +A S+++ PP+ + +I + + +A EM G
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Query: 181 LTPISRCFD 189
L I + +
Sbjct: 680 LVNIEKSLN 688
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + L+ GL G++ A + +++ ++G D T+NSLI+ C G
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + D T+ ILI A+ K G I EA +L + + G P Y
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R +A F+ + +G P+ Y LI + EA E+
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P ++ + DGL N G+ +K+
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKL 392
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL G +++A ++ +M K P+L +++LI+ +CK G V + + + + G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY LI G E +LL +V + +P + +I + G+ +A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ + +G P+ Y L+ C R EA M + GL P ++++ DG
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVH-EARELFNRMVKRGLEPDVLNYNVLIDG 344
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 1/198 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++L+ L G + A ++ M+K+G P++ T+N++++ C V ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + K G D+ Y +LI K M+DEA L + P + Y +I G
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ E+ G P+ Y L+ + F +A + ++ E G+ P
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581
Query: 188 FDLVTDGLKNCGKHDLAE 205
+ D L K +AE
Sbjct: 582 NHAIVDNLCKGEKLKMAE 599
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A N+M++ P F+ L+ I + G + ++ + G ++T+ I
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI AF LL +++ G+ P + II G G A F + +G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ Y TLI + G+ A + L EM + + P + + DGL
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGL 205
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 2 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV 61
+ KG P ++ + L+ L+ + L + ++ + M + G D+ T+ + I CK G++
Sbjct: 198 TSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKI 257
Query: 62 EFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPI 121
+ V ++ + + G +V TY LI + K+G ++EA +VE+ NP Y +
Sbjct: 258 DEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGIL 317
Query: 122 IKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
+ G + +FD+A E+ KG PN V+ LI R G +A +MT GL
Sbjct: 318 VNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGL 377
Query: 182 TPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRSV 217
P + + + G + + AE++ LE L +V
Sbjct: 378 KPNAVTHNTLLQGFCRTNQMEQAEQV--LEYLLSNV 411
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + L++GL + G ++ +++++ G P++ T+ ++E C +
Sbjct: 548 MMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADR 607
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V ++ + Y ILI A SKAG EAF+L + +P Y+
Sbjct: 608 IDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSS 667
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G ++A F E++ +G PN YT LI + G+ + + L EMT
Sbjct: 668 IIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 727
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ DG G A K+
Sbjct: 728 IQPNKITYTIMIDGYCKMGNTKEATKL 754
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG + L+ GL G +E + +M+++G D ++N+LI CKSG++E
Sbjct: 481 KGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEE 540
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + K G D TY L+ ++ G +D+ R+LH + G P YA +++
Sbjct: 541 AFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLE 600
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + D+A F+++ + VY LI + G F EA M + P
Sbjct: 601 GYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHP 660
Query: 184 ISRCFDLVTDGL 195
+ + G+
Sbjct: 661 TIFTYSSIIHGM 672
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 15 LLVQGLLNAG-YLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
LLV GL G +LE+ K+G + T N+L+ +C+ G +E + + +
Sbjct: 456 LLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVE 515
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D +Y LI K+G I+EAF+L +++ G P Y ++KG +G+ DD
Sbjct: 516 RGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDD 575
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLI 157
E K G PN Y ++
Sbjct: 576 VGRVLHEAKDHGVVPNIYTYALML 599
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/178 (17%), Positives = 77/178 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + NP + +LV GL+ + A ++ +M +G P+ FN+LI+ + G
Sbjct: 302 MVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGN 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G + T+ L+ + +++A ++L L+ + + +
Sbjct: 362 MDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY 421
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ + +FD A + ++ N + T L+ + G+ +EA + + +
Sbjct: 422 VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLAD 479
>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G + A ++ +I P TFN +I +C +G
Sbjct: 103 MLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGY 162
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + + G ++ TY ILI + K+ ++ A R+L L E G+ P Y
Sbjct: 163 TGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTT 222
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++K FR QF+ F FSE+K KG+ + Y +I + GR EA + + +M
Sbjct: 223 VMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMAR 280
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ ++ L G LE A ++ +M + D D+ ++N+++ C++G+
Sbjct: 243 MKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGK 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G D T+ ILI + KAG ++ A R L N+ + G +
Sbjct: 303 LEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNC 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + GQ D A F+ +++K + Y++++ + R+ A+ L+ G
Sbjct: 363 VIDGLCKVGQLDHAIKMFASMEVK----DSFTYSSMVHNLCKARRYRHASRLLLACLRGG 418
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + V DGL G A +++
Sbjct: 419 MKILRANQRSVIDGLCYSGYTSEARRLKS 447
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%)
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
N I ++CK G++E + +LG DV TY L+ A S+ ID A+ ++H +
Sbjct: 10 LNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMK 69
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
E G +P Y +I A +R + F E+ G P+ Y +L+ + G+
Sbjct: 70 EAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPD 129
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
EA ++ L P S F+++ +GL N G
Sbjct: 130 EANRVFQDIILTNLLPSSSTFNIMINGLCNNG 161
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ + L G LE A+ +V I+ G PD+ T+N+L+ + ++ + + + +
Sbjct: 11 NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY LI A +K ++ + L ++ G P Y ++ F+ G+ D+
Sbjct: 71 AGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDE 130
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F +I + P+ + +I G A + + G P ++++ +
Sbjct: 131 ANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILIN 190
Query: 194 GLKNCGKHDLAEKI 207
GL K + A +I
Sbjct: 191 GLCKSRKLNAARRI 204
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ +++A ++++M + G PD+ T+NSLI K +
Sbjct: 37 GLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRS 96
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + + G DV +Y L+ K G DEA R+ +++ P S + +I G
Sbjct: 97 LDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMING 156
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G A + ++ +G P Y LI + + A L E+ E G P
Sbjct: 157 LCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVP 215
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG + L+QGL N L+ AK ++ KM + G +P+ + ++++ KSG+
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + M + G +V TY LI + KAG IDEA + + + G +P Y
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTA 543
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G ++A F+E+ KG ++ VYT L+ + G +A +M + G
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603
Query: 181 LTPISRCFDLVTDGLKN 197
L C+ G N
Sbjct: 604 LQLDLFCYTCFISGFCN 620
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + L+ G G L+ +Q+V +M + G D+ T+N+LI CK G
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + ++ + G A+V T+ + A K G++ EA +L + G Y
Sbjct: 274 METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTC 333
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DDA E+ +G P N YT L+ + + EA + L M + G
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 181 L 181
+
Sbjct: 394 V 394
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D GF P V L+ GL AG ++ A NKM G DP+++ + +L++ +CK+G +
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
V+++ + G D Y L+ K G + +AF L +++ G Y I
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
G +A FSE+ G P+R VY LI+ + G EA + EM
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++++ L G L A+ + ++M + G PD+ TFNSLI+ K GE++ ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G ADV TY LI K G ++ A+ + +G ++ + +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G +A F++++++G N YT LI + GR +A L EM G+
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEV 212
+ ++ DGL C + +AE + L +
Sbjct: 366 YTVLVDGL--CKERKVAEAEDVLRM 388
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G AG L+ A ++++M++QG ++ T+ L++ +CK +V ++ + K G
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+ Y LI ++A LL + G SLY +I+G + D+A
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+++ G PN +YTT++ C + G+ EA L ++ + G P + + DGL
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513
Query: 196 KNCGKHDLA 204
G D A
Sbjct: 514 CKAGSIDEA 522
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 10 VRGRDLLVQGLLNAGYL----ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
VR +LL L++ ++ E A ++++M +G + D+ + +LI+ +C +++
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
+ + + G + Y ++ A K+G + EA +L +++ G P Y +I G
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G D+A F++++ G PN YT L+ + G EA EM G++
Sbjct: 514 CKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573
Query: 186 RCFDLVTDG-LKNCGKHD 202
+ + DG LK HD
Sbjct: 574 VVYTALLDGYLKQGNLHD 591
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P ++ +G + A M+ K++ G P++ T+ +LI+ +CK+G
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + LG +V Y L+ + K G ++EA +L + +V G + +Y
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G DAF +++ G + YT I+ EA EM G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638
Query: 181 LTP 183
+ P
Sbjct: 639 IAP 641
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 82/176 (46%)
Query: 27 ESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKIL 86
+ + ++V ++ +Q P++ TFN +I+ +CK GE+ ++ + ++G DV T+ L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229
Query: 87 IPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
I K G +DE +L+ + G Y +I + G+ + A+ +F+ +K +G
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
N ++T + + G EA +M G+ + + DG G+ D
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLD 345
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G V V G + A ++ +M +G + T+ LI+ CK+G
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + + G +V TY +L+ + K + EA +L + + G LY
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F + A SE+K KG + +Y LI + EA + L +M E G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
L P + + D GK + E I L+ L S
Sbjct: 464 LEPNYIIYTTMMDACFKSGK--VPEAIAMLQKILDS 497
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G +P V+ LV GL G L A Q+ N+M+ +G D + +L++ K G
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + G D+ Y I M+ EA + ++ G P ++Y
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648
Query: 121 IIKGAFRRGQFDDAFCFFSEIK 142
+I + G ++A E++
Sbjct: 649 LISKYQKLGNLEEAISLQDEME 670
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS + P + + L++GL G L A +N+++K+G PD T+N +I CK G+
Sbjct: 517 MSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGD 576
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + DV T L+ + G +++A +L + E G Y
Sbjct: 577 LEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNT 636
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + G D A FF++++ +G P+ Y +++ GR EA N L ++ E G
Sbjct: 637 LIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG + +++V+GL G LE A + M ++G PD+ T+N+LI+ CK+
Sbjct: 377 MRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARN 436
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G D T L+ + K +EA LL + + G P Y
Sbjct: 437 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGT 496
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ F+ + + A + E+ + P+ Y TLI G+ EA + L E+ + G
Sbjct: 497 VMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKG 556
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P ++++ C + DL + +
Sbjct: 557 LVPDDTTYNIIIHAY--CKEGDLEKAFQ 582
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 7 NPPVRG--RDLLVQGLLNAGYL-----ESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
+PP RG D + G + A Y E A + ++M K+ P + T+N+LI+ +C G
Sbjct: 481 SPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIG 540
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ ++ + K G D +TY I+I A K G +++AF+ + ++E+ P
Sbjct: 541 KLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCN 600
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
++ G G+ + A F KG + Y TLI + G A ++ +M
Sbjct: 601 TLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEAR 660
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
GL P + +++V L G+ + A+ +
Sbjct: 661 GLQPDAFTYNVVLSALSEAGRSEEAQNM 688
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G +P V + L++ G L A+ ++ +M K+G P T+N+L+ + G ++
Sbjct: 240 GLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQA 299
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG-HNPFPSLYAPIIK 123
+ ++ G D+ TY +L + +AG +DEAF+L + +P Y ++
Sbjct: 300 TNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVD 359
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
F+ + DA E++ KG + + ++ R G+ EA L MTE GL P
Sbjct: 360 ACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAP 419
Query: 184 ISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
++ + D C ++A+ ++ +RS
Sbjct: 420 DVITYNTLIDAY--CKARNVAKAFVLMDEMVRS 450
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + F P V + L+ GL G LE A ++ ++G D+ T+N+LI+ +CK G+
Sbjct: 587 MLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGD 646
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G D TY +++ A+S+AG +EA +LH L E G Y P
Sbjct: 647 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY-P 705
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP--NRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+IK + + S+ + G+ ++ Y + GG+ EA L EM +
Sbjct: 706 LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQ 765
Query: 179 MGLTPISRCFDLVTDGL 195
G++ S + + +GL
Sbjct: 766 KGMSVDSSTYITLMEGL 782
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+LLV + G L A ++ M G PD+ T+N+L++ C+ G + + + K
Sbjct: 214 NLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKK 273
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +TY L+ A ++ G I +A ++ + G P Y + G + G+ D+
Sbjct: 274 EGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDE 333
Query: 134 AFCFFSEIK-IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
AF E++ + P+ Y TL+ C + R +A N L EM + G+ ++V
Sbjct: 334 AFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVV 393
Query: 193 DGLKNCGKHDLAEKIEQLEV 212
GL C + L E + +L++
Sbjct: 394 KGL--CREGQLEEALGRLKM 411
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 29 AKQMVNKMIKQGS-DPDLETFNSLIETICKSGEV--EFCVEMYYSVCKLGSCADVSTYKI 85
A Q+++ ++G P L+ N+++ + +S + ++++ S+ L + T+ +
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ G + +A L + G +P Y ++K R+G +A + +K +G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P R Y TL++ R G +A N + MT G P ++++ GL GK D A
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335
Query: 206 KIE 208
K++
Sbjct: 336 KLK 338
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+++G P V + L+ A + A ++++M++ G D T N+L+ +CK
Sbjct: 412 MTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKR 471
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ S + G D +Y ++ A K + A L + + P Y
Sbjct: 472 YEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNT 531
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+IKG G+ +A +E+ KG P+ Y +I + G +A + +M E
Sbjct: 532 LIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENY 591
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P + + +GL GK + A K+
Sbjct: 592 FKPDVVTCNTLMNGLCLHGKLEKAIKL 618
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 4/205 (1%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V + LV A ++ +M +G L T N +++ +C+ G++E +
Sbjct: 348 SPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALG 407
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
+ + G DV TY LI A KA + +AF L+ +V G ++
Sbjct: 408 RLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC 467
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM-EMTEMGLTPIS 185
+ ++++A +G P+ Y T++ + + E A YL EM++ LTP
Sbjct: 468 KEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENK-PEPALYLWDEMSKRKLTPSI 526
Query: 186 RCFDLVTDGLKNCGKHDLAEKIEQL 210
++ + GL GK L E I++L
Sbjct: 527 YTYNTLIKGLCTIGK--LTEAIDKL 549
>gi|147832566|emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G + A ++ +I P TFN +I +C +G
Sbjct: 103 MLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGY 162
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + + G ++ TY ILI + K+ ++ A R+L L E G+ P Y
Sbjct: 163 TGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTT 222
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++K FR QF+ F FSE+K KG+ + Y +I + GR EA + + +M
Sbjct: 223 VMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMAR 280
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 98/207 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ +GF P + ++L+ GL + L +A++++ ++ + G+ PD T+ ++++ +S +
Sbjct: 173 LQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQ 232
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E++ + G D +Y +I A++K G ++EA ++ + + Y
Sbjct: 233 FEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNT 292
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ R G+ + + EI+ G + +T LI + G A +L MT+MG
Sbjct: 293 VMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMG 352
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ V DGL G+ D A K+
Sbjct: 353 FDSTLVAQNCVIDGLCKVGQLDHAIKM 379
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ ++ L G LE A ++ +M + D D+ ++N+++ C++G+
Sbjct: 243 MKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGK 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G D T+ ILI + KAG ++ A R L N+ + G +
Sbjct: 303 LEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNC 362
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + GQ D A F+ +++K + Y++++ + R+ A+ L+ G
Sbjct: 363 VIDGLCKVGQLDHAIKMFASMEVK----DSFTYSSMVHNLCKARRYRHASRLLLACLRGG 418
Query: 181 LTPISRCFDLVTDG 194
+ + V DG
Sbjct: 419 MKILRANQRSVIDG 432
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%)
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
N I ++CK G++E + +LG DV TY L+ A S+ ID A+ ++H +
Sbjct: 10 LNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMK 69
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
E G +P Y +I A +R + F E+ G P+ Y +L+ + G+
Sbjct: 70 EAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPD 129
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
EA ++ L P S F+++ +GL N G
Sbjct: 130 EANRVFQDIILTNLLPSSSTFNIMINGLCNNG 161
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++ + L G LE A+ +V I+ G PD+ T+N+L+ + ++ + + + +
Sbjct: 11 NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY LI A +K ++ + L ++ G P Y ++ F+ G+ D+
Sbjct: 71 AGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDE 130
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F +I + P+ + +I G A + + G P ++++ +
Sbjct: 131 ANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILIN 190
Query: 194 GLKNCGKHDLAEKI 207
GL K + A +I
Sbjct: 191 GLCKSRKLNAARRI 204
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ +++A ++++M + G PD+ T+NSLI K +
Sbjct: 37 GLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRS 96
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++++ + + G DV +Y L+ K G DEA R+ +++ P S + +I G
Sbjct: 97 LDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMING 156
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G A + ++ +G P Y LI + + A L E+ E G P
Sbjct: 157 LCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVP 215
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 5/197 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++ + L A K+ K G PD+ TF++L+ +C V +++++ +C+
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR 175
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+V T+ L+ + + G + EA LL +VEDG P Y I+ G + G
Sbjct: 176 ----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVS 231
Query: 134 AFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A +++ H PN +Y+ +I + GR +A N EM E G+ P ++ +
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291
Query: 193 DGLKNCGKHDLAEKIEQ 209
DG + G+ A+++ Q
Sbjct: 292 DGFCSSGRWSEAQRLLQ 308
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M++ G + L+ G G L +A + +MI G PD+ T N+L++ +C +G+
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474
Query: 61 VEFCVEMYYSVCKL-----------GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
++ +EM+ ++ K G DV TY ILI + G EA L +
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
G P Y+ +I G ++ + D+A F + K P+ + TL++ + GR +
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594
Query: 170 ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
EM G+ + + + G + G + A I Q +S
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMIS 638
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ NP V L+ + A+++ ++M+ +G P+ T+NS+I+ CK
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ M+Y + G DV T+ LI A ID+ LLH + E G + Y
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYL--MEMTE 178
+I G G + A ++ G P+ TL+ G+ +A M+ ++
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Query: 179 M---------GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
M G+ P + ++++ GL N GK AE++
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEEL 527
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V+ ++L+ GL+N G A+++ +M +G P+ T++S+I +CK ++
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+M+ S+ DV T+ L+ KAG +D+ L + G Y +I G
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+ G + A F E+ G P+ +++T+
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSMLTV 654
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 11/194 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-----------QGSDPDLETFN 49
M G P + + L+ GL + G L+ A +M M K G +PD++T+N
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509
Query: 50 SLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
LI + G+ E+Y + G + TY +I + K +DEA ++ ++
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+P + ++ G + G+ DD F E+ +G + Y TLI + G A
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629
Query: 170 ANYLMEMTEMGLTP 183
+ EM G+ P
Sbjct: 630 LDIFQEMISSGVYP 643
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSG 59
M + G P +V G+ G SA ++ KM + P++ ++++I+ + K G
Sbjct: 204 MVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDG 263
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+Y + + G D+ TY +I +G EA RLL ++E NP Y+
Sbjct: 264 RHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYS 323
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + +F +A + E+ +G PN Y ++I + R A + M
Sbjct: 324 ALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
G +P F+ + DG CG + + E L
Sbjct: 384 GCSPDVFTFNTLIDGY--CGAKRIDDGTELLH 413
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 9/205 (4%)
Query: 11 RGRDL-LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
RG L L G LE A + + M++ P + FN L+ + + + + +Y
Sbjct: 42 RGESLKLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQ 101
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
+ + DV ++ ILI + A + + G P ++ ++ G
Sbjct: 102 KMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVED 161
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ +A F ++ PN +TTL+ R GR VEA L M E GL P +
Sbjct: 162 RVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 217
Query: 190 LVTDGLKNCGKH----DLAEKIEQL 210
+ DG+ G +L K+E++
Sbjct: 218 TIVDGMCKIGDTVSALNLLRKMEEM 242
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V G AG + A+++ N+MI +G P + T+N+ I+ +CK VE + ++ + + G
Sbjct: 240 VVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKG 299
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ +TY ++I + G +++A + + +D P +Y +I+ + +
Sbjct: 300 YMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGL 359
Query: 136 CFFSEIKIKGHPPNRPVYTTLIT---MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
F ++ PN Y LI+ + + + A L+EM E G P F+ V
Sbjct: 360 NVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVL 419
Query: 193 DGLKNCGKHDLAEKIEQLE 211
DGL G D A++I +L+
Sbjct: 420 DGLLLTGNQDFAKEILRLQ 438
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 90/219 (41%), Gaps = 28/219 (12%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + ++ + ++AG + A ++ M + G DL +FN++++ +CKS
Sbjct: 127 MRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKR 186
Query: 61 VEF----------------------------CVEMYYSVCKLGSCADVSTYKILIPAVSK 92
VE E + + K DV TY ++
Sbjct: 187 VEMADNKLFKVFRGRFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGV 246
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
AG + +A R+ + ++ +G P + Y I+ ++ ++A F E+ KG+ PN
Sbjct: 247 AGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTT 306
Query: 153 YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
Y +I GR +A ++ M + P + +++V
Sbjct: 307 YNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVV 345
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 23 AGYLESAKQM---VNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCAD 79
AG L K + V++M + P+ +TF + E +G+ + +++++S+ + G D
Sbjct: 111 AGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQD 170
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFS 139
++++ ++ + K+ ++ A L + F + ++KG FR GQ +A+ FF
Sbjct: 171 LNSFNTILDVLCKSKRVEMADNKLFKV-------FRGRFRILLKGFFRAGQLKEAWEFFL 223
Query: 140 EIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
++K + + YTT++ G G +A EM G+ P ++ L C
Sbjct: 224 QMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVL--CK 281
Query: 200 KHDLAEKIEQLEVSLRS 216
K ++ I E LR
Sbjct: 282 KDNVENAISVFEEMLRK 298
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG+ P +++++GL + G +E A + + +M +P+++ +N +I C + E
Sbjct: 295 MLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEE 354
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAV---SKAGMIDEAFRLLHNLVEDGHNPFPSL 117
+E + ++ + ++ TY ILI A+ K+ + A +LL +VE G P
Sbjct: 355 IEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFT 414
Query: 118 YAPIIKGAFRRGQFDDA 134
+ ++ G G D A
Sbjct: 415 FNRVLDGLLLTGNQDFA 431
>gi|224576613|gb|ACN56980.1| At1g03560-like protein [Capsella rubella]
Length = 196
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%)
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + GS +V+ Y +LI +K+G +++A RLLH ++++G P Y+ ++ G
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 68
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G+ ++A +F G N Y++LI G+ GR EA EM+E G T S
Sbjct: 69 KNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSY 128
Query: 187 CFDLVTDGLKNCGKHDLA 204
C++ + D L K D A
Sbjct: 129 CYNALIDALTKHXKVDEA 146
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G +G +E A +++++MI +G PD+ T++ ++ +CK+G
Sbjct: 13 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72
Query: 61 VEFCVEMYYSVCKLGSCADVST-YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
VE ++ Y+ C A S Y LI + KAG IDEA RL + E G Y
Sbjct: 73 VEEALD-YFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYN 131
Query: 120 PIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I + + D+A F + + +G YT LI+ + R EA M +
Sbjct: 132 ALIDALTKHXKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMID 191
Query: 179 MGLTP 183
G+TP
Sbjct: 192 KGITP 196
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 19 GLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCA 78
G LN GY + MI++GS P++ + LI+ KSG VE + + + + G
Sbjct: 1 GKLNEGY-----AVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 55
Query: 79 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFF 138
DV TY +++ + K G ++EA +G Y+ +I G + G+ D+A F
Sbjct: 56 DVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLF 115
Query: 139 SEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
E+ KG + Y LI + + EA M E
Sbjct: 116 EEMSEKGCTRDSYCYNALIDALTKHXKVDEAMXLFKRMEE 155
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 94 GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVY 153
G ++E + + N++ G P ++Y +I G + G +DA + +G P+ Y
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 154 TTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ ++ + GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERL 114
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++++G P + +I G + G+ D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + + + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDLAEKIE 208
G NC + DL E
Sbjct: 320 G--NCKEGDLETAFE 332
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DDA F E+ G PN +TTLI + GR A M L+P
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YMP 414
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 80/198 (40%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I +L +S
Sbjct: 252 CKNGRVDLAMEIYKLMLS 269
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 2 SDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
+D G+N P V + ++ G G ++ A + ++M+ QG PD+ T+NSLI+ +CK+
Sbjct: 190 ADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQ 249
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ V + + G D TY I+I G ++EA RLL + G P Y+
Sbjct: 250 AMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYS 309
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I+ + G+ +A F + KG PN +Y L+ G ++ + L M
Sbjct: 310 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 369
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLA 204
G+ R F+++ G D A
Sbjct: 370 GIPFEHRAFNILICAYAKHGAVDKA 394
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 38/245 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + L+ GL A ++ A ++ M +G PD T+N +I C G+
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQ 285
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + G DV TY +LI K G EA + ++V G P ++Y
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345
Query: 121 IIKG---------------------------AF--------RRGQFDDAFCFFSEIKIKG 145
++ G AF + G D A F+E++ G
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y+T+I + + GR +A + +M GL+P F + GL + G+ +
Sbjct: 406 LRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW---K 462
Query: 206 KIEQL 210
K+E+L
Sbjct: 463 KVEEL 467
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G +P + L+ GL + G + +++ +MI +G PD N++++ +CK G
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + V +G DV +Y LI G +DE+ + L +V G P Y
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G F+ G+ +DA + E+ K ++ + GR V A M+M + G
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615
Query: 181 LTPISRCFDLVTDGL 195
++ V GL
Sbjct: 616 TQLRIETYNTVLGGL 630
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 72/281 (25%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P R +++++G + G LE A +++ KM G PD+ T++ LI+ CK G
Sbjct: 261 MFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGR 320
Query: 61 VEFCVEMYYSVCKLGSCADVSTY-----------------------------------KI 85
++ S+ + G + + Y I
Sbjct: 321 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 380
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI A +K G +D+A + ++G P Y+ +I + G+ +DA F+++ +G
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440
Query: 146 HPPNRPVYTTLI-----------------TMCGRG------------------GRFVEAA 170
PN +T+LI M RG GR VEA
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 500
Query: 171 NYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
++ + +G+ P ++ + DG GK D E I+QL+
Sbjct: 501 DFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMD--ESIKQLD 539
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 82/165 (49%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ GL AG + +A+++ KM+ +G+ +ET+N+++ +C++ V+ + M+ +
Sbjct: 589 NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
DV T+ I+I A+ K G IDEA L +V G P Y+ +IK G ++
Sbjct: 649 KEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEE 708
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ F ++ G + + ++ G A YL ++ E
Sbjct: 709 SDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDE 753
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 16 LVQGLLNAGYLESAKQMV-NKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L++GL + + A MV +M + G PD+ ++N+LI+ +C + + +E+ +
Sbjct: 132 LIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTAD 191
Query: 75 G--SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
G +C+ +V +Y +I K G +D+A+ L H ++ G P Y +I G +
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
D A + KG P+ Y +I G+ EA L +M+ GL P D+V
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQP-----DVV 306
Query: 192 TDGL 195
T L
Sbjct: 307 TYSL 310
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
R ++L+ G ++ A +M + G PD+ +++++I +CK+G VE V +
Sbjct: 376 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQ 435
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ G ++ ++ LI + G + L ++ G +P I+ + G+
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
+A FF + G P+ Y TLI G+ E+ L M +GL P S ++
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 191 VTDGLKNCGK 200
+ +G G+
Sbjct: 556 LLNGYFKNGR 565
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G G ++ + + +++M+ G PD T+NSL+ K+G VE
Sbjct: 510 GVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDA 569
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ +Y + + T I++ + +AG I A L +V+ G Y ++ G
Sbjct: 570 LALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 629
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
D+A F +++ K + ++ +I + GR EA + M G P
Sbjct: 630 LCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVP 688
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 68/144 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G + + ++ GL ++ A +M + + + D+ TF+ +I + K G
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGR 670
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ ++ G DV TY ++I + + G+++E+ L ++ ++G +
Sbjct: 671 IDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNI 730
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIK 144
I++ +G A + ++I K
Sbjct: 731 IVRRLLEKGDVRRAGTYLTKIDEK 754
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 66/185 (35%), Gaps = 4/185 (2%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A + N M++ G + LI C G ++ + K G T LI
Sbjct: 75 AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134
Query: 89 AVSKAGMIDEAFRLL-HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGH- 146
+ D+A ++ + E G+ P Y +IKG + +A + G
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
Query: 147 --PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
PN Y T+I + G +A EM GL P ++ + DGL D A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254
Query: 205 EKIEQ 209
I Q
Sbjct: 255 VAILQ 259
>gi|255580733|ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529229|gb|EEF31203.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 619
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GFN +L+ N G +E A Q+ +M G +P ETFN LIE K+G
Sbjct: 330 MLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGR 389
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE C+ + + + G + + +I + + G +++A L L++ G +P + Y+
Sbjct: 390 VEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDETTYSY 449
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R Q + + E++ + P V+T LI G+ +A YL M
Sbjct: 450 LMTGYERDNQIQEVLKLYYEMEYRPLSPGLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRS 509
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P + ++ + G + K D A ++
Sbjct: 510 LNPSQQVYEALIAG--HLEKSDTARALQ 535
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
L+V + G L+SA ++ M+K+G + + LI C G++E +++ +
Sbjct: 308 SLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGT 367
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+G T+ LI +KAG ++E ++E G P + +I G+ +
Sbjct: 368 MGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQ 427
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F + + KG P+ Y+ L+T R + E EM L+P F +
Sbjct: 428 ANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYRPLSPGLLVFTPLIR 487
Query: 194 GLKNCGKHDLAEK 206
L +CGK + AEK
Sbjct: 488 SLCHCGKLEQAEK 500
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 81/200 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + GF + + L+ + + ++ MI + P+ T ++I +CK G+
Sbjct: 190 LEEHGFFLSLLSFNTLIHVVQKSDQYPLVWKIYEHMIHKRIYPNEATIRTMINALCKEGK 249
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V++ + V ++ + + G +D +L +++ Y+
Sbjct: 250 LQMFVDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGMLQKNMILDTVAYSL 309
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ R G D A + + +G N V+T LI GG+ +A EM MG
Sbjct: 310 IVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMG 369
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P F+ + +G G+
Sbjct: 370 LEPYDETFNFLIEGCAKAGR 389
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 82/179 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V +L G ++ ++ M+++ D ++ ++ + G ++ +E+Y ++ K G
Sbjct: 275 MVFRILQEGRVDVGIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRG 334
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A+ + +LI A G I++A +L + G P+ + +I+G + G+ ++
Sbjct: 335 FNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECL 394
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+F ++ +G P+ + +I G +A +L + + G +P + + G
Sbjct: 395 SYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDETTYSYLMTG 453
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 79/189 (41%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L G L+ +++++ + P + ++ I + G V+ + + + +
Sbjct: 240 MINALCKEGKLQMFVDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGMLQKN 299
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D Y +++ A + G +D A + +++ G N ++ +I G+ + A
Sbjct: 300 MILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKAN 359
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ G P + LI C + GR E +Y +M E GL P F+ + L
Sbjct: 360 QLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKL 419
Query: 196 KNCGKHDLA 204
G+ + A
Sbjct: 420 CETGEVNQA 428
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G + V L+ + A L+ A+ + +M+++G P+L T+N LI+ K +
Sbjct: 302 MRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQ 361
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E V++ ++ K A+V TY +I A +K+G ++A ++ ++ G P + Y
Sbjct: 362 WEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTA 421
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++GQ + A F ++ +G N Y++LI+ C + GR+ A +M +
Sbjct: 422 LISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKEN 481
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQLEV 212
P F+ + + G + A ++ EQ++
Sbjct: 482 CKPNVVTFNSLIAACSHGGHWEKASELFEQMQT 514
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + VR + ++ +G E A ++ KM+ G P T+ +LI K G+
Sbjct: 372 LEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQ 431
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE +E++ + + G +V TY LI A KAG + A L + ++ P +
Sbjct: 432 VEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNS 491
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++ A F +++ +G P+ Y LIT RGG++ A +M G
Sbjct: 492 LIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQG 551
Query: 181 LTPISRCFDLVTDGLKNCG 199
P + F+ + + L G
Sbjct: 552 CHPDAAVFNSLMEVLWQSG 570
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G +P + ++L+ + E A ++++ + KQ ++ T+N++I KSG+
Sbjct: 337 MLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQ 396
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E +++Y + G +TY LI A K G +++A + +++ G Y+
Sbjct: 397 PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSS 456
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+++ A FS++ + PN + +LI C GG + +A+ +M G
Sbjct: 457 LISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQG 516
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
P D + CG E+ Q +L++
Sbjct: 517 CKP---------DSITYCGLITAYERGGQWRRALKA 543
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
L A ++V +M +G D ++ T+++L+ K+ E++ ++Y + + G ++ TY I
Sbjct: 292 LRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNI 351
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI K +EA ++L L + Y +I + GQ + A + ++ G
Sbjct: 352 LIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAG 411
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
P+ YT LI+ G+ G+ +A +M G + + + G+ ++A
Sbjct: 412 VKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMA 470
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 87/200 (43%), Gaps = 10/200 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDP--------DLETFNSLIETICKSGEVEFCVEM 67
L++ L GYL+ A ++ + + + +P DL T+ ++I ++ +E+
Sbjct: 241 LLKELAKQGYLKRAVEIFDWL--RNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALEL 298
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ G +V TY L+ KA +D A + ++E+G +P Y +I +
Sbjct: 299 VAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVK 358
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
R Q+++A ++ + Y T+I+ C + G+ +A +M G+ P +
Sbjct: 359 RCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATT 418
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+ + G+ + A +I
Sbjct: 419 YTALISAYGKKGQVEKALEI 438
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G V ++++ L G LE A+ + +M + G PD+ T+NSLI+ K G
Sbjct: 47 MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 106
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ C+ ++ + DV TY LI K + +AF LH + +G P Y+
Sbjct: 107 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 166
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G +A FF +++ PN YT+LI + G EA + E+ + G
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ + + DGL G+ AE++
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEV 253
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R + L+ L G + +++ M G + T+N +I+ +CK G++E +
Sbjct: 19 PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G D+ TY LI K G++DE + + + +P Y +I +
Sbjct: 79 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+ AF F E+K G PN Y+T I + G EA + ++M + LTP
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 198
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ + D NC +LAE ++ +E L++
Sbjct: 199 YTSLIDA--NCKAGNLAEALKLVEEILQA 225
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 80/207 (38%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + GF P + + L+ G G L+ + +M DPD+ T+N+LI CK
Sbjct: 82 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 141
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E + + G +V TY I A K GM+ EA + ++ P Y
Sbjct: 142 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTS 201
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G +A EI G N YT L+ GR EA M G
Sbjct: 202 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 261
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + + G + + A+ I
Sbjct: 262 VAPNQETYTALVHGFIKAKEMEYAKDI 288
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ AG L A ++V ++++ G ++ T+ +L++ +C+ G ++ E++ ++ G
Sbjct: 202 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 261
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY L+ KA ++ A +L + E P LY I+ G + ++A
Sbjct: 262 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 321
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM--GLTPISRCFDL 190
EIK G N +YTTL+ + G+ EA L EM ++ GL + CF++
Sbjct: 322 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCK-NNCFEV 377
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D +P V + L+ + A + +++M G P++ T+++ I+ CK G
Sbjct: 117 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + ++ + TY LI A KAG + EA +L+ +++ G Y
Sbjct: 177 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 236
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ +A F + G PN+ YT L+ + A + L EM E
Sbjct: 237 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 296
Query: 181 LTPISRCFDLVTDGLKN 197
+ P + + GL N
Sbjct: 297 IKPDLLLYGTILWGLCN 313
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 12/200 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P LV G + A +E AK ++ +M ++ PDL + +++ +C
Sbjct: 257 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + G + Y L+ A K+G EA LL +++
Sbjct: 317 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------ 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + F+ A F E+ KG P++ YT LI + G EA N M E+G
Sbjct: 365 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 424
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ + + GL + G+
Sbjct: 425 MELDLHAYTALIWGLSHSGQ 444
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + G L+ A + M + P+ T+ SLI+ CK+G
Sbjct: 152 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 211
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G +V TY L+ + + G + EA + ++ G P Y
Sbjct: 212 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA 271
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + + + A E+K K P+ +Y T++ R EA + E+ E G
Sbjct: 272 LVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 331
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ + + + D G+
Sbjct: 332 INTNAVIYTTLMDAYFKSGQ 351
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 3/192 (1%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
LE A + KM K P + N+L+ + K G + + + + G V TY I
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+I + K G ++ A L + E G P Y +I G + G D+ C F ++K
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
P+ Y LI + R +A +L EM GL P + D C + L E
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAF--CKEGMLQE 179
Query: 206 KIEQLEVSLRSV 217
I + V +R V
Sbjct: 180 AI-KFFVDMRRV 190
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
LV GL E AK++ ++M+ +G PD + +LI+ K G ++ + + + ++G
Sbjct: 365 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 424
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D+ Y LI +S +G + +A LL ++ G P +Y +IK + G+ D+A
Sbjct: 425 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 484
Query: 136 CFFSEIKIKG 145
+E+ +G
Sbjct: 485 ELQNEMAKRG 494
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P L+ G + G L+ A + ++MI+ G + DL + +LI + SG+
Sbjct: 385 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ 444
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 110
V+ + + G D Y LI G +DEA L + + + G
Sbjct: 445 VQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 201 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGR 260
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G Y
Sbjct: 261 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTT 320
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +G
Sbjct: 321 LIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 380
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 381 LKPDTXTYTMIINEF--CKKGDVWK 403
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 48 FNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
FN L+ CK G++ ++ ++ K G V +Y L+ + G ++E FRL ++
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 108 EDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFV 167
G P Y+ +I G + + DDA F E+ +KG PN +TTLI + GR
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 168 EAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
A +M L P ++ + GL C K DL +
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGL--CKKGDLKQ 298
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P V + L+ G + G L ++ + M+ G PD+ T++ LI +CK +++
Sbjct: 170 GLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 229
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E++ + G + T+ LI K G +D A + ++ P Y +I G
Sbjct: 230 NELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 289
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++G A E+ +KG ++ YTTLI C + G A + M + +
Sbjct: 290 LCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLD 349
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + GL G+ AEK+ E L V L+
Sbjct: 350 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 239 KGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 298
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 299 AHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALIS 358
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ G P+ YT +I + G + + L +M G P
Sbjct: 359 GLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAP 418
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 419 SVVTYNVLMNG 429
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ G + A+ + + + K G P + ++N+L+ + G++ + ++
Sbjct: 144 NILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLA 203
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +D+A L ++ G P + +I G + G+ D
Sbjct: 204 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDL 263
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL + + D
Sbjct: 264 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLID 323
Query: 194 GLKNCGKHDLAEKIEQ 209
G C + DL E
Sbjct: 324 GC--CKEGDLDAAFEH 337
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 306 MSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 365
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + +G D TY ++I K G + + +LL ++ +GH P Y
Sbjct: 366 SVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNV 425
Query: 121 IIKG 124
++ G
Sbjct: 426 LMNG 429
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSD------------------ 42
M++KG+ ++++ GL N G L+ A ++VN M GS
Sbjct: 366 MNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDS 425
Query: 43 -----PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
PDL +++++I +CK+G V + + + D + Y + I + K G I
Sbjct: 426 RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKIS 485
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
AFR+L ++ + G N Y +I G + Q + + E++ +G P+ +Y ++
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSL 214
+ GGR +A + L EM + G++P F ++ C D + E E++L
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAF--CKACDFSAVDEIFEIAL 600
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 39/234 (16%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++L+ L ++G L+ A+++ +KM ++G +P+ +F L+ C++G
Sbjct: 47 MVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGF 106
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNP------- 113
+E+ + +LG + Y LI + K G D+A +L+ + +DG +P
Sbjct: 107 TSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNA 166
Query: 114 ----------------------------FPS----LYAPIIKGAFRRGQFDDAFCFFSEI 141
P Y ++ G + G ++A F ++
Sbjct: 167 RISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKM 226
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
K+ + NR Y + R G+ +EA L EM +MG+ P +++V DGL
Sbjct: 227 KVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGL 280
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P + +L++ G G LE A+ + KM + + E++N + + + G++ +
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ +G +V +Y I++ + K G++ +A L+ + G P Y ++ G
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ +A E+ G PN L+ + GR EA L +M E G +
Sbjct: 318 TGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVT 377
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++V DGL N GK D A +I
Sbjct: 378 CNIVIDGLCNNGKLDKAIEI 397
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P V ++++ GL G L A+ ++ M G PD T+ +L+ C +G+
Sbjct: 261 MVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGK 320
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G + T IL+ ++ K G I EA LL + E G+
Sbjct: 321 VSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNI 380
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHP-----------------------PNRPVYTTLI 157
+I G G+ D A + + G P+ Y+T+I
Sbjct: 381 VIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTII 440
Query: 158 TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
+ + GR EA +EM L P S +D+
Sbjct: 441 SGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDV 473
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 7 NPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
NPP + ++L++ G ++ + M+ G P+ TFN LI +C SG ++
Sbjct: 17 NPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAR 76
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E++ + + G + ++ IL+ +AG + LL + G +P +Y +I
Sbjct: 77 ELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSF 136
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
+ G+ DDA E++ G P+ + I+ G+ +EA+ +M
Sbjct: 137 CKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM 187
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P + +N L+ + K G V+ + + G + T+ +LI + +G +D+A L
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ E G P + +++G R G E++ G PN+ VY TLI+ +
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 163 GGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ +A + EM + GL+P F+ L + GK A +I
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRI 183
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM----IKQGSDPDLETFNSLIETIC 56
M G +P V + + L ++G + A ++ M + P++ T+N ++ C
Sbjct: 152 MRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFC 211
Query: 57 KSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
K G +E ++ + + + +Y I + + + G + EA +L +V+ G P
Sbjct: 212 KEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVY 271
Query: 117 LYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
Y ++ G + G DA + G P+ YTTL+ G+ EA N L EM
Sbjct: 272 SYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM 331
Query: 177 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
G +P + +++ L G+ AE++ Q
Sbjct: 332 MRDGCSPNNYTCNILLYSLWKEGRISEAEELLQ 364
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 37/217 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG N ++ + L+ GL + + ++++M ++G PD+ +N+++ ++C+ G
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGR 553
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKA---GMIDEAFRLLHNL----------- 106
V+ + + + G ++S++ ILI A KA +DE F + N+
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLT 613
Query: 107 ---------VEDGHNPFPS-----------LYAPIIKGAFRRGQFDDAFCFFSEIKIKGH 146
V F + LY +I + + DDA ++ KG+
Sbjct: 614 FNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGY 673
Query: 147 PPNRPVYTTLITMCGRGGRFVEA---ANYLMEMTEMG 180
+ + +I G+ G EA A +MEM G
Sbjct: 674 WFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEG 710
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ G AGY +++ + + G P++ + +LI+ CK+G+V ++ + +L
Sbjct: 163 IMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRL 222
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + TY +L+ K G+ E F++ N+ G P Y +I G D A
Sbjct: 223 GLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKA 282
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F F+E++ KG Y LI RG +F EA + ++ ++GL+P ++++ +G
Sbjct: 283 FKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILING 342
Query: 195 LKNCGKHDLAEKI-EQLEVS 213
+ GK D A ++ QL+ S
Sbjct: 343 FCDVGKMDTAVRLFNQLKSS 362
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 85/213 (39%), Gaps = 7/213 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ G G QM M + G P+ +N LI C G
Sbjct: 219 MDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGM 278
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +++ + + G V TY ILI + + EA +L+H + + G +P Y
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D A F+++K G P Y TLI + A + + EM E
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398
Query: 181 LTPISRCFDLVTDGL-------KNCGKHDLAEK 206
+ + ++ D K C H L EK
Sbjct: 399 IARSKVTYTILIDAFARLNYTDKACEMHSLMEK 431
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ G P + L+ N G ++ A ++ +M ++G + T+N LI +C+ +
Sbjct: 254 MNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V++ + V K+G ++ TY ILI G +D A RL + L G +P Y
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNT 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + A E++ + ++ YT LI R +A M + G
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSG 433
Query: 181 LTPISRCFDLVTDG 194
L P + ++ G
Sbjct: 434 LVPDVYTYSVLIHG 447
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 4/213 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ + G +P V L+ G G + AK + KM + G P+ T++ L+ K G
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGL 243
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+MY ++ + G + Y LI GM+D+AF++ + E G Y
Sbjct: 244 QREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNI 303
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R +F +A ++ G PN Y LI G+ A ++ G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG 363
Query: 181 LTPISRCFDLVTDGLKN----CGKHDLAEKIEQ 209
L+P ++ + G G DL +++E+
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 90/227 (39%), Gaps = 45/227 (19%)
Query: 8 PPVRGRDLL----VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
PP++ L QGL + + S ++N ++ G P + SLI + SG +
Sbjct: 18 PPIKTLLLFNTASYQGLHHTSH--SISFILNHLLSSGMLPQAQ---SLILRLI-SGRIPS 71
Query: 64 CVEMYYSVCKLGSCADVS-TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + SC+ + Y ++ A + D+A LH+++ +GH P + + ++
Sbjct: 72 SLMLQLTQAHFTSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLL 131
Query: 123 KGAFRRGQFDDAFCFFSEIKIK----------------------------------GHPP 148
R FD A+ F+ +K K G P
Sbjct: 132 CLLIRSNYFDKAWWIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSP 191
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
N +YTTLI C + G + A N +M +GL P + ++ +G
Sbjct: 192 NVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGF 238
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 35/222 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEV--- 61
G +P + ++L+ G + G +++A ++ N++ G P L T+N+LI K +
Sbjct: 328 GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387
Query: 62 --------EFCV------------------------EMYYSVCKLGSCADVSTYKILIPA 89
E C+ EM+ + K G DV TY +LI
Sbjct: 388 LDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHG 447
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
G + EA + +L E P +Y +I G + G A +E+ G PN
Sbjct: 448 XCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+ + + + R ++ EA L +M GL P + +V
Sbjct: 508 VASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 1/194 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D +V +++ + A ++ MI +G P TFN+L+ + +S + ++ +V K
Sbjct: 93 DAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIF-NVLK 151
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ ++ I+I +AG FRLL L E G +P +Y +I G + G
Sbjct: 152 SKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVML 211
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F ++ G PN+ Y+ L+ + G E M G+ P + ++ +
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLIS 271
Query: 194 GLKNCGKHDLAEKI 207
N G D A K+
Sbjct: 272 EYCNDGMVDKAFKV 285
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P R ++++ G ++ A + ++M +G P T+NSLI+ +CK+G + + E+
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWEL 390
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ AD+ TY LI K +D+A L+ + E G P Y +I G +
Sbjct: 391 VDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCK 450
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
GQ +A F ++ IKG+ N Y +I + G F EA L +M + G+ P +
Sbjct: 451 GGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVT 510
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
++ + L + +++ A+K+
Sbjct: 511 YETIIQALFHKDENEKAQKL 530
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M K NP ++LV L G ++ AK ++ M+K+G +P + T+N+L++ C E
Sbjct: 254 MVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNE 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + ++ + +Y I+I K M+DEA L H + G P Y
Sbjct: 314 VGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNS 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ A+ E+ P + Y +LI + + +A + ++ E G
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHG 433
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P ++++ DGL G+ A+ + Q
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+G P + L+ GL AG + A ++V++M D+ T+NSLI+ CK+ V+
Sbjct: 362 RGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDK 421
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+ + + + G ++ TY ILI + K G + A + +L+ G+N Y +I
Sbjct: 422 AIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMIN 481
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
G + G FD+A S+++ G P+ Y T+I +A L EM G+
Sbjct: 482 GLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 35 KMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVS------------- 81
+M +G PDL T + LI C G++ F ++ + K+G C +
Sbjct: 92 QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLA 151
Query: 82 --------TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
TY ILI + K G A ++L + N +Y+ II G + D
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A+ +SE+ +K PP +++LI G+F +A EM + P + F+++ D
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271
Query: 194 GLKNCGKHDLAEKI 207
L GK A+ +
Sbjct: 272 ALCKEGKIKEAKNV 285
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V L+ G G + A ++ N+M+ + +PD TFN L++ +CK G+++ +
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNV 285
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ K G V TY L+ + +A +L + P Y +I G +
Sbjct: 286 IAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCK 345
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
D+A C F E+ +G P++ Y +LI + GR A + EM
Sbjct: 346 IKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L GL G + A + ++ G + T+ LI +CK G+ +++ +
Sbjct: 128 ILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGK 187
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
+V Y +I + K ++ +A+ L ++ P ++ +I G G+F DA
Sbjct: 188 LVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDA 247
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F F+E+ +K P+ + L+ + G+ EA N + M + G+ P ++ + DG
Sbjct: 248 FRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDG 307
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G ++ + ++ G A V MI+ G +PD+ T+N+LI C G+
Sbjct: 298 MKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGK 357
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V E+ + G + +Y LI A SK G A LL + E GH Y
Sbjct: 358 VREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGA 417
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ D A ++ +G P+ +Y L++ + GRF A L+EM +
Sbjct: 418 LVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQN 477
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+TP + + DG G D A+K+ QL +
Sbjct: 478 VTPDAFVNATLVDGFIRHGNLDEAKKLFQLTI 509
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P + + L+ G G +E A + ++ +G P ++T+ ++I CK G+ E
Sbjct: 231 KGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEA 290
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + + G + + +I A K G EA + ++E G P + Y +I
Sbjct: 291 VDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLIN 350
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G+ +G+ +A +G PN+ YT LI + G +V A+ L+EM+E G T
Sbjct: 351 GSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTL 410
Query: 184 ISRCFDLVTDGLKNCGKHDLA 204
+ + GL G+ D+A
Sbjct: 411 DLIAYGALVHGLVVAGEVDVA 431
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSG 59
M K P ++ +G ++ A ++ N +I PD+ NSL+ + G
Sbjct: 122 MKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHG 181
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
+VE ++Y + D T I+ + K G ++E L+ G P Y
Sbjct: 182 KVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYN 241
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + G + A F E+K+KG P Y +I + G+F L+EM E
Sbjct: 242 TLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKER 301
Query: 180 GLTPISRCFDLVTDG 194
GL + F+ + D
Sbjct: 302 GLAVSLQIFNGIIDA 316
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ L++ G +E A+++ ++M+ + D D T + + +CK G+VE +
Sbjct: 165 PDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHL 224
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
G ++ Y LI K G I+ A L L G P Y +I +
Sbjct: 225 IEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCK 284
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+G+F+ E+K +G + ++ +I + G +EAA+ + M E G P
Sbjct: 285 KGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMAT 344
Query: 188 FDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
++ + +G +C K + E E LE ++R
Sbjct: 345 YNTLING--SCSKGKVREAEELLEHAIR 370
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 82/197 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+ P LV G + G L+ AK++ I++G D + N++I+ CK G
Sbjct: 473 MLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGM 532
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + D TY +I K + A R+ +++ P +
Sbjct: 533 MNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTS 592
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G + A F E++ G PN YT LI + G+ +A + +M
Sbjct: 593 LINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINK 652
Query: 181 LTPISRCFDLVTDGLKN 197
P F+ + +GL N
Sbjct: 653 CIPNDATFNYLVNGLTN 669
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P ++L+ GL G +AKQ++ +M+ Q PD +L++ + G
Sbjct: 438 MMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGN 497
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +++ + G V +I K GM+++A + H+P Y+
Sbjct: 498 LDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYST 557
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G ++ A F + K PN +T+LI R G A EM G
Sbjct: 558 IIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFG 617
Query: 181 LTP 183
P
Sbjct: 618 FEP 620
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 1/188 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L+ G + G + A++++ I++G P+ ++ LI K+GE
Sbjct: 333 MIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGE 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+ + + G D+ Y L+ + AG +D A + ++E G P ++Y
Sbjct: 393 YVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNV 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G ++G+F A E+ + P+ V TL+ R G EA E G
Sbjct: 453 LMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERG 512
Query: 181 L-TPISRC 187
+ T + C
Sbjct: 513 IDTSVVEC 520
>gi|297839813|ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
Length = 832
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++Q L A LE A K + G D +T+N+L+ G E+Y S+ K
Sbjct: 245 VIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTD 304
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S D STY+++IP+++K+G +D AF+L + E P S+++ ++ + G+ D +
Sbjct: 305 SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSM 364
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E++ GH P+ ++ +LI + G+ A EM + G P + ++ +
Sbjct: 365 KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESH 424
Query: 196 KNCGKHDLAEKI 207
GK ++A +
Sbjct: 425 AKSGKLEVAMSV 436
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L++ L +G L++A ++ +M ++ P F+SL++++ K+G ++ +++Y +
Sbjct: 313 ELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 372
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + + LI + +KAG +D A RL + + G P LY II+ + G+ +
Sbjct: 373 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 432
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLVT 192
A F +++ G P Y+ L+ M G+ A MT GL P +S L+T
Sbjct: 433 AMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLT 492
Query: 193 DGLKNCGKHDLAEKI 207
L N D+A KI
Sbjct: 493 -LLANKRLVDVAGKI 506
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LN G A ++ M K S D T+ +I ++ KSG ++ +++ + +
Sbjct: 280 LMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK 339
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S + L+ ++ KAG +D + ++ + GH P +++ +I + G+ D A
Sbjct: 340 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTAL 399
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E+K G PN +YT +I + G+ A + +M + G P + + +
Sbjct: 400 RLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMH 459
Query: 196 KNCGKHDLAEKI 207
G+ D A KI
Sbjct: 460 AGSGQVDSAMKI 471
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P LV + AG L+++ ++ +M G P F SLI++ K+G+
Sbjct: 335 MKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK 394
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + K G + Y ++I + +K+G ++ A + ++ + G P PS Y+
Sbjct: 395 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSC 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ GQ D A ++ + G P Y +L+T+ A L+EM MG
Sbjct: 455 LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 514
Query: 181 LT 182
+
Sbjct: 515 YS 516
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 16/162 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P L++ +G ++SA ++ N M G P L ++ SL+ +
Sbjct: 440 MEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRL 499
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + +G DV +L+ + A +D A + L + G +
Sbjct: 500 VDVAGKILLEMKAMGYSVDVCASDVLMIYIKDAS-VDLALKWLRFMGSSGIKTNNFIIRQ 558
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ + + G +D A RP+ TL+ G+
Sbjct: 559 LFESCMKNGLYDSA---------------RPLLETLVHSAGK 585
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + + LV GL E A+++V +M+ QG P+ FN+LI +C G
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 429
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + +G D +Y LI AG DEA ++ +V G +P Y
Sbjct: 430 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNT 489
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + DDA+C F E+ KG P Y T++ + RF EA + M G
Sbjct: 490 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 549
Query: 181 LTPISRCFDLVTDGL--KNC 198
++++ +GL NC
Sbjct: 550 TKCDIYTYNIILNGLCKSNC 569
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + L+ G L+ G + QM+ KM +G PD T+ SL+ +C E
Sbjct: 233 MIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSE 292
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +++ + + G D + I A +K GMID+A + + + + G +P Y
Sbjct: 293 MHSFLDL---MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 349
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ DDA F+++ +G PN V+ +L+ ++ A + EM + G
Sbjct: 350 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 409
Query: 181 LTPISRCFDLVTDGLKNCGK 200
+ P + F+ + L N G+
Sbjct: 410 ICPNAVFFNTLICNLCNVGR 429
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V L+ L G ++ A+ N+MI +G P++ FNSL+ +C +
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 394
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E E+ Y + G C + + LI + G + E RL+ + G P Y P
Sbjct: 395 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 454
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A F + G P Y TL+ R +A EM G
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514
Query: 181 LTPISRCFDLVTDGL 195
+TP ++ + GL
Sbjct: 515 VTPGVVTYNTILHGL 529
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V + ++ GL AK++ MI G+ D+ T+N ++ +CKS
Sbjct: 510 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 569
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +M+ S+C G ++ T+ I+I A+ K G ++A L + +G P Y
Sbjct: 570 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRL 629
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+ + G ++ FS ++ G PN + L+ G A YL ++ E
Sbjct: 630 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 687
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + L+ G +A ++ A + +M+++G P + T+N+++ + ++
Sbjct: 475 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 534
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E+Y ++ G+ D+ TY I++ + K+ +DEAF++ +L G +
Sbjct: 535 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 594
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G+ +DA F+ I G PN Y + G E + M + G
Sbjct: 595 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 654
Query: 181 LTPISRCFDLVTDGLKNCG 199
P S+ + + L + G
Sbjct: 655 TAPNSQMLNALVRRLLHRG 673
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P L+ G AG + A+++ + M+ G P T+N+L+ C +
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + + G V TY ++ + + EA L N++ G Y
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + D+AF F + KG N +T +I +GGR +A + + G
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619
Query: 181 LTPISRCFDLVTDGL 195
L P + LV + L
Sbjct: 620 LVPNVVTYRLVAENL 634
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 91/242 (37%), Gaps = 35/242 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK---QGSDPDLETFNSLIETICK 57
M + G P +L++G N E A +++ M + P++ T+ ++I+ +CK
Sbjct: 160 MPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCK 219
Query: 58 SGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN------------ 105
+ + ++ + G + TY LI G E ++L
Sbjct: 220 AQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYT 279
Query: 106 --------------------LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
+VE+G +P ++ + G D A F++++ G
Sbjct: 280 YGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 339
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 205
PN Y LI + GR +A +M G+TP F+ + GL K + AE
Sbjct: 340 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 399
Query: 206 KI 207
++
Sbjct: 400 EL 401
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 9/188 (4%)
Query: 31 QMVNKMIKQGS---DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILI 87
+ N+M+++ S P+ T++ LI +C+ G ++ + + K G + L+
Sbjct: 81 SLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLL 140
Query: 88 PAVSKAGMIDEAFR-LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKI--- 143
+ + EA LL + E G P Y+ ++KG + ++A +
Sbjct: 141 KGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHG 200
Query: 144 KGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDL 203
+ PPN YTT+I + F A +M + G+ P + ++ + G + GK
Sbjct: 201 RSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGK--W 258
Query: 204 AEKIEQLE 211
E ++ LE
Sbjct: 259 KEVVQMLE 266
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + ++L++ G + A + NKM K+ PD++++ L++ +C+ +V
Sbjct: 177 GVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGA 236
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
V+++ + G D TY L+ ++ + + EA++LL + G NP Y +I G
Sbjct: 237 VDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILG 296
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R G+ DA +++ G PN Y TL+ G EA Y+ EM G +P
Sbjct: 297 FCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPH 356
Query: 185 SRCFDLVTDGLKNCGK 200
+ G N G+
Sbjct: 357 FAVIHALVKGFCNVGR 372
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Query: 11 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYS 70
R D+LV + YL A + K G PD +++N L+ C +G++ ++
Sbjct: 151 RILDILVS---HRNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNK 207
Query: 71 VCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQ 130
+ K D+ +Y+IL+ A+ + ++ A L +++ G P Y ++ R+ +
Sbjct: 208 MFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKK 267
Query: 131 FDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
+A+ +K+KG P+ Y T+I R GR +A + +M G P +
Sbjct: 268 LREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRT 327
Query: 191 VTDGLKNCGKHDLAEK 206
+ +GL + G D A K
Sbjct: 328 LVNGLCHLGMLDEATK 343
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 13/211 (6%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P ++ +L+Q L + A + M+ +G PD T+ +L+ ++C+ ++ E
Sbjct: 215 PDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLR---EA 271
Query: 68 YYSVCKL---GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
Y +C++ G D+ Y +I + G +A +++ ++ +G P Y ++ G
Sbjct: 272 YKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNG 331
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
G D+A + E+ KG P+ V L+ GR EA L + E P
Sbjct: 332 LCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPH 391
Query: 185 SRCFDL-------VTDGLKNCGKHDLAEKIE 208
+ + V DG+K G + KIE
Sbjct: 392 KDTWMIIVPQICEVDDGVKIDGVLEEVLKIE 422
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 66/134 (49%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KGF P L+ L L A +++ +M +G +PD+ +N++I C+ G
Sbjct: 243 MLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGR 302
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + G ++ +Y+ L+ + GM+DEA + + ++ G +P ++
Sbjct: 303 AHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHA 362
Query: 121 IIKGAFRRGQFDDA 134
++KG G+ ++A
Sbjct: 363 LVKGFCNVGRIEEA 376
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 50/122 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG NP + + ++ G G A ++++ M G P+L ++ +L+ +C G
Sbjct: 278 MKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGM 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + L+ G I+EA +L +E P +
Sbjct: 338 LDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMI 397
Query: 121 II 122
I+
Sbjct: 398 IV 399
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 107/197 (54%), Gaps = 4/197 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIK-QGSDPDLETFNSLIETICKSGEVEFCVEMYYS-V 71
++LV+ +G LESA +++++M K + S P++ T+++LI+ +C +G ++ +E++ V
Sbjct: 203 NILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMV 262
Query: 72 CKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQF 131
K D TY +LI G D A +++ + +G +P Y+ ++ G + G+
Sbjct: 263 SKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRL 322
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLMEMTEMGLTPISRCFDL 190
++A F E+K G P+ YTTLI CG G R EA L EMTEM + F++
Sbjct: 323 EEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVG-RIDEAMELLKEMTEMKCKADAVTFNV 381
Query: 191 VTDGLKNCGKHDLAEKI 207
+ GL G+ D A ++
Sbjct: 382 LLKGLCREGRFDEALRM 398
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P V +L+ G G LE AK++ ++M G PD + +LI C G
Sbjct: 297 MRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGR 356
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + ++ AD T+ +L+ + + G DEA R+L NL +G Y
Sbjct: 357 IDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRI 416
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ ++G+ + + + +G P+ L+ G A L +T+MG
Sbjct: 417 VLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMG 476
Query: 181 LTP 183
TP
Sbjct: 477 FTP 479
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 73/178 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P G L+ G ++ A +++ +M + D TFN L++ +C+ G
Sbjct: 332 MKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGR 391
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + M ++ G + +Y+I++ + + G ++++ LL ++ G P +
Sbjct: 392 FDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNE 451
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
++ G D+A + G P + LI R + + + E+ E
Sbjct: 452 LLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELVE 509
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
KGFN L+ L + ++++M + F +L++ KS E
Sbjct: 85 QKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHE 144
Query: 63 FCVEMYYSVCKL----GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH---NPFP 115
+EM+Y++ + S +ST + + ++ ID A + L L + H P
Sbjct: 145 RVLEMFYAIQPIVREKPSLKAIST---CLNILVESKQIDLAQKCL--LYVNEHLKVRPNT 199
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEI-KIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYL 173
++ ++K + G + A E+ K + PN Y+TLI +CG GR EA
Sbjct: 200 CIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCG-NGRLKEAIELF 258
Query: 174 MEM-TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
EM ++ + P + + ++ G + GK D A KI
Sbjct: 259 EEMVSKDQILPDALTYSVLIKGFCHGGKADRARKI 293
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P + L+ L + G + +++ M K P + T+N LI +CK G VE
Sbjct: 227 GMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERA 286
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + D+ TY L+ A+ K GM+DEA ++ L + +P Y +I G
Sbjct: 287 INFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDG 346
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
RRG D+A ++++ KG P+ + +L+ + +A L EM +
Sbjct: 347 LTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRIN 406
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
S + LV +GL + D+A ++ ++ +S R
Sbjct: 407 SSAYRLVINGLCRNKRVDIAIQVLEMMISGR 437
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P V ++L+ GL G +E A +M+ + PD+ T+N+L+ +CK G
Sbjct: 258 MKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGM 317
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++++ + + TY +I +++ G +DEA +L + ++E G P +
Sbjct: 318 VDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRS 377
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G Q +DA E+ + H N Y +I R R A L M
Sbjct: 378 LVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGR 437
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
P + + + + G + A+++ Q
Sbjct: 438 YKPDEEIYSTLIKSVADAGMVEEADELHQ 466
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++GL+ G +E A +++ M+ G PD+ T+N ++ CK ++ +++ + G
Sbjct: 63 LIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSG 122
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY +I ++ G D+A + G P+ Y +I+ ++ A
Sbjct: 123 CPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRAL 182
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
++ I+G P+ Y +L+ + G++ +AA + + G+ P + ++ + L
Sbjct: 183 EVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSL 242
Query: 196 KNCGKHDLAEKI 207
+CG D ++I
Sbjct: 243 CSCGLWDEVDEI 254
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +++V G L SA ++ M G PD+ T+N++I ++ +G+
Sbjct: 83 MVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGK 142
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ VE + + G + Y ILI V K A +L ++ +G P Y
Sbjct: 143 FDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNS 202
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ A + G+++DA I G PN Y +L+ G + E L M +
Sbjct: 203 LVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTS 262
Query: 181 LTPISRCFDLVTDGLKNCG 199
P ++++ +GL CG
Sbjct: 263 HPPTVVTYNILINGLCKCG 281
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%)
Query: 29 AKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIP 88
A +++ M +G PDL T+NSL+ K G+ E + Y++ G + TY L+
Sbjct: 181 ALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLH 240
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
++ G+ DE +L + + H P Y +I G + G + A FF ++ + P
Sbjct: 241 SLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSP 300
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ Y TL+T + G EA + +++ +P ++ V DGL G D A K+
Sbjct: 301 DIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKL 359
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS G P V + +++ L + G + A + +++G P L + LIE + K
Sbjct: 118 MSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCG 177
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E+ + G D+ TY L+ SK G ++A +++N++ G P Y
Sbjct: 178 TVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNS 237
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G +D+ + +K HPP Y LI + G A N+ ++M
Sbjct: 238 LLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSEN 297
Query: 181 LTP 183
+P
Sbjct: 298 CSP 300
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
D ET N ++ +CK G + ++ + ++ + + LI + + G I+ A R+L
Sbjct: 21 DEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVL 80
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+V G P Y ++ G +R Q A ++ + G PP+ Y T+I
Sbjct: 81 KTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDN 140
Query: 164 GRFVEAANYLMEMTEMG----LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
G+F +A + G L P + +LV K+CG E +E + +
Sbjct: 141 GKFDQAVEFWRGQLRRGCLPYLIPYTILIELV---WKHCGTVRALEVLEDMAI 190
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + LV+ +E A++ + KM+++G P++ET+N+LI+ +S
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCL 477
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ C ++ + K G +V +Y LI + K I EA +L ++V G P +Y
Sbjct: 478 FDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNM 537
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ G+ DAF FF E+ + P Y LI + G+ +EA N E+T G
Sbjct: 538 LIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG 597
Query: 181 LTPISRCFDLVT 192
L+ FD++T
Sbjct: 598 LS-----FDVIT 604
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L ++ L++ E Q+ +++++ G PD + I+ K G+
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E+ + + G V Y ++I + K + +A +L +++ P Y
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + GQ ++AF +K++ P + +L+ R EA L EM G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317
Query: 181 LTPISRCFDLVTDGLKNCGKHD 202
P + + DG CG D
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVD 339
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KG + V + L+ G +AG ++ A ++ M K G P L T++ LI K G
Sbjct: 593 ITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGL 652
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++Y + ++ D Y LI + G + +A L + G P Y
Sbjct: 653 V-LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNC 711
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ G+ +++KI+G P Y LI + F A + EM E G
Sbjct: 712 LILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENG 771
Query: 181 LTP-ISRCFDLVTDGLKNCGK-HD 202
TP +S C +L+T GL+ G+ HD
Sbjct: 772 FTPSVSICDNLIT-GLREEGRSHD 794
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + ++L+ G AG L+ A + ++M+ + P L T+N LI +CK G+
Sbjct: 523 MVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGK 582
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + + G DV TY LI S AG + +A L + + G P + Y
Sbjct: 583 VMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHR 642
Query: 121 IIKGA----------------------------------FRRGQFDDAFCFFSEIKIKGH 146
+I G G A S ++ +G
Sbjct: 643 LIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGI 702
Query: 147 PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
P++ Y LI + GR + N + +M GL P + +D++ G
Sbjct: 703 QPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVG 750
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL A +E A++++ +M G PD T+ +L + K G
Sbjct: 278 MKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGN 337
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G T IL+ A+ K G +++A +L +E+G P +
Sbjct: 338 VDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT 397
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G + A+ +++ G PN Y +L+ EA + +M E G
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457
Query: 181 LTPISRCFDLVTDG 194
+ P ++ + DG
Sbjct: 458 VLPNVETYNTLIDG 471
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 8/212 (3%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V L+ L + A+ ++ M+ +G P+ + +N LI+ C +G+
Sbjct: 488 MEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + TY ILI + K G + EA L + G + Y
Sbjct: 548 LKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNS 607
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G A + +K G P Y LI CG+ G V EM +M
Sbjct: 608 LISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMN 666
Query: 181 LTP-------ISRCFDLVTDGLKNCGKHDLAE 205
L P + C+ D K C H E
Sbjct: 667 LVPDRVIYNALIHCYVEHGDVQKACSLHSAME 698
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
+ G P + +V G G + A + KM G P+ T+NSL++ C+ +E
Sbjct: 385 ENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNME 444
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPII 122
+ + + G +V TY LI ++ + D F++L + + G P Y +I
Sbjct: 445 EAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLI 504
Query: 123 KGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
+ +A ++ +G PN +Y LI G+ +A + EM +
Sbjct: 505 NCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV 564
Query: 183 PISRCFDLVTDGLKNCGKHDLAEKI 207
P ++++ +GL GK AE +
Sbjct: 565 PTLVTYNILINGLCKKGKVMEAENL 589
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
D+L+ + + + ++ M K G P + + N +E++ + E ++++ + +
Sbjct: 116 DMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVE 175
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D Y I A K G + A L+ + G +P +Y +I G + + D
Sbjct: 176 SGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD 235
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ + PNR Y TLI + G+ EA N M + P F+ + +
Sbjct: 236 AEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLN 295
Query: 194 GLKNCGKHDLAEKI-EQLEV 212
GL + A+++ E++EV
Sbjct: 296 GLCRAQMMEEAQRVLEEMEV 315
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 35/231 (15%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P L G L G ++++ + + +++G T + L+ +CK G +E
Sbjct: 317 GFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKA 376
Query: 65 VE--------------MYYSVCKLGSC--ADVS-------------------TYKILIPA 89
E ++++ G C D++ TY L+
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436
Query: 90 VSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
+ ++EA + + +VE G P Y +I G R FD F E++ KG PN
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496
Query: 150 RPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
Y LI + +EA L +M G+ P ++ ++++ DG GK
Sbjct: 497 VISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 1/180 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ G G L +++ +M++ PD +N+LI + G+
Sbjct: 628 MKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGD 686
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ ++ G D TY LI K G + + L++++ G P Y
Sbjct: 687 VQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDI 746
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + FD A+ ++ E+ G P+ + LIT GR +A EM G
Sbjct: 747 LIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806
>gi|224061145|ref|XP_002300357.1| predicted protein [Populus trichocarpa]
gi|222847615|gb|EEE85162.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++GL L+ AKQ+++KMI +G P FN++I CK G+++ +E+ + G
Sbjct: 281 VIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEAIEIMKLMESRG 340
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY ++I S G ++EA +L + P Y +I+G + QFD A
Sbjct: 341 LKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRGYCKLDQFDKAL 400
Query: 136 CFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+E++ G PN Y LI ++C + + A EM E GL S L+T
Sbjct: 401 ELLAEMEKFGVQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMKEKGLYLNSITRSLIT-A 459
Query: 195 LKNCGKHDLAEKI 207
+K + LA+++
Sbjct: 460 VKELEQEGLAKEV 472
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 1/189 (0%)
Query: 17 VQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGS 76
++ L + + A + KM+ QG PD E +I CK + + ++Y +
Sbjct: 176 IEALCRRSFYDWAWIVCEKMLDQGPLPDSEKIGKIICWFCKGSKAKDAHKVYLLAKEKSK 235
Query: 77 CADVSTYKILIPAVSKA-GMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
C LI ++ + G ++ A +L++ + ++ +I+G R D A
Sbjct: 236 CPPKPALYFLIGSLCRDDGTVNLALEMLNDFEGEAKKYAIKPFSSVIRGLCRIKDLDGAK 295
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S++ ++G PP V+ T+I+ +GG EA + M GL P + ++ G
Sbjct: 296 QLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEAIEIMKLMESRGLKPDVYTYTVIISGY 355
Query: 196 KNCGKHDLA 204
N G+ + A
Sbjct: 356 SNGGQMEEA 364
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V +++ G N G +E A ++++ K+ S T+++LI CK +
Sbjct: 336 MESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRGYCKLDQ 395
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAV 90
+ +E+ + K G + Y LI ++
Sbjct: 396 FDKALELLAEMEKFGVQPNADEYNKLIQSL 425
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + + P V + L+ GL G + A ++++M+K G + + T+ ++ +CKSG
Sbjct: 165 MVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN 224
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++++ + + A V Y I+I ++ K G +D+A L + + G Y+
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSS 284
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G G++DD E+ + PN ++ LI + + G+ +EA EM G
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARG 344
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEV 212
+ P + + + DG C ++ L E + L++
Sbjct: 345 IAPDTITYSSLIDGF--CKENRLGEANQMLDL 374
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG V ++ GL N G + +M+ +MI + P++ TF++LI+ K G+
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E+Y + G D TY LI K + EA ++L +V G P Y+
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + + D+ F EI KG + Y TL+ + G+ A EM G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ P + ++ DGL C +L + +E E
Sbjct: 450 VPPSVVTYGILLDGL--CDNGELQKALEIFE 478
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG + LVQG +G L AK++ +M+ +G P + T+ L++ +C +GE
Sbjct: 410 ISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 469
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + K + Y I+I + A +D+A+ L +L G P Y
Sbjct: 470 LQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNV 529
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G +A F ++K G P+ Y LI G + + + EM G
Sbjct: 530 MIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589
Query: 181 LTPISRCFDLVT 192
+ +V
Sbjct: 590 FAADASTIKMVV 601
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF P L+ G G + A +V++M++ P++ T N+LI +C G V
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA 193
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + K G A+ TY ++ + K+G A L + E Y+ +I
Sbjct: 194 LVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDS 253
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G DDA F+E+++KG + Y+++I GR+ + A L EM + P
Sbjct: 254 LCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN 313
Query: 185 SRCFDLVTDGLKNCGK 200
F + D GK
Sbjct: 314 VVTFSALIDVFVKEGK 329
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + +L+ A +++ ++ ++ +G D T+N+L++ C+SG+
Sbjct: 375 MVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGK 434
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + G V TY IL+ + G + +A + + + +Y
Sbjct: 435 LNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNI 494
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
II G + DDA+ F + +KG P+ Y +I + G EA +M E G
Sbjct: 495 IIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDG 554
Query: 181 LTPISRCFD-LVTDGLKNCGKHDLAEKIEQLEV 212
P ++ L+ L G E IE++++
Sbjct: 555 CAPSDCTYNILIRAHLGGSGVISSVELIEEMKM 587
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L+ + G L AK++ N+M+ +G PD T++SLI+ CK
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENR 364
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + G ++ TY ILI + KA +D RL + G Y
Sbjct: 365 LGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNT 424
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G + G+ + A F E+ +G PP+ Y L+ G +A +M +
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ ++++ G+ N K D A
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDA 508
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ V +++ L G L+ A + N+M +G D+ ++S+I +C G
Sbjct: 235 MEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGR 294
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +M + +V T+ LI K G + EA L + +V G P Y+
Sbjct: 295 WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSS 354
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + +A + KG PN Y+ LI + R E++ G
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVS 213
L + ++ + G GK ++A+++ Q VS
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVS 447
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G A + KM ++ + ++ +I+++CK G ++ + ++ + G ADV
Sbjct: 222 SGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVA 281
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL--YAPIIKGAFRRGQFDDAFCFFSE 140
Y +I + G D+ ++L ++ G N P++ ++ +I + G+ +A ++E
Sbjct: 282 YSSIIGGLCNDGRWDDGAKMLREMI--GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +G P+ Y++LI + R EA L M G P
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEP 382
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 62/166 (37%)
Query: 39 QGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDE 98
G + ++ T N +I C+ ++ F + K G + T+ LI G + E
Sbjct: 98 NGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSE 157
Query: 99 AFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT 158
A L+ +VE + P +I G +G+ +A + G N Y ++
Sbjct: 158 AVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLN 217
Query: 159 MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ G A + +M E + + +V D L G D A
Sbjct: 218 RMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDA 263
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+S KG P V ++++ GL G L A + KM + G P T+N LI
Sbjct: 515 LSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSG 574
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAF 100
V VE+ + G AD ST K+++ +S G +D+ F
Sbjct: 575 VISSVELIEEMKMRGFAADASTIKMVVVMLSD-GRLDKTF 613
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D ++P V +++++G+ G L+ A ++V +M + G PD T N L++ +C+ +
Sbjct: 73 IQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQ 132
Query: 61 VEFCVEMYYSVCKLGSCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V E+ + + G C +V TY +I KAG + +AF + +++++ G P Y
Sbjct: 133 VNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYN 192
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I G + + A + ++ + PP+ + +LI R G+ +A MEM +
Sbjct: 193 VLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQH 252
Query: 180 GLTPISRCFDLVTDGLKNCGKHDLAEKIEQL-EVSLRS 216
+ P F ++ L C ++ AE + L E+++R+
Sbjct: 253 HIQPNVYTFSIIIHSL--CTQNRSAEALSLLRELNMRA 288
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P ++L+ G A +ESA +M ++I PD+ TFNSLI+ C+ G+
Sbjct: 179 MLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQ 238
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL-VEDGHNPFPSLYA 119
++ + ++ + + +V T+ I+I ++ EA LL L + P +Y
Sbjct: 239 LDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYN 298
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
PII + G+ D+A ++++ KG P++ YT LI GR EA +M E
Sbjct: 299 PIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVET 358
Query: 180 GLTP 183
G P
Sbjct: 359 GCRP 362
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
L+ L+ G + A + I+ G PD+ +FN +I+ +C+ G ++ +E+ + +
Sbjct: 52 LLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEF 111
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGH-NPFPSLYAPIIKGAFRRGQFDD 133
G D T IL+ + + +++ +L L DG P Y +I G + G+ D
Sbjct: 112 GCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKD 171
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
AF ++++ G PN Y LI G+ A ++ P F+ + D
Sbjct: 172 AFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLID 231
Query: 194 GLKNCGKHDLAEKI 207
G CG+ D A +I
Sbjct: 232 GYCRCGQLDDAMRI 245
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG-SDPDLETFNSLIETICKSG 59
M++ G +P +++LV GL + +++ ++ + G P++ T+ S+I CK+G
Sbjct: 108 MTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAG 167
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ +Y + + G+ + TY +LI KA ++ A R+ L+ P +
Sbjct: 168 RMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFN 227
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMT-E 178
+I G R GQ DDA + E+ PN ++ +I R EA + L E+
Sbjct: 228 SLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMR 287
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++ + D L GK D A I
Sbjct: 288 ADIVPQTFIYNPIIDILCKGGKVDEANLI 316
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + +LL+ G AG + +A N+M G P + T+N LI C+ +
Sbjct: 169 MRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRD 228
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V + + + G TY ILI A +K +D AF +L + + G Y
Sbjct: 229 IARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGV 288
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G+ A F + +KG PN +Y +I GR G +A +MEM + G
Sbjct: 289 LLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNG 348
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P + L L N GK AE +
Sbjct: 349 LIPNVASYCLTIRLLCNEGKCQEAEAL 375
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G+ E + +M + G +P+L T+N LI C++GE + ++ + G
Sbjct: 79 LINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKG 138
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V +Y ILI + + + +A +L + +G P + +I G + G+ +A
Sbjct: 139 VVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANAL 198
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
FF+++K G PP+ Y LI R A ++M E GL P + ++
Sbjct: 199 HFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAF 258
Query: 196 KNCGKHDLA 204
+ D A
Sbjct: 259 AKENEMDRA 267
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDP-DLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+V+ L A + SA ++ + K G D+ +L+ C+SG+V ++ + +L
Sbjct: 8 VVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRL 67
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + TY LI G + F L + DG P Y +I R G+F A
Sbjct: 68 GVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSA 127
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
F E+ +KG N Y LI R + +A M G+ P F+L+ DG
Sbjct: 128 RLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDG 187
Query: 195 LKNCGK 200
GK
Sbjct: 188 YGKAGK 193
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + + L+ G +SA+ + ++M +G ++ ++N LI +C+ +
Sbjct: 99 MRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSK 158
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ V+++ ++ + G + T+ +LI KAG + A + + G P Y
Sbjct: 159 LKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNE 218
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R A F ++K +G P + YT LI + A L EM + G
Sbjct: 219 LICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAG 278
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
L + + ++ L GK A K+ Q
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQ 307
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + L+ G E +++ M +G +P L T+N+LI G+
Sbjct: 271 MRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQ 330
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +Y + G + +TY LI A KAG +D+ + +V G Y+
Sbjct: 331 PREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSS 390
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + GQ++ A F+E+ +G PN Y +LIT C +G ++ +A+ +M + G
Sbjct: 391 LISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGG 450
Query: 181 LTPISRCFDLVT 192
TP D+VT
Sbjct: 451 CTP-----DVVT 457
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P +R + L+ G A + +M+ +G P+ T+N+LI K+G+
Sbjct: 306 MKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQ 365
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ +E++ + G V TY LI A KAG + A L + + +G P Y
Sbjct: 366 LDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNS 425
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + Q++ A F +++ G P+ +T LI+ +GG++ A +M
Sbjct: 426 LITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQR 485
Query: 181 LTPISRCFDLVTDGLKNCG 199
P + F+ + D L G
Sbjct: 486 CKPDAIVFNAIIDTLWETG 504
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%)
Query: 26 LESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKI 85
++ A + +M + + ++ T+ +L+ K G ++ Y + + G+C +V TY
Sbjct: 226 VDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNT 285
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
LI K G+ ++ ++L + +G P Y +I GQ +A + + +G
Sbjct: 286 LIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEG 345
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ PN Y LI+ G+ G+ + EM G + + + G+ +LA
Sbjct: 346 YSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELA 404
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 64/159 (40%)
Query: 44 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLL 103
D+ T+ ++I +V+ +++ + +V TY L+ K G A
Sbjct: 209 DVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTY 268
Query: 104 HNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRG 163
+++ +DG P Y +I + G ++ + +K +G P Y TLI C
Sbjct: 269 NHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMC 328
Query: 164 GRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
G+ EA M + G +P + ++ + G+ D
Sbjct: 329 GQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLD 367
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++V L G + A +V+ MI+ G +PD+ T+ +L++ C E++ V++
Sbjct: 229 PNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKV 288
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + + G +V +Y LI K ID+A L + P Y+ +I G
Sbjct: 289 FDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCH 348
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
G+ DA F+E+ G PN Y+ L+ + R EA L + L P +
Sbjct: 349 VGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQV 408
Query: 188 FDLVTDGLKNCGKHDLAEKI 207
+++ DG+ G + A +
Sbjct: 409 YNIAIDGMCRAGDLEAARDL 428
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P V L+ GL L A + ++MI +G PD+ T+NSLI +C E
Sbjct: 152 MVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE 211
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + K +V + I++ A+ K G + EA ++ +++ G P YA
Sbjct: 212 WKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAA 271
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G R + D+A F + G N Y TLI + R +A EM
Sbjct: 272 LMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQE 331
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P + + + GL + G+
Sbjct: 332 LIPNTMTYSTLIHGLCHVGR 351
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 4/206 (1%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ L+ + + + + KM G PD+ T +I + C V+F + +
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ KLG D +T+ L+ + G I EA + +V +G P Y ++ G +
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
Q +A FSE+ KG P+ Y +LI + L EM + + P
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233
Query: 188 FDLVTDGLKNCGK----HDLAEKIEQ 209
++V D L GK HD+ + + Q
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQ 259
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P L+ GL + G L+ A + N+M+ G P+L T++ L++ +CK+ + + +
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
++ DV Y I I + +AG ++ A L NL G P + +I+G +
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-ISR 186
RG D+A F E+ G N Y T+ + + A L EM G + +S
Sbjct: 454 RGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVST 513
Query: 187 CFDLVT----DGLKNCGKHDLAE 205
LV DGL K L E
Sbjct: 514 TALLVKMLSDDGLDQSVKQILCE 536
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 94/216 (43%), Gaps = 2/216 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +++ + ++ A ++ K++K G PD TF +L+ +C G+
Sbjct: 82 MDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGK 141
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++++ + G +V TY L+ + K + EA L ++ G +P Y
Sbjct: 142 IGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNS 201
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++ +E+ PN ++ + G+ EA + + M + G
Sbjct: 202 LIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGG 261
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLRS 216
+ P + + DG +C + ++ E ++ ++ +R+
Sbjct: 262 VEPDVVTYAALMDG--HCLRSEMDEAVKVFDMMVRN 295
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%)
Query: 21 LNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADV 80
L+ L+ A ++M+ P + F L+ +I K + + + G DV
Sbjct: 32 LHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDV 91
Query: 81 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSE 140
T I+I + +D A +L +++ GH P + + +++G G+ +A F +
Sbjct: 92 YTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDK 151
Query: 141 IKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ +G PN Y TL+ + + EA N EM G++P
Sbjct: 152 MVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISP 194
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V L+ G ++ A ++ + M++ G ++ ++N+LI CK
Sbjct: 257 MIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQR 316
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ +C+ + TY LI + G + +A L + +V G P Y+
Sbjct: 317 IDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSI 376
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + + +A I+ P+ VY I R G A + + G
Sbjct: 377 LLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG 436
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
L P +++ GL G D A K+
Sbjct: 437 LQPDVWTHNIMIRGLCKRGLLDEASKL 463
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+P V+ ++ + G+ AG LE+A+ + + + +G PD+ T N +I +CK G ++
Sbjct: 401 NLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEA 460
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
+++ + + G + TY + + + A +LL ++ G + S A ++K
Sbjct: 461 SKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVK 519
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 51/95 (53%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ +G P V +++++GL G L+ A ++ +M + G + T+N++ + + ++ +
Sbjct: 432 LAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNK 491
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGM 95
+++ + G ADVST +L+ +S G+
Sbjct: 492 TSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGL 526
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++ + L A K+ K G P L TFN+L+ +C V +++++ +CK
Sbjct: 19 NILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK 78
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+V T+ L+ + + G + EA LL +VEDG P Y I+ G + G
Sbjct: 79 ----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 134
Query: 134 AFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A +++ H P+ +Y+ +I + GR +A N +EM + G+ P + +
Sbjct: 135 ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194
Query: 193 DGLKNCGKHDLAEKIEQLEVSLRSV 217
+G + GK A+++ Q E+ +R +
Sbjct: 195 NGFCSSGKWSEAQRLLQ-EMLVRKI 218
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 11/213 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++ G ++G A++++ +M+ + PD+ TF+ LI + K G+
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-----------D 109
+ ++ + G C +V T L+ + +G + +A + + + +
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
G P Y +I G G+F +A + E+ +G P+ Y+++I + R EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 170 ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
M +P F+ + G G D
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 13/222 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-----------QGSDPDLETFN 49
M G P V + L+ GL ++G L+ A +M M K G +PD++T+N
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 50 SLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
LI + G+ E+Y + G D TY +I + K +DEA ++ ++
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+P + +I G + G DD F E+ +G N Y TLI + G +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 170 ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ EM G+ P + + GL + K +L + + LE
Sbjct: 428 LDIFQEMISSGVYPDTITIRNMLTGLWS--KEELKKALAMLE 467
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ GL L+ A QM + M + P++ TFN+LI CK+G
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ + + G A+ TY LI K G I+ + + ++ G P
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKI 143
++ G + + + A E+++
Sbjct: 449 MLTGLWSKEELKKALAMLEELQM 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 12/219 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSG 59
M + G P +V G+ G SA ++ KM + PD+ ++++I+ + K G
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDG 166
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + G D+ TY +I +G EA RLL ++ +P ++
Sbjct: 167 RHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G + A E+ G PN TL+ G+ +A M +
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 180 -----------GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ P + ++++ GL N GK AE++
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEEL 325
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++ + L A K+ K G P L TFN+L+ +C V +++++ +CK
Sbjct: 19 NILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK 78
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+V T+ L+ + + G + EA LL +VEDG P Y I+ G + G
Sbjct: 79 ----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 134
Query: 134 AFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A +++ H P+ +Y+ +I + GR +A N +EM + G+ P + +
Sbjct: 135 ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194
Query: 193 DGLKNCGKHDLAEKIEQLEVSLRSV 217
+G + GK A+++ Q E+ +R +
Sbjct: 195 NGFCSSGKWSEAQRLLQ-EMLVRKI 218
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 11/213 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P + ++ G ++G A++++ +M+ + PD+ TF+ LI + K G+
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-----------D 109
+ ++ + G C +V T L+ + +G + +A + + + +
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
G P Y +I G G+F +A + E+ +G P+ Y+++I + R EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 170 ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
M +P F+ + G G D
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 13/222 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK-----------QGSDPDLETFN 49
M G P V + L+ GL ++G L+ A +M M K G +PD++T+N
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 50 SLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 109
LI + G+ E+Y + G D TY +I + K +DEA ++ ++
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 110 GHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEA 169
+P + +I G + G DD F E+ +G N Y TLI + G +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 170 ANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ EM G+ P + + GL + K +L + LE
Sbjct: 428 LDIFQEMISSGVYPDTITIRNMLTGLWS--KEELKRALAMLE 467
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P ++ GL L+ A QM + M + P++ TFN+LI CK+G
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ + + G A+ TY LI K G I+ + + ++ G P
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448
Query: 121 IIKGAFRRGQFDDAFCFFSEIKI 143
++ G + + + A E+++
Sbjct: 449 MLTGLWSKEELKRALAMLEELQM 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 12/219 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGS-DPDLETFNSLIETICKSG 59
M + G P +V G+ G SA ++ KM + PD+ ++++I+ + K G
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDG 166
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
++ + G D+ TY +I +G EA RLL ++ +P ++
Sbjct: 167 RHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I + G + A E+ G PN TL+ G+ +A M +
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 180 -----------GLTPISRCFDLVTDGLKNCGKHDLAEKI 207
G+ P + ++++ GL N GK AE++
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEEL 325
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A + ++M+ +G P+ TF +LI+ CK+G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E+Y + D+ TY LI + K G + +A L+ ++ G P Y
Sbjct: 263 VDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTT 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + VYT LI+ + GR V+A L EM +
Sbjct: 323 LIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVR 382
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 383 LKPDTGTYTMIINEF--CKKGDVWK 405
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 168 ITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESK 227
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + G + T+ LI K G +D A + ++ P Y
Sbjct: 228 MDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNT 287
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A ++ +KG P++ YTTLI C + G A + M +
Sbjct: 288 LIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQEN 347
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 348 IRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLK 384
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 113 VLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V + L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 173 LRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A +M L P ++ + GL
Sbjct: 233 EXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 293 --CKKGDLKQ 300
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ AK++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ +Y +I
Sbjct: 301 AHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALIS 360
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ P+ YT +I + G + + L EM G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 420
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 421 SVVTYNVLMNG 431
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + + N+L+ + G+++
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEG 196
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + G DV TY +LI + K +D+A ++ G P + +I G
Sbjct: 197 FRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDG 256
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + +M+ GL P
Sbjct: 257 HCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPD 316
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + BG C + DL E
Sbjct: 317 KITYTTLIBGC--CKEGDLDSAFEH 339
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A +++ M +G PD T+ +LI+ CK G+
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGD 332
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ P Y
Sbjct: 333 LDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTM 392
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 429
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L+SA + +MI++ D + +LI +C+ G
Sbjct: 308 MSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGR 367
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + + D TY ++I K G + + +LL + DGH P Y
Sbjct: 368 SVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNV 427
Query: 121 IIKG 124
++ G
Sbjct: 428 LMNG 431
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + LV G + +AK + N M + G +PD+ ++N LI CK +
Sbjct: 173 MMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKK 232
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + ++ + +V TY LI +SK+G I A +L+ + + G P Y
Sbjct: 233 VDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNS 292
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEM 176
II F+ Q D A ++ K +G P+ YT LI +GGR +A N ++
Sbjct: 293 IIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG +P V L+ G G L+ A + NK+I + PD TFN L++ CK +
Sbjct: 103 MVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 162
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + K G DV TY L+ ++ A + + + + G NP Y
Sbjct: 163 MKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 222
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A F+E+ K PN Y +LI + GR A + +M + G
Sbjct: 223 LINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 282
Query: 181 LTPISRCFDLVTDGL 195
+ P ++ + D L
Sbjct: 283 VPPNILTYNSIIDAL 297
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++LV G ++ K + M+KQG PD+ T+NSL++ EV ++ ++ +
Sbjct: 151 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQ 210
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ +Y ILI K +D+A L + + P Y +I G + G+
Sbjct: 211 GGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISY 270
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A ++ +G PPN Y ++I + + +A + + + G+ P + ++ D
Sbjct: 271 ALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILID 330
Query: 194 GLKNCGKHDLAEKI 207
GL G+ A I
Sbjct: 331 GLCKGGRLKDARNI 344
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G++P + L++GL G + A +K++ G D ++ +LI +CK GE
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ V + Y +I + K +++AF L +V G +P Y+ +I G
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
F G+ DA F++I ++ P+ + L+ + + E M + G+ P
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181
Query: 185 SRCFDLVTDGLKNCGKHDLAEKI 207
++ + DG + + + A+ I
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSI 204
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 8/204 (3%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
GF+ L+ GL G +A ++ ++ + + +N++I +CK V
Sbjct: 37 GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 96
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++Y + G +V TY LI G + +A L + ++ + P + ++ G
Sbjct: 97 FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 156
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAAN----YLMEMTEMG 180
+ + + F+ + +G P+ Y +L+ G R V+ N M + G
Sbjct: 157 FCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVD----GYRLVKEVNTAKSIFNTMAQGG 212
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P R ++++ +G K D A
Sbjct: 213 VNPDIRSYNILINGFCKIKKVDKA 236
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ A ++ ++M+ +G P+ TF +LI+ CK+G
Sbjct: 189 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGR 248
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 249 VDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 308
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G D AF + + + YT LI+ + GR V+A L EM +
Sbjct: 309 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVD 368
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAE 205
L P + + ++ + C K D+ +
Sbjct: 369 LKPDTGTYTMIINEF--CKKGDVWK 391
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ + M+ G PD+ T++ LI +CK +
Sbjct: 154 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 213
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ P Y
Sbjct: 214 MDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNT 273
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI C + G A + M +
Sbjct: 274 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 333
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 334 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLK 370
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+++ L+ Y + ++++ G L FN L+ CK G++ ++ ++ K G
Sbjct: 99 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 158
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
V +Y L+ + G +DE FRL ++ G P Y+ +I G + + DDA
Sbjct: 159 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 218
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F E+ +KG PN +TTLI + GR A M L P ++ + GL
Sbjct: 219 ELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 278
Query: 196 KNCGKHDLAE 205
C K DL +
Sbjct: 279 --CKKGDLKQ 286
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
KG P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+++
Sbjct: 227 KGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQ 286
Query: 64 CVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + G D TY LI K G +D AF ++++ Y +I
Sbjct: 287 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 346
Query: 124 GAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
G + G+ DA E+ P+ YT +I + G + + L EM G P
Sbjct: 347 GLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 406
Query: 184 ISRCFDLVTDG 194
++++ +G
Sbjct: 407 SVVTYNVLMNG 417
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + ++N+L+ + G+++
Sbjct: 123 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 182
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+A L ++ G P + +I G
Sbjct: 183 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 242
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + + + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 243 RCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 302
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ + DG C + DL E
Sbjct: 303 KFTYTTLIDGC--CKEGDLDTAFEH 325
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P + + L+ GL G L+ A ++++M +G PD T+ +LI+ CK G+
Sbjct: 259 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 318
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E + + D Y LI + + G +A ++L ++ P Y
Sbjct: 319 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTM 378
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
II ++G E++ GH P+ Y L+
Sbjct: 379 IINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 415
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 77/198 (38%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+ A + + +T ++E + K + Y + + G
Sbjct: 64 LITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 123
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ K G I A + + + G P Y ++ G R G D+ F
Sbjct: 124 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 183
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
S + G P+ Y+ LI + + +A EM GL P F + DG
Sbjct: 184 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGR 243
Query: 196 KNCGKHDLAEKIEQLEVS 213
G+ DLA +I + +S
Sbjct: 244 CKNGRVDLAMEIYKRMLS 261
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS KG P L+ G G L++A + +MI++ D + +LI +C+ G
Sbjct: 294 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 353
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+M + + D TY ++I K G + + +LL + DGH P Y
Sbjct: 354 SVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNV 413
Query: 121 IIKG 124
++ G
Sbjct: 414 LMNG 417
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL AG L+ A++++ +M+ + D D T+ L++ CK G++ +++ ++ + G
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG 464
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+V TY L + K G + A LLH + G Y +I G + G D A
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM 524
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+++ G P+ YTTLI + G A + L EM + G+ P ++++ +G
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF 584
Query: 196 KNCGKHDLAEKI 207
G+ + +K+
Sbjct: 585 CMSGRVEGGKKL 596
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+LV G G + A Q+ N M+++G P++ T+ +L + +CK G+V+ E+ + +
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G + TY LI + KAG +D+A R + ++ G P Y +I + G+ D A
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLME-MTEMGLTPISRCFD 189
E+ G P Y L+ GR VE L+E M E + P + ++
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGR-VEGGKKLLEWMLEKNIHPNATTYN 613
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G N G L SA++ ++M ++G D T+ +LI +C++GE++ ++ +
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
D TY +L+ K G + EAF++ + +V+ G P Y + G ++G A
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
E+ KG N Y +LI + G +A + +M GL P + + D L
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549
Query: 196 KNCGKHDLAEKIEQ 209
G+ D A + Q
Sbjct: 550 CKSGELDRAHDLLQ 563
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 5/195 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L++ L AG +E A+Q+ ++M S PD+ T+ LI C GE+E V++ +
Sbjct: 266 NILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVA 322
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + + Y ++ + G + +A ++ ++V ++Y ++ G +G
Sbjct: 323 RGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVS 382
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A +F E++ KG + YTTLI R G EA L EM L + ++ D
Sbjct: 383 ARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVD 442
Query: 194 GLKNCGKHDLAEKIE 208
G C + +AE +
Sbjct: 443 GY--CKRGKMAEAFQ 455
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 35/228 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
MS+KG + L+ GL AGYL+ A + + M G PD+ T+ +LI+ +CKSGE
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED----------- 109
++ ++ + G + TY +L+ +G ++ +LL ++E
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614
Query: 110 -------GHN-----------------PFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
G+N P + Y +IKG + +A F +E+ KG
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
Y+ LI + + +FVEA +M + G T ++ D
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V L GL G +++A +++++M +G + + T+NSLI +CK+G
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G DV TY LI A+ K+G +D A LL ++++G P Y
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G G+ + + K PN Y +L+ G M
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639
Query: 181 LTPISRCFDLVTDG 194
+ P ++++ G
Sbjct: 640 VEPNENTYNILIKG 653
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Query: 42 DPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFR 101
D ++ ++N L++ +C +G VE +++ ++ S DV TY ILI G ++ A +
Sbjct: 259 DKNVCSYNILLKVLCGAGRVEDARQLFD---EMASPPDVVTYGILIHGYCALGELENAVK 315
Query: 102 LLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCG 161
LL ++V G P ++Y ++ +G+ DA ++ + VYTT+++
Sbjct: 316 LLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFC 375
Query: 162 RGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQLEVSLR 215
G V A + EM GL + + +GL G+ AEK+ Q ++ R
Sbjct: 376 NKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 39/234 (16%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV-- 65
P V +L+ G G LE+A ++++ M+ +G +P+ + S++ +C G V +
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351
Query: 66 ------------EMYYSVCKLGSC---------------------ADVSTYKILIPAVSK 92
E Y+ G C D TY LI + +
Sbjct: 352 VEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411
Query: 93 AGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPV 152
AG + EA ++L ++ + Y ++ G +RG+ +AF + + +G PN
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471
Query: 153 YTTLIT-MCGRGGRFVEAANYLM-EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
YT L +C +G V+AAN L+ EM+ GL + ++ + +GL G D A
Sbjct: 472 YTALSDGLCKQGD--VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQA 523
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 60/141 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K +P + L++ ++S ++ M + +P+ T+N LI+ CK+
Sbjct: 600 MLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARS 659
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + G S+Y LI ++K EA +L H++ ++G P +Y
Sbjct: 660 MKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719
Query: 121 IIKGAFRRGQFDDAFCFFSEI 141
I F + E+
Sbjct: 720 YIDFNFNEDNLEATLALCDEL 740
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V ++LV G+L+ A ++V +M++ G P+L T+N+L + I K E +E+
Sbjct: 487 PNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALEL 546
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ + G DV T+ +I +SK ++EA ++ H + G P +Y I+ G +
Sbjct: 547 LHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCK 606
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
R + D+A F + + G PN Y LI R G EA + L + G+
Sbjct: 607 RHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 90/189 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + ++++ G+ G ++ A+ ++N++ G PD ++ +L++ +C S
Sbjct: 203 MRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKR 262
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + + T+ +LI + GM++ A ++L + E +L
Sbjct: 263 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNI 322
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I ++G+ DDAF F + + G P+ YTT++ R R+ +A L EM
Sbjct: 323 VINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNN 382
Query: 181 LTPISRCFD 189
P F+
Sbjct: 383 CPPNEVTFN 391
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L++ L + G + A +++ M+++G P++ T+ L+E +CK+ E + + + G
Sbjct: 148 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG 207
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY ++I + + G +D+A LL+ L G P Y ++KG ++DD
Sbjct: 208 CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVE 267
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F+E+ K PN + LI RGG A L +MTE + ++V + +
Sbjct: 268 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSI 327
Query: 196 KNCGKHDLAEK 206
G+ D A K
Sbjct: 328 CKQGRVDDAFK 338
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P L++GL + + +++ +M+++ P+ TF+ LI C+ G VE
Sbjct: 242 GCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 301
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+++ + + + + I+I ++ K G +D+AF+ L+N+ G NP Y ++KG
Sbjct: 302 IQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKG 361
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
R +++DA E+ PPN + T I + + G +A + +M E G T
Sbjct: 362 LCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVG 421
Query: 185 SRCFDLVTDGLKNCGKHDLA 204
++ + +G G D A
Sbjct: 422 VVTYNALVNGFCVQGHIDSA 441
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 4/211 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP +++GL A AK+++ +M++ P+ TFN+ I +C+ G
Sbjct: 343 MGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + + + G V TY L+ G ID A L ++ P Y
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTT 459
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + D A +E+ + PPN + L+ + G EA + +M E G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519
Query: 181 LTPISRCFDLVTDGL-KNCGKHDLAEKIEQL 210
TP ++ + DG+ K+C D E + L
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGL 550
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ LV G G+L++A++++ M PD T+ LI +C G V + + + +
Sbjct: 114 NTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR 170
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G +V TY +L+ A+ K ++A +L + G P Y II G R G+ DD
Sbjct: 171 RGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 230
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
A + + G P+ YTTL+ R+ + EM E P FD++
Sbjct: 231 ARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 288
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ GL NA L++A ++V +M+ + P++ TFN L+ C+ G ++ +E+ + + G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
++ TY L ++K ++A LLH LV G +P ++ II + + ++A
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + G P VY ++ + A ++L M G P + ++ +GL
Sbjct: 580 QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGL 639
Query: 196 KNCG 199
G
Sbjct: 640 AREG 643
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
+ G PD+ LI +C+ G + + GS DV Y L+ + G +D
Sbjct: 68 RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
A RL+ ++ P Y P+I+ RG+ DA ++ +G PN YT L+
Sbjct: 128 AARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184
Query: 158 -TMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
MC G F +A L EM G TP ++++ +G+ G+ D A +
Sbjct: 185 EAMCKNSG-FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDL 234
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 5/210 (2%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G V + LV G G+++SA ++ M P+ T+ +L+ +C +
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER 469
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + +V T+ +L+ + G +DEA L+ ++E G P Y
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+ G + +DA + KG P+ ++++I + + R EA ++G
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
+ P + ++ + GL C +H++ I+ L
Sbjct: 590 MRPKALVYNKILLGL--CKRHEIDNAIDFL 617
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ + G ++ A + +N M G +PD ++ ++++ +C++ E+ + +
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVR 380
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
+ T+ I + + G+I++A L+ + E G Y ++ G +G D
Sbjct: 381 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDS 440
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F + K PN YTTL+T R AA + EM P F+++ +
Sbjct: 441 ALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVN 497
Query: 194 GLKNCGKHDLAEKIEQLE 211
C K L E IE +E
Sbjct: 498 FF--CQKGFLDEAIELVE 513
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + L G+ E A ++++ ++ +G PD+ TF+S+I + K
Sbjct: 515 MMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDR 574
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++M++ +G Y ++ + K ID A L +V +G P S Y
Sbjct: 575 VEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYII 634
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKG 145
+I+G R G +A S + +G
Sbjct: 635 LIEGLAREGLLKEAQDLLSMLCSRG 659
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G NP + L++GL L+ A V+ ++ G D + N LI+ CK+ +
Sbjct: 429 METSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKK 488
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E++ + G AD TY LI + G + A L ++ +P +LY
Sbjct: 489 VKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNI 548
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G F A FS + K P+ + TLI G+ R +EA N +M G
Sbjct: 549 MLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRG 608
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
+ P + F + GL + GK LA ++ +
Sbjct: 609 VEPDTLTFKYLISGLLDEGKSTLAYEVWE 637
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + ++ + L L A QMV KM +G+ PD+ T+ +++ +C + +
Sbjct: 254 MDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKK 313
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + K DV + LI + K +DEAF L ++ +Y
Sbjct: 314 FAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNA 373
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G +R G D A+ S ++ G P+ Y L+ G +A + +M G
Sbjct: 374 LISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSG 433
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
+ P ++ + GL C H L
Sbjct: 434 VNPDRYSYNQLLKGL--CKTHQL 454
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 1/211 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P V L+ GL ++ A ++ ++M+ + + +N+LI ++G
Sbjct: 324 MVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGS 383
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D+ TY IL+ GM+++A +L+ + G NP Y
Sbjct: 384 IDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQ 443
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG + Q D AF F S+ G + LI + + A EM G
Sbjct: 444 LLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKG 503
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI-EQL 210
+ + + + +GL + G ++LAE++ EQ+
Sbjct: 504 MQADAVTYGTLINGLFSVGYYNLAEELFEQM 534
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG L+ GL + GY A+++ +M+ DP++ +N ++ +CK G
Sbjct: 499 MGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGH 558
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + D T+ LI + K EA L ++ G P +
Sbjct: 559 FKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKY 618
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+I G G+ A+ + + G +R V LI++
Sbjct: 619 LISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISV 657
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVC-K 73
+L+ G + AG +S + ++M+ G +N I + K+ + VE YY +
Sbjct: 163 ILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDL-VEKYYDMALA 221
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G C TY I A+ ++ I+ LL ++ + G +P I ++ + D
Sbjct: 222 KGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPD 281
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLVT 192
A +++ KG P+ Y T+++ +F EA EM + L P + C L+
Sbjct: 282 ALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIF 341
Query: 193 DGLKNCG---KHDLAEKIEQLEVSL 214
KN +LA ++ L++ L
Sbjct: 342 GLCKNNKVDEAFELASRMLTLDIEL 366
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 64/161 (39%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T++ I +C+S +E E+ + KLG D+ I I + K + +A +++ +
Sbjct: 230 TYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKM 289
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRF 166
G +P Y ++ G +F +A + E+ + P+ LI + +
Sbjct: 290 RTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKV 349
Query: 167 VEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
EA M + + ++ + G G D A KI
Sbjct: 350 DEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKI 390
>gi|15219388|ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis thaliana]
gi|332198129|gb|AEE36250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++Q L A LE A K + G D +T+N+L+ G E+Y S+ K
Sbjct: 249 VIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTD 308
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S D STY+++IP+++K+G +D AF+L + E P S+++ ++ + G+ D +
Sbjct: 309 SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSM 368
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E++ GH P+ ++ +LI + G+ A EM + G P + ++ +
Sbjct: 369 KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESH 428
Query: 196 KNCGKHDLA 204
GK ++A
Sbjct: 429 AKSGKLEVA 437
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+L++ L +G L++A ++ +M ++ P F+SL++++ K+G ++ +++Y +
Sbjct: 317 ELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 376
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G + + LI + +KAG +D A RL + + G P LY II+ + G+ +
Sbjct: 377 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 436
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP-ISRCFDLVT 192
A F +++ G P Y+ L+ M G+ A MT GL P +S L+T
Sbjct: 437 AMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLT 496
Query: 193 DGLKNCGKHDLAEKI 207
L N D+A KI
Sbjct: 497 -LLANKRLVDVAGKI 510
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ LN G A ++ M K S D T+ +I ++ KSG ++ +++ + +
Sbjct: 284 LMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK 343
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S + L+ ++ KAG +D + ++ + GH P +++ +I + G+ D A
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTAL 403
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ E+K G PN +YT +I + G+ A +M + G P + + +
Sbjct: 404 RLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMH 463
Query: 196 KNCGKHDLAEKI 207
G+ D A KI
Sbjct: 464 AGSGQVDSAMKI 475
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++ P LV + AG L+++ ++ +M G P F SLI++ K+G+
Sbjct: 339 MKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + ++ + K G + Y ++I + +K+G ++ A + ++ + G P PS Y+
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++ GQ D A ++ + G P Y +L+T+ A L+EM MG
Sbjct: 459 LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Query: 181 LT 182
+
Sbjct: 519 YS 520
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 16/162 (9%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P L++ +G ++SA ++ N M G P L ++ SL+ +
Sbjct: 444 MEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRL 503
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ ++ + +G DV +L+ + A +D A + L + G +
Sbjct: 504 VDVAGKILLEMKAMGYSVDVCASDVLMIYIKDAS-VDLALKWLRFMGSSGIKTNNFIIRQ 562
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGR 162
+ + + G +D A RP+ TL+ G+
Sbjct: 563 LFESCMKNGLYDSA---------------RPLLETLVHSAGK 589
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ G AG ++ AK++ ++M+K+G P++ T+N+LI+ CK V+ V ++ + + G
Sbjct: 281 VIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREG 340
Query: 76 SCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
C+ +V T+ ++I + G ++ A + + E G Y +I+ G+ +
Sbjct: 341 VCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKG 400
Query: 135 FCFFSEIKIKGHPPNRPVYTTLIT---MCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
F ++ PN Y LI+ + + V A LMEM E G P F+ V
Sbjct: 401 LEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRV 460
Query: 192 TDGLKNCGKHDLAEKIEQLE 211
+GL G D A+ I +++
Sbjct: 461 LNGLVITGNQDFAKDILRMQ 480
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M P + +L + + G A + M + G DL +FN+L++ +CKS
Sbjct: 127 MRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNR 186
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
VE ++ ++ K D +Y IL A R+L +V+ G P Y
Sbjct: 187 VETAHDLLRTL-KSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNT 245
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++KG FR Q +A+ F+ E+K + + YTT+I G G +A EM + G
Sbjct: 246 MLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEG 305
Query: 181 LTP 183
+ P
Sbjct: 306 VAP 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P ++L G A +++ +M+++G +P + T+N++++ +S +++
Sbjct: 201 FRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAW 260
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
E Y + K DV +Y +I +AG + +A R+ +V++G P + Y +I+
Sbjct: 261 EFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVF 320
Query: 126 FRRGQFDDAFCFFSEIKIKGH-PPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
++ +A F E+ +G PN + +I G A ++ M E GL
Sbjct: 321 CKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRAS 380
Query: 185 SRCFDLV 191
+ +++V
Sbjct: 381 VQTYNVV 387
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
+P V +++++GL + G +E A + +M + G ++T+N +I C +GE+E +E
Sbjct: 343 SPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLE 402
Query: 67 MYYSVCKLGSCADVSTYKILIPAV---SKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIK 123
++ + ++ TY +LI A+ K+ + A +LL +VE G P + ++
Sbjct: 403 VFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLN 462
Query: 124 GAFRRGQFDDA 134
G G D A
Sbjct: 463 GLVITGNQDFA 473
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V ++LV+ L G+ + A ++ M G DP+ T+N+L+ C++GE
Sbjct: 148 MLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGE 207
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + + + G ++ T+ ++ + KAG +++A ++ +V++G P Y
Sbjct: 208 VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNT 267
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ G + G +A F+E+ KG P+ +T+LI + + G A + EM E G
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 181 LTPISRCFDLVTDG 194
L F + DG
Sbjct: 328 LQMNEITFTALIDG 341
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + + +V G+ AG +E A+++ ++M+K+G PD ++N+L+ CK G
Sbjct: 218 MREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGC 277
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + + G DV T+ LI + KAG ++ A L+ + E G +
Sbjct: 278 SHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTA 337
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G DDA E++ P+ Y LI GR EA + EM G
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 181 LTP 183
+ P
Sbjct: 398 VKP 400
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P + LV AG ++ A+++V+ M + G P+L TFNS++ ICK+G
Sbjct: 183 MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR 242
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E +++ + K G D +Y L+ K G EA + + G P +
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTS 302
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I + G + A E++ +G N +T LI + G +A + EM +
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P C++ + +G G+ D A ++
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEAREL 389
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ P V + ++ L +A L SA++ + M+ G P++ T+N L+ +C G +
Sbjct: 118 GYAPSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ + + G + TY L+ A +AG +D A RL+ + E G P + ++ G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ +DA F E+ +G P+ Y TL+ + G EA + EMT G+ P
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
P V + L+ G G ++ A+++V +M +G PD+ T+++++ CK+G+
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + + G D TY LI + + + +A L N++ G P Y +I G
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ G + A E+ G P+ Y+ LI + R EA L ++ P +
Sbjct: 483 CKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPAN 542
Query: 186 RCFDLVTDGLKN 197
+D + +N
Sbjct: 543 IKYDALMRCCRN 554
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + LV G G A + +M ++G PD+ TF SLI +CK+G
Sbjct: 253 MVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN 312
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + + G + T+ LI K G +D+A + + + P Y
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNA 372
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ D+A E++ KG P+ Y+T+++ + G A +M E G
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432
Query: 181 LTP 183
+ P
Sbjct: 433 VLP 435
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ G G+L+ A V +M + P + +N+LI C G ++ E+ + G
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
DV TY ++ A K G AF+L ++E+G P Y+ +I+ + DA
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
F + G P+ YT+LI + G A + EM + G+ P + ++ +GL
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517
Query: 196 KNCGKHDLAEKI 207
+ A+++
Sbjct: 518 SKSARTKEAQRL 529
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 15/200 (7%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P L++ L L A + MI G PD T+ SLI+ CK G
Sbjct: 428 MLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGN 487
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY-- 118
VE + ++ + K G DV TY +LI +SK+ EA RLL L + P Y
Sbjct: 488 VERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDA 547
Query: 119 -------------APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
++KG +G ++A + I + + VY+ LI R G
Sbjct: 548 LMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGN 607
Query: 166 FVEAANYLMEMTEMGLTPIS 185
++A ++ +M + G P S
Sbjct: 608 VMKALSFHKQMLQCGFAPNS 627
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G V Y ++ A+S A + A R +++ DG P Y +++ RG +A
Sbjct: 118 GYAPSVLAYNAVLLALSDASL-PSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+++ G PN Y TL+ R G A + M E GL P F+ V +G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 195 LKNCGKHDLAEKI 207
+ G+ + A K+
Sbjct: 237 ICKAGRMEDARKV 249
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 40 GSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEA 99
G P + +N+++ + + + S+ G +V TY IL+ A+ G EA
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 100 FRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITM 159
+L ++ G +P Y ++ R G+ D A ++ G PN + +++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 160 CGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ GR +A EM + GL P ++ + G
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGG 271
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%)
Query: 3 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE 62
D+ +N +L+ G G + A +M++ G P+ + SLI + + G V
Sbjct: 585 DRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVV 644
Query: 63 FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
++ + S AD K LI K G +D +LH + DG P P
Sbjct: 645 EADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPSP 697
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + +V+ G LE ++ +M +G PD+ ++N LIE K G
Sbjct: 280 MIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGS 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + G + STY IL+ K G D+ L + E P + Y
Sbjct: 340 IKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNI 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G F + F ++ + PN Y L+ CG+GG +A L M G
Sbjct: 400 LIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKG 459
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S+ + + + +D A
Sbjct: 460 IVPSSKAYSGLIEAYGQAALYDEA 483
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ G + A+ + MI+ G P++ T++ ++ET K G+
Sbjct: 245 MRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGK 304
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D+S+Y +LI A +K G I EA + + G P S Y+
Sbjct: 305 LEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSI 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G++DD F ++K P+ Y LI + G GG F E ++ +
Sbjct: 365 LLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDEN 424
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G H+ A+KI
Sbjct: 425 IDPNMETYEGLVFACGKGGLHEDAKKI 451
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ G + +++ +M + ++PD T+N LI + G
Sbjct: 350 MQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V +++ + ++ TY+ L+ A K G+ ++A ++L ++ G P Y+
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSG 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + +D+A F+ + G Y +LI RGG + E L M E G
Sbjct: 470 LIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYG 529
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
++ ++ F + +G + G+++ A K
Sbjct: 530 ISRNAKSFSGIIEGYRQSGQYEEAIK 555
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
N RG DL +GLL + +M +G PDL T+N+L+ G +
Sbjct: 226 NACARG-DLDWEGLLG---------LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEM 275
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + G +++TY ++ K G +++ LL + +G+ P S Y +I+
Sbjct: 276 VFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHA 335
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G +A F +++ G PN Y+ L+ + G+ GR+ + ++M E P +
Sbjct: 336 KLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDAT 395
Query: 187 CFDLV 191
++++
Sbjct: 396 TYNIL 400
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 74/179 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P ++L++ GY + + + ++ + DP++ET+ L+ K G
Sbjct: 385 MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGL 444
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + + G Y LI A +A + DEA + + E G Y
Sbjct: 445 HEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNS 504
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I R G + + S ++ G N ++ +I + G++ EA +EM +M
Sbjct: 505 LIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKM 563
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D+ +P + + LV G E AK+++ M +G P + ++ LIE ++
Sbjct: 420 LVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAAL 479
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + ++ ++GS + + TY LI ++ G+ E +L + E G + ++
Sbjct: 480 YDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSG 539
Query: 121 IIKGAFRRGQFDDA-------------------------FCF----------FSEIKIKG 145
II+G + GQ+++A +CF F EIK G
Sbjct: 540 IIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASG 599
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
P+ Y ++ + + GR+ +A+ L EM + ++ I + + G
Sbjct: 600 ILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKG 648
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P+ + +I + + G +E C E++ + G V +Y LI A + G + + L
Sbjct: 146 PNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLEL 205
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFD--DAFCFFSEIKIKGHPPNRPVYTTLITMC 160
L + + +P Y +I A RG D F+E++ +G P+ Y TL++ C
Sbjct: 206 LERMKRERVSPNILTYNTVIN-ACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSAC 264
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
G EA M E G+ P + + + GK
Sbjct: 265 AARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGK 304
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G + + +++G +G E A + +M K + D +T ++ C +G
Sbjct: 525 MREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGL 584
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E + + G V Y +++ +K G D+A LL +++ + +
Sbjct: 585 VDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQ 644
Query: 121 IIKGAFRRGQFDDAFCF------FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+IK G +DD + F ++ +G Y TL+ G+ AA L
Sbjct: 645 MIK-----GDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLT 699
Query: 175 EMTEMGLTP 183
E T+ GL P
Sbjct: 700 EATKRGLFP 708
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL ++ ++ ++M+ G P+ TF +LI+ CK+G
Sbjct: 201 MQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGR 260
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 261 VDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 320
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + AF + + + + YT LI+ + GR V+A L EM +G
Sbjct: 321 LIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 380
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 381 LKPEIGTYTMIINEF--CKKGDV 401
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L ++ M G PD+ T++ LI +CK +
Sbjct: 166 ITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESK 225
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E++ + G + T+ LI K G +D A + ++ +P Y
Sbjct: 226 MDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNT 285
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 286 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKEN 345
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 346 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + CK GE+
Sbjct: 101 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQ 160
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G ++E FRL + G P Y+ +I G
Sbjct: 161 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGL 220
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + DD F E+ G PN +TTLI + GR A +M L+P
Sbjct: 221 CKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 280
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 281 VTYNTLIYGL--CKKGDLKQ 298
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ + ++L+ G + A+ + + + K G P + +FN+L+ K G++
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEX 194
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+ ++ G DV TY +LI + K +D+ L +++ G P + +I G
Sbjct: 195 FRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDG 254
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ G+ D A + ++ + P+ Y TLI + G +A + + EM+ GL P
Sbjct: 255 HCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 314
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
+ + DG +C + DL E
Sbjct: 315 KITYTTLIDG--SCKEGDLETAFE 336
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G ++ A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 236 MLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGD 295
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ AF ++++ Y
Sbjct: 296 LKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTA 355
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + + EM G
Sbjct: 356 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 415
Query: 181 LTPISRCFDLVTDG 194
P ++++ +G
Sbjct: 416 YVPSVVTYNVLMNG 429
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 44/239 (18%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG--SDPDLETFNSLIET-ICK 57
M NP + + ++ GL +G LE A++++ +MI++G S PD+ T+N+LI ICK
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182
Query: 58 SGEVEFCVEMY-------------------YSVCKLG------------SCA-DVSTYKI 85
G+VE +E+ +++C G SC+ D+ T+
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNT 242
Query: 86 LIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKG 145
L+ KAGM+ A +L + + P Y ++ G R GQ AF EI +G
Sbjct: 243 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 302
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANY---------LMEMTEMGLTPISRCFDLVTDGL 195
+ P+ YT+L+ + G EA L EM + + P +++V GL
Sbjct: 303 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGL 361
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
PP+ ++++ GL+ G + A +++ ++ +G PD+ T+N+LI+ +CK+ V ++
Sbjct: 349 PPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 408
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ LG + T ++ + + G +D+A+ L+ + H P +Y +I G +
Sbjct: 409 ADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 468
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ DDA ++ +G + Y LI GGR EA EM G P
Sbjct: 469 SDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLP 524
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLE---------SAKQMVNKMIKQGSDPDLETFNSLIET 54
+G+ P V LV GL +G +E SA++++ +M+ P L T+N ++
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGG 360
Query: 55 ICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPF 114
+ K G + V + + G DV TY LI + KA + EA L + G P
Sbjct: 361 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPN 420
Query: 115 PSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
++ G R G+ DDA+ E+ K H PN VYT+LI + R +A L
Sbjct: 421 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLD 480
Query: 175 EMTEMGLT 182
M G+
Sbjct: 481 AMRGQGVA 488
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 21/235 (8%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V + ++ L AG + A +++ M PDL TFN+L++ CK+G
Sbjct: 196 MKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGM 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ +E+ +C+ DV TY IL+ + + G + AF LL +V G+ P Y
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 312
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNR-------PVYTTLITMCG--RGGRFVEAAN 171
++ G + G+ ++A E+ + P++T I + G + G +A +
Sbjct: 313 LVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 372
Query: 172 YLMEMTEMGLTPISRCFDLVTDGLKNCGKH----DLAEKIEQL-----EVSLRSV 217
+ ++ G P ++ + DGL + DLA+++ L +V+L SV
Sbjct: 373 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSV 427
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVE----- 62
P V +LV GL G ++ A ++ ++++QG PD+ + SL++ +CKSGE+E
Sbjct: 270 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 329
Query: 63 ----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLY 118
E+ + + + TY I++ + K G I +A L+ +LV G+ P Y
Sbjct: 330 VKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 389
Query: 119 APIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTE 178
+I G + + +A E+ G PN +++ R GR +A + ++EM+
Sbjct: 390 NTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 449
Query: 179 MGLTPISRCFDLVTDGLKNCGKHDLA 204
P + + DGL + D A
Sbjct: 450 KRHAPNVVVYTSLIDGLCKSDRMDDA 475
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G+ V + L+ L+ +G+ ++ ++ G P+L TF LI CK+G+
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
+E ++ + DV + LI + K G D+A +L N+ NP Y +I G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141
Query: 125 AFRRGQFDDAFCFFSEIKIKG--HPPNRPVYTTLIT--MCGRGGRFVEAANYLMEMTEMG 180
+ G + A E+ +G P+ Y TLI +C + G EA L M G
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC-KDGDVEEALEILDGMKLAG 200
Query: 181 LTPISRCFDLVTDGLKNCGK 200
P ++ + L G+
Sbjct: 201 PAPDVITYNSIIHALCVAGR 220
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 5/177 (2%)
Query: 38 KQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMID 97
+ G D+ ++N L++ + KSG ++Y + G ++ T+KILI KAG
Sbjct: 20 QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79
Query: 98 EAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLI 157
A L L E P ++ +I G F+ G D A F ++ P+ Y T+I
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139
Query: 158 TMCGRGGRFVEAANYLMEMTEMG---LTPISRCFDLVTDGLKNCGKHDLAEKIEQLE 211
+ + G +A L EM G I L+ G+ C D+ E +E L+
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGI--CKDGDVEEALEILD 194
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V GL G ++ A +V +M ++ P++ + SLI+ +CKS ++ + ++ G
Sbjct: 427 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQG 486
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
D Y+ LI ++ G + EA + +V G P S + + A F+
Sbjct: 487 VALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 543
>gi|125528712|gb|EAY76826.1| hypothetical protein OsI_04786 [Oryza sativa Indica Group]
Length = 564
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL N +E A++++ +M+ G P FN +I + K+GE+E + + G
Sbjct: 370 VIHGLCNTNNVEDARKVLMRMVNLGPAPGSAVFNFVITALSKNGEMEDAKGLMRVMENQG 429
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSL----YAPIIKGAFRRGQF 131
C D+ TY +++ +K GM+DEA H L+ D P L Y +I+G + +F
Sbjct: 430 ICPDIYTYSVIMSGYAKGGMMDEA----HALLRDAKRIHPRLSRVTYHTLIRGYCKMEEF 485
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLI-TMCGRGGRFVEAANYLMEMTEMGL 181
+ A E+K G PN Y LI ++C + + A N L EM + GL
Sbjct: 486 EKALECLKEMKEDGMEPNMDEYNKLIQSLCLKALDWRTAENLLKEMEDGGL 536
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 1/163 (0%)
Query: 46 ETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHN 105
+ N L+ K + + +E + +LG D +Y + I A + M+D A+R+
Sbjct: 224 QVLNKLLAMFWKLEKSKAALEAFDMFSELGCAPDGDSYYLAIQAAGRKSMVDAAWRVCDG 283
Query: 106 LVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGR 165
++ G P I+ ++ + +A + K K T L++ R
Sbjct: 284 MISSGCFPDGEKVGDIVMFFCKKKKVKEAHSVYITAKEKKVQAPTSALTFLVSALARNDE 343
Query: 166 FVEAANYLMEMTE-MGLTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ A L+E + L + + V GL N + A K+
Sbjct: 344 TINTALELLEEYQGESLKDAGQSYAAVIHGLCNTNNVEDARKV 386
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P + + L+ G A + A ++ +M ++G +P+ ++ LI+++CK
Sbjct: 261 MKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHER 320
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E ++ + + G AD+ TY LI K G I + LL +++ GH P +Y
Sbjct: 321 LEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQH 380
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ ++ + ++ +E++ G P+ +Y T+I + + G E EM G
Sbjct: 381 IMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSG 440
Query: 181 LTPISRCFDLVTDGLKNCG 199
L+P F ++ +G G
Sbjct: 441 LSPSIDTFVIMINGFLEQG 459
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P +L+Q L LE A ++ +M + G DL T+++LI CK G+
Sbjct: 296 MRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGK 355
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + + G + Y+ ++ A K ++E L++ + + G P S+Y
Sbjct: 356 IKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNT 415
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ A + G+ + ++E++ G P+ + +I G VEA Y EM G
Sbjct: 416 VIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRG 475
Query: 181 L 181
L
Sbjct: 476 L 476
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
+ P V+ L+ G G L AK ++ +M G +PD+ +N+L+ ++ ++
Sbjct: 231 WKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAY 290
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ + + G + ++Y +LI ++ K ++EA R+ + +G Y+ +I G
Sbjct: 291 DLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGF 350
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ G+ + E+ +GH PN+ +Y ++ + E + EM ++G P
Sbjct: 351 CKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAP 408
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L++ +A + A Q++++M G +PD F L++ + K+G V+ ++ + +
Sbjct: 171 ILMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEEL-RY 229
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
V + L+ K G + EA +L + + G P +Y ++ G + + DA
Sbjct: 230 RWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDA 289
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ E++ KG PN YT LI + R EA +EM G + + G
Sbjct: 290 YDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISG 349
Query: 195 LKNCGK 200
GK
Sbjct: 350 FCKWGK 355
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P V +L+ GL +E A ++ +M+ G P+ TF +LI+ CK+G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V +E+Y + D+ TY LI + K G + +A L+ + G P Y
Sbjct: 257 VXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G+ + G + A + + + + YT LI+ + GR V+A L EM +G
Sbjct: 317 LIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 181 LTPISRCFDLVTDGLKNCGKHDL 203
L P + ++ + C K D+
Sbjct: 377 LKPEIGTYTMIINEF--CKKGDV 397
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ G P V + L+ G + G L+ ++ N M G PD+ T++ LI +CK +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E++ + G + T+ LI K G + A + ++ +P Y
Sbjct: 222 MEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNT 281
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G ++G A E+ +KG P++ YTTLI + G A Y M +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKEN 341
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI--EQLEVSLR 215
+ + + GL G+ AEK+ E L V L+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 6 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCV 65
F P +++ L+ Y + + ++ G L FN L+ + K GE+
Sbjct: 97 FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156
Query: 66 EMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGA 125
++ ++ K G V ++ L+ K G +DE FRL + + G P Y+ +I G
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 126 FRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPIS 185
+ + +DA F E+ G PN +TTLI + GR A +M L+P
Sbjct: 217 CKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDL 276
Query: 186 RCFDLVTDGLKNCGKHDLAE 205
++ + GL C K DL +
Sbjct: 277 ITYNTLIYGL--CKKGDLKQ 294
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L+ + G + A+ + + + K G P + +FN+L+ K G+++ + ++
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G DV TY +LI + K +++A L ++++G P + +I G + G+
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXL 259
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A + ++ + P+ Y TLI + G +A + + EM+ GL P + + D
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 194 GLKNCGKHDL 203
G +C + DL
Sbjct: 320 G--SCKEGDL 327
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D G P L+ G G + A ++ +M+ Q PDL T+N+LI +CK G+
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++ + G D TY LI K G ++ A ++++ Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTA 351
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ DA E+ G P YT +I + G + L EM G
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 181 LTP 183
P
Sbjct: 412 YVP 414
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + +P + + L+ GL G L+ A+ ++++M +G PD T+ +LI+ CK G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + K D Y LI + + G +A ++L ++ G P Y
Sbjct: 327 LETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPN 149
II ++G E++ G+ P+
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
L+ L +G+L A + + +T ++E + K + Y + G
Sbjct: 72 LIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
A + + IL+ + K G I A + + + G P + ++ G + G D+ F
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGL 195
+ ++ G P+ Y+ LI + + +A EM + GL P F + DG
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGH 251
Query: 196 KNCGKHDLAEKI 207
G+ LA +I
Sbjct: 252 CKNGRVXLAMEI 263
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ P + ++L+ L G LE A+ +V M + D+ T+N+LI +C+ G
Sbjct: 65 MATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGN 124
Query: 61 VEFCVE------------------MYYSVC---------------------KLGSCADVS 81
F VE + Y+V + G D+
Sbjct: 125 GRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLV 184
Query: 82 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEI 141
TY +LI +KAGM+D+A L + G P Y ++ G + G+ ++A F+E+
Sbjct: 185 TYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEM 244
Query: 142 KIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGL 181
K +G PN YT++ C + GR +A YL+EM + GL
Sbjct: 245 KARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL 284
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M DKG P +++ LL E A+++++ M + G DL T+N LI K+G
Sbjct: 139 MVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGM 198
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + G DV TY ++ KAG ++EA +L + G P Y
Sbjct: 199 MDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTS 258
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I + G+ DA + E++ +G + Y LI+ + G+ L EM E G
Sbjct: 259 ITDACLKAGRMQDAHAYLVEMRKEG-LVDAISYVALISTICKLGKGKLGFQLLREMLEKG 317
Query: 181 LTPISRCFDLVTDGL 195
P F++V + L
Sbjct: 318 FKPNLVTFNVVFEAL 332
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 4/198 (2%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++++ L G + A +++ M PD+ T+N LI +CK G +E + +
Sbjct: 43 NIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQA 102
Query: 74 LGSCADVSTYKILIPAVSKAG----MIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
D+ TY LI + + G ++ AFRL +V+ GH P Y +I R
Sbjct: 103 RDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVK 162
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+ A + G + Y LI + G +A + +EM G P ++
Sbjct: 163 MDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYN 222
Query: 190 LVTDGLKNCGKHDLAEKI 207
V DG GK + A K+
Sbjct: 223 SVVDGFCKAGKVEEANKL 240
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
+V+G G A ++ M + + +N ++ +CK G+ + +++ +S+
Sbjct: 10 IVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTS 69
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG----QF 131
D+ TY ILI A+ K G +++A L+ + Y +I G R+G +
Sbjct: 70 CAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNGRFRV 129
Query: 132 DDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLV 191
+ AF F E+ KGH P YT +I R +A L M E G FDLV
Sbjct: 130 ERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCA-----FDLV 184
Query: 192 T 192
T
Sbjct: 185 T 185
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 47 TFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNL 106
T+++++ C+ GE + + + A+ Y I++ + K G EA LLH++
Sbjct: 6 TYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSM 65
Query: 107 VEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRG-G 164
P Y +I + G+ +DA ++ + P + Y TLI +C +G G
Sbjct: 66 ATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNG 125
Query: 165 RF-VEAANYLM-EMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQL 210
RF VE A L EM + G TP S + +V D L + A+K+ L
Sbjct: 126 RFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDL 173
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + +V G AG +E A ++ +M +G P+ T+ S+ + K+G
Sbjct: 209 MPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGR 268
Query: 61 VE----FCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPS 116
++ + VEM + D +Y LI + K G F+LL ++E G P
Sbjct: 269 MQDAHAYLVEM-----RKEGLVDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLV 323
Query: 117 LYAPIIKGAFRRGQFDDA 134
+ + + + DDA
Sbjct: 324 TFNVVFEALSKESNTDDA 341
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
+ +++ L + G +E A + M K G D +T+ +L+ CK+ + +++ +
Sbjct: 63 NTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQ 122
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D Y +I A+ K +++A +L+ +++ G P +Y +IKG + DD
Sbjct: 123 KGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDD 182
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTD 193
A F E+ PP+ Y LI +G RF EA + + EM E GL P + L+
Sbjct: 183 AIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMK 242
Query: 194 GL 195
GL
Sbjct: 243 GL 244
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M+ GF + LV G Y+ + Q++ ++G D ++++I +CK +
Sbjct: 85 MAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQKGGVLDAFAYSAMINALCKEAK 144
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E V + + K G + Y LI + A +D+A R+ H + P Y
Sbjct: 145 LEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSPPDIVTYNI 204
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G F+ +F +A+ E+ KG P+ Y+ L+ G + A ++T+ G
Sbjct: 205 LINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKG 264
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
P + +++ GL + GK LA
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQLA 288
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ L LE A ++N MIK G P+ +N+LI+ + + +++ + +++ +
Sbjct: 135 MINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTH 194
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
S D+ TY ILI + K EA+ L+ ++E G +P Y+ ++KG + + A
Sbjct: 195 SPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMAL 254
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
++++ KG P+ ++ LI G+ A + ++M P
Sbjct: 255 QLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAP 302
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG +P V LL++GL +E A Q+ N++ K+G PD++ N LI +C G+
Sbjct: 225 MLEKGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + +Y + + ++ T L+ K G I A + ++ + P Y
Sbjct: 285 TQLALSLYLDMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWARILRNELQPDIISYNI 344
Query: 121 IIKGAFRRGQFDDAFCFFSE 140
+KG + DA F +
Sbjct: 345 TLKGLCSCNRISDAILFLHD 364
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L++GL+ A L+ A ++ ++M S PD+ T+N LI + K
Sbjct: 155 MIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSPPDIVTYNILINGLFKGDR 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V TY +L+ + ++ A +L + + + G P ++
Sbjct: 215 FGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNI 274
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ A + ++ PN TL+ + G A +
Sbjct: 275 LIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWARILRNE 334
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P +++ GL +C +
Sbjct: 335 LQPDIISYNITLKGLCSCNR 354
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/185 (17%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVST 82
+G ++ A+++ ++++ PD +N+++ ++G +E C E++ + + G V++
Sbjct: 3 SGNIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREGR-RSVAS 61
Query: 83 YKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIK 142
+ +I + G ++EA + + + G Y ++ G + + + +
Sbjct: 62 FNTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAE 121
Query: 143 IKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHD 202
KG + Y+ +I + + +A L M + G P + ++ + GL K D
Sbjct: 122 QKGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLD 181
Query: 203 LAEKI 207
A ++
Sbjct: 182 DAIRV 186
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
++ KGF P V+ ++L+ GL + G + A + M + P+L T N+L++ K G
Sbjct: 260 VTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMQGFYKDGN 319
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 107
+ + ++ + + D+ +Y I + + I +A LH+ V
Sbjct: 320 IRNALVIWARILRNELQPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 92 KAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRP 151
++G ID A R+ ++VE +P +Y ++ G +R G+ +D F + ++ G R
Sbjct: 2 ESGNIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELW---EMMGREGRRS 58
Query: 152 V--YTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEQ 209
V + T+I + G+ EA + M + G S+ + + +G C + + ++
Sbjct: 59 VASFNTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGF--CKNRYINKSLQV 116
Query: 210 LEVS 213
LE++
Sbjct: 117 LEIA 120
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Query: 56 CKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
C+SG ++ +Y + + D Y ++ +AG I++ F L + +G
Sbjct: 1 CESGNIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREGRRSVA 60
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLM 174
S + +I+ F G+ ++A + G + Y TL+ C R++ + ++
Sbjct: 61 S-FNTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKN--RYINKSLQVL 117
Query: 175 EMTE 178
E+ E
Sbjct: 118 EIAE 121
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P + +V+ G LE ++ +M +G PD+ ++N LIE K G
Sbjct: 280 MIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGS 339
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ ++++ + G + STY IL+ K G D+ L + E P + Y
Sbjct: 340 IKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNI 399
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ G F + F ++ + PN Y L+ CG+GG +A L M G
Sbjct: 400 LIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKG 459
Query: 181 LTPISRCFDLVTDGLKNCGKHDLA 204
+ P S+ + + + +D A
Sbjct: 460 IVPSSKAYSGLIEAYGQAALYDEA 483
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P + + L+ G + A+ + MI+ G P++ T++ ++ET K G+
Sbjct: 245 MRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGK 304
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G D+S+Y +LI A +K G I EA + + G P S Y+
Sbjct: 305 LEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSI 364
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++ + G++DD F ++K P+ Y LI + G GG F E ++ +
Sbjct: 365 LLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDEN 424
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P ++ + G H+ A+KI
Sbjct: 425 IDPNMETYEGLVFACGKGGLHEDAKKI 451
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P +L+ G + +++ +M + ++PD T+N LI + G
Sbjct: 350 MQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ V +++ + ++ TY+ L+ A K G+ ++A ++L ++ G P Y+
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSG 469
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ + +D+A F+ + G Y +LI RGG + E L M E G
Sbjct: 470 LIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYG 529
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEK 206
++ ++ F + +G + G+++ A K
Sbjct: 530 ISRNAKSFSGIIEGYRQSGQYEEAIK 555
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 7 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVE 66
N RG DL +GLL + +M +G PDL T+N+L+ G +
Sbjct: 226 NACARG-DLDWEGLLG---------LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEM 275
Query: 67 MYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAF 126
++ ++ + G +++TY ++ K G +++ LL + +G+ P S Y +I+
Sbjct: 276 VFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHA 335
Query: 127 RRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISR 186
+ G +A F +++ G PN Y+ L+ + G+ GR+ + ++M E P +
Sbjct: 336 KLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDAT 395
Query: 187 CFDLV 191
++++
Sbjct: 396 TYNIL 400
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 74/179 (41%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + P ++L++ GY + + + ++ + DP++ET+ L+ K G
Sbjct: 385 MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGL 444
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
E ++ + + G Y LI A +A + DEA + + E G Y
Sbjct: 445 HEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNS 504
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
+I R G + + S ++ G N ++ +I + G++ EA +EM +M
Sbjct: 505 LIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKM 563
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+ D+ +P + + LV G E AK+++ M +G P + ++ LIE ++
Sbjct: 420 LVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAAL 479
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + ++ ++GS + + TY LI ++ G+ E +L + E G + ++
Sbjct: 480 YDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSG 539
Query: 121 IIKGAFRRGQFDDA-------------------------FCF----------FSEIKIKG 145
II+G + GQ+++A +CF F EIK G
Sbjct: 540 IIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASG 599
Query: 146 HPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
P+ Y ++ + + GR+ +A+ L EM + ++ I + + G
Sbjct: 600 ILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKG 648
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 43 PDLETFNSLIETICKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRL 102
P+ + +I + + G +E C E++ + G V +Y LI A + G + + L
Sbjct: 146 PNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLEL 205
Query: 103 LHNLVEDGHNPFPSLYAPIIKGAFRRGQFD--DAFCFFSEIKIKGHPPNRPVYTTLITMC 160
L + + +P Y +I A RG D F+E++ +G P+ Y TL++ C
Sbjct: 206 LERMKRERVSPNILTYNTVIN-ACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSAC 264
Query: 161 GRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGK 200
G EA M E G+ P + + + GK
Sbjct: 265 AARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGK 304
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G + + +++G +G E A + +M K + D +T ++ C +G
Sbjct: 525 MREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGL 584
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ E + + G V Y +++ +K G D+A LL +++ + +
Sbjct: 585 VDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQ 644
Query: 121 IIKGAFRRGQFDDAFCF------FSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLM 174
+IK G +DD + F ++ +G Y TL+ G+ AA L
Sbjct: 645 MIK-----GDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLT 699
Query: 175 EMTEMGLTP 183
E T+ GL P
Sbjct: 700 EATKRGLFP 708
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF+P V + L+ + G LE A + M ++G PDL ++ SL+ +C+ G
Sbjct: 286 MEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGR 345
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++++ + G DV Y LI A K GM+ EA LLH ++ G +P
Sbjct: 346 VREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRI 405
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ A EI+ G +Y LI R R A + L + E
Sbjct: 406 LVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDS 465
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S ++ + + C ++++E +
Sbjct: 466 FQPDSDIYNKLIESF--CRSNNVSEAL 490
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L L G + + KM ++G DPD+ T+N+LI++ + G +E +Y + +
Sbjct: 264 NILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYR 323
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ +Y L+ + + G + EA +L H +++ G +P LY +I + G +
Sbjct: 324 RGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQE 383
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
A E+ G P+ L+ GR GR + A N ++E+ ++G+T
Sbjct: 384 ARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVT 432
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+NP + ++L++ + + + KM+K G P++ N ++ + K C
Sbjct: 187 NWNPVIF--EMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQC 244
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y + ++G ++ T+ IL + + G +++ L + E+G +P Y +I
Sbjct: 245 WELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDS 304
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
RRG+ +DAF + + +G P+ YT+L+ R GR EA M + G+ P
Sbjct: 305 YVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDP 363
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P V + L+ G L+ A+ ++++MI G PD T L+E + G
Sbjct: 356 MIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGR 415
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + KLG YK LI ++ + A LL ++ED P +Y
Sbjct: 416 LISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNK 475
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R +A E+ + + P Y +LI R V+ ++EM E
Sbjct: 476 LIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESE 535
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + +G G D AE +
Sbjct: 536 VIPDHEICRALVNGYCKEGNADKAESL 562
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P V + ++ GL ++ +M + G + TFN L +C+ G+
Sbjct: 216 MVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGD 275
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G DV TY LI + + G +++AF L + G P Y
Sbjct: 276 VNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTS 335
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ +A F + +G P+ +Y TLI + G EA + L EM +G
Sbjct: 336 LMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIG 395
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQLEVSL 214
+ P S ++ +G G+ +L +I++L V++
Sbjct: 396 IHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTV 433
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++GF+P V + L+ + G LE A + M ++G PDL ++ SL+ +C+ G
Sbjct: 282 MEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGR 341
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V ++++ + G DV Y LI A K GM+ EA LLH ++ G +P
Sbjct: 342 VREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRI 401
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ A EI+ G +Y LI R R A + L + E
Sbjct: 402 LVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDS 461
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P S ++ + + C ++++E +
Sbjct: 462 FQPDSDIYNKLIESF--CRSNNVSEAL 486
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCK 73
++L L G + + KM ++G DPD+ T+N+LI++ + G +E +Y + +
Sbjct: 260 NILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYR 319
Query: 74 LGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDD 133
G D+ +Y L+ + + G + EA +L H +++ G +P LY +I + G +
Sbjct: 320 RGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQE 379
Query: 134 AFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLT 182
A E+ G P+ L+ GR GR + A N ++E+ ++G+T
Sbjct: 380 ARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVT 428
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
+NP + ++L++ + + + KM+K G P++ N ++ + K C
Sbjct: 183 NWNPVIF--EMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQC 240
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E+Y + ++G ++ T+ IL + + G +++ L + E+G +P Y +I
Sbjct: 241 WELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDS 300
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
RRG+ +DAF + + +G P+ YT+L+ R GR EA M + G+ P
Sbjct: 301 YVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDP 359
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M D+G +P V + L+ G L+ A+ ++++MI G PD T L+E + G
Sbjct: 352 MIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGR 411
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ + + + KLG YK LI ++ + A LL ++ED P +Y
Sbjct: 412 LISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNK 471
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I+ R +A E+ + + P Y +LI R V+ ++EM E
Sbjct: 472 LIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESE 531
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + +G G D AE +
Sbjct: 532 VIPDHEICRALVNGYCKEGNADKAESL 558
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M GF P V + ++ GL ++ +M + G + TFN L +C+ G+
Sbjct: 212 MVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGD 271
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V + + G DV TY LI + + G +++AF L + G P Y
Sbjct: 272 VNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTS 331
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+++G R G+ +A F + +G P+ +Y TLI + G EA + L EM +G
Sbjct: 332 LMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIG 391
Query: 181 LTPISRCFDLVTDGLKNCGK----HDLAEKIEQLEVSL 214
+ P S ++ +G G+ +L +I++L V++
Sbjct: 392 IHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTV 429
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +GF P + ++ + GL G L+ A ++V KM+ G PD T+ S+I +G
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + G V TY +LI + + G + A + E G +P Y
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 592
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + + D A+ FF+E++ KG PN+ YT LI G + EA +M +
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 652
Query: 181 LTPIS 185
+ P S
Sbjct: 653 IQPDS 657
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G +P ++LV GL ++G +E AK+++ M++ G + + T++ LI C+ G+
Sbjct: 228 MQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQ 287
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + + G+ V TY ++ + K G + +A +LL +V P Y
Sbjct: 288 IEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNT 347
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G +AF F+E++ + P+ Y TLI R G A EM + G
Sbjct: 348 LIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG 407
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
P F G G +A+++
Sbjct: 408 PDPDVFTFTTFVRGFCKMGNLPMAKEL 434
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 94/236 (39%), Gaps = 35/236 (14%)
Query: 4 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEF 63
+ P V + L+ GL G L+ A ++ ++MIK G DPD+ TF + + CK G +
Sbjct: 371 RSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPM 430
Query: 64 CVEMYYSV-------------------CKLGSCA----------------DVSTYKILIP 88
E++ + KLG + D+ TY + I
Sbjct: 431 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490
Query: 89 AVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+ K G + EA L+ ++ +G P Y II G A F E+ KG P
Sbjct: 491 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP 550
Query: 149 NRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 204
+ YT LI GR A + EM E G+ P ++ + +GL K D A
Sbjct: 551 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQA 606
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M + G P V + ++ G ++ A Q++ +M G P+ T+N L+ + SGE
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E E+ + +LG V TY LI + G I+EA RL ++ G P Y
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I+ G + G+ DA + K P+ Y TLI R G EA E+
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKIE 208
L P ++ + DGL G D+A +++
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLK 400
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNA-GYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSG 59
M KG P V+ + +++ L + ++ A+++ N M++ G P + T+N+++++ CK G
Sbjct: 157 MVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKG 216
Query: 60 EVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYA 119
V+ +++ + + +G + TY +L+ +S +G +++A L+ +++ G Y
Sbjct: 217 MVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYD 276
Query: 120 PIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEM 179
P+I+G +GQ ++A E+ +G P Y T++ + GR +A L M
Sbjct: 277 PLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNK 336
Query: 180 GLTPISRCFDLVTDGLKNCG 199
L P ++ + G G
Sbjct: 337 NLMPDLVSYNTLIYGYTRLG 356
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +G P V + ++ GL G + A+++++ M+ + PDL ++N+LI + G
Sbjct: 298 MLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGN 357
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ ++ + V TY LI + + G +D A RL +++ G +P +
Sbjct: 358 IGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTT 417
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
++G + G A F E+ +G P+R Y T I + G +A EM G
Sbjct: 418 FVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG 477
Query: 181 LTPISRCFDLVTDGLKNCG 199
P +++ DGL G
Sbjct: 478 FPPDLITYNVFIDGLHKLG 496
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 2/199 (1%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + G L G A M +M+ +G PDL T+N I+ + K G
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 497
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ E+ + G D TY +I A AG + +A L ++ G P Y
Sbjct: 498 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTV 557
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I RG+ A F E+ KG PN Y LI + + +A N+ EM G
Sbjct: 558 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG 617
Query: 181 LTPISRCFDLVTDGLKNCG 199
++P + ++ + +NC
Sbjct: 618 ISPNKYTYTILIN--ENCN 634
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G V D L++G G +E A ++ +M+ +G+ P + T+N+++ +CK G V
Sbjct: 267 GLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDA 326
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
++ + D+ +Y LI ++ G I EAF L L P Y +I G
Sbjct: 327 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDG 386
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
R G D A E+ G P+ +TT + + G A EM GL P
Sbjct: 387 LCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQP 445
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +K P + + L+ G G + A + ++ + P + T+N+LI+ +C+ G+
Sbjct: 333 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGD 392
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + + K G DV T+ + K G + A L ++ G P Y
Sbjct: 393 LDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYIT 452
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
I G + G AF E+ +G PP+ Y I + G EA+ + +M G
Sbjct: 453 RIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 512
Query: 181 LTP 183
L P
Sbjct: 513 LVP 515
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P V +L+ G L+ A +M ++G P++ T+N+LI +CK +
Sbjct: 543 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 602
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G + TY ILI G EA RL ++++ P +
Sbjct: 603 MDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRS 662
Query: 121 IIK 123
++K
Sbjct: 663 LLK 665
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 36/195 (18%)
Query: 14 DLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETIC-KSGEVEFCVEMYYSVC 72
DLL+ + LE + KM+ +G PD++ N ++ + + ++ E+Y +
Sbjct: 135 DLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMV 194
Query: 73 KLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFD 132
+ G C V TY ++ + K GM+ E
Sbjct: 195 ECGICPTVVTYNTMLDSFCKKGMVQE---------------------------------- 220
Query: 133 DAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVT 192
A +++ G PN Y L+ G +A + +M +GL +D +
Sbjct: 221 -ALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLI 279
Query: 193 DGLKNCGKHDLAEKI 207
G G+ + A ++
Sbjct: 280 RGYCEKGQIEEASRL 294
>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 376
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%)
Query: 10 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYY 69
V +++++GL N G ++ + M K G D T+ L+ CK+G+V + +
Sbjct: 59 VASFNIMMRGLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLE 118
Query: 70 SVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRG 129
G D Y +I + K +D+A +L+ +++ G P +Y +I G
Sbjct: 119 IAEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSS 178
Query: 130 QFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFD 189
+F+DA F E+ P Y TLI +G RF EA + + EM E G P +
Sbjct: 179 KFEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYS 238
Query: 190 LVTDGLKNCGKHDLAEKI 207
++ GL C K ++A ++
Sbjct: 239 MLIKGLCLCHKVEMALQL 256
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%)
Query: 16 LVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 75
++ GL L+ A ++N MIK G P+ +N+LI + S + E + ++ +
Sbjct: 135 MINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTH 194
Query: 76 SCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDAF 135
+ TY LI + K EA+ L+ ++E G NP Y+ +IKG + + A
Sbjct: 195 CSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMAL 254
Query: 136 CFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ ++ KG P+ ++ LI G+ A + +M P
Sbjct: 255 QLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAP 302
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M +KG+NP V +L++GL +E A Q+ ++ +G PD++ N LI +C G+
Sbjct: 225 MLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGK 284
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + +Y+ + ++ T+ L+ K G + A + ++ +G P Y
Sbjct: 285 MQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNI 344
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPP 148
+KG + A F + K P
Sbjct: 345 TLKGLCSCNRISGAILFLHDALTKKIVP 372
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M G P + L+ GL+ + E A ++ +M P + T+N+LI +CK
Sbjct: 155 MIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGER 214
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
++ + + G V TY +LI + ++ A +L + + G P ++
Sbjct: 215 FGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNI 274
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G G+ A + ++ PN + TL+ + G A + G
Sbjct: 275 LIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNG 334
Query: 181 LTPISRCFDLVTDGLKNCGK 200
L P +++ GL +C +
Sbjct: 335 LQPDIISYNITLKGLCSCNR 354
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Query: 56 CKSGEVEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFP 115
C+SG+++ +Y + + D Y ++ + G I + F L + ++G
Sbjct: 1 CESGDIDGAEMVYKDIVESKLSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEGSRNVA 60
Query: 116 SLYAPIIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLIT-MCGRGGRFVEAANYLM 174
S + +++G F G+ D+ + +K G + Y L+ C G V + +++
Sbjct: 61 S-FNIMMRGLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGD--VNKSLHVL 117
Query: 175 EMTEM 179
E+ EM
Sbjct: 118 EIAEM 122
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 2/204 (0%)
Query: 5 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFC 64
G P VR ++L+ G AG LE A + +M + PD+ +F+ LI + GE++
Sbjct: 259 GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHA 318
Query: 65 VEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKG 124
E + + G D Y ++I +AG++ EA R+ +V G P Y ++ G
Sbjct: 319 AEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378
Query: 125 AFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPI 184
+ + DA +E+K +G PP+ +TTLI R G +A + +++ L P
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438
Query: 185 SRCFDLVTDGLKNCGKHDLAEKIE 208
++ + DG+ C + DL + E
Sbjct: 439 IVTYNTLIDGM--CRQGDLGKANE 460
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V +++V AG +E+A +++ M+ +G P L T+NS+++ + ++G + E+
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ G DV ++ +LI +AG ++EA R + P ++ +I R
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
RG+ D A + E++ G P+ +YT +I R G +EA EM G P
Sbjct: 312 RGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371
Query: 188 FDLVTDGLKNCGKHDLAEKIEQL 210
++ + +GL C + L++ E L
Sbjct: 372 YNTLLNGL--CKERRLSDAEELL 392
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%)
Query: 8 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEM 67
P V + L+ GL L A++++N+M ++G PDL TF +LI C+ G +E ++
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426
Query: 68 YYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFR 127
+ ++ D+ TY LI + + G + +A L ++ P Y+ +I
Sbjct: 427 FDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCE 486
Query: 128 RGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRC 187
+GQ D+AF F E+ KG PN Y ++I R G + +L +M + P
Sbjct: 487 KGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLIT 546
Query: 188 FDLVTDGLKNCGK 200
++ + G GK
Sbjct: 547 YNTLIHGYVKEGK 559
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M ++G P + L+ G G +E A Q + + Q PD+ T+N+LI+ +C+ G+
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+ E++ + + TY ILI + + G +D AF L +V G P Y
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
IIKG R G F +++ P+ Y TLI + G+ EA N L M
Sbjct: 515 IIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENEN 574
Query: 181 LTPISRCFDLVTDGLKNCGKHDLAEKI 207
+ P + ++++ G G A+ +
Sbjct: 575 VQPDAVTYNMIISGFSVHGNMQEADWV 601
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
M KG P + + +++GLL G + A+++ M G PD+ +FN LI C++GE
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGE 279
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
+E + Y + DV ++ LI ++ G +D A L + E G P +Y
Sbjct: 280 LEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G R G +A E+ G P+ Y TL+ + R +A L EM E G
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 181 LTP 183
+ P
Sbjct: 400 VPP 402
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+L+ G +++A +++M+ +G P++ T+NS+I+ C+SG V + +
Sbjct: 479 ILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHD 538
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
D+ TY LI K G + EAF LL + + P Y II G G +A
Sbjct: 539 KVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEA 598
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTP 183
+ ++ +G P+R Y ++I G ++ EM + GL P
Sbjct: 599 DWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%)
Query: 15 LLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGEVEFCVEMYYSVCKL 74
+++ G AG + A ++ ++M+ G PD+ T+N+L+ +CK + E+ + +
Sbjct: 339 MVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER 398
Query: 75 GSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA 134
G D+ T+ LI + G I++A + + + P Y +I G R+G A
Sbjct: 399 GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKA 458
Query: 135 FCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMGLTPISRCFDLVTDG 194
+ ++ + PN Y+ LI G+ A +L EM G+ P ++ + G
Sbjct: 459 NELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKG 518
Query: 195 LKNCG 199
G
Sbjct: 519 YCRSG 523
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 41/215 (19%)
Query: 23 AGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKS---GEVEFCVEMYYSVCKLGSCAD 79
AG+ ++ S+ + T N ++ + CK+ GEV+ + C D
Sbjct: 137 AGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVF---PD 193
Query: 80 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAPIIKGAFRRGQFDDA----- 134
V T+ +++ A +AG ++ A L+ ++V G P Y ++KG R G++D A
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR 253
Query: 135 --------------------FC----------FFSEIKIKGHPPNRPVYTTLITMCGRGG 164
FC F+ E++ + P+ ++ LI + R G
Sbjct: 254 AMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRG 313
Query: 165 RFVEAANYLMEMTEMGLTPISRCFDLVTDGLKNCG 199
AA YL EM E GL P + +V G G
Sbjct: 314 EMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAG 348
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 79/183 (43%)
Query: 1 MSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGSDPDLETFNSLIETICKSGE 60
+SD+ P + + L+ G+ G L A ++ + M + P+ T++ LI++ C+ G+
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489
Query: 61 VEFCVEMYYSVCKLGSCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHNPFPSLYAP 120
V+ + G ++ TY +I ++G + + + L + D P Y
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNT 549
Query: 121 IIKGAFRRGQFDDAFCFFSEIKIKGHPPNRPVYTTLITMCGRGGRFVEAANYLMEMTEMG 180
+I G + G+ +AF ++ + P+ Y +I+ G EA +M G
Sbjct: 550 LIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARG 609
Query: 181 LTP 183
+ P
Sbjct: 610 IEP 612
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.140 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,466,377,421
Number of Sequences: 23463169
Number of extensions: 141433740
Number of successful extensions: 354009
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5330
Number of HSP's successfully gapped in prelim test: 3828
Number of HSP's that attempted gapping in prelim test: 284757
Number of HSP's gapped (non-prelim): 50032
length of query: 217
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 80
effective length of database: 9,144,741,214
effective search space: 731579297120
effective search space used: 731579297120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)