BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035649
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1
Length = 228
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 40/63 (63%), Gaps = 8/63 (12%)
Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVFA 80
PRVF C +C RKFYSSQALGGHQNAHK+ERT A++ + Y T SLP FA
Sbjct: 65 PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQY--------YKMTLSSLPSSAFA 116
Query: 81 PSH 83
H
Sbjct: 117 FGH 119
>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1
Length = 209
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAK---RVASDHLHQYASTTPSL 74
+++PRVF C +C RKFYSSQALGGHQNAHK+ERT A++A R+ H Y T+ SL
Sbjct: 53 EANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSL 112
>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2
Length = 260
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%)
Query: 20 SPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVA 60
S RVF C +C RKFYSSQALGGHQNAHK+ERT A++A R+
Sbjct: 81 SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMG 121
>sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1
Length = 150
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRV 59
PRVF C +C RKFYSSQALGGHQNAHK ERT A+K++ +
Sbjct: 49 PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87
>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1
SV=1
Length = 161
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASD 62
R+FPC +C RKFY+SQALGGHQNAHK+ER AAR+ V ++
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGVLAN 76
>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1
Length = 235
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVAS 61
++F C +C R FYSSQALGGHQNAHK+ERT A++ +R+A+
Sbjct: 59 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAA 98
>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1
Length = 197
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 19 SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMV 78
S R + C +C R+F +SQALGGHQNAHKKER ++A+ +A+ L ++ + P P++
Sbjct: 36 SESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLL 95
Query: 79 --FAPSHH 84
FAP H
Sbjct: 96 SAFAPLPH 103
>sp|Q6S591|JAG_ARATH Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2
SV=1
Length = 253
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER 50
D S +V+ C FCS KF SQALGGH N H++ER
Sbjct: 45 DESGKVYECRFCSLKFCKSQALGGHMNRHRQER 77
>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP
PE=1 SV=1
Length = 204
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAAR 54
PR + C FC R+F S+QALGGH N H+++R R
Sbjct: 44 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 77
>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis
thaliana GN=RBE PE=2 SV=2
Length = 226
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKER 50
PR + C FC R+F S+QALGGH N H+++R
Sbjct: 52 PRSYSCSFCGREFKSAQALGGHMNVHRRDR 81
>sp|Q9SR34|TAC1_ARATH Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2
SV=1
Length = 172
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 16 VDDS--SPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPS 73
VDDS R + C FC R F ++QALGGH N H+++R R +++ D+ + + +
Sbjct: 25 VDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR--QKLMEDNKDDVVAESDA 82
Query: 74 LPPMVFAPSHHHHHMGQQL 92
+ + G+ L
Sbjct: 83 SEVVSLDLNEQQQQQGEAL 101
>sp|Q9LG97|SL1_ORYSJ Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica
GN=SL1 PE=2 SV=1
Length = 263
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER 50
D + +V+ C FCS KF SQALGGH N H++ER
Sbjct: 52 DEAGKVYECRFCSLKFCKSQALGGHMNRHRQER 84
>sp|Q6S592|JGL_ARATH Zinc finger protein JAGGED-like OS=Arabidopsis thaliana GN=JGL PE=2
SV=1
Length = 207
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVFAP 81
+ + C FCS KF+ SQALGGH N H++ER K + S PP P
Sbjct: 48 KEYECRFCSLKFFKSQALGGHMNRHRQERETESLNK------ARELVLRNDSFPPHQGPP 101
Query: 82 SHHHH----HMGQQLMHPSSMYISAHSS 105
S +H H+G MY H S
Sbjct: 102 SFSYHQGDVHIGDLTQFKPMMYPPRHFS 129
>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1
Length = 286
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 9 KVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRV 59
K+S+E +SS V+ C C+R F S QALGGH+ +HKK RT+ + R+
Sbjct: 104 KISSE----NSSFYVYECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRL 150
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVAS 61
+N+ + + +V C C +F S QALGGH H RTA VA+
Sbjct: 180 SNIINKANKVHECSICGSEFTSGQALGGHMRRH---RTAVTTISPVAA 224
>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1
Length = 314
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 24 FPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVF 79
F C C + F S QALGGH+ +HKK + K ++V ++++ P+ F
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVHECPICF 249
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 9 KVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAAR 54
+V E + +V C C R F S QALGGH+ +H A R
Sbjct: 228 QVETEYVLGVKEKKVHECPICFRVFTSGQALGGHKRSHGSNIGAGR 273
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 24 FPCLFCSRKFYSSQALGGHQNAHKKERTAAR 54
+ C FC + F + +ALGGH +H +A R
Sbjct: 4 YKCRFCFKSFINGRALGGHMRSHMLTLSAER 34
>sp|Q42410|ZAT12_ARATH Zinc finger protein ZAT12 OS=Arabidopsis thaliana GN=ZAT12 PE=2
SV=1
Length = 162
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 12 AEANVDDS-SPRVFPCLFCSRKFYSSQALGGHQNAHKK 48
+ NVD RVF C C ++F+S QALGGH+ +HKK
Sbjct: 26 GQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKK 63
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 25 PCLFCSRKFYSSQALGGHQNAHKKERTAA 53
PC C +F QALGGH H+ E AA
Sbjct: 83 PCPICGVEFPMGQALGGHMRRHRNESGAA 111
>sp|Q39264|ZFP5_ARATH Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1
Length = 211
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 26 CLFCSRKFYSSQALGGHQNAH 46
C +C ++F +SQALGGHQNAH
Sbjct: 62 CQYCGKEFANSQALGGHQNAH 82
>sp|Q42453|ZAT7_ARATH Zinc finger protein ZAT7 OS=Arabidopsis thaliana GN=ZAT7 PE=2
SV=1
Length = 168
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKK 48
RVF C C ++F S QALGGH+ +HKK
Sbjct: 38 RVFRCKTCLKEFSSFQALGGHRASHKK 64
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 25 PCLFCSRKFYSSQALGGHQNAHKKERTAARKAKR 58
PC C KF QALGGH H+ E+ + R
Sbjct: 87 PCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTR 120
>sp|Q9LX85|ZAT8_ARATH Zinc finger protein ZAT8 OS=Arabidopsis thaliana GN=ZAT8 PE=2
SV=1
Length = 164
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKK 48
RVF C C ++F S QALGGH+ +HKK
Sbjct: 35 RVFRCKTCLKEFSSFQALGGHRASHKK 61
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 25 PCLFCSRKFYSSQALGGHQNAHKKER 50
PC C +F QALGGH H+ E+
Sbjct: 86 PCPICGVEFPMGQALGGHMRRHRSEK 111
>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1
Length = 288
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 24 FPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKR 58
+ C C + F S QALGGH+ +HKK R + K ++
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQ 207
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 15 NVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRV 59
NV + R+ C C R F S QALGGH+ +H + + +RV
Sbjct: 215 NVVVVAKRIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRRV 259
>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2
SV=1
Length = 178
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 24 FPCLFCSRKFYSSQALGGHQNAHKKERTAARK--AKRVASDH 63
F C C+++F S QALGGH+ +HKK + + K +++D+
Sbjct: 47 FECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDY 88
>sp|Q9SSW1|AZF1_ARATH Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1
Length = 245
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKK 48
R + C C + F S QALGGH+ +H+K
Sbjct: 95 RDYKCTVCGKSFSSYQALGGHKTSHRK 121
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 SPRVFPCLFCSRKFYSSQALGGHQNAH 46
S ++ C C + F S QALGGH+ H
Sbjct: 160 SGKIHTCSICFKSFASGQALGGHKRCH 186
>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1
Length = 267
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKK 48
+ F C C + F S QALGGH+ +HKK
Sbjct: 158 KWFECETCEKVFKSYQALGGHRASHKK 184
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 26 CLFCSRKFYSSQALGGHQNAH 46
C C++ F S QALGGH+ +H
Sbjct: 211 CPICAKVFTSGQALGGHKRSH 231
>sp|P33749|MSN4_YEAST Zinc finger protein MSN4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MSN4 PE=1 SV=1
Length = 630
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 19 SSPRVFPCLFCSRKFYSSQALGGHQNAHKK 48
S+ R F C+FC +KF S L H HKK
Sbjct: 597 STERPFACMFCEKKFSRSDNLSQHLKTHKK 626
>sp|O65499|ZAT3_ARATH Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=2 SV=1
Length = 284
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 17 DDSSPRVF-PCLFCSRKFYSSQALGGHQNAHKKER 50
D ++P++ PC C RKF+S +AL GH H + +
Sbjct: 69 DPNAPKITRPCTECGRKFWSWKALFGHMRCHPERQ 103
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 14/74 (18%)
Query: 19 SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMV 78
SS F C C + F S QALGGH+ +HK + +A T + PM
Sbjct: 157 SSIERFECGGCKKVFGSHQALGGHRASHKNVKGC--------------FAITNVTDDPMT 202
Query: 79 FAPSHHHHHMGQQL 92
+ S H H G+ L
Sbjct: 203 VSTSSGHDHQGKIL 216
>sp|Q504L7|ZN574_RAT Zinc finger protein 574 OS=Rattus norvegicus GN=Znf574 PE=2 SV=1
Length = 898
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 10 VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKER 50
VS E++ + ++P + CL CSR+F + L HQ H+ ER
Sbjct: 453 VSEESSAEPAAPGTYRCLLCSREFSKALQLTRHQRFVHRLER 494
>sp|Q42430|ZFP1_WHEAT Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1
Length = 261
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 11 SAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAH 46
S A+ D ++ RV C C ++F + QALGGH+ H
Sbjct: 147 STAASSDGATNRVHRCSICQKEFPTGQALGGHKRKH 182
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHK 47
P F C C + F S QALGGH+ +H+
Sbjct: 87 PAEFKCSVCGKSFSSYQALGGHKTSHR 113
>sp|P10925|ZFY1_MOUSE Zinc finger Y-chromosomal protein 1 OS=Mus musculus GN=Zfy1 PE=2
SV=3
Length = 782
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 17 DDSSPRVFPCLFCSRKFYSSQALGGHQNAH 46
D + RV+PC+FC +KF + + L H H
Sbjct: 396 DGQTLRVYPCMFCGKKFKTKRFLKRHTKNH 425
>sp|Q5L264|ADDB_GEOKA ATP-dependent helicase/deoxyribonuclease subunit B OS=Geobacillus
kaustophilus (strain HTA426) GN=addB PE=3 SV=1
Length = 1167
Score = 32.7 bits (73), Expect = 0.96, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 49 ERTAARKAKRVASDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMH---PSSMYISAHSS 105
ER +A +R+A P + V + SH + +M ++L H ++ +S H+
Sbjct: 860 ERLSAEAVERIA-----------PLIQQQVLSSSHRYEYMKRKLKHVVARTTHVLSEHAR 908
Query: 106 NFGYFPTQQHFASASDRSKSNGAAARFDHQNNTVNQIIGSVANADKGKDSK 156
G+ P + + + RF + TV +++G + DK + S+
Sbjct: 909 ASGFVPIGLELSFGPN---GDLPPLRFRLPDGTVMELVGRIDRVDKAESSQ 956
>sp|P20662|ZFY2_MOUSE Zinc finger Y-chromosomal protein 2 OS=Mus musculus GN=Zfy2 PE=2
SV=2
Length = 777
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 17 DDSSPRVFPCLFCSRKFYSSQALGGHQNAH 46
D + RV+PC+FC +KF + + L H H
Sbjct: 396 DGQTLRVYPCMFCGKKFKTKRFLKRHIKNH 425
>sp|Q9NSC2|SALL1_HUMAN Sal-like protein 1 OS=Homo sapiens GN=SALL1 PE=1 SV=2
Length = 1324
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVF 79
+ F C C R F + L H H T AR+ +R++ D + P P +F
Sbjct: 1160 KPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMF 1217
>sp|Q9ER74|SALL1_MOUSE Sal-like protein 1 OS=Mus musculus GN=Sall1 PE=1 SV=1
Length = 1322
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVF 79
+ F C C R F + L H H T AR+ +R++ D + P P +F
Sbjct: 1159 KPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMF 1216
>sp|Q2M1K9|ZN423_HUMAN Zinc finger protein 423 OS=Homo sapiens GN=ZNF423 PE=1 SV=1
Length = 1284
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 19 SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVAS--DHLHQYASTT 71
SS + F C C R F S+ +L H AHKK + K+++ A D + Y T
Sbjct: 217 SSSKPFKCTVCKRGFSSTSSLQSHMQAHKKNKEHLAKSEKEAKKDDFMCDYCEDT 271
>sp|Q80VM4|ZN579_MOUSE Zinc finger protein 579 OS=Mus musculus GN=Znf579 PE=1 SV=1
Length = 562
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 26/62 (41%)
Query: 14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPS 73
A V P PC C R+F + +L HQ H+ E A + A L AS +P
Sbjct: 429 AQVHAGGPAPHPCPRCPRRFSRAYSLLRHQRCHRAELERAELERAAALQELQTQASQSPQ 488
Query: 74 LP 75
P
Sbjct: 489 PP 490
>sp|O22533|ZAT6_ARATH Zinc finger protein ZAT6 OS=Arabidopsis thaliana GN=ZAT6 PE=2 SV=1
Length = 238
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 23 VFPCLFCSRKFYSSQALGGHQNAHKK 48
++ C C + F S QALGGH+ +H+K
Sbjct: 88 IYKCSVCDKAFSSYQALGGHKASHRK 113
>sp|A7TGW7|DBP10_VANPO ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP10 PE=3 SV=1
Length = 977
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 41 GHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSSMYI 100
G QN+ K ++ +K K AS+ L ST +VFAP+ HH QL+ S +
Sbjct: 392 GKQNSRKSKKGKFQKLKVSASNELPTEKST------IVFAPTRHHVEYITQLLKDSGFLV 445
Query: 101 S 101
S
Sbjct: 446 S 446
>sp|Q6PGE4|ZF316_MOUSE Zinc finger protein 316 OS=Mus musculus GN=Znf316 PE=2 SV=1
Length = 1016
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKKER 50
R +PCL C R F S AL HQ H +R
Sbjct: 450 RPYPCLHCGRSFSQSSALARHQAVHTADR 478
>sp|Q63755|PRDM2_RAT PR domain zinc finger protein 2 OS=Rattus norvegicus GN=Prdm2 PE=2
SV=1
Length = 1706
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 6 HRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAH 46
H + EAN D +FPC C RKF + Q L H + H
Sbjct: 337 HTPRAREEANGDVLETFMFPCQHCERKFATKQGLERHMHIH 377
>sp|Q29RK0|ZN574_BOVIN Zinc finger protein 574 OS=Bos taurus GN=ZNF574 PE=2 SV=1
Length = 896
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 10 VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKER 50
V+ E++ + ++P + CL CSR+F + L HQ H+ ER
Sbjct: 452 VAEESSAEPAAPGTYRCLLCSREFGKALQLTRHQRFVHRLER 493
>sp|O08961|ZN423_RAT Zinc finger protein 423 OS=Rattus norvegicus GN=Znf423 PE=1 SV=2
Length = 1311
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 19 SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVAS--DHLHQYASTT 71
SS + F C C R F S+ +L H AHKK + K+++ A D + Y T
Sbjct: 225 SSSKPFKCSVCKRGFSSTSSLQSHMQAHKKNKEHLAKSEKEAKKDDFMCDYCEDT 279
>sp|P33400|PACC_YEAST pH-response transcription factor pacC/RIM101 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RIM101 PE=1
SV=2
Length = 625
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 24 FPCLFCSRKFYSSQALGGHQNAH-------KKER-------TAARKAKRVASDHLHQYAS 69
F C CS+KF Q L H H K++R ++K K ASD + ++
Sbjct: 212 FGCSTCSKKFKRPQDLKKHLKIHLESGGILKRKRGPKWGSKRTSKKNKSCASDAVSSCSA 271
Query: 70 TTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQH 115
+ PS A S H Q++ P + IS H P+QQ
Sbjct: 272 SVPS----AIAGSFKSHSTSPQILPPLPVGISQH------LPSQQQ 307
>sp|Q8TD17|ZN398_HUMAN Zinc finger protein 398 OS=Homo sapiens GN=ZNF398 PE=2 SV=1
Length = 642
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 6 HRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER 50
H +++ V +S+ R FPC C ++F L H+ AH ER
Sbjct: 409 HPSRLTYHLRVHNSTERPFPCPDCPKRFADQARLTSHRRAHASER 453
>sp|Q80TS5|ZN423_MOUSE Zinc finger protein 423 OS=Mus musculus GN=Znf423 PE=1 SV=2
Length = 1292
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 19 SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVAS--DHLHQYASTT 71
SS + F C C R F S+ +L H AHKK + K+++ A D + Y T
Sbjct: 225 SSSKPFKCSVCKRGFSSTSSLQSHMQAHKKNKEHLAKSEKEAKKDDFMCDYCEDT 279
>sp|P18728|ZG53_XENLA Gastrula zinc finger protein XlCGF53.1 (Fragment) OS=Xenopus laevis
PE=2 SV=1
Length = 516
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 1 MGDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA 53
+G++H G++ E + FPC C ++F Q L HQ++H E+ A
Sbjct: 338 VGEEHAYGRIHTEE-------KPFPCSECGKRFARRQHLTDHQSSHTGEKPYA 383
>sp|Q9QXZ9|OPN4_MOUSE Melanopsin OS=Mus musculus GN=Opn4 PE=1 SV=1
Length = 521
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 19 SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMV 78
S PRV L F +S AL G N + A+ + HQ A+ P P V
Sbjct: 5 SGPRVLSSLTQDPSFTTSPALQGIWNGTQNVSVRAQLLSVSPTTSAHQAAAWVPF--PTV 62
Query: 79 FAPSHHHHHMGQQLM 93
P H H+ +G ++
Sbjct: 63 DVPDHAHYTLGTVIL 77
>sp|Q9SIJ0|ZAT2_ARATH Zinc finger protein ZAT2 OS=Arabidopsis thaliana GN=ZAT2 PE=2 SV=1
Length = 270
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 26 CLFCSRKFYSSQALGGHQNAH 46
C CSR F S QALGGH H
Sbjct: 213 CNICSRVFSSGQALGGHMRCH 233
>sp|Q5R4P8|ZN574_PONAB Zinc finger protein 574 OS=Pongo abelii GN=ZNF574 PE=2 SV=1
Length = 895
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 10 VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKER 50
VS E + ++P + CL CSR+F + L HQ H+ ER
Sbjct: 452 VSEETSAGPAAPGTYRCLLCSREFGKALQLTRHQRFVHRLER 493
>sp|Q6ZN55|ZN574_HUMAN Zinc finger protein 574 OS=Homo sapiens GN=ZNF574 PE=1 SV=2
Length = 896
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 10 VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKER 50
VS E + ++P + CL CSR+F + L HQ H+ ER
Sbjct: 452 VSEETSAGPAAPGTYRCLLCSREFGKALQLTRHQRFVHRLER 493
>sp|Q4R8S8|ZN574_MACFA Zinc finger protein 574 OS=Macaca fascicularis GN=ZNF574 PE=2 SV=2
Length = 896
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 10 VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKER 50
VS E + ++P + CL CSR+F + L HQ H+ ER
Sbjct: 452 VSEETSAGPAAPGTYRCLLCSREFGKALQLTRHQRFVHRLER 493
>sp|A5E2Y4|PAN3_LODEL PAB-dependent poly(A)-specific ribonuclease subunit PAN3
OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAN3 PE=3
SV=1
Length = 794
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 60 ASDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHFA 117
AS + QY P+ PP + P+ + QQL P+ + S H N T QH +
Sbjct: 321 ASMYPLQYHLYAPAPPPRLAVPTKEYETDSQQLFLPNELRESLHRKNEASLQTMQHLS 378
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.126 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,199,014
Number of Sequences: 539616
Number of extensions: 2130617
Number of successful extensions: 13778
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 13027
Number of HSP's gapped (non-prelim): 777
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)