BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035650
         (211 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|B4S3B3|KATG_PROA2 Catalase-peroxidase OS=Prosthecochloris aestuarii (strain DSM 271 /
           SK 413) GN=katG PE=3 SV=1
          Length = 732

 Score = 34.3 bits (77), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 27  ERVRQSRNGASSGKKATWIVELVENKGNVIRLRSCYGKYLTASNIPFLLGMTGNKVVQAV 86
           E +R + NG  SG K   + +++   G    +    GK  T   +PF  G T      A+
Sbjct: 513 EEIRNTFNGEQSGNKQVSLADMI-VLGGCAAVEEAAGKAGTGVTVPFTPGRT-----DAL 566

Query: 87  PEEKNMDWIFQWEPIRDGFQIKLK 110
            E+ + +     EP+ DGF+  +K
Sbjct: 567 QEQTDTESFSVLEPLADGFRNYMK 590


>sp|Q99973|TEP1_HUMAN Telomerase protein component 1 OS=Homo sapiens GN=TEP1 PE=1 SV=2
          Length = 2627

 Score = 30.8 bits (68), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 145  LWDVESVELPETGSFLEYLSSVSSFSSVSDDVLDVLSDGAL 185
            LWD ES +    G FL + S+VS+ ++V + V+ V  DG L
Sbjct: 2132 LWDPESGQ--RLGQFLGHQSAVSAVAAVEEHVVSVSRDGTL 2170


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.132    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,634,432
Number of Sequences: 539616
Number of extensions: 3557406
Number of successful extensions: 6546
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6544
Number of HSP's gapped (non-prelim): 9
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)